fibronectin isoform 3 preproprotein [Homo sapiens]
List of domain hits
Name | Accession | Description | Interval | E-value | ||||||||
FN2 | smart00059 | Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, ... |
353-401 | 5.10e-24 | ||||||||
Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, fibronectin. Also occurs in coagulation factor XII, 2 type IV collagenases, PDC-109, and cation-independent mannose-6-phosphate and secretory phospholipase A2 receptors. In fibronectin, PDC-109, and the collagenases, this domain contributes to collagen-binding function. : Pssm-ID: 128373 Cd Length: 49 Bit Score: 96.60 E-value: 5.10e-24
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FN2 | smart00059 | Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, ... |
413-461 | 2.52e-23 | ||||||||
Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, fibronectin. Also occurs in coagulation factor XII, 2 type IV collagenases, PDC-109, and cation-independent mannose-6-phosphate and secretory phospholipase A2 receptors. In fibronectin, PDC-109, and the collagenases, this domain contributes to collagen-binding function. : Pssm-ID: 128373 Cd Length: 49 Bit Score: 94.67 E-value: 2.52e-23
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fn3 | pfam00041 | Fibronectin type III domain; |
1449-1530 | 5.90e-21 | ||||||||
Fibronectin type III domain; : Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 89.01 E-value: 5.90e-21
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FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1904-1984 | 2.02e-17 | ||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. : Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 79.46 E-value: 2.02e-17
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fn3 | pfam00041 | Fibronectin type III domain; |
1268-1349 | 4.57e-17 | ||||||||
Fibronectin type III domain; : Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 77.84 E-value: 4.57e-17
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fn3 | pfam00041 | Fibronectin type III domain; |
1543-1623 | 1.99e-16 | ||||||||
Fibronectin type III domain; : Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 76.30 E-value: 1.99e-16
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FN3 | COG3401 | Fibronectin type 3 domain [General function prediction only]; |
1058-1538 | 2.64e-16 | ||||||||
Fibronectin type 3 domain [General function prediction only]; : Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 85.05 E-value: 2.64e-16
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FN3 | COG3401 | Fibronectin type 3 domain [General function prediction only]; |
1401-1857 | 8.46e-16 | ||||||||
Fibronectin type 3 domain [General function prediction only]; : Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 83.51 E-value: 8.46e-16
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FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
186-230 | 2.49e-15 | ||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. : Pssm-ID: 214494 Cd Length: 45 Bit Score: 71.61 E-value: 2.49e-15
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FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
561-604 | 2.85e-15 | ||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. : Pssm-ID: 214494 Cd Length: 45 Bit Score: 71.61 E-value: 2.85e-15
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FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
2175-2219 | 4.88e-15 | ||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. : Pssm-ID: 214494 Cd Length: 45 Bit Score: 70.84 E-value: 4.88e-15
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FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
2220-2261 | 5.54e-15 | ||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. : Pssm-ID: 214494 Cd Length: 45 Bit Score: 70.84 E-value: 5.54e-15
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fn3 | pfam00041 | Fibronectin type III domain; |
812-883 | 1.00e-14 | ||||||||
Fibronectin type III domain; : Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 71.29 E-value: 1.00e-14
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FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
470-508 | 1.33e-14 | ||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. : Pssm-ID: 214494 Cd Length: 45 Bit Score: 69.69 E-value: 1.33e-14
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fn1 | pfam00039 | Fibronectin type I domain; |
231-270 | 1.40e-14 | ||||||||
Fibronectin type I domain; : Pssm-ID: 459644 Cd Length: 40 Bit Score: 69.26 E-value: 1.40e-14
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FN3 super family | cl27307 | Fibronectin type 3 domain [General function prediction only]; |
711-1034 | 3.33e-14 | ||||||||
Fibronectin type 3 domain [General function prediction only]; The actual alignment was detected with superfamily member COG3401: Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 78.51 E-value: 3.33e-14
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FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
518-560 | 1.02e-13 | ||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. : Pssm-ID: 214494 Cd Length: 45 Bit Score: 66.99 E-value: 1.02e-13
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FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
97-140 | 2.52e-12 | ||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. : Pssm-ID: 214494 Cd Length: 45 Bit Score: 63.14 E-value: 2.52e-12
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FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
141-184 | 3.80e-12 | ||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. : Pssm-ID: 214494 Cd Length: 45 Bit Score: 62.75 E-value: 3.80e-12
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FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
2263-2302 | 1.09e-11 | ||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. : Pssm-ID: 238018 Cd Length: 43 Bit Score: 61.19 E-value: 1.09e-11
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fn3 | pfam00041 | Fibronectin type III domain; |
619-688 | 2.42e-11 | ||||||||
Fibronectin type III domain; : Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 61.66 E-value: 2.42e-11
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FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
52-89 | 1.05e-10 | ||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. : Pssm-ID: 238018 Cd Length: 43 Bit Score: 58.50 E-value: 1.05e-10
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fn3 | pfam00041 | Fibronectin type III domain; |
2075-2147 | 7.48e-07 | ||||||||
Fibronectin type III domain; : Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 48.95 E-value: 7.48e-07
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FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
307-345 | 7.19e-06 | ||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. : Pssm-ID: 238018 Cd Length: 43 Bit Score: 45.02 E-value: 7.19e-06
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Name | Accession | Description | Interval | E-value | ||||||||
FN2 | smart00059 | Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, ... |
353-401 | 5.10e-24 | ||||||||
Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, fibronectin. Also occurs in coagulation factor XII, 2 type IV collagenases, PDC-109, and cation-independent mannose-6-phosphate and secretory phospholipase A2 receptors. In fibronectin, PDC-109, and the collagenases, this domain contributes to collagen-binding function. Pssm-ID: 128373 Cd Length: 49 Bit Score: 96.60 E-value: 5.10e-24
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FN2 | smart00059 | Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, ... |
413-461 | 2.52e-23 | ||||||||
Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, fibronectin. Also occurs in coagulation factor XII, 2 type IV collagenases, PDC-109, and cation-independent mannose-6-phosphate and secretory phospholipase A2 receptors. In fibronectin, PDC-109, and the collagenases, this domain contributes to collagen-binding function. Pssm-ID: 128373 Cd Length: 49 Bit Score: 94.67 E-value: 2.52e-23
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FN2 | cd00062 | Fibronectin Type II domain: FN2 is one of three types of internal repeats which combine to ... |
354-401 | 2.10e-22 | ||||||||
Fibronectin Type II domain: FN2 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. Fibronectin is composed of 3 types of modules, FN1,FN2 and FN3. The collagen binding domain contains four FN1 and two FN2 repeats. Pssm-ID: 238019 Cd Length: 48 Bit Score: 91.98 E-value: 2.10e-22
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FN2 | cd00062 | Fibronectin Type II domain: FN2 is one of three types of internal repeats which combine to ... |
414-461 | 2.39e-22 | ||||||||
Fibronectin Type II domain: FN2 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. Fibronectin is composed of 3 types of modules, FN1,FN2 and FN3. The collagen binding domain contains four FN1 and two FN2 repeats. Pssm-ID: 238019 Cd Length: 48 Bit Score: 91.60 E-value: 2.39e-22
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fn3 | pfam00041 | Fibronectin type III domain; |
1449-1530 | 5.90e-21 | ||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 89.01 E-value: 5.90e-21
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fn2 | pfam00040 | Fibronectin type II domain; |
360-401 | 2.11e-20 | ||||||||
Fibronectin type II domain; Pssm-ID: 459645 Cd Length: 42 Bit Score: 86.08 E-value: 2.11e-20
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fn2 | pfam00040 | Fibronectin type II domain; |
420-461 | 1.61e-18 | ||||||||
Fibronectin type II domain; Pssm-ID: 459645 Cd Length: 42 Bit Score: 80.69 E-value: 1.61e-18
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FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1904-1984 | 2.02e-17 | ||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 79.46 E-value: 2.02e-17
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fn3 | pfam00041 | Fibronectin type III domain; |
1268-1349 | 4.57e-17 | ||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 77.84 E-value: 4.57e-17
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fn3 | pfam00041 | Fibronectin type III domain; |
1543-1623 | 1.99e-16 | ||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 76.30 E-value: 1.99e-16
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FN3 | COG3401 | Fibronectin type 3 domain [General function prediction only]; |
1058-1538 | 2.64e-16 | ||||||||
Fibronectin type 3 domain [General function prediction only]; Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 85.05 E-value: 2.64e-16
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fn3 | pfam00041 | Fibronectin type III domain; |
1904-1984 | 5.76e-16 | ||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 74.76 E-value: 5.76e-16
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fn3 | pfam00041 | Fibronectin type III domain; |
1359-1438 | 5.93e-16 | ||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 74.76 E-value: 5.93e-16
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FN3 | COG3401 | Fibronectin type 3 domain [General function prediction only]; |
1401-1857 | 8.46e-16 | ||||||||
Fibronectin type 3 domain [General function prediction only]; Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 83.51 E-value: 8.46e-16
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FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1449-1531 | 1.68e-15 | ||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 73.68 E-value: 1.68e-15
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fn3 | pfam00041 | Fibronectin type III domain; |
1723-1803 | 2.00e-15 | ||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 73.22 E-value: 2.00e-15
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FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
186-230 | 2.49e-15 | ||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 71.61 E-value: 2.49e-15
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FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
561-604 | 2.85e-15 | ||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 71.61 E-value: 2.85e-15
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FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
2175-2219 | 4.88e-15 | ||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 70.84 E-value: 4.88e-15
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FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
2220-2261 | 5.54e-15 | ||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 70.84 E-value: 5.54e-15
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fn3 | pfam00041 | Fibronectin type III domain; |
812-883 | 1.00e-14 | ||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 71.29 E-value: 1.00e-14
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FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
470-508 | 1.33e-14 | ||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 69.69 E-value: 1.33e-14
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fn1 | pfam00039 | Fibronectin type I domain; |
231-270 | 1.40e-14 | ||||||||
Fibronectin type I domain; Pssm-ID: 459644 Cd Length: 40 Bit Score: 69.26 E-value: 1.40e-14
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FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
231-275 | 1.68e-14 | ||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 69.30 E-value: 1.68e-14
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FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
811-899 | 2.39e-14 | ||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 70.60 E-value: 2.39e-14
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FN3 | COG3401 | Fibronectin type 3 domain [General function prediction only]; |
711-1034 | 3.33e-14 | ||||||||
Fibronectin type 3 domain [General function prediction only]; Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 78.51 E-value: 3.33e-14
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FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
518-560 | 1.02e-13 | ||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 66.99 E-value: 1.02e-13
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FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1268-1347 | 1.18e-13 | ||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 68.41 E-value: 1.18e-13
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FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1543-1630 | 1.33e-13 | ||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 68.29 E-value: 1.33e-13
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fn3 | pfam00041 | Fibronectin type III domain; |
908-988 | 1.42e-13 | ||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 68.21 E-value: 1.42e-13
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fn1 | pfam00039 | Fibronectin type I domain; |
470-508 | 1.46e-13 | ||||||||
Fibronectin type I domain; Pssm-ID: 459644 Cd Length: 40 Bit Score: 66.57 E-value: 1.46e-13
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FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1268-1349 | 1.87e-13 | ||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 67.91 E-value: 1.87e-13
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fn1 | pfam00039 | Fibronectin type I domain; |
561-599 | 2.75e-13 | ||||||||
Fibronectin type I domain; Pssm-ID: 459644 Cd Length: 40 Bit Score: 65.80 E-value: 2.75e-13
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FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1359-1438 | 3.81e-13 | ||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 67.14 E-value: 3.81e-13
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FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
559-602 | 5.69e-13 | ||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 65.05 E-value: 5.69e-13
|
||||||||||||
FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1451-1527 | 9.31e-13 | ||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 65.71 E-value: 9.31e-13
|
||||||||||||
fn1 | pfam00039 | Fibronectin type I domain; |
186-225 | 9.41e-13 | ||||||||
Fibronectin type I domain; Pssm-ID: 459644 Cd Length: 40 Bit Score: 64.26 E-value: 9.41e-13
|
||||||||||||
fn1 | pfam00039 | Fibronectin type I domain; |
2175-2214 | 1.39e-12 | ||||||||
Fibronectin type I domain; Pssm-ID: 459644 Cd Length: 40 Bit Score: 63.87 E-value: 1.39e-12
|
||||||||||||
FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1904-1982 | 1.42e-12 | ||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 65.33 E-value: 1.42e-12
|
||||||||||||
FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
97-140 | 2.52e-12 | ||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 63.14 E-value: 2.52e-12
|
||||||||||||
fn1 | pfam00039 | Fibronectin type I domain; |
97-135 | 3.62e-12 | ||||||||
Fibronectin type I domain; Pssm-ID: 459644 Cd Length: 40 Bit Score: 62.72 E-value: 3.62e-12
|
||||||||||||
FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
141-184 | 3.80e-12 | ||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 62.75 E-value: 3.80e-12
|
||||||||||||
FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
811-889 | 7.58e-12 | ||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 63.02 E-value: 7.58e-12
|
||||||||||||
FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
2263-2302 | 1.09e-11 | ||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 61.19 E-value: 1.09e-11
|
||||||||||||
FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
95-136 | 1.18e-11 | ||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 61.19 E-value: 1.18e-11
|
||||||||||||
FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
2173-2217 | 1.56e-11 | ||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 60.81 E-value: 1.56e-11
|
||||||||||||
FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
910-995 | 1.80e-11 | ||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 62.51 E-value: 1.80e-11
|
||||||||||||
fn1 | pfam00039 | Fibronectin type I domain; |
2220-2257 | 2.29e-11 | ||||||||
Fibronectin type I domain; Pssm-ID: 459644 Cd Length: 40 Bit Score: 60.41 E-value: 2.29e-11
|
||||||||||||
fn3 | pfam00041 | Fibronectin type III domain; |
619-688 | 2.42e-11 | ||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 61.66 E-value: 2.42e-11
|
||||||||||||
FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1723-1810 | 4.97e-11 | ||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 60.97 E-value: 4.97e-11
|
||||||||||||
FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
184-227 | 6.01e-11 | ||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 59.27 E-value: 6.01e-11
|
||||||||||||
FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
52-89 | 1.05e-10 | ||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 58.50 E-value: 1.05e-10
|
||||||||||||
fn1 | pfam00039 | Fibronectin type I domain; |
141-179 | 1.65e-10 | ||||||||
Fibronectin type I domain; Pssm-ID: 459644 Cd Length: 40 Bit Score: 57.71 E-value: 1.65e-10
|
||||||||||||
FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1543-1621 | 1.79e-10 | ||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 59.17 E-value: 1.79e-10
|
||||||||||||
FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1359-1437 | 1.86e-10 | ||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 59.17 E-value: 1.86e-10
|
||||||||||||
FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
2264-2304 | 3.06e-10 | ||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 57.36 E-value: 3.06e-10
|
||||||||||||
FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
468-508 | 3.39e-10 | ||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 56.96 E-value: 3.39e-10
|
||||||||||||
fn1 | pfam00039 | Fibronectin type I domain; |
524-555 | 4.52e-10 | ||||||||
Fibronectin type I domain; Pssm-ID: 459644 Cd Length: 40 Bit Score: 56.55 E-value: 4.52e-10
|
||||||||||||
FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
2219-2260 | 8.93e-10 | ||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 55.80 E-value: 8.93e-10
|
||||||||||||
FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
229-273 | 1.56e-09 | ||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 55.03 E-value: 1.56e-09
|
||||||||||||
FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
52-92 | 4.51e-09 | ||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 53.89 E-value: 4.51e-09
|
||||||||||||
FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1723-1794 | 9.25e-09 | ||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 54.54 E-value: 9.25e-09
|
||||||||||||
FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
139-181 | 1.24e-08 | ||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 52.72 E-value: 1.24e-08
|
||||||||||||
FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
516-558 | 1.60e-08 | ||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 52.33 E-value: 1.60e-08
|
||||||||||||
FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
908-986 | 2.41e-08 | ||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 53.00 E-value: 2.41e-08
|
||||||||||||
fn1 | pfam00039 | Fibronectin type I domain; |
2264-2299 | 6.33e-08 | ||||||||
Fibronectin type I domain; Pssm-ID: 459644 Cd Length: 40 Bit Score: 50.39 E-value: 6.33e-08
|
||||||||||||
fn1 | pfam00039 | Fibronectin type I domain; |
52-87 | 1.54e-07 | ||||||||
Fibronectin type I domain; Pssm-ID: 459644 Cd Length: 40 Bit Score: 49.62 E-value: 1.54e-07
|
||||||||||||
fn3 | pfam00041 | Fibronectin type III domain; |
2075-2147 | 7.48e-07 | ||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 48.95 E-value: 7.48e-07
|
||||||||||||
COG4733 | COG4733 | Phage-related protein, tail protein J [Mobilome: prophages, transposons]; |
1785-1973 | 2.25e-06 | ||||||||
Phage-related protein, tail protein J [Mobilome: prophages, transposons]; Pssm-ID: 443767 [Multi-domain] Cd Length: 978 Bit Score: 53.41 E-value: 2.25e-06
|
||||||||||||
FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
307-345 | 7.19e-06 | ||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 45.02 E-value: 7.19e-06
|
||||||||||||
FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
616-688 | 1.23e-05 | ||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 45.68 E-value: 1.23e-05
|
||||||||||||
FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
308-347 | 1.32e-05 | ||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 44.26 E-value: 1.32e-05
|
||||||||||||
FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
628-678 | 1.29e-04 | ||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 42.87 E-value: 1.29e-04
|
||||||||||||
FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
2077-2143 | 5.94e-03 | ||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 37.98 E-value: 5.94e-03
|
||||||||||||
Name | Accession | Description | Interval | E-value | |||||||||
FN2 | smart00059 | Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, ... |
353-401 | 5.10e-24 | |||||||||
Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, fibronectin. Also occurs in coagulation factor XII, 2 type IV collagenases, PDC-109, and cation-independent mannose-6-phosphate and secretory phospholipase A2 receptors. In fibronectin, PDC-109, and the collagenases, this domain contributes to collagen-binding function. Pssm-ID: 128373 Cd Length: 49 Bit Score: 96.60 E-value: 5.10e-24
|
|||||||||||||
FN2 | smart00059 | Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, ... |
413-461 | 2.52e-23 | |||||||||
Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, fibronectin. Also occurs in coagulation factor XII, 2 type IV collagenases, PDC-109, and cation-independent mannose-6-phosphate and secretory phospholipase A2 receptors. In fibronectin, PDC-109, and the collagenases, this domain contributes to collagen-binding function. Pssm-ID: 128373 Cd Length: 49 Bit Score: 94.67 E-value: 2.52e-23
|
|||||||||||||
FN2 | cd00062 | Fibronectin Type II domain: FN2 is one of three types of internal repeats which combine to ... |
354-401 | 2.10e-22 | |||||||||
Fibronectin Type II domain: FN2 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. Fibronectin is composed of 3 types of modules, FN1,FN2 and FN3. The collagen binding domain contains four FN1 and two FN2 repeats. Pssm-ID: 238019 Cd Length: 48 Bit Score: 91.98 E-value: 2.10e-22
|
|||||||||||||
FN2 | cd00062 | Fibronectin Type II domain: FN2 is one of three types of internal repeats which combine to ... |
414-461 | 2.39e-22 | |||||||||
Fibronectin Type II domain: FN2 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. Fibronectin is composed of 3 types of modules, FN1,FN2 and FN3. The collagen binding domain contains four FN1 and two FN2 repeats. Pssm-ID: 238019 Cd Length: 48 Bit Score: 91.60 E-value: 2.39e-22
|
|||||||||||||
fn3 | pfam00041 | Fibronectin type III domain; |
1449-1530 | 5.90e-21 | |||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 89.01 E-value: 5.90e-21
|
|||||||||||||
fn2 | pfam00040 | Fibronectin type II domain; |
360-401 | 2.11e-20 | |||||||||
Fibronectin type II domain; Pssm-ID: 459645 Cd Length: 42 Bit Score: 86.08 E-value: 2.11e-20
|
|||||||||||||
fn2 | pfam00040 | Fibronectin type II domain; |
420-461 | 1.61e-18 | |||||||||
Fibronectin type II domain; Pssm-ID: 459645 Cd Length: 42 Bit Score: 80.69 E-value: 1.61e-18
|
|||||||||||||
FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1904-1984 | 2.02e-17 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 79.46 E-value: 2.02e-17
|
|||||||||||||
fn3 | pfam00041 | Fibronectin type III domain; |
1268-1349 | 4.57e-17 | |||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 77.84 E-value: 4.57e-17
|
|||||||||||||
fn3 | pfam00041 | Fibronectin type III domain; |
1543-1623 | 1.99e-16 | |||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 76.30 E-value: 1.99e-16
|
|||||||||||||
FN3 | COG3401 | Fibronectin type 3 domain [General function prediction only]; |
1058-1538 | 2.64e-16 | |||||||||
Fibronectin type 3 domain [General function prediction only]; Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 85.05 E-value: 2.64e-16
|
|||||||||||||
fn3 | pfam00041 | Fibronectin type III domain; |
1904-1984 | 5.76e-16 | |||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 74.76 E-value: 5.76e-16
|
|||||||||||||
fn3 | pfam00041 | Fibronectin type III domain; |
1359-1438 | 5.93e-16 | |||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 74.76 E-value: 5.93e-16
|
|||||||||||||
FN3 | COG3401 | Fibronectin type 3 domain [General function prediction only]; |
1401-1857 | 8.46e-16 | |||||||||
Fibronectin type 3 domain [General function prediction only]; Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 83.51 E-value: 8.46e-16
|
|||||||||||||
FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1449-1531 | 1.68e-15 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 73.68 E-value: 1.68e-15
|
|||||||||||||
fn3 | pfam00041 | Fibronectin type III domain; |
1723-1803 | 2.00e-15 | |||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 73.22 E-value: 2.00e-15
|
|||||||||||||
FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
186-230 | 2.49e-15 | |||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 71.61 E-value: 2.49e-15
|
|||||||||||||
FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
561-604 | 2.85e-15 | |||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 71.61 E-value: 2.85e-15
|
|||||||||||||
FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
2175-2219 | 4.88e-15 | |||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 70.84 E-value: 4.88e-15
|
|||||||||||||
FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
2220-2261 | 5.54e-15 | |||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 70.84 E-value: 5.54e-15
|
|||||||||||||
FN3 | COG3401 | Fibronectin type 3 domain [General function prediction only]; |
1167-1668 | 7.40e-15 | |||||||||
Fibronectin type 3 domain [General function prediction only]; Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 80.43 E-value: 7.40e-15
|
|||||||||||||
fn3 | pfam00041 | Fibronectin type III domain; |
812-883 | 1.00e-14 | |||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 71.29 E-value: 1.00e-14
|
|||||||||||||
FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
470-508 | 1.33e-14 | |||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 69.69 E-value: 1.33e-14
|
|||||||||||||
fn1 | pfam00039 | Fibronectin type I domain; |
231-270 | 1.40e-14 | |||||||||
Fibronectin type I domain; Pssm-ID: 459644 Cd Length: 40 Bit Score: 69.26 E-value: 1.40e-14
|
|||||||||||||
FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
231-275 | 1.68e-14 | |||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 69.30 E-value: 1.68e-14
|
|||||||||||||
FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
811-899 | 2.39e-14 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 70.60 E-value: 2.39e-14
|
|||||||||||||
FN3 | COG3401 | Fibronectin type 3 domain [General function prediction only]; |
711-1034 | 3.33e-14 | |||||||||
Fibronectin type 3 domain [General function prediction only]; Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 78.51 E-value: 3.33e-14
|
|||||||||||||
FN3 | COG3401 | Fibronectin type 3 domain [General function prediction only]; |
1605-1975 | 3.95e-14 | |||||||||
Fibronectin type 3 domain [General function prediction only]; Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 78.12 E-value: 3.95e-14
|
|||||||||||||
fn3 | pfam00041 | Fibronectin type III domain; |
1815-1894 | 8.70e-14 | |||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 68.60 E-value: 8.70e-14
|
|||||||||||||
FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
518-560 | 1.02e-13 | |||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 66.99 E-value: 1.02e-13
|
|||||||||||||
FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1268-1347 | 1.18e-13 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 68.41 E-value: 1.18e-13
|
|||||||||||||
FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1543-1630 | 1.33e-13 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 68.29 E-value: 1.33e-13
|
|||||||||||||
fn3 | pfam00041 | Fibronectin type III domain; |
908-988 | 1.42e-13 | |||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 68.21 E-value: 1.42e-13
|
|||||||||||||
fn1 | pfam00039 | Fibronectin type I domain; |
470-508 | 1.46e-13 | |||||||||
Fibronectin type I domain; Pssm-ID: 459644 Cd Length: 40 Bit Score: 66.57 E-value: 1.46e-13
|
|||||||||||||
FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1268-1349 | 1.87e-13 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 67.91 E-value: 1.87e-13
|
|||||||||||||
fn1 | pfam00039 | Fibronectin type I domain; |
561-599 | 2.75e-13 | |||||||||
Fibronectin type I domain; Pssm-ID: 459644 Cd Length: 40 Bit Score: 65.80 E-value: 2.75e-13
|
|||||||||||||
FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1359-1438 | 3.81e-13 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 67.14 E-value: 3.81e-13
|
|||||||||||||
FN3 | COG3401 | Fibronectin type 3 domain [General function prediction only]; |
1501-2017 | 5.28e-13 | |||||||||
Fibronectin type 3 domain [General function prediction only]; Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 74.65 E-value: 5.28e-13
|
|||||||||||||
FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
559-602 | 5.69e-13 | |||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 65.05 E-value: 5.69e-13
|
|||||||||||||
fn3 | pfam00041 | Fibronectin type III domain; |
998-1076 | 8.60e-13 | |||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 65.90 E-value: 8.60e-13
|
|||||||||||||
FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1451-1527 | 9.31e-13 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 65.71 E-value: 9.31e-13
|
|||||||||||||
fn1 | pfam00039 | Fibronectin type I domain; |
186-225 | 9.41e-13 | |||||||||
Fibronectin type I domain; Pssm-ID: 459644 Cd Length: 40 Bit Score: 64.26 E-value: 9.41e-13
|
|||||||||||||
fn1 | pfam00039 | Fibronectin type I domain; |
2175-2214 | 1.39e-12 | |||||||||
Fibronectin type I domain; Pssm-ID: 459644 Cd Length: 40 Bit Score: 63.87 E-value: 1.39e-12
|
|||||||||||||
FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1904-1982 | 1.42e-12 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 65.33 E-value: 1.42e-12
|
|||||||||||||
FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
97-140 | 2.52e-12 | |||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 63.14 E-value: 2.52e-12
|
|||||||||||||
fn3 | pfam00041 | Fibronectin type III domain; |
727-798 | 3.09e-12 | |||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 64.36 E-value: 3.09e-12
|
|||||||||||||
fn1 | pfam00039 | Fibronectin type I domain; |
97-135 | 3.62e-12 | |||||||||
Fibronectin type I domain; Pssm-ID: 459644 Cd Length: 40 Bit Score: 62.72 E-value: 3.62e-12
|
|||||||||||||
FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
141-184 | 3.80e-12 | |||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 62.75 E-value: 3.80e-12
|
|||||||||||||
fn3 | pfam00041 | Fibronectin type III domain; |
1175-1258 | 6.67e-12 | |||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 63.20 E-value: 6.67e-12
|
|||||||||||||
FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
811-889 | 7.58e-12 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 63.02 E-value: 7.58e-12
|
|||||||||||||
FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
2263-2302 | 1.09e-11 | |||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 61.19 E-value: 1.09e-11
|
|||||||||||||
FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
95-136 | 1.18e-11 | |||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 61.19 E-value: 1.18e-11
|
|||||||||||||
FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
998-1084 | 1.26e-11 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 62.90 E-value: 1.26e-11
|
|||||||||||||
FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
2173-2217 | 1.56e-11 | |||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 60.81 E-value: 1.56e-11
|
|||||||||||||
FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
910-995 | 1.80e-11 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 62.51 E-value: 1.80e-11
|
|||||||||||||
fn1 | pfam00039 | Fibronectin type I domain; |
2220-2257 | 2.29e-11 | |||||||||
Fibronectin type I domain; Pssm-ID: 459644 Cd Length: 40 Bit Score: 60.41 E-value: 2.29e-11
|
|||||||||||||
fn3 | pfam00041 | Fibronectin type III domain; |
619-688 | 2.42e-11 | |||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 61.66 E-value: 2.42e-11
|
|||||||||||||
FN3 | COG3401 | Fibronectin type 3 domain [General function prediction only]; |
808-1390 | 2.74e-11 | |||||||||
Fibronectin type 3 domain [General function prediction only]; Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 68.88 E-value: 2.74e-11
|
|||||||||||||
FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1723-1810 | 4.97e-11 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 60.97 E-value: 4.97e-11
|
|||||||||||||
FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
184-227 | 6.01e-11 | |||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 59.27 E-value: 6.01e-11
|
|||||||||||||
FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
52-89 | 1.05e-10 | |||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 58.50 E-value: 1.05e-10
|
|||||||||||||
fn1 | pfam00039 | Fibronectin type I domain; |
141-179 | 1.65e-10 | |||||||||
Fibronectin type I domain; Pssm-ID: 459644 Cd Length: 40 Bit Score: 57.71 E-value: 1.65e-10
|
|||||||||||||
FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1543-1621 | 1.79e-10 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 59.17 E-value: 1.79e-10
|
|||||||||||||
FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1359-1437 | 1.86e-10 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 59.17 E-value: 1.86e-10
|
|||||||||||||
FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
2264-2304 | 3.06e-10 | |||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 57.36 E-value: 3.06e-10
|
|||||||||||||
FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
468-508 | 3.39e-10 | |||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 56.96 E-value: 3.39e-10
|
|||||||||||||
fn1 | pfam00039 | Fibronectin type I domain; |
524-555 | 4.52e-10 | |||||||||
Fibronectin type I domain; Pssm-ID: 459644 Cd Length: 40 Bit Score: 56.55 E-value: 4.52e-10
|
|||||||||||||
FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1633-1713 | 5.80e-10 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 58.28 E-value: 5.80e-10
|
|||||||||||||
COG4733 | COG4733 | Phage-related protein, tail protein J [Mobilome: prophages, transposons]; |
711-1018 | 6.35e-10 | |||||||||
Phage-related protein, tail protein J [Mobilome: prophages, transposons]; Pssm-ID: 443767 [Multi-domain] Cd Length: 978 Bit Score: 64.97 E-value: 6.35e-10
|
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FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1175-1264 | 8.16e-10 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 57.51 E-value: 8.16e-10
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FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
2219-2260 | 8.93e-10 | |||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 55.80 E-value: 8.93e-10
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fn3 | pfam00041 | Fibronectin type III domain; |
1633-1713 | 1.27e-09 | |||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 56.65 E-value: 1.27e-09
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FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
229-273 | 1.56e-09 | |||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 55.03 E-value: 1.56e-09
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FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
52-92 | 4.51e-09 | |||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 53.89 E-value: 4.51e-09
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FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1815-1895 | 4.86e-09 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 55.58 E-value: 4.86e-09
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FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
998-1075 | 5.20e-09 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 54.93 E-value: 5.20e-09
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FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1723-1794 | 9.25e-09 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 54.54 E-value: 9.25e-09
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FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
139-181 | 1.24e-08 | |||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 52.72 E-value: 1.24e-08
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FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
516-558 | 1.60e-08 | |||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 52.33 E-value: 1.60e-08
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FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
908-986 | 2.41e-08 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 53.00 E-value: 2.41e-08
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FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1175-1256 | 2.71e-08 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 53.00 E-value: 2.71e-08
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fn1 | pfam00039 | Fibronectin type I domain; |
2264-2299 | 6.33e-08 | |||||||||
Fibronectin type I domain; Pssm-ID: 459644 Cd Length: 40 Bit Score: 50.39 E-value: 6.33e-08
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fn1 | pfam00039 | Fibronectin type I domain; |
52-87 | 1.54e-07 | |||||||||
Fibronectin type I domain; Pssm-ID: 459644 Cd Length: 40 Bit Score: 49.62 E-value: 1.54e-07
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FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1815-1889 | 3.12e-07 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 49.92 E-value: 3.12e-07
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FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
727-809 | 3.38e-07 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 50.19 E-value: 3.38e-07
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fn3 | pfam00041 | Fibronectin type III domain; |
2075-2147 | 7.48e-07 | |||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 48.95 E-value: 7.48e-07
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fn3 | pfam00041 | Fibronectin type III domain; |
1092-1159 | 1.10e-06 | |||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 48.57 E-value: 1.10e-06
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COG4733 | COG4733 | Phage-related protein, tail protein J [Mobilome: prophages, transposons]; |
1785-1973 | 2.25e-06 | |||||||||
Phage-related protein, tail protein J [Mobilome: prophages, transposons]; Pssm-ID: 443767 [Multi-domain] Cd Length: 978 Bit Score: 53.41 E-value: 2.25e-06
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FN3 | COG3401 | Fibronectin type 3 domain [General function prediction only]; |
615-981 | 4.07e-06 | |||||||||
Fibronectin type 3 domain [General function prediction only]; Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 52.31 E-value: 4.07e-06
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FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
307-345 | 7.19e-06 | |||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 45.02 E-value: 7.19e-06
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FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
727-791 | 7.93e-06 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 46.07 E-value: 7.93e-06
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FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1635-1711 | 1.22e-05 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 45.68 E-value: 1.22e-05
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FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
616-688 | 1.23e-05 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 45.68 E-value: 1.23e-05
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FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
308-347 | 1.32e-05 | |||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 44.26 E-value: 1.32e-05
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COG4733 | COG4733 | Phage-related protein, tail protein J [Mobilome: prophages, transposons]; |
1140-1541 | 1.63e-05 | |||||||||
Phage-related protein, tail protein J [Mobilome: prophages, transposons]; Pssm-ID: 443767 [Multi-domain] Cd Length: 978 Bit Score: 50.33 E-value: 1.63e-05
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FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1096-1161 | 4.27e-05 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 44.14 E-value: 4.27e-05
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FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
628-678 | 1.29e-04 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 42.87 E-value: 1.29e-04
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FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1096-1161 | 5.01e-04 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 41.33 E-value: 5.01e-04
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COG4733 | COG4733 | Phage-related protein, tail protein J [Mobilome: prophages, transposons]; |
1082-1250 | 1.46e-03 | |||||||||
Phage-related protein, tail protein J [Mobilome: prophages, transposons]; Pssm-ID: 443767 [Multi-domain] Cd Length: 978 Bit Score: 44.17 E-value: 1.46e-03
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FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
2077-2143 | 5.94e-03 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 37.98 E-value: 5.94e-03
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COG4733 | COG4733 | Phage-related protein, tail protein J [Mobilome: prophages, transposons]; |
1462-1924 | 7.10e-03 | |||||||||
Phage-related protein, tail protein J [Mobilome: prophages, transposons]; Pssm-ID: 443767 [Multi-domain] Cd Length: 978 Bit Score: 41.85 E-value: 7.10e-03
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Blast search parameters | ||||
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