NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|94536844|ref|NP_033101|]
View 

ribose-5-phosphate isomerase [Mus musculus]

Protein Classification

ribose-5-phosphate isomerase A( domain architecture ID 10105348)

ribose-5-phosphate isomerase A catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
RPI_A cd01398
RPI_A: Ribose 5-phosphate isomerase type A (RPI_A) subfamily; RPI catalyzes the reversible ...
74-291 1.03e-111

RPI_A: Ribose 5-phosphate isomerase type A (RPI_A) subfamily; RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate, the first step of the non-oxidative branch of the pentose phosphate pathway. This reaction leads to the conversion of phosphosugars into glycolysis intermediates, which are precursors for the synthesis of amino acids, vitamins, nucleotides, and cell wall components. In plants, RPI is part of the Calvin cycle as ribulose 5-phosphate is the carbon dioxide receptor in the first dark reaction of photosynthesis. There are two unrelated types of RPIs (A and B), which catalyze the same reaction, at least one type of RPI is present in an organism. RPI_A is more widely distributed than RPI_B in bacteria, eukaryotes, and archaea.


:

Pssm-ID: 238692  Cd Length: 213  Bit Score: 321.73  E-value: 1.03e-111
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94536844  74 AKKLASHTAVEnHVKNNQVLGIGSGSTIVHAVQRIAERVKQENLDLICIPTSFQARQLILQYGLTLSDLDQHPEIDLAID 153
Cdd:cd01398   1 LKRAAARAAVD-YVEDGMVIGLGTGSTVAYFIEALGERVREEGLNIVGVPTSFQTEELARELGIPLTDLDEVPRLDLAID 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94536844 154 GADEVDAELNLIKGGGGCLTQEKIVAGYASRFIVIADFRKDSKNLGdrwHKGIPIEVIPMAYVPVSRAVaQKFGGEVELR 233
Cdd:cd01398  80 GADEVDPDLNLIKGGGGALLREKIVASAAKKFIVIADESKLVERLG---EFPLPVEVVPFAWSYVAREL-EKLGGKPVLR 155
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 94536844 234 MAVNKAGPVVTDNGNFILDWKFDRVHKWSEVNTAIKMTPGVVDTGLFINMAERVYFGM 291
Cdd:cd01398 156 EGSGKGGPVVTDNGNYILDVHFGTIEDPEALEKELKSIPGVVEHGLFLNMADEVIVGT 213
 
Name Accession Description Interval E-value
RPI_A cd01398
RPI_A: Ribose 5-phosphate isomerase type A (RPI_A) subfamily; RPI catalyzes the reversible ...
74-291 1.03e-111

RPI_A: Ribose 5-phosphate isomerase type A (RPI_A) subfamily; RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate, the first step of the non-oxidative branch of the pentose phosphate pathway. This reaction leads to the conversion of phosphosugars into glycolysis intermediates, which are precursors for the synthesis of amino acids, vitamins, nucleotides, and cell wall components. In plants, RPI is part of the Calvin cycle as ribulose 5-phosphate is the carbon dioxide receptor in the first dark reaction of photosynthesis. There are two unrelated types of RPIs (A and B), which catalyze the same reaction, at least one type of RPI is present in an organism. RPI_A is more widely distributed than RPI_B in bacteria, eukaryotes, and archaea.


Pssm-ID: 238692  Cd Length: 213  Bit Score: 321.73  E-value: 1.03e-111
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94536844  74 AKKLASHTAVEnHVKNNQVLGIGSGSTIVHAVQRIAERVKQENLDLICIPTSFQARQLILQYGLTLSDLDQHPEIDLAID 153
Cdd:cd01398   1 LKRAAARAAVD-YVEDGMVIGLGTGSTVAYFIEALGERVREEGLNIVGVPTSFQTEELARELGIPLTDLDEVPRLDLAID 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94536844 154 GADEVDAELNLIKGGGGCLTQEKIVAGYASRFIVIADFRKDSKNLGdrwHKGIPIEVIPMAYVPVSRAVaQKFGGEVELR 233
Cdd:cd01398  80 GADEVDPDLNLIKGGGGALLREKIVASAAKKFIVIADESKLVERLG---EFPLPVEVVPFAWSYVAREL-EKLGGKPVLR 155
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 94536844 234 MAVNKAGPVVTDNGNFILDWKFDRVHKWSEVNTAIKMTPGVVDTGLFINMAERVYFGM 291
Cdd:cd01398 156 EGSGKGGPVVTDNGNYILDVHFGTIEDPEALEKELKSIPGVVEHGLFLNMADEVIVGT 213
rpiA TIGR00021
ribose 5-phosphate isomerase; This model describes ribose 5-phosphate isomerase, an enzyme of ...
75-296 1.67e-111

ribose 5-phosphate isomerase; This model describes ribose 5-phosphate isomerase, an enzyme of the non-oxidative branch of the pentose phosphate pathway. [Energy metabolism, Pentose phosphate pathway]


Pssm-ID: 272859  Cd Length: 218  Bit Score: 321.48  E-value: 1.67e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94536844    75 KKLASHTAVENHVKNNQVLGIGSGSTIVHAVQRIAERVKQENLDLICIPTSFQARQLILQYGLTLSDLDQHPEIDLAIDG 154
Cdd:TIGR00021   1 LKRAAAEAAAEYVEDGMVVGLGTGSTVAYFIEALGERVKQEGLDIVGVPTSKQTAELARELGIPLSSLDEVPELDLAIDG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94536844   155 ADEVDAELNLIKGGGGCLTQEKIVAGYASRFIVIADFRKDSKNLGdrwHKGIPIEVIPMAYVPVSRAVaQKFGGEVELRM 234
Cdd:TIGR00021  81 ADEVDPNLQLIKGGGGALLREKIVASASKRFIVIADESKLVDKLG---KFPLPVEVVPFAWKAVARKL-EKLGGEPTLRQ 156
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 94536844   235 AvNKAGPVVTDNGNFILDWKFDRV-HKWSEVNTAIKMTPGVVDTGLFINMAERVYFGMQDGSV 296
Cdd:TIGR00021 157 G-NKGGPVVTDNGNYILDCHFGKIiPDPEALEEELKSIPGVVETGLFIDMADTVIVGTKDGVK 218
RpiA COG0120
Ribose 5-phosphate isomerase [Carbohydrate transport and metabolism];
69-301 9.67e-96

Ribose 5-phosphate isomerase [Carbohydrate transport and metabolism];


Pssm-ID: 223198  Cd Length: 227  Bit Score: 281.76  E-value: 9.67e-96
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94536844  69 SKAEEAKKLASHTAVEnHVKNNQVLGIGSGSTIVHAVQRIAERVKQEnLDLICIPTSFQARQLILQYGLTLSDLDQHPEI 148
Cdd:COG0120   1 MDQDELKKAAAKAALE-YVKDGMVIGLGTGSTAAYFIEALGRRVKGE-LDIGGVPTSFQTEELARELGIPVSSLNEVDSL 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94536844 149 DLAIDGADEVDAELNLIKGGGGCLTQEKIVAGYASRFIVIADFRKDSKNLGDrwhKGIPIEVIPMAYVPVSRAVAqKFGG 228
Cdd:COG0120  79 DLAIDGADEVDPNLNLIKGGGGALLREKIVASAAKRFIVIVDESKLVEVLGK---FPLPVEVIPFARSAVLRKLE-KLGG 154
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 94536844 229 EVELRMAVNKAGPVVTDNGNFILDWKFDRVHKWSEVNTAIKMTPGVVDTGLFINMAERVYFGMQDGSVNVREK 301
Cdd:COG0120 155 KPTLREGEGKDGPVITDNGNYILDVHFGRIEDPEELEKELNAIPGVVENGLFAGRAADVIIAGTDGGVKILEK 227
Rib_5-P_isom_A pfam06026
Ribose 5-phosphate isomerase A (phosphoriboisomerase A); This family consists of several ...
120-294 8.35e-92

Ribose 5-phosphate isomerase A (phosphoriboisomerase A); This family consists of several ribose 5-phosphate isomerase A or phosphoriboisomerase A (EC:5.3.1.6) from bacteria, eukaryotes and archaea.


Pssm-ID: 428727  Cd Length: 171  Bit Score: 269.62  E-value: 8.35e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94536844   120 ICIPTSFQARQLILQYGLTLSDLDQHPEIDLAIDGADEVDAELNLIKGGGGCLTQEKIVAGYASRFIVIADFRKDSKNLG 199
Cdd:pfam06026   1 VGVPTSFQTAELARELGIPLTDLDEVPEIDVAIDGADEVDPNLNLIKGGGGALLREKIVASAAKKFIVIADESKLVDRLG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94536844   200 DrwhKGIPIEVIPMAYVPVSRAVaQKFGGEVELRMAvNKAGPVVTDNGNFILDWKF-DRVHKWSEVNTAIKMTPGVVDTG 278
Cdd:pfam06026  81 K---FPLPVEVIPFAWSYVAREL-EKLGGKPVLRMA-GKDGPVVTDNGNFILDVHFlGIIEDPAELEKELKAIPGVVEHG 155
                         170
                  ....*....|....*.
gi 94536844   279 LFINMAERVYFGMQDG 294
Cdd:pfam06026 156 LFLGMADTVIVGGEDG 171
PRK00702 PRK00702
ribose-5-phosphate isomerase RpiA;
72-294 1.67e-88

ribose-5-phosphate isomerase RpiA;


Pssm-ID: 234816  Cd Length: 220  Bit Score: 263.08  E-value: 1.67e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94536844   72 EEAKKLASHTAVEnHVKNNQVLGIGSGSTIVHAVQRIAERVKQEnLDLICIPTSFQARQLILQYGLTLSDLDQHPEIDLA 151
Cdd:PRK00702   4 DELKKAAAEAAAE-YVEDGMIVGLGTGSTAAYFIDALGERVKEG-LIIGGVPTSEASTELAKELGIPLFDLNEVDSLDLY 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94536844  152 IDGADEVDAELNLIKGGGGCLTQEKIVAGYASRFIVIADFRKDSKNLGDRwhkGIPIEVIPMAYVPVSRAVAqKFGGEVE 231
Cdd:PRK00702  82 VDGADEIDPHLNLIKGGGAALTREKIVAAAAKRFICIVDESKLVDVLGKF---PLPVEVIPFARSAVARELE-KLGGQPE 157
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 94536844  232 LRMavnkAGPVVTDNGNFILDWKFDRVHKWSEVNTAIKMTPGVVDTGLFINMAERVYFGMQDG 294
Cdd:PRK00702 158 LRM----DEPVVTDNGNYILDVHFGRIPDPEALEKELNNIPGVVEHGLFANRADVVLVGTPDG 216
 
Name Accession Description Interval E-value
RPI_A cd01398
RPI_A: Ribose 5-phosphate isomerase type A (RPI_A) subfamily; RPI catalyzes the reversible ...
74-291 1.03e-111

RPI_A: Ribose 5-phosphate isomerase type A (RPI_A) subfamily; RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate, the first step of the non-oxidative branch of the pentose phosphate pathway. This reaction leads to the conversion of phosphosugars into glycolysis intermediates, which are precursors for the synthesis of amino acids, vitamins, nucleotides, and cell wall components. In plants, RPI is part of the Calvin cycle as ribulose 5-phosphate is the carbon dioxide receptor in the first dark reaction of photosynthesis. There are two unrelated types of RPIs (A and B), which catalyze the same reaction, at least one type of RPI is present in an organism. RPI_A is more widely distributed than RPI_B in bacteria, eukaryotes, and archaea.


Pssm-ID: 238692  Cd Length: 213  Bit Score: 321.73  E-value: 1.03e-111
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94536844  74 AKKLASHTAVEnHVKNNQVLGIGSGSTIVHAVQRIAERVKQENLDLICIPTSFQARQLILQYGLTLSDLDQHPEIDLAID 153
Cdd:cd01398   1 LKRAAARAAVD-YVEDGMVIGLGTGSTVAYFIEALGERVREEGLNIVGVPTSFQTEELARELGIPLTDLDEVPRLDLAID 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94536844 154 GADEVDAELNLIKGGGGCLTQEKIVAGYASRFIVIADFRKDSKNLGdrwHKGIPIEVIPMAYVPVSRAVaQKFGGEVELR 233
Cdd:cd01398  80 GADEVDPDLNLIKGGGGALLREKIVASAAKKFIVIADESKLVERLG---EFPLPVEVVPFAWSYVAREL-EKLGGKPVLR 155
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 94536844 234 MAVNKAGPVVTDNGNFILDWKFDRVHKWSEVNTAIKMTPGVVDTGLFINMAERVYFGM 291
Cdd:cd01398 156 EGSGKGGPVVTDNGNYILDVHFGTIEDPEALEKELKSIPGVVEHGLFLNMADEVIVGT 213
rpiA TIGR00021
ribose 5-phosphate isomerase; This model describes ribose 5-phosphate isomerase, an enzyme of ...
75-296 1.67e-111

ribose 5-phosphate isomerase; This model describes ribose 5-phosphate isomerase, an enzyme of the non-oxidative branch of the pentose phosphate pathway. [Energy metabolism, Pentose phosphate pathway]


Pssm-ID: 272859  Cd Length: 218  Bit Score: 321.48  E-value: 1.67e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94536844    75 KKLASHTAVENHVKNNQVLGIGSGSTIVHAVQRIAERVKQENLDLICIPTSFQARQLILQYGLTLSDLDQHPEIDLAIDG 154
Cdd:TIGR00021   1 LKRAAAEAAAEYVEDGMVVGLGTGSTVAYFIEALGERVKQEGLDIVGVPTSKQTAELARELGIPLSSLDEVPELDLAIDG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94536844   155 ADEVDAELNLIKGGGGCLTQEKIVAGYASRFIVIADFRKDSKNLGdrwHKGIPIEVIPMAYVPVSRAVaQKFGGEVELRM 234
Cdd:TIGR00021  81 ADEVDPNLQLIKGGGGALLREKIVASASKRFIVIADESKLVDKLG---KFPLPVEVVPFAWKAVARKL-EKLGGEPTLRQ 156
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 94536844   235 AvNKAGPVVTDNGNFILDWKFDRV-HKWSEVNTAIKMTPGVVDTGLFINMAERVYFGMQDGSV 296
Cdd:TIGR00021 157 G-NKGGPVVTDNGNYILDCHFGKIiPDPEALEEELKSIPGVVETGLFIDMADTVIVGTKDGVK 218
RpiA COG0120
Ribose 5-phosphate isomerase [Carbohydrate transport and metabolism];
69-301 9.67e-96

Ribose 5-phosphate isomerase [Carbohydrate transport and metabolism];


Pssm-ID: 223198  Cd Length: 227  Bit Score: 281.76  E-value: 9.67e-96
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94536844  69 SKAEEAKKLASHTAVEnHVKNNQVLGIGSGSTIVHAVQRIAERVKQEnLDLICIPTSFQARQLILQYGLTLSDLDQHPEI 148
Cdd:COG0120   1 MDQDELKKAAAKAALE-YVKDGMVIGLGTGSTAAYFIEALGRRVKGE-LDIGGVPTSFQTEELARELGIPVSSLNEVDSL 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94536844 149 DLAIDGADEVDAELNLIKGGGGCLTQEKIVAGYASRFIVIADFRKDSKNLGDrwhKGIPIEVIPMAYVPVSRAVAqKFGG 228
Cdd:COG0120  79 DLAIDGADEVDPNLNLIKGGGGALLREKIVASAAKRFIVIVDESKLVEVLGK---FPLPVEVIPFARSAVLRKLE-KLGG 154
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 94536844 229 EVELRMAVNKAGPVVTDNGNFILDWKFDRVHKWSEVNTAIKMTPGVVDTGLFINMAERVYFGMQDGSVNVREK 301
Cdd:COG0120 155 KPTLREGEGKDGPVITDNGNYILDVHFGRIEDPEELEKELNAIPGVVENGLFAGRAADVIIAGTDGGVKILEK 227
Rib_5-P_isom_A pfam06026
Ribose 5-phosphate isomerase A (phosphoriboisomerase A); This family consists of several ...
120-294 8.35e-92

Ribose 5-phosphate isomerase A (phosphoriboisomerase A); This family consists of several ribose 5-phosphate isomerase A or phosphoriboisomerase A (EC:5.3.1.6) from bacteria, eukaryotes and archaea.


Pssm-ID: 428727  Cd Length: 171  Bit Score: 269.62  E-value: 8.35e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94536844   120 ICIPTSFQARQLILQYGLTLSDLDQHPEIDLAIDGADEVDAELNLIKGGGGCLTQEKIVAGYASRFIVIADFRKDSKNLG 199
Cdd:pfam06026   1 VGVPTSFQTAELARELGIPLTDLDEVPEIDVAIDGADEVDPNLNLIKGGGGALLREKIVASAAKKFIVIADESKLVDRLG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94536844   200 DrwhKGIPIEVIPMAYVPVSRAVaQKFGGEVELRMAvNKAGPVVTDNGNFILDWKF-DRVHKWSEVNTAIKMTPGVVDTG 278
Cdd:pfam06026  81 K---FPLPVEVIPFAWSYVAREL-EKLGGKPVLRMA-GKDGPVVTDNGNFILDVHFlGIIEDPAELEKELKAIPGVVEHG 155
                         170
                  ....*....|....*.
gi 94536844   279 LFINMAERVYFGMQDG 294
Cdd:pfam06026 156 LFLGMADTVIVGGEDG 171
PRK00702 PRK00702
ribose-5-phosphate isomerase RpiA;
72-294 1.67e-88

ribose-5-phosphate isomerase RpiA;


Pssm-ID: 234816  Cd Length: 220  Bit Score: 263.08  E-value: 1.67e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94536844   72 EEAKKLASHTAVEnHVKNNQVLGIGSGSTIVHAVQRIAERVKQEnLDLICIPTSFQARQLILQYGLTLSDLDQHPEIDLA 151
Cdd:PRK00702   4 DELKKAAAEAAAE-YVEDGMIVGLGTGSTAAYFIDALGERVKEG-LIIGGVPTSEASTELAKELGIPLFDLNEVDSLDLY 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94536844  152 IDGADEVDAELNLIKGGGGCLTQEKIVAGYASRFIVIADFRKDSKNLGDRwhkGIPIEVIPMAYVPVSRAVAqKFGGEVE 231
Cdd:PRK00702  82 VDGADEIDPHLNLIKGGGAALTREKIVAAAAKRFICIVDESKLVDVLGKF---PLPVEVIPFARSAVARELE-KLGGQPE 157
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 94536844  232 LRMavnkAGPVVTDNGNFILDWKFDRVHKWSEVNTAIKMTPGVVDTGLFINMAERVYFGMQDG 294
Cdd:PRK00702 158 LRM----DEPVVTDNGNYILDVHFGRIPDPEALEKELNNIPGVVEHGLFANRADVVLVGTPDG 216
PLN02384 PLN02384
ribose-5-phosphate isomerase
58-287 6.27e-55

ribose-5-phosphate isomerase


Pssm-ID: 215215  Cd Length: 264  Bit Score: 179.25  E-value: 6.27e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94536844   58 SSAGGPAPSTMSKAEEAKKLASHTAVEnHVKNNQVLGIGSGSTIVHAVQRIAERVKQENL-DLICIPTSFQARQLILQYG 136
Cdd:PLN02384  19 GSMLSPSSPVILTQDELKKIAAYKAVE-FVESGMVLGLGTGSTAKHAVDRIGELLRQGKLkNIIGIPTSKKTHEQAVSLG 97
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94536844  137 LTLSDLDQHPEIDLAIDGADEVDAELNLIKGGGGCLTQEKIVAGYASRFIVIADFRKDSKNLGDRwHKGIPIEVIPMAYV 216
Cdd:PLN02384  98 IPLSDLDSHPVVDLAIDGADEVDPNLNLVKGRGGSLLREKMIEGACKKFVVIVDESKLVKHIGGS-GLAMPVEVVPFCWK 176
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 94536844  217 PVSRAVAQKF---GGEVELRMAVNKAGPVVTDNGNFILDWKFDR-VHKWSEVNTAIKMTPGVVDTGLFINMAERV 287
Cdd:PLN02384 177 FTAEKLQSLFeyaGCVAKLRTKNNGEEPFVTDNGNYIVDLYFKRdIGDLKVASDAILRLAGVVEHGMFLDMATTV 251
PRK13978 PRK13978
ribose 5-phosphate isomerase A;
68-301 7.28e-45

ribose 5-phosphate isomerase A;


Pssm-ID: 184433  Cd Length: 228  Bit Score: 151.84  E-value: 7.28e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94536844   68 MSKAEEAKKLASHTAVeNHVKNNQVLGIGSGSTIVHAVQRIAERVKQENLDLICIPTSFQARQLILQYGLTLSDLDQHPE 147
Cdd:PRK13978   1 MKDVKALKLMTLNDVL-SQINGDMTLGIGTGSTMELLLPQMAQLIKERGYNITGVCTSNKIAFLAKELGIKICEINDVDH 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94536844  148 IDLAIDGADEVDAELNLIKGGGGCLTQEKIVAGYASRFIVIADFRKDSKNLGDRWHkgIPIEVIPMAYVPVSRAVAQKFG 227
Cdd:PRK13978  80 IDLAIDGADEVDPSLNIIKGGGGALFREKVIDEMASRFVVVVDETKIVQYLGETFK--LPVEVDKFNWYHILRKIESYAD 157
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 94536844  228 GEVELRMavNKAGPVVTDNGNFILDWKF-DRVHKWSEVNTAIKMTpGVVDTGLFINMAERVYFGMQDGsVNVREK 301
Cdd:PRK13978 158 IKVERRV--NEDVAFITDNGNYILDCKLpKGIDPYKFHEYLIHLT-GVFETGYFLDMADQVIVGTQEG-VKILEK 228
PRK04182 PRK04182
cytidylate kinase; Provisional
96-153 8.41e-03

cytidylate kinase; Provisional


Pssm-ID: 235244 [Multi-domain]  Cd Length: 180  Bit Score: 36.32  E-value: 8.41e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 94536844   96 GSGSTIVhaVQRIAERVkqeNLDLICIPTSFqaRQLILQYGLTLSDL----DQHPEIDLAID 153
Cdd:PRK04182  10 GSGKTTV--ARLLAEKL---GLKHVSAGEIF--RELAKERGMSLEEFnkyaEEDPEIDKEID 64
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.20
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH