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Conserved domains on  [gi|1016841188|ref|NP_001309342|]
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arginine/serine-rich protein PNISR isoform b [Homo sapiens]

Protein Classification

PNISR domain-containing protein( domain architecture ID 12175673)

PNISR domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PNISR pfam15996
Arginine/serine-rich protein PNISR;
223-380 7.27e-59

Arginine/serine-rich protein PNISR;


:

Pssm-ID: 464963 [Multi-domain]  Cd Length: 179  Bit Score: 198.03  E-value: 7.27e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016841188 223 QIDAVKRRTLPAWIREGLEKMEREKQKKLEKERMEQQRSQLSKKEKKATE-DAEGGDGPRLPQRSKFDSDEEEEDTENVE 301
Cdd:pfam15996   1 TIDAAKRKTLPAWIREGLEKMEREKQKKLERERMEKERAEMAKEEKKESSkTLEEGDGPRLPSKSKFDSDDEDVDEEESD 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016841188 302 AASSGKV-----TRSPSPVPQEEHSDPE-MTEEEKEYQMMLLTKMLLTEILLDVTDEEIYYVAKDAHRK----ATKAPAK 371
Cdd:pfam15996  81 EDVSSGKseilnSRSPSPAPNEEQSEPErKTEEEKEEDLMLLTRKLLTEILLDVTNEEIYAVAKEVHRKhrakATKAPAK 160

                  ....*....
gi 1016841188 372 QLAQSSALA 380
Cdd:pfam15996 161 QLAQSSALA 169
 
Name Accession Description Interval E-value
PNISR pfam15996
Arginine/serine-rich protein PNISR;
223-380 7.27e-59

Arginine/serine-rich protein PNISR;


Pssm-ID: 464963 [Multi-domain]  Cd Length: 179  Bit Score: 198.03  E-value: 7.27e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016841188 223 QIDAVKRRTLPAWIREGLEKMEREKQKKLEKERMEQQRSQLSKKEKKATE-DAEGGDGPRLPQRSKFDSDEEEEDTENVE 301
Cdd:pfam15996   1 TIDAAKRKTLPAWIREGLEKMEREKQKKLERERMEKERAEMAKEEKKESSkTLEEGDGPRLPSKSKFDSDDEDVDEEESD 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016841188 302 AASSGKV-----TRSPSPVPQEEHSDPE-MTEEEKEYQMMLLTKMLLTEILLDVTDEEIYYVAKDAHRK----ATKAPAK 371
Cdd:pfam15996  81 EDVSSGKseilnSRSPSPAPNEEQSEPErKTEEEKEEDLMLLTRKLLTEILLDVTNEEIYAVAKEVHRKhrakATKAPAK 160

                  ....*....
gi 1016841188 372 QLAQSSALA 380
Cdd:pfam15996 161 QLAQSSALA 169
 
Name Accession Description Interval E-value
PNISR pfam15996
Arginine/serine-rich protein PNISR;
223-380 7.27e-59

Arginine/serine-rich protein PNISR;


Pssm-ID: 464963 [Multi-domain]  Cd Length: 179  Bit Score: 198.03  E-value: 7.27e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016841188 223 QIDAVKRRTLPAWIREGLEKMEREKQKKLEKERMEQQRSQLSKKEKKATE-DAEGGDGPRLPQRSKFDSDEEEEDTENVE 301
Cdd:pfam15996   1 TIDAAKRKTLPAWIREGLEKMEREKQKKLERERMEKERAEMAKEEKKESSkTLEEGDGPRLPSKSKFDSDDEDVDEEESD 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1016841188 302 AASSGKV-----TRSPSPVPQEEHSDPE-MTEEEKEYQMMLLTKMLLTEILLDVTDEEIYYVAKDAHRK----ATKAPAK 371
Cdd:pfam15996  81 EDVSSGKseilnSRSPSPAPNEEQSEPErKTEEEKEEDLMLLTRKLLTEILLDVTNEEIYAVAKEVHRKhrakATKAPAK 160

                  ....*....
gi 1016841188 372 QLAQSSALA 380
Cdd:pfam15996 161 QLAQSSALA 169
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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