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Conserved domains on  [gi|1243457503|ref|NP_001342450|]
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small ribosomal subunit protein eS21 [Mus musculus]

Protein Classification

40S ribosomal protein S21( domain architecture ID 10472478)

40S ribosomal protein S21 is involved in the regulation of protein synthesis and cell growth

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Ribosomal_S21e pfam01249
Ribosomal protein S21e;
1-80 2.49e-53

Ribosomal protein S21e;


:

Pssm-ID: 460133  Cd Length: 79  Bit Score: 160.00  E-value: 2.49e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1243457503  1 MQNDAGEFVDLYVPRKCSASNRIIAAKDHASIQMNVAEVDrTTGRFNGQFKTYGICGAIRRMGESDDSILRLAKADGIVS 80
Cdd:pfam01249  1 MQNDAGELVDLYIPRKCSATNRLITAKDHASVQINVAEVD-ENGRMTGQFTTYALCGYIRRMGESDDALNRLAQKDGLLK 79
 
Name Accession Description Interval E-value
Ribosomal_S21e pfam01249
Ribosomal protein S21e;
1-80 2.49e-53

Ribosomal protein S21e;


Pssm-ID: 460133  Cd Length: 79  Bit Score: 160.00  E-value: 2.49e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1243457503  1 MQNDAGEFVDLYVPRKCSASNRIIAAKDHASIQMNVAEVDrTTGRFNGQFKTYGICGAIRRMGESDDSILRLAKADGIVS 80
Cdd:pfam01249  1 MQNDAGELVDLYIPRKCSATNRLITAKDHASVQINVAEVD-ENGRMTGQFTTYALCGYIRRMGESDDALNRLAQKDGLLK 79
 
Name Accession Description Interval E-value
Ribosomal_S21e pfam01249
Ribosomal protein S21e;
1-80 2.49e-53

Ribosomal protein S21e;


Pssm-ID: 460133  Cd Length: 79  Bit Score: 160.00  E-value: 2.49e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1243457503  1 MQNDAGEFVDLYVPRKCSASNRIIAAKDHASIQMNVAEVDrTTGRFNGQFKTYGICGAIRRMGESDDSILRLAKADGIVS 80
Cdd:pfam01249  1 MQNDAGELVDLYIPRKCSATNRLITAKDHASVQINVAEVD-ENGRMTGQFTTYALCGYIRRMGESDDALNRLAQKDGLLK 79
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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