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Conserved domains on  [gi|1003088829|ref|NP_001307670|]
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protein FAM107B isoform c [Homo sapiens]

Protein Classification

protein FAM107A/FAM107B( domain architecture ID 10535143)

protein FAM107A/FAM107B may play a role in tumor development

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1151 pfam06625
Protein of unknown function (DUF1151); This family consists of several hypothetical eukaryotic ...
 51-159 6.45e-43

Protein of unknown function (DUF1151); This family consists of several hypothetical eukaryotic proteins of unknown function.


:

Pssm-ID: 461966  Cd Length: 111  Bit Score: 138.55  E-value: 6.45e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1003088829  51 PELIRPQKLINPVKTSRNHQDLHRELLMNQKRGLAPQNKPELQKVMEKRKRDQVIKQK--EEEAQKKKSDLEIELLKRQQ 128
Cdd:pfam06625   1 DGLIKPKKLANPVKASPSHQELHRELLFNHKRGLVLEQKPELQRVLEKRKRDQVLKQKkeEEEAKRKRSDLEQELLKRQQ 80

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1003088829 129 KLEQLELEKQKLQEEQENAPEFVKVKGNLRR 159
Cdd:pfam06625  81 RLEELEKEQEKQREEQENNPEFVRVRENLRR 111
 
Name Accession Description Interval E-value
DUF1151 pfam06625
Protein of unknown function (DUF1151); This family consists of several hypothetical eukaryotic ...
 51-159 6.45e-43

Protein of unknown function (DUF1151); This family consists of several hypothetical eukaryotic proteins of unknown function.


Pssm-ID: 461966  Cd Length: 111  Bit Score: 138.55  E-value: 6.45e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1003088829  51 PELIRPQKLINPVKTSRNHQDLHRELLMNQKRGLAPQNKPELQKVMEKRKRDQVIKQK--EEEAQKKKSDLEIELLKRQQ 128
Cdd:pfam06625   1 DGLIKPKKLANPVKASPSHQELHRELLFNHKRGLVLEQKPELQRVLEKRKRDQVLKQKkeEEEAKRKRSDLEQELLKRQQ 80

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1003088829 129 KLEQLELEKQKLQEEQENAPEFVKVKGNLRR 159
Cdd:pfam06625  81 RLEELEKEQEKQREEQENNPEFVRVRENLRR 111
PRK12704 PRK12704
phosphodiesterase; Provisional
 91-146 5.30e-03

phosphodiesterase; Provisional


Pssm-ID: 237177 [Multi-domain]  Cd Length: 520  Bit Score: 36.29  E-value: 5.30e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1003088829  91 ELQKVMEKRKRDQVIKQKEEeAQKKKSDLEIELLKRQQKLEQLElekQKLQEEQEN 146
Cdd:PRK12704   46 EAKKEAEAIKKEALLEAKEE-IHKLRNEFEKELRERRNELQKLE---KRLLQKEEN 97
 
Name Accession Description Interval E-value
DUF1151 pfam06625
Protein of unknown function (DUF1151); This family consists of several hypothetical eukaryotic ...
 51-159 6.45e-43

Protein of unknown function (DUF1151); This family consists of several hypothetical eukaryotic proteins of unknown function.


Pssm-ID: 461966  Cd Length: 111  Bit Score: 138.55  E-value: 6.45e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1003088829  51 PELIRPQKLINPVKTSRNHQDLHRELLMNQKRGLAPQNKPELQKVMEKRKRDQVIKQK--EEEAQKKKSDLEIELLKRQQ 128
Cdd:pfam06625   1 DGLIKPKKLANPVKASPSHQELHRELLFNHKRGLVLEQKPELQRVLEKRKRDQVLKQKkeEEEAKRKRSDLEQELLKRQQ 80

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1003088829 129 KLEQLELEKQKLQEEQENAPEFVKVKGNLRR 159
Cdd:pfam06625  81 RLEELEKEQEKQREEQENNPEFVRVRENLRR 111
PRK12704 PRK12704
phosphodiesterase; Provisional
 91-146 5.30e-03

phosphodiesterase; Provisional


Pssm-ID: 237177 [Multi-domain]  Cd Length: 520  Bit Score: 36.29  E-value: 5.30e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1003088829  91 ELQKVMEKRKRDQVIKQKEEeAQKKKSDLEIELLKRQQKLEQLElekQKLQEEQEN 146
Cdd:PRK12704   46 EAKKEAEAIKKEALLEAKEE-IHKLRNEFEKELRERRNELQKLE---KRLLQKEEN 97
PRK12704 PRK12704
phosphodiesterase; Provisional
 91-145 7.21e-03

phosphodiesterase; Provisional


Pssm-ID: 237177 [Multi-domain]  Cd Length: 520  Bit Score: 35.91  E-value: 7.21e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1003088829  91 ELQKvMEKR--KRDQVIKQKEEEAQKKKSDLEI---ELLKRQQKLEQLELEKQKLQEEQE 145
Cdd:PRK12704   83 ELQK-LEKRllQKEENLDRKLELLEKREEELEKkekELEQKQQELEKKEEELEELIEEQL 141
tolA PRK09510
cell envelope integrity inner membrane protein TolA; Provisional
 106-149 8.28e-03

cell envelope integrity inner membrane protein TolA; Provisional


Pssm-ID: 236545 [Multi-domain]  Cd Length: 387  Bit Score: 35.94  E-value: 8.28e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 1003088829 106 KQKEEEAQKKKSDLEIELLKRQQKLEQLELEKQKLQEEQENAPE 149
Cdd:PRK09510   79 EQRKKKEQQQAEELQQKQAAEQERLKQLEKERLAAQEQKKQAEE 122
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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