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Conserved domains on  [gi|159110803|ref|NP_033177|]
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P-selectin glycoprotein ligand 1 precursor [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
rne super family cl35953
ribonuclease E; Reviewed
 133-276 7.99e-09

ribonuclease E; Reviewed


The actual alignment was detected with superfamily member PRK10811:

Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 57.74  E-value: 7.99e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803  133 ETVQPASTEVETSQPAPMEAETSQPAPMEAETSQPAP-MEAETSQPAPMEADTSQPAPMEAD-TSKPAPTEAETSKPAPT 210
Cdd:PRK10811  862 EEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEPvVVAEPQPEEVVVVETTHPEVIAAPvTEQPQVITESDVAVAQE 941

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 159110803  211 EAETSQPAPNEAETSKPAPTEAETSKPAPTEAETTQLPRIQAVKTLFTTSAATEVPSTEPTTMETA 276
Cdd:PRK10811  942 VAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQVP 1007
 
Name Accession Description Interval E-value
rne PRK10811
ribonuclease E; Reviewed
 133-276 7.99e-09

ribonuclease E; Reviewed


Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 57.74  E-value: 7.99e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803  133 ETVQPASTEVETSQPAPMEAETSQPAPMEAETSQPAP-MEAETSQPAPMEADTSQPAPMEAD-TSKPAPTEAETSKPAPT 210
Cdd:PRK10811  862 EEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEPvVVAEPQPEEVVVVETTHPEVIAAPvTEQPQVITESDVAVAQE 941

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 159110803  211 EAETSQPAPNEAETSKPAPTEAETSKPAPTEAETTQLPRIQAVKTLFTTSAATEVPSTEPTTMETA 276
Cdd:PRK10811  942 VAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQVP 1007
Agg_substance NF033875
LPXTG-anchored aggregation substance; Aggregation substances, as described in Enterococcus, ...
 115-254 5.23e-06

LPXTG-anchored aggregation substance; Aggregation substances, as described in Enterococcus, are LPXTG-anchored large surface proteins that contribute to virulence. Several closely related paralogs may be found in a single strain.


Pssm-ID: 411439 [Multi-domain]  Cd Length: 1306  Bit Score: 48.94  E-value: 5.23e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803  115 AVGmLSTDSATQWSLTS---VETVQPASTEVETSQPAPMEAETSQPAPMEAETSQPAPME--------AETSQPAPMEAD 183
Cdd:NF033875   33 VVG-LATDNVQAAELDTqpgTTTVQPDNPDPQSGSETPKTAVSEEATVQKDTTSQPTKVEevasekngAEQSSATPNDTT 111

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 159110803  184 TSQPAPMEADTS---KPAPTEAETSKP--APTEAetsQPAPNEAETSKPAPTEAETSKPAPTEAETTQLPRIQAVK 254
Cdd:NF033875  112 NAQQPTVGAEKSaqeQPVVSPETTNEPlgQPTEV---APAENEANKSTSIPKEFETPDVDKAVDEAKKDPNITVVE 184
NDFIP2 cd22306
NEDD4 family-interacting protein 2; The NEDD4 (neural precursor cell expressed, ...
 151-243 1.29e-04

NEDD4 family-interacting protein 2; The NEDD4 (neural precursor cell expressed, developmentally down-regulated protein 4)-family interacting proteins (NDFIPs) are adaptor proteins that recruit NEDD4 E3 ligases to specific substrate proteins, which leads to the ubiquitylation and subsequent degradation of these proteins. They also act as activators of the E3 ligase activity by releasing NEDD4 ligase from its auto-inhibitory conformation. NDFIP2 may play a role in protein trafficking.


Pssm-ID: 412070 [Multi-domain]  Cd Length: 229  Bit Score: 42.95  E-value: 1.29e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 151 EAETSQPAPMEAETSQPAPMEAetSQPAPMEADTSQPAPMEADTSKPAPTEAETSK-----PAPTEAETSQPAPNEAETS 225
Cdd:cd22306   10 EDDPSESSASEQPSTSTQVQES--SSNPAPETDAPPPPYSSITAGATAAPGTETQSefypvPPPYSVATSLPTYDEAEKA 87

                         90
                 ....*....|....*...
gi 159110803 226 KPAPTEAETSKPAPTEAE 243
Cdd:cd22306   88 KAAAMAAAAAEVAQREEE 105
Herpes_BLLF1 pfam05109
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...
 54-283 1.75e-03

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.


Pssm-ID: 282904 [Multi-domain]  Cd Length: 886  Bit Score: 40.67  E-value: 1.75e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803   54 YTYNTDPPELLKNVTNTVAAHPELPTTVVMLERDSTSAGTSERATEKIATTDPTAPGTGGTAVGMLSTDSATQWSLTSVE 133
Cdd:pfam05109 366 WTLTSGTPSGCENISGAFASNRTFDITVSGLGTAPKTLIITRTATNATTTTHKVIFSKAPESTTTSPTLNTTGFAAPNTT 445

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803  134 TVQPASTEVETSQPAPmeaETSQPAPMEAETSQPAPmEAETSQPAPMeadTSQPAPMEADTSKPAPTEAETSKPAPTEAE 213
Cdd:pfam05109 446 TGLPSSTHVPTNLTAP---ASTGPTVSTADVTSPTP-AGTTSGASPV---TPSPSPRDNGTESKAPDMTSPTSAVTTPTP 518

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 159110803  214 TSQPAPNEAETSKPAPTEAETSKPAPTEAETTQLPR----IQAVKTLFTTSAATEVPSTEPTTMETASTESNES 283
Cdd:pfam05109 519 NATSPTPAVTTPTPNATSPTLGKTSPTSAVTTPTPNatspTPAVTTPTPNATIPTLGKTSPTSAVTTPTPNATS 592
DamX COG3266
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...
 58-262 3.06e-03

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442497 [Multi-domain]  Cd Length: 455  Bit Score: 39.83  E-value: 3.06e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803  58 TDPPELLKNVTNTVAAHPELPTTVVMLERDSTSAGTSERATEKIATTDPTAPGTGGTAVGMLSTDSATQWSLTSVETVQP 137
Cdd:COG3266  162 LLLLALQDIQGTLQALGAVAALLGLRKAEEALALRAGSAAADALALLLLLLASALGEAVAAAAELAALALLAAGAAEVLT 241

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 138 ASTEVETSQPAPMEAETSQPAPMEAETSQPAPMEAETS-QPAPMEADTSQPAPMEADTSKPAPTEAETSKPAPTEAETSQ 216
Cdd:COG3266  242 ARLVLLLLIIGSALKAPSQASSASAPATTSLGEQQEVSlPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQ 321

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 159110803 217 PapneaETSKPAPTE-AETSKPAPTEAETTQLPRIQAVKTLFTTSAA 262
Cdd:COG3266  322 P-----TAAKPVVTEtAAPAAPAPEAAAAAAAPAAPAVAKKLAADEQ 363
SepH NF040712
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...
 131-252 6.79e-03

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.


Pssm-ID: 468676 [Multi-domain]  Cd Length: 346  Bit Score: 38.21  E-value: 6.79e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 131 SVETVQPASTEVETSQPAPM-EAETSQPAPMEAETSQPAPMEAETSQPAPMEADTSQPAPMEADTSKPAPTEAETSKPAP 209
Cdd:NF040712 198 PLATVPRLAREPADARPEEVePAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGPGAAPAAEPDEATRDA 277

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 159110803 210 TEAETSQPAPNEAETSKPAPTEAETSKPAPTEAETTQLPRIQA 252
Cdd:NF040712 278 GEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPP 320
 
Name Accession Description Interval E-value
rne PRK10811
ribonuclease E; Reviewed
 133-276 7.99e-09

ribonuclease E; Reviewed


Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 57.74  E-value: 7.99e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803  133 ETVQPASTEVETSQPAPMEAETSQPAPMEAETSQPAP-MEAETSQPAPMEADTSQPAPMEAD-TSKPAPTEAETSKPAPT 210
Cdd:PRK10811  862 EEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEPvVVAEPQPEEVVVVETTHPEVIAAPvTEQPQVITESDVAVAQE 941

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 159110803  211 EAETSQPAPNEAETSKPAPTEAETSKPAPTEAETTQLPRIQAVKTLFTTSAATEVPSTEPTTMETA 276
Cdd:PRK10811  942 VAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQVP 1007
rne PRK10811
ribonuclease E; Reviewed
 130-252 7.06e-08

ribonuclease E; Reviewed


Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 54.66  E-value: 7.06e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803  130 TSVETVQPASTEVETSQPAPMEAETSQPAPMEAETSQPAPMEAE-TSQPAPMEADTSQPAPMEADTSKPAPTEAETSKPA 208
Cdd:PRK10811  880 EPVVSAPVVEAVAEVVEEPVVVAEPQPEEVVVVETTHPEVIAAPvTEQPQVITESDVAVAQEVAEHAEPVVEPQDETADI 959

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 159110803  209 PTEAETSQPAPNEAETSKPAPTEAETSKPAPTEAETTQLPRIQA 252
Cdd:PRK10811  960 EEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAP 1003
rne PRK10811
ribonuclease E; Reviewed
 132-271 7.57e-08

ribonuclease E; Reviewed


Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 54.66  E-value: 7.57e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803  132 VETVQPASTEVETSQPAPMEAETSQPAP-MEAETSQPAPMEAETSQPAPMEAD-TSQPAPMEADTSKPAPTEAETSKPAP 209
Cdd:PRK10811  871 AEVPVAAAVEPVVSAPVVEAVAEVVEEPvVVAEPQPEEVVVVETTHPEVIAAPvTEQPQVITESDVAVAQEVAEHAEPVV 950

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 159110803  210 TEAETSQPAPNEAETSKPAPTEAETSkpAPTEAETTQLPRIQAVKTLFTTSAATEVPSTEPT 271
Cdd:PRK10811  951 EPQDETADIEEAAETAEVVVAEPEVV--AQPAAPVVAEVAAEVETVTAVEPEVAPAQVPEAT 1010
rne PRK10811
ribonuclease E; Reviewed
 130-269 1.49e-07

ribonuclease E; Reviewed


Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 53.89  E-value: 1.49e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803  130 TSVETVQPASTEVETSQPAPMEAETSQPAPMEAE-TSQPAPMEAETSQPAPMEADTSQPAPMEADTSKPAPTEAETSKPA 208
Cdd:PRK10811  890 AVAEVVEEPVVVAEPQPEEVVVVETTHPEVIAAPvTEQPQVITESDVAVAQEVAEHAEPVVEPQDETADIEEAAETAEVV 969

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 159110803  209 PTEAETSQPAPNEAETSKPAPTEAETSKPAPTEAETtqlPRIQAVKTLFTTSAATEVPSTE 269
Cdd:PRK10811  970 VAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQ---VPEATVEHNHATAPMTRAPAPE 1027
rne PRK10811
ribonuclease E; Reviewed
 141-280 1.60e-07

ribonuclease E; Reviewed


Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 53.50  E-value: 1.60e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803  141 EVETSQPAPMEAETSQPAPMEAETSQPAPMEAETSQPAP-MEADTSQPAPMEADTSKPAPTEAE-TSKPAPTEAETSQPA 218
Cdd:PRK10811  860 EAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEPvVVAEPQPEEVVVVETTHPEVIAAPvTEQPQVITESDVAVA 939

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 159110803  219 PNEAETSKPAPTEAETSKPAPTEAETTQLPRIQAvkTLFTTSAATEVPSTEPTTMETASTES 280
Cdd:PRK10811  940 QEVAEHAEPVVEPQDETADIEEAAETAEVVVAEP--EVVAQPAAPVVAEVAAEVETVTAVEP 999
PRK13108 PRK13108
prolipoprotein diacylglyceryl transferase; Reviewed
 72-233 1.95e-07

prolipoprotein diacylglyceryl transferase; Reviewed


Pssm-ID: 237284 [Multi-domain]  Cd Length: 460  Bit Score: 53.06  E-value: 1.95e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803  72 AAHPElPTTVVMLERDSTSAGTSERATEKIATTDPTAPGTGGTAVGMLSTDSATQWSLTSVETVQPASTEVETSQPApme 151
Cdd:PRK13108 295 ALERE-PAELAAAAVASAASAVGPVGPGEPNQPDDVAEAVKAEVAEVTDEVAAESVVQVADRDGESTPAVEETSEAD--- 370

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 152 AETSQPAPMEAEtsqpAPMEAETSQPAPMEADTSQPAPMEADTSKPAPTEAETSKPAPTEAETSQPApneAETSKPAPTE 231
Cdd:PRK13108 371 IEREQPGDLAGQ----APAAHQVDAEAASAAPEEPAALASEAHDETEPEVPEKAAPIPDPAKPDELA---VAGPGDDPAE 443


                 ..
gi 159110803 232 AE 233
Cdd:PRK13108 444 PD 445
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 100-255 3.60e-07

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 52.18  E-value: 3.60e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 100 KIATTDPTAPGTGGTAVGmlstdsATQWSLTSVETVQPASTEVETSQPAPMEAetSQPAPMEAETSQPAPMEAETSQPAP 179
Cdd:PRK07994 362 AAPLPEPEVPPQSAAPAA------SAQATAAPTAAVAPPQAPAVPPPPASAPQ--QAPAVPLPETTSQLLAARQQLQRAQ 433

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 159110803 180 MEADTSQPAPMEADTSKPAPTEAETSKPAPTEAETSQPAPNEAETSKPAPTEAETSKPAPTEAETTQLPRIQAVKT 255
Cdd:PRK07994 434 GATKAKKSEPAAASRARPVNSALERLASVRPAPSALEKAPAKKEAYRWKATNPVEVKKEPVATPKALKKALEHEKT 509
PHA03269 PHA03269
envelope glycoprotein C; Provisional
 138-279 4.67e-07

envelope glycoprotein C; Provisional


Pssm-ID: 165527 [Multi-domain]  Cd Length: 566  Bit Score: 52.04  E-value: 4.67e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 138 ASTEVETSQPAPMEAETSQPAPMEAETSqpapmeAETSQPAPMEADTsqPAPMEADTSKPAPTEAETSKPAPTEAETSQ- 216
Cdd:PHA03269  35 AATQKPDPAPAPHQAASRAPDPAVAPTS------AASRKPDLAQAPT--PAASEKFDPAPAPHQAASRAPDPAVAPQLAa 106

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 159110803 217 -PAPNEAEtskpAPTEAETSKPAPTEAETTQLPRiqavktlfTTSAATEVPSTEPTTMETASTE 279
Cdd:PHA03269 107 aPKPDAAE----AFTSAAQAHEAPADAGTSAASK--------KPDPAAHTQHSPPPFAYTRSME 158
PRK08691 PRK08691
DNA polymerase III subunits gamma and tau; Validated
 134-266 1.02e-06

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236333 [Multi-domain]  Cd Length: 709  Bit Score: 50.86  E-value: 1.02e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 134 TVQPASTEVETSQPAPMEAETSQPAPMEAETSQPAPMEAETSQPAPMEADTSQP----APMEADTskPAPTEAETSKPAP 209
Cdd:PRK08691 381 SAQTAEKETAAKKPQPRPEAETAQTPVQTASAAAMPSEGKTAGPVSNQENNDVPpwedAPDEAQT--AAGTAQTSAKSIQ 458

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 159110803 210 TEAETSQPAPNEAETSKPAPTEAETS-KPAPTEAETTQLPRIQAVKTLFTTSAATEVP 266
Cdd:PRK08691 459 TASEAETPPENQVSKNKAADNETDAPlSEVPSENPIQATPNDEAVETETFAHEAPAEP 516
PRK13108 PRK13108
prolipoprotein diacylglyceryl transferase; Reviewed
 88-243 1.26e-06

prolipoprotein diacylglyceryl transferase; Reviewed


Pssm-ID: 237284 [Multi-domain]  Cd Length: 460  Bit Score: 50.36  E-value: 1.26e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803  88 STSAGTSERATEKIattdpTAPGTGGTAVGmlsTDSATQwslTSVETVQPASTEVETSQPAPMEAETSQPAPMEAETSQP 167
Cdd:PRK13108 301 AELAAAAVASAASA-----VGPVGPGEPNQ---PDDVAE---AVKAEVAEVTDEVAAESVVQVADRDGESTPAVEETSEA 369

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 159110803 168 A---PMEAETSQPAPMEADTSQPAPMEADTSKPAPTEAETSKPAPTEAETSQPAPNEAETSKPApteAETSKPAPTEAE 243
Cdd:PRK13108 370 DierEQPGDLAGQAPAAHQVDAEAASAAPEEPAALASEAHDETEPEVPEKAAPIPDPAKPDELA---VAGPGDDPAEPD 445
rne PRK10811
ribonuclease E; Reviewed
 138-283 1.40e-06

ribonuclease E; Reviewed


Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 50.81  E-value: 1.40e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803  138 ASTEVETSQPAPMEAETSQPAPMEAETSQPAPMEAETSQPAPMEADTSQPAPMEADTSKPAP-TEAETSKPAPTEAETSQ 216
Cdd:PRK10811  837 ASGKVWIRYPVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEPvVVAEPQPEEVVVVETTH 916

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803  217 PAPNEAETSKPAP--TEAETSKPAPTEAETTQLPRIQAVKTLFTTSAAT-EVPSTEPTTMETASTESNES 283
Cdd:PRK10811  917 PEVIAAPVTEQPQviTESDVAVAQEVAEHAEPVVEPQDETADIEEAAETaEVVVAEPEVVAQPAAPVVAE 986
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 155-277 1.51e-06

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 50.48  E-value: 1.51e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 155 SQPAPMEAETSQPAPMEAETSQPAPMEADTSQPAPMEAD-TSKPAPTEAETSKPAPTEAETSQPAPNEAETSKPAPTEAE 233
Cdd:PRK14951 369 AAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPaAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALA 448

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 159110803 234 TSKPAPTEAETTQLPRIQAVKTLFTTSAATEVPSTEPTTMETAS 277
Cdd:PRK14951 449 PAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
PRK08691 PRK08691
DNA polymerase III subunits gamma and tau; Validated
 114-280 4.63e-06

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236333 [Multi-domain]  Cd Length: 709  Bit Score: 48.94  E-value: 4.63e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 114 TAVGMLSTDSATQWSLTSVETVQPASTEVETSQPAPMEAETSQPAPMEAETSQPAPMEAETSQPAPMEADTSQPAPMEAD 193
Cdd:PRK08691 351 TLLRMLAFAPLAAASCDANAVIENTELQSPSAQTAEKETAAKKPQPRPEAETAQTPVQTASAAAMPSEGKTAGPVSNQEN 430

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 194 TSKP----APTEAETSK-PAPTEAETSQPApneAETSKPAPTEAETSKPA--PTEAETTQLPriqavktlfTTSAATEVP 266
Cdd:PRK08691 431 NDVPpwedAPDEAQTAAgTAQTSAKSIQTA---SEAETPPENQVSKNKAAdnETDAPLSEVP---------SENPIQATP 498

                        170
                 ....*....|....
gi 159110803 267 STEPTTMETASTES 280
Cdd:PRK08691 499 NDEAVETETFAHEA 512
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
72-222 4.83e-06

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 48.69  E-value: 4.83e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803  72 AAHPELPTTVVMLERDSTSAGTSERATEKIATTDPTAPGTGGTAVGMLSTDSATQWSLTSVETVQPASTEVETSQPAPME 151
Cdd:PRK07003 395 AVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADS 474

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 159110803 152 AETSQPAPmeaetSQPAPMEAETSQPAPMEADTSQPAPMEADTSKPAPTEAETSKPAPTEAETSQPAPNEA 222
Cdd:PRK07003 475 GSASAPAS-----DAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAAAAPPAPEARPPTPAAA 540
Agg_substance NF033875
LPXTG-anchored aggregation substance; Aggregation substances, as described in Enterococcus, ...
 115-254 5.23e-06

LPXTG-anchored aggregation substance; Aggregation substances, as described in Enterococcus, are LPXTG-anchored large surface proteins that contribute to virulence. Several closely related paralogs may be found in a single strain.


Pssm-ID: 411439 [Multi-domain]  Cd Length: 1306  Bit Score: 48.94  E-value: 5.23e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803  115 AVGmLSTDSATQWSLTS---VETVQPASTEVETSQPAPMEAETSQPAPMEAETSQPAPME--------AETSQPAPMEAD 183
Cdd:NF033875   33 VVG-LATDNVQAAELDTqpgTTTVQPDNPDPQSGSETPKTAVSEEATVQKDTTSQPTKVEevasekngAEQSSATPNDTT 111

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 159110803  184 TSQPAPMEADTS---KPAPTEAETSKP--APTEAetsQPAPNEAETSKPAPTEAETSKPAPTEAETTQLPRIQAVK 254
Cdd:NF033875  112 NAQQPTVGAEKSaqeQPVVSPETTNEPlgQPTEV---APAENEANKSTSIPKEFETPDVDKAVDEAKKDPNITVVE 184
PRK11633 PRK11633
cell division protein DedD; Provisional
 157-252 8.41e-06

cell division protein DedD; Provisional


Pssm-ID: 236940 [Multi-domain]  Cd Length: 226  Bit Score: 46.53  E-value: 8.41e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 157 PAPMEAETSQPAPMEAETSQPAPMEADTSQPAPMEADTSKPAPTEAETSKPAPTEAETSQPAPNEAETSKPAPTEAETSK 236
Cdd:PRK11633  57 PAATQALPTQPPEGAAEAVRAGDAAAPSLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQKVEAPPAPKPEPK 136

                         90
                 ....*....|....*.
gi 159110803 237 PaptEAETTQLPRIQA 252
Cdd:PRK11633 137 P---VVEEKAAPTGKA 149
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
137-352 9.20e-06

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 47.95  E-value: 9.20e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 137 PASTEVETSQPAPMEAETSQPAPMEAETSQPAPMEAETSQPAPMEADTS-QPAPMEADTSKPAPTEAETSKPAPTEAETS 215
Cdd:PRK12323 377 AAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARrSPAPEALAAARQASARGPGGAPAPAPAPAA 456

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 216 QPAPNEAETSKPAPTEAETSKPAPTEAETTQLPRIQAVKTLFTTSAATEVPSTEPTTMETASTESNESTIflgPSVTHLP 295
Cdd:PRK12323 457 APAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESI---PDPATAD 533

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 159110803 296 DSGLKKGLIVTPGNSPAPTLPGSSDliPVKQCLLIILILASLATIFLVCTVVLAVRL 352
Cdd:PRK12323 534 PDDAFETLAPAPAAAPAPRAAAATE--PVVAPRPPRASASGLPDMFDGDWPALAARL 588
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 166-266 9.51e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 47.96  E-value: 9.51e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803  166 QPAPMEAETSQPAPMEADTSQPAPMEADTSKPAPTEAETSKPAPT--EAETSQPAPNEAETSKPAPTEAETSKPAPTEAE 243
Cdd:PRK12270   37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAapPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDE 116

                          90       100
                  ....*....|....*....|....*
gi 159110803  244 TTQLPRIQA--VKTLfttSAATEVP 266
Cdd:PRK12270  117 VTPLRGAAAavAKNM---DASLEVP 138
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
108-284 9.76e-06

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 47.92  E-value: 9.76e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 108 APGTGGTAVGMLSTDSATQWSLTSVETVQPASTEVETSQPAPMEAETSQPAPMEAETSQPAPMEAETSQPAPMEADTSQP 187
Cdd:PRK07003 361 AVTGGGAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGD 440

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 188 APMEADTSKPAPTEAETSKPAPTEAETSQPAPNEAETSKPAPT--EAETSKPAPTEAETTQ--LPRIQAVKTLFTTSAAT 263
Cdd:PRK07003 441 DAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDapPDAAFEPAPRAAAPSAatPAAVPDARAPAAASRED 520

                        170       180
                 ....*....|....*....|.
gi 159110803 264 EVPSTEPTTMETASTESNEST 284
Cdd:PRK07003 521 APAAAAPPAPEARPPTPAAAA 541
PRK11633 PRK11633
cell division protein DedD; Provisional
 137-230 1.01e-05

cell division protein DedD; Provisional


Pssm-ID: 236940 [Multi-domain]  Cd Length: 226  Bit Score: 46.53  E-value: 1.01e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 137 PASTEVETSQPAPMEAETSQPAPMEAETSQPAPMEAETSQPAPMEADTSQPAPMEADTSKPAPTEAETSKPAPTEAETSQ 216
Cdd:PRK11633  57 PAATQALPTQPPEGAAEAVRAGDAAAPSLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQKVEAPPAPKPEPK 136

                         90
                 ....*....|....
gi 159110803 217 PAPNEaetsKPAPT 230
Cdd:PRK11633 137 PVVEE----KAAPT 146
PRK13914 PRK13914
invasion associated endopeptidase;
65-284 1.14e-05

invasion associated endopeptidase;


Pssm-ID: 237555 [Multi-domain]  Cd Length: 481  Bit Score: 47.49  E-value: 1.14e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803  65 KNVTNTVAAHPELPTTVVMLERDSTSAGTSERATEKIATTDP---TAPGTGGTAVGMLSTDSATQWSLTSVETVQPASTE 141
Cdd:PRK13914 137 KYLTDKVTSTPVAPTQEVKKETTTQQAAPAAETKTEVKQTTQattPAPKVAETKETPVVDQNATTHAVKSGDTIWALSVK 216

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 142 VETSQPAPMEAETSQPAPMEAETSQPAPMEAETSQPapmEADTSQPAPMEADTSKPAPTEAETSKPAPTEAETSQpapNE 221
Cdd:PRK13914 217 YGVSVQDIMSWNNLSSSSIYVGQKLAIKQTANTATP---KAEVKTEAPAAEKQAAPVVKENTNTNTATTEKKETT---TQ 290

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 159110803 222 AETSKPAPTEAETSKPAPTEAETTQLPRIQAVKTLFTTSAATevPSTEPTTMETASTESNEST 284
Cdd:PRK13914 291 QQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTST--PSKNTNTNTNSNTNTNSNT 351
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
109-282 1.19e-05

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 47.56  E-value: 1.19e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 109 PGTGGTAVGMLSTDSATQWSLTSVETVQPASTEVETSQPAPMEAETSQPAPMEAETSQPAPMeaetsQPAPMEADTSQPA 188
Cdd:PRK12323 365 PGQSGGGAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARR-----SPAPEALAAARQA 439

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 189 PMEADTSKPAPTEAETSKPAPTEA-ETSQPAPNEAETSKPAPTEAETSKPAPTEAET---TQLPRIQAVKTLFTTSAATE 264
Cdd:PRK12323 440 SARGPGGAPAPAPAPAAAPAAAARpAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPppwEELPPEFASPAPAQPDAAPA 519

                        170
                 ....*....|....*...
gi 159110803 265 VPSTEPTTMETASTESNE 282
Cdd:PRK12323 520 GWVAESIPDPATADPDDA 537
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 136-271 1.23e-05

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 47.55  E-value: 1.23e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 136 QPASTEVETSQPAPMEAETSQPAPMEAETSQPAPM---EAETSQPAPMEADTSQPAPMEADTSKPAPTEAETSKPAPTEA 212
Cdd:PRK07994 367 EPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPppaSAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKKSEPAAA 446

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 159110803 213 ETSQPAPNEAETSKPAPTEAETSKPAPTEAE----TTQLPRIQAVKTLFTTSAATEVPSTEPT 271
Cdd:PRK07994 447 SRARPVNSALERLASVRPAPSALEKAPAKKEayrwKATNPVEVKKEPVATPKALKKALEHEKT 509
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
91-242 1.60e-05

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 47.15  E-value: 1.60e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803  91 AGTSERATEKIATTDPTAPGTGGTAVGMLSTDSATQWSLTSVET----VQPASTEVETSQPAPMEAETSQPAPMEAET-- 164
Cdd:PRK07003 382 APGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAppaaPAPPATADRGDDAADGDAPVPAKANARASAds 461

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 165 ------SQPAPMEAETSQPAPmeadtSQPAPMEADTSKPAPTEAETSKPAPTEAETSQPAPNEAETSKPAPTEAETSKPA 238
Cdd:PRK07003 462 rcderdAQPPADSGSASAPAS-----DAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAAAAPPAPEARPPT 536


                 ....
gi 159110803 239 PTEA 242
Cdd:PRK07003 537 PAAA 540
PHA03378 PHA03378
EBNA-3B; Provisional
 146-302 5.98e-05

EBNA-3B; Provisional


Pssm-ID: 223065 [Multi-domain]  Cd Length: 991  Bit Score: 45.44  E-value: 5.98e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 146 QPAPMEAETSQP---APMEAETSQPAPMEAETSQPAPMEADTSQPAPMEADTSKPAPTEAETSKPAPTEAETSQPAPNEA 222
Cdd:PHA03378 675 QPSPTGANTMLPiqwAPGTMQPPPRAPTPMRPPAAPPGRAQRPAAATGRARPPAAAPGRARPPAAAPGRARPPAAAPGRA 754

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 223 ETSKPAPTEAETSKPAPTEAETTQLPRIQAVKTLFTTSAATEVPSTE--PTTMETASTESNESTIFLGPSVTHLPDSGLK 300
Cdd:PHA03378 755 RPPAAAPGRARPPAAAPGAPTPQPPPQAPPAPQQRPRGAPTPQPPPQagPTSMQLMPRAAPGQQGPTKQILRQLLTGGVK 834


                 ..
gi 159110803 301 KG 302
Cdd:PHA03378 835 RG 836
PHA03378 PHA03378
EBNA-3B; Provisional
 126-251 6.30e-05

EBNA-3B; Provisional


Pssm-ID: 223065 [Multi-domain]  Cd Length: 991  Bit Score: 45.44  E-value: 6.30e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 126 QWSLTSVETVQPASTEVETSQPAPMEAETSQPAPMEAETSQPAPMEAETSQPAPMEADTSQPAPMEADTSKPAPT----- 200
Cdd:PHA03378 688 QWAPGTMQPPPRAPTPMRPPAAPPGRAQRPAAATGRARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGrarpp 767

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 159110803 201 EAETSKPAPTEAETSQPAPNEAETSKPAPTEAETSKPAPTEAETTQLPRIQ 251
Cdd:PHA03378 768 AAAPGAPTPQPPPQAPPAPQQRPRGAPTPQPPPQAGPTSMQLMPRAAPGQQ 818
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
71-246 6.34e-05

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 45.25  E-value: 6.34e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803  71 VAAHPELPTTVVMLERDSTSAGTSERATEKIATTDPTAPGTGGTAVGMLSTDSATQWS-LTSVETVQPASTEVETSQPAP 149
Cdd:PRK12323 383 AQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASaRGPGGAPAPAPAPAAAPAAAA 462

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 150 MEAeTSQPAPMEAETSQPAPMEAETSQPAPMEADTSQPAPMEADTSKPAPTEAETSKPAPTEAETSQPAPNEAETSKPAP 229
Cdd:PRK12323 463 RPA-AAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPATADPDDAFETL 541

                        170
                 ....*....|....*..
gi 159110803 230 TEAETSKPAPTEAETTQ 246
Cdd:PRK12323 542 APAPAAAPAPRAAAATE 558
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 145-239 6.68e-05

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 45.36  E-value: 6.68e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 145 SQPAPMEAETSQPAPMEAETSQPAPMEAETSQPAPMEADTSQPAPMEADTSkPAPTEAETSKPAPTEAETSQPAPNEAET 224
Cdd:PRK07764 409 APAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPA-AAPSAQPAPAPAAAPEPTAAPAPAPPAA 487

                         90
                 ....*....|....*
gi 159110803 225 SKPAPTEAETSKPAP 239
Cdd:PRK07764 488 PAPAAAPAAPAAPAA 502
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 109-256 8.31e-05

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 44.71  E-value: 8.31e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 109 PGTGGTAVGMLSTDSATQWSLTSVETVQPASTEVETSqPAPMEAETSQPAPMEAETSQPAPmEAETSQPAPMEADTSQPA 188
Cdd:PRK14951 366 PAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPA-PAAAPAAAASAPAAPPAAAPPAP-VAAPAAAAPAAAPAAAPA 443

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 189 PMEADTSKPAPTEAETSK-PAPTEAETSQPAPNEAETSKPAPTEAETSKPAPT-EAETTQLPRIQAVKTL 256
Cdd:PRK14951 444 AVALAPAPPAQAAPETVAiPVRVAPEPAVASAAPAPAAAPAAARLTPTEEGDVwHATVQQLAAAEAITAL 513
rne PRK10811
ribonuclease E; Reviewed
 70-250 8.81e-05

ribonuclease E; Reviewed


Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 45.03  E-value: 8.81e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803   70 TVAAHPELPTTVVMLERDSTSAGTSERATEKIATTDPTapgtggtavgmlsTDSATQWSLTSVETVQPASTEVE-TSQPA 148
Cdd:PRK10811  863 EVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEPVV-------------VAEPQPEEVVVVETTHPEVIAAPvTEQPQ 929

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803  149 PMEAETSQPAPMEAETSQPAPMEAETSQPAPMEADTSQPAPMEADTSKPAPTEAETSKPAPTEAETSQPAPNEAETSKPA 228
Cdd:PRK10811  930 VITESDVAVAQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQVPEA 1009

                         170       180
                  ....*....|....*....|....*...
gi 159110803  229 PTEAE------TSKPAPteAETTQLPRI 250
Cdd:PRK10811 1010 TVEHNhatapmTRAPAP--EYVPEAPRH 1035
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 151-236 8.93e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 44.88  E-value: 8.93e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803  151 EAETSQPAPMEAETSQPAPMEAETSQPAPMEADTSQPAPMEADTSKPAPTEAETSKPAPTEAETSQPAPNEAETSKPAPT 230
Cdd:PRK12270   34 ADYGPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAV 113


                  ....*.
gi 159110803  231 EAETSK 236
Cdd:PRK12270  114 EDEVTP 119
NDFIP2 cd22306
NEDD4 family-interacting protein 2; The NEDD4 (neural precursor cell expressed, ...
 151-243 1.29e-04

NEDD4 family-interacting protein 2; The NEDD4 (neural precursor cell expressed, developmentally down-regulated protein 4)-family interacting proteins (NDFIPs) are adaptor proteins that recruit NEDD4 E3 ligases to specific substrate proteins, which leads to the ubiquitylation and subsequent degradation of these proteins. They also act as activators of the E3 ligase activity by releasing NEDD4 ligase from its auto-inhibitory conformation. NDFIP2 may play a role in protein trafficking.


Pssm-ID: 412070 [Multi-domain]  Cd Length: 229  Bit Score: 42.95  E-value: 1.29e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 151 EAETSQPAPMEAETSQPAPMEAetSQPAPMEADTSQPAPMEADTSKPAPTEAETSK-----PAPTEAETSQPAPNEAETS 225
Cdd:cd22306   10 EDDPSESSASEQPSTSTQVQES--SSNPAPETDAPPPPYSSITAGATAAPGTETQSefypvPPPYSVATSLPTYDEAEKA 87

                         90
                 ....*....|....*...
gi 159110803 226 KPAPTEAETSKPAPTEAE 243
Cdd:cd22306   88 KAAAMAAAAAEVAQREEE 105
PHA03247 PHA03247
large tegument protein UL36; Provisional
 60-299 1.49e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 44.16  E-value: 1.49e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803   60 PPELLKNVTNTVAAHPELPTTVVMLERDSTSAGTSERATEKIATTDP----TAPGTGGTAVGMLSTDSATQWSLTSVETV 135
Cdd:PHA03247 2733 PALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPprrlTRPAVASLSESRESLPSPWDPADPPAAVL 2812

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803  136 QPASTEVETSQPAPMEAETSQPAPMEAETSQPAPMEAET----------------SQPAPMEADT---------SQPAPM 190
Cdd:PHA03247 2813 APAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPlggsvapggdvrrrppSRSPAAKPAAparppvrrlARPAVS 2892

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803  191 EADTSKPAPTEAETSKPAPTEAETSQPAPNEAETSKPAPTEAETSKPAPTEAETTQ---LPRIQAVKTLFTTSAATEVPS 267
Cdd:PHA03247 2893 RSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDpagAGEPSGAVPQPWLGALVPGRV 2972

                         250       260       270
                  ....*....|....*....|....*....|..
gi 159110803  268 TEPTTMETASTESNESTIFLGPSVTHLPDSGL 299
Cdd:PHA03247 2973 AVPRFRVPQPAPSREAPASSTPPLTGHSLSRV 3004
PHA03247 PHA03247
large tegument protein UL36; Provisional
 102-245 1.88e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 44.16  E-value: 1.88e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803  102 ATTDPTAPGTGGTAVGMLSTDSATQWSLTSveTVQPASTEVETSQPAPmeAETSQPAPMEAETSQPAPmeaetSQPAPME 181
Cdd:PHA03247 2718 ATPLPPGPAAARQASPALPAAPAPPAVPAG--PATPGGPARPARPPTT--AGPPAPAPPAAPAAGPPR-----RLTRPAV 2788

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 159110803  182 ADTSQPAPMEADTSKPAPTEAETSKPAPTEAETSQPAPNEAETSKPAPTEAETSKPAPTEAETT 245
Cdd:PHA03247 2789 ASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPL 2852
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 97-256 1.95e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 43.82  E-value: 1.95e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803  97 ATEKIATTDPTAPGTGGTAVGMLSTDSATQWSLTSVETVQPASTEVETSQPAPMEAETSQPAPMEAETSQPaPMEAETSQ 176
Cdd:PRK07764 651 EHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQP-PQAAQGAS 729

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 177 PAPMEADTSQPAPMEADTSKPAPTEAETSKPAPTEAETSQPAPNEAETSKPAPTEAETSKPAPTEAETTQLPRIQAVKTL 256
Cdd:PRK07764 730 APSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAPSMDDEDRRDAEEVAMELL 809
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 93-253 1.97e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 43.82  E-value: 1.97e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803  93 TSERATEKIATTDPTAPGTGGTAVGMLSTDSATQWSLTSVETVQPASTEVETSQPAPMEAETSQPAPMEAETSQPAPMEA 172
Cdd:PRK07764 617 APAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGA 696

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 173 ETSQPAPMEADTSQPAPMEADTSKPAPTEAETSKPAPTEAETSQPAPNEAETSKPAPTEAETSKPAPTEAETTQLPRIQA 252
Cdd:PRK07764 697 APAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPP 776


                 .
gi 159110803 253 V 253
Cdd:PRK07764 777 S 777
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 136-243 2.27e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 43.44  E-value: 2.27e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 136 QPASTEVETSQPAPMEAETSQPAPMEAETSQPAPMEAETSQPAPMEADTSQPAPMEADTSKPAPTEAE-TSKPAPTEAET 214
Cdd:PRK07764 396 AAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSaQPAPAPAAAPE 475

                         90       100
                 ....*....|....*....|....*....
gi 159110803 215 SQPAPNEAETSKPAPtEAETSKPAPTEAE 243
Cdd:PRK07764 476 PTAAPAPAPPAAPAP-AAAPAAPAAPAAP 503
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 136-226 2.77e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 43.34  E-value: 2.77e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803  136 QPASTEVETSQPAPMEAETSQPAPMEAETSQPAPMEAETSQPAPmeadTSQPAPmeadTSKPAPTEAETSKPAPTEAETS 215
Cdd:PRK12270   37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAP----AAPPKP----AAAAAAAAAPAAPPAAAAAAAP 108

                          90
                  ....*....|.
gi 159110803  216 QPAPNEAETSK 226
Cdd:PRK12270  109 AAAAVEDEVTP 119
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 145-270 2.91e-04

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 43.16  E-value: 2.91e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 145 SQPAPMEAETSQPAPMEAETSQPAPME----AETSQPAPMEADTSQPAPMEADTSKPAPTEAETSKPAPTEAETSQPAPN 220
Cdd:PRK14951 369 AAEAAAPAEKKTPARPEAAAPAAAPVAqaaaAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALA 448

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 159110803 221 EAETSKPAPTEAETSKPAPTEAETTQLPRIQAvktlfTTSAATEVPSTEP 270
Cdd:PRK14951 449 PAPPAQAAPETVAIPVRVAPEPAVASAAPAPA-----AAPAAARLTPTEE 493
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
106-243 3.15e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 42.91  E-value: 3.15e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 106 PTAPGTGGTAVGMLSTDSATQWSLTSVETVQPASTEVETSQPAPMEAETSQPAPMEAETSQPAPMEAETSQPAPMEADTS 185
Cdd:PRK07003 383 PGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSR 462

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 159110803 186 QPAPMEADTSKPAPTEAETS-KPAPTEAETSQPAPNEAETSKPAPTEAETSKPAPTEAE 243
Cdd:PRK07003 463 CDERDAQPPADSGSASAPASdAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDA 521
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
72-252 3.18e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 42.94  E-value: 3.18e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803  72 AAHPELPTTVVMLERDSTSAGTSERATEKIATTDPTAPGTGGTAVGMLSTDSATQWSLTSVETVQPASTEVETSQPAPME 151
Cdd:PRK12323 404 AAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARA 483

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 152 AETSQPAPMEAETSQPAPMEAETSQPAPMEADTSQPAPMEADTSKPAPTEAETSKPAPTEAETSQPAPNEAETSKP--AP 229
Cdd:PRK12323 484 APAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPvvAP 563

                        170       180
                 ....*....|....*....|...
gi 159110803 230 TEAETSKPAPTEAETTQLPRIQA 252
Cdd:PRK12323 564 RPPRASASGLPDMFDGDWPALAA 586
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 144-243 3.26e-04

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 42.87  E-value: 3.26e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 144 TSQPAPMEAETSQPAPmEAETSQPAPMEAetsqPAPMEADTSQPAPMEADTSKPAPTEAETSKPAPTeaETSQPAPNEAE 223
Cdd:PRK14950 361 VPVPAPQPAKPTAAAP-SPVRPTPAPSTR----PKAAAAANIPPKEPVRETATPPPVPPRPVAPPVP--HTPESAPKLTR 433

                         90       100
                 ....*....|....*....|
gi 159110803 224 TSKPAPTEAETSKPAPTEAE 243
Cdd:PRK14950 434 AAIPVDEKPKYTPPAPPKEE 453
PRK11907 PRK11907
bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;
154-258 3.86e-04

bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;


Pssm-ID: 237019 [Multi-domain]  Cd Length: 814  Bit Score: 42.92  E-value: 3.86e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 154 TSQPAPMEAETSQPAP-MEAETSQPAPMEADTSQPAPmeadtSKPAPTEAETSKPAPTEAETSQPAPNEAETS------K 226
Cdd:PRK11907  21 SNPKLAQAEEIVTTTPaTSTEAEQTTPVESDATEEAD-----NTETPVAATTAAEAPSSSETAETSDPTSEATdtttseA 95

                         90       100       110
                 ....*....|....*....|....*....|..
gi 159110803 227 PAPTEAETSKPAPTEAETTQLpRIQAVKTLFT 258
Cdd:PRK11907  96 RTVTPAATETSKPVEGQTVDV-RILSTTDLHT 126
PRK08691 PRK08691
DNA polymerase III subunits gamma and tau; Validated
 148-283 3.88e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236333 [Multi-domain]  Cd Length: 709  Bit Score: 42.77  E-value: 3.88e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 148 APMEAETSQPAPMEAETSQPAPmeaeTSQPAPMEADTSQPAPMEADTSKPAPTEAETSKPAPTEAETSQPAPNEAETSKP 227
Cdd:PRK08691 359 APLAAASCDANAVIENTELQSP----SAQTAEKETAAKKPQPRPEAETAQTPVQTASAAAMPSEGKTAGPVSNQENNDVP 434

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 159110803 228 aPTEAetskpAPTEAETTQLPRIQAVKTLFTTSAATEVPSTEPTTMETASTESNES 283
Cdd:PRK08691 435 -PWED-----APDEAQTAAGTAQTSAKSIQTASEAETPPENQVSKNKAADNETDAP 484
PRK14971 PRK14971
DNA polymerase III subunit gamma/tau;
140-274 3.97e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237874 [Multi-domain]  Cd Length: 614  Bit Score: 42.46  E-value: 3.97e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 140 TEVETSQPAPMEAETSQPAPMEAETSQPAPMEAETSQPAPMEADTSQP-APMEADTSKPAPTEAETSKPAPTEAETSQPA 218
Cdd:PRK14971 364 QKGDDASGGRGPKQHIKPVFTQPAAAPQPSAAAAASPSPSQSSAAAQPsAPQSATQPAGTPPTVSVDPPAAVPVNPPSTA 443

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 159110803 219 PNEAetskPAPTEAETSKPAPTEAETTQLPRIQAVKTlfTTSAATEVPSTEPTTME 274
Cdd:PRK14971 444 PQAV----RPAQFKEEKKIPVSKVSSLGPSTLRPIQE--KAEQATGNIKEAPTGTQ 493
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 135-246 4.89e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 42.28  E-value: 4.89e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 135 VQPASTEVETSQPAPMEAETSQPAPMEAETSQPAPMEAETSQPAPMEADTSQPAPMEADTSKPAPTEAETSK---PAPTE 211
Cdd:PRK07764 385 LGVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPppaAAPSA 464

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 159110803 212 AETSQPAPNEAETSKPAPTEAETSKPAPTEAETTQ 246
Cdd:PRK07764 465 QPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAA 499
PHA03269 PHA03269
envelope glycoprotein C; Provisional
 119-217 5.15e-04

envelope glycoprotein C; Provisional


Pssm-ID: 165527 [Multi-domain]  Cd Length: 566  Bit Score: 42.41  E-value: 5.15e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 119 LSTDSATQWSLTSVETVQPAS---------TEVETSQPAPMEAETSQ--------PAPMEAETSQPAPMEAETS----QP 177
Cdd:PHA03269  31 LHTSAATQKPDPAPAPHQAASrapdpavapTSAASRKPDLAQAPTPAasekfdpaPAPHQAASRAPDPAVAPQLaaapKP 110

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
gi 159110803 178 APMEADTSQPAPMEADTSKPAPTEAETSKPAPTEAETSQP 217
Cdd:PHA03269 111 DAAEAFTSAAQAHEAPADAGTSAASKKPDPAAHTQHSPPP 150
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 147-304 8.33e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 41.77  E-value: 8.33e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 147 PAPMEAETSQPAPMEAETSQPAPMEAETSQPAPMEADTSQPAPMEADTSKPAPTEAETSKPAPTEAETSQPAPNEAETSK 226
Cdd:PRK07994 361 PAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKK 440

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 159110803 227 PAPTEAETSKPAPTEAETTQLPRiQAVKTLFTTSAATEVPSTEPTTMETASTESNESTIFLGPSVTHLPDSGLKKGLI 304
Cdd:PRK07994 441 SEPAAASRARPVNSALERLASVR-PAPSALEKAPAKKEAYRWKATNPVEVKKEPVATPKALKKALEHEKTPELAAKLA 517
PRK11633 PRK11633
cell division protein DedD; Provisional
 136-219 9.81e-04

cell division protein DedD; Provisional


Pssm-ID: 236940 [Multi-domain]  Cd Length: 226  Bit Score: 40.37  E-value: 9.81e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 136 QPASTEVETSQPAPMEAETSQPAPMEAETSQPAPMEAETSQPAPMEADTSQPAPMEADTSKPAPTEAETSKPAPTEaets 215
Cdd:PRK11633  66 QPPEGAAEAVRAGDAAAPSLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQKVEAPPAPKPEPKPVVEE---- 141


                 ....
gi 159110803 216 QPAP 219
Cdd:PRK11633 142 KAAP 145
PRK10819 PRK10819
transport protein TonB; Provisional
 131-245 1.01e-03

transport protein TonB; Provisional


Pssm-ID: 236768 [Multi-domain]  Cd Length: 246  Bit Score: 40.44  E-value: 1.01e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 131 SVETVQPASTEVETSQPAPMEaetsqPAPMEAETSQPAPmEAETSQPAPMEADTSQPAPMEADTSKPAPTEAETSKPAPT 210
Cdd:PRK10819  49 SVTMVAPADLEPPQAVQPPPE-----PVVEPEPEPEPIP-EPPKEAPVVIPKPEPKPKPKPKPKPKPVKKVEEQPKREVK 122

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 159110803 211 EAETSQPAPNEAET-SKPAPTEAETSKPAPTEAETT 245
Cdd:PRK10819 123 PVEPRPASPFENTApARPTSSTATAAASKPVTSVSS 158
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 133-215 1.05e-03

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 41.41  E-value: 1.05e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803  133 ETVQPASTEVETSQPAPMEAETSQPAPMEAETSQPAPMEAETSQPAPmeadTSQPAPMEADTSKPAPTEAETSKPAPTEA 212
Cdd:PRK12270   40 STAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKP----AAAAAAAAAPAAPPAAAAAAAPAAAAVED 115


                  ...
gi 159110803  213 ETS 215
Cdd:PRK12270  116 EVT 118
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 128-223 1.30e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 40.95  E-value: 1.30e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 128 SLTSVETVQPASTEVETSQPA-PMEAETSQPAPMEAETSQPAPMEAETSQPAPMEADTSQPAPMEadTSKPAPTEAETSK 206
Cdd:PRK14950 359 LLVPVPAPQPAKPTAAAPSPVrPTPAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPH--TPESAPKLTRAAI 436

                         90
                 ....*....|....*..
gi 159110803 207 PAPTEAETSQPAPNEAE 223
Cdd:PRK14950 437 PVDEKPKYTPPAPPKEE 453
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 90-219 1.34e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 40.85  E-value: 1.34e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803  90 SAGTSERATEKIATTDPTAPGTGGTAVGMLSTDSAtqwSLTSVETVQPASTEVETSQPAPMEAETSQPAPMEAETSQPAP 169
Cdd:PRK14951 368 AAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPA---PAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAA 444

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 159110803 170 MEAETSQPAPMEADTSQPAPMEADtsKPAPTEAETSKPAPTEAETSQPAP 219
Cdd:PRK14951 445 VALAPAPPAQAAPETVAIPVRVAP--EPAVASAAPAPAAAPAAARLTPTE 492
PRK11907 PRK11907
bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;
107-214 1.41e-03

bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;


Pssm-ID: 237019 [Multi-domain]  Cd Length: 814  Bit Score: 40.99  E-value: 1.41e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 107 TAPGTGGTAVGMLSTDSAtqwslTSVETVQPASTEVETSQPAPmeaETSQPAPMEAETSQPAPME-AETSQPAPMEADTs 185
Cdd:PRK11907  20 ASNPKLAQAEEIVTTTPA-----TSTEAEQTTPVESDATEEAD---NTETPVAATTAAEAPSSSEtAETSDPTSEATDT- 90

                         90       100
                 ....*....|....*....|....*....
gi 159110803 186 qpapmeADTSKPAPTEAETSKPAPTEAET 214
Cdd:PRK11907  91 ------TTSEARTVTPAATETSKPVEGQT 113
PRK14971 PRK14971
DNA polymerase III subunit gamma/tau;
84-233 1.64e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237874 [Multi-domain]  Cd Length: 614  Bit Score: 40.53  E-value: 1.64e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803  84 LERDSTSAGTSERATEKIATTDPTAPgtggtavgmlstdsaTQWSLTSVETVQPASTEVETSQPAPMEAETSQPAPMEAE 163
Cdd:PRK14971 364 QKGDDASGGRGPKQHIKPVFTQPAAA---------------PQPSAAAAASPSPSQSSAAAQPSAPQSATQPAGTPPTVS 428

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 164 TSQPAPMEAETSQPAPMEADTSQPAPmeadtSKPAPTEAETSKPAPTEAETSQPAPNEAETSKPAPTEAE 233
Cdd:PRK14971 429 VDPPAAVPVNPPSTAPQAVRPAQFKE-----EKKIPVSKVSSLGPSTLRPIQEKAEQATGNIKEAPTGTQ 493
PRK11633 PRK11633
cell division protein DedD; Provisional
 132-210 1.65e-03

cell division protein DedD; Provisional


Pssm-ID: 236940 [Multi-domain]  Cd Length: 226  Bit Score: 39.60  E-value: 1.65e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 159110803 132 VETVQPASTEVETSQPAPMEAETSQPAPMEAETSQPAPMEAETSQPAPMEADTSQPAPMEADTSKPAPTEaetsKPAPT 210
Cdd:PRK11633  72 AEAVRAGDAAAPSLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQKVEAPPAPKPEPKPVVEE----KAAPT 146
Herpes_BLLF1 pfam05109
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...
 54-283 1.75e-03

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.


Pssm-ID: 282904 [Multi-domain]  Cd Length: 886  Bit Score: 40.67  E-value: 1.75e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803   54 YTYNTDPPELLKNVTNTVAAHPELPTTVVMLERDSTSAGTSERATEKIATTDPTAPGTGGTAVGMLSTDSATQWSLTSVE 133
Cdd:pfam05109 366 WTLTSGTPSGCENISGAFASNRTFDITVSGLGTAPKTLIITRTATNATTTTHKVIFSKAPESTTTSPTLNTTGFAAPNTT 445

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803  134 TVQPASTEVETSQPAPmeaETSQPAPMEAETSQPAPmEAETSQPAPMeadTSQPAPMEADTSKPAPTEAETSKPAPTEAE 213
Cdd:pfam05109 446 TGLPSSTHVPTNLTAP---ASTGPTVSTADVTSPTP-AGTTSGASPV---TPSPSPRDNGTESKAPDMTSPTSAVTTPTP 518

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 159110803  214 TSQPAPNEAETSKPAPTEAETSKPAPTEAETTQLPR----IQAVKTLFTTSAATEVPSTEPTTMETASTESNES 283
Cdd:pfam05109 519 NATSPTPAVTTPTPNATSPTLGKTSPTSAVTTPTPNatspTPAVTTPTPNATIPTLGKTSPTSAVTTPTPNATS 592
Cuticle_3 pfam11018
Pupal cuticle protein C1; Insect cuticles are composite structures whose mechanical properties ...
 155-267 1.77e-03

Pupal cuticle protein C1; Insect cuticles are composite structures whose mechanical properties are optimized for biological function. The major components are the chitin filament system and the cuticular proteins, and the cuticle's properties are determined largely by the interactions between these two sets of molecules. The proteins can be ordered by species.


Pssm-ID: 431611 [Multi-domain]  Cd Length: 182  Bit Score: 39.37  E-value: 1.77e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803  155 SQPAPMEAETSQPAPMEAETSQ----PAPMEADTSQPAPMEADTSKPAPTEAETSKPAPTEAETSQPAPNEAETSKPAPT 230
Cdd:pfam11018  53 SAPAPVVTKSAYAAPAPVVTTYahaaPAPVVAKTVYAAPAVVVYAAPAPVVAKTVTYAAPAVHYAAPAPVVAKTVYAAPA 132

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 159110803  231 EAETSKPAPTEAETTQLPRIQAVKTLFTTSAATEVPS 267
Cdd:pfam11018 133 VQHYAAPAPVEAAAHAAPVVAAAPAAYVKYSPAVVVA 169
PRK13042 PRK13042
superantigen-like protein SSL4; Reviewed;
115-201 1.81e-03

superantigen-like protein SSL4; Reviewed;


Pssm-ID: 183854 [Multi-domain]  Cd Length: 291  Bit Score: 40.00  E-value: 1.81e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 115 AVGMLSTDSATQWSLTSVETVqPASTEVETSQPAPMEAETSQPAPMEAETSQPAP-MEAETSQPAPMEADTSQPAPMEAD 193
Cdd:PRK13042  12 ALGLLTTGVITTTTQAANATT-PSSTKVEAPQSTPPSTKVEAPQSKPNATTPPSTkVEAPQQTPNATTPSSTKVETPQSP 90


                 ....*...
gi 159110803 194 TSKPAPTE 201
Cdd:PRK13042  91 TTKQVPTE 98
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 171-244 2.33e-03

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 40.26  E-value: 2.33e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 159110803  171 EAETSQPAPMEADTSQPAPMEADTSKPAPTEAETSKPAPTEAETSQPAPNEAETSKPAPTEAETSKPAPTEAET 244
Cdd:PRK12270   34 ADYGPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAA 107
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
146-249 2.78e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 39.86  E-value: 2.78e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 146 QPAPMEAETSQPAPMEAETSQPAPMEAETSQPAPMEADTSQPAPMEADTSKPAPTEAETS---KPAPTEAETSQPAPNEA 222
Cdd:PRK12323 364 RPGQSGGGAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAParrSPAPEALAAARQASARG 443

                         90       100
                 ....*....|....*....|....*..
gi 159110803 223 ETSKPAPTEAETSKPAPTEAETTQLPR 249
Cdd:PRK12323 444 PGGAPAPAPAPAAAPAAAARPAAAGPR 470
DamX COG3266
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...
 58-262 3.06e-03

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442497 [Multi-domain]  Cd Length: 455  Bit Score: 39.83  E-value: 3.06e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803  58 TDPPELLKNVTNTVAAHPELPTTVVMLERDSTSAGTSERATEKIATTDPTAPGTGGTAVGMLSTDSATQWSLTSVETVQP 137
Cdd:COG3266  162 LLLLALQDIQGTLQALGAVAALLGLRKAEEALALRAGSAAADALALLLLLLASALGEAVAAAAELAALALLAAGAAEVLT 241

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 138 ASTEVETSQPAPMEAETSQPAPMEAETSQPAPMEAETS-QPAPMEADTSQPAPMEADTSKPAPTEAETSKPAPTEAETSQ 216
Cdd:COG3266  242 ARLVLLLLIIGSALKAPSQASSASAPATTSLGEQQEVSlPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQ 321

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 159110803 217 PapneaETSKPAPTE-AETSKPAPTEAETTQLPRIQAVKTLFTTSAA 262
Cdd:COG3266  322 P-----TAAKPVVTEtAAPAAPAPEAAAAAAAPAAPAVAKKLAADEQ 363
PRK11907 PRK11907
bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;
184-279 3.29e-03

bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;


Pssm-ID: 237019 [Multi-domain]  Cd Length: 814  Bit Score: 39.84  E-value: 3.29e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 184 TSQPAPMEADTSKPAP-TEAETSKPAPTEAETSQPAPNeaetsKPAPTEAETSKPAPTEAETTQLPRIQAVKTLFTTSAA 262
Cdd:PRK11907  21 SNPKLAQAEEIVTTTPaTSTEAEQTTPVESDATEEADN-----TETPVAATTAAEAPSSSETAETSDPTSEATDTTTSEA 95

                         90
                 ....*....|....*..
gi 159110803 263 TEVPstEPTTMETASTE 279
Cdd:PRK11907  96 RTVT--PAATETSKPVE 110
PHA03378 PHA03378
EBNA-3B; Provisional
 108-249 3.44e-03

EBNA-3B; Provisional


Pssm-ID: 223065 [Multi-domain]  Cd Length: 991  Bit Score: 39.67  E-value: 3.44e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 108 APGTGGTAVGMLSTDSATQWSLTSVETVQPASTEVETSQPAPMEAETSQPAPMEAETSQPAPMEAETSQPAPMEADTSQP 187
Cdd:PHA03378 690 APGTMQPPPRAPTPMRPPAAPPGRAQRPAAATGRARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAA 769

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 159110803 188 APmeadtSKPAPTEAETSKPAPTEAETSQPAPNEAETSKPAPTEAETSKPAPTEAETTQLPR 249
Cdd:PHA03378 770 AP-----GAPTPQPPPQAPPAPQQRPRGAPTPQPPPQAGPTSMQLMPRAAPGQQGPTKQILR 826
PRK13700 PRK13700
conjugal transfer protein TraD; Provisional
 109-238 4.85e-03

conjugal transfer protein TraD; Provisional


Pssm-ID: 184256 [Multi-domain]  Cd Length: 732  Bit Score: 39.17  E-value: 4.85e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 109 PGTGGTAVGMlSTDSATQWSLTSVETVQPASTEVETSQPAPME--AETSQPAPMEAETSQPAPMEAETSQP-----APME 181
Cdd:PRK13700 515 PVRDGVSTGK-DMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVklSLKYQARPKVAPEFIPRDINPEMENRlsavlAARE 593

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 159110803 182 ADTSQPAPM-EADTSKPAPTEAETSKPAPTEAETSQPAPNEAETSKPAPTEAETSKPA 238
Cdd:PRK13700 594 AEGRQMASLfEPDVPEVASGEDVTQAEQPQQPQQPQQPQQPQQPQQPVSPVINDKKSD 651
motB PRK05996
MotB family protein;
153-269 4.98e-03

MotB family protein;


Pssm-ID: 235665 [Multi-domain]  Cd Length: 423  Bit Score: 38.91  E-value: 4.98e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 153 ETSQPAPMEAETSQPAPMEAETSQPAPMEadtsQPAPMEADTSKPAPTEAETSKPAPTEAETsQPAPNEAETSKPAPTEA 232
Cdd:PRK05996 194 TAGDLLPPGQAREQAQGAKSATAAPATVP----QAAPLPQAQPKKAATEEELIADAKKAATG-EPAANAAKAAKPEPMPD 268

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 159110803 233 ETSKPAPTEAETTQLpriQAVKTLFTTSAATEVPSTE 269
Cdd:PRK05996 269 DQQKEAEQLQAAIAQ---AIGGVAGKLAEGVTVTPVE 302
PHA03378 PHA03378
EBNA-3B; Provisional
 136-246 5.53e-03

EBNA-3B; Provisional


Pssm-ID: 223065 [Multi-domain]  Cd Length: 991  Bit Score: 39.28  E-value: 5.53e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 136 QPASTEVETSQP--APMEAETSQPAPMEAETSQP---APMEAETSQPAPMEADTSQPAPMEADTSKPAPTEAETSKPAPT 210
Cdd:PHA03378 653 QPPQVEITPYKPtwTQIGHIPYQPSPTGANTMLPiqwAPGTMQPPPRAPTPMRPPAAPPGRAQRPAAATGRARPPAAAPG 732

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 159110803 211 EAETSQPAPNEAETSKPAPTEAETSKPAPTEAETTQ 246
Cdd:PHA03378 733 RARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPA 768
PRK13335 PRK13335
superantigen-like protein SSL3; Reviewed;
101-261 5.62e-03

superantigen-like protein SSL3; Reviewed;


Pssm-ID: 139494 [Multi-domain]  Cd Length: 356  Bit Score: 38.57  E-value: 5.62e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 101 IATTDPTAPGTGGTAVGMLSTDSATQWSLTSVE------TVQPASTEVE-TSQP--APMEAETSQPAPMEAETSQPAPME 171
Cdd:PRK13335  23 VTTQSVKAEKIQSTKVDKVPTLKAERLAMINITagansaTTQAANTRQErTPKLekAPNTNEEKTSASKIEKISQPKQEE 102

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 172 AET-SQPAPMEADTSQPapmeadtskpaptEAETSKPAPTEAETSQPAPNEAETSKPAPTEAETSkPAPTEAETTQLPRI 250
Cdd:PRK13335 103 QKSlNISATPAPKQEQS-------------QTTTESTTPKTKVTTPPSTNTPQPMQSTKSDTPQS-PTIKQAQTDMTPKY 168

                        170
                 ....*....|.
gi 159110803 251 QAVKTLFTTSA 261
Cdd:PRK13335 169 EDLRAYYTKPS 179
PRK12727 PRK12727
flagellar biosynthesis protein FlhF;
86-266 5.73e-03

flagellar biosynthesis protein FlhF;


Pssm-ID: 237182 [Multi-domain]  Cd Length: 559  Bit Score: 38.82  E-value: 5.73e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803  86 RDSTSAGTSERATEKIATTDPT---APGTGGTAVGMLSTD---SATQWSLTSVETVQPASTEVETSQPAPMEAETS---- 155
Cdd:PRK12727  60 SDTPATAAAPAPAPQAPTKPAApvhAPLKLSANANMSQRQrvaSAAEDMIAAMALRQPVSVPRQAPAAAPVRAASIpspa 139

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 156 --QPAPMEAETSQPAPMEAETSQPAPMEADTSQPAPMEADTSKPAPTEAETSKPAPTEAETSQPAPNEAETSKPAPTEAE 233
Cdd:PRK12727 140 aqALAHAAAVRTAPRQEHALSAVPEQLFADFLTTAPVPRAPVQAPVVAAPAPVPAIAAALAAHAAYAQDDDEQLDDDGFD 219

                        170       180       190
                 ....*....|....*....|....*....|....*..
gi 159110803 234 TSKPAPTEAETTQLPRI----QAVKTLFTTSAATEVP 266
Cdd:PRK12727 220 LDDALPQILPPAALPPIvvapAAPAALAAVAAAAPAP 256
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 106-283 5.75e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 39.20  E-value: 5.75e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 106 PTAPGTGGTAVGMLSTDSATQWSLTSVETVQPASTEVETSQPAPMEAETSQPAPMEAETSQPAPME-----AETSQPAPM 180
Cdd:PRK07764 615 PAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAApppapAPAAPAAPA 694

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 181 EADTSQPAPMEADTSKPAPTEAETSKPAPTEAETSQPAPNEAETSKPAPTEAETSKPAPTEAETTQLPRIQAVKTLFTTS 260
Cdd:PRK07764 695 GAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAP 774

                        170       180
                 ....*....|....*....|...
gi 159110803 261 AATEVPSTEPTTMETASTESNES 283
Cdd:PRK07764 775 PPSPPSEEEEMAEDDAPSMDDED 797
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 192-273 5.85e-03

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 39.10  E-value: 5.85e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803  192 ADTSKPAPTEAETSKPAPTEAETSQPAPNEAETSKPAPTEAETSKPAPTEAETTQLPRIQAVKTLFTTSAATEVPSTEPT 271
Cdd:PRK12270   39 GSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEVT 118


                  ..
gi 159110803  272 TM 273
Cdd:PRK12270  119 PL 120
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 154-248 6.65e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 38.64  E-value: 6.65e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 154 TSQPAPMEAETSQPAPmEAETSQPAPMEAdtsqPAPMEADTSKPAPTEAETSKPAPTEAETSQPAPneAETSKPAPTEAE 233
Cdd:PRK14950 361 VPVPAPQPAKPTAAAP-SPVRPTPAPSTR----PKAAAAANIPPKEPVRETATPPPVPPRPVAPPV--PHTPESAPKLTR 433

                         90
                 ....*....|....*
gi 159110803 234 TSKPAPTEAETTQLP 248
Cdd:PRK14950 434 AAIPVDEKPKYTPPA 448
SepH NF040712
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...
 131-252 6.79e-03

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.


Pssm-ID: 468676 [Multi-domain]  Cd Length: 346  Bit Score: 38.21  E-value: 6.79e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 131 SVETVQPASTEVETSQPAPM-EAETSQPAPMEAETSQPAPMEAETSQPAPMEADTSQPAPMEADTSKPAPTEAETSKPAP 209
Cdd:NF040712 198 PLATVPRLAREPADARPEEVePAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGPGAAPAAEPDEATRDA 277

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 159110803 210 TEAETSQPAPNEAETSKPAPTEAETSKPAPTEAETTQLPRIQA 252
Cdd:NF040712 278 GEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPP 320
Herpes_BLLF1 pfam05109
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...
 68-287 6.97e-03

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.


Pssm-ID: 282904 [Multi-domain]  Cd Length: 886  Bit Score: 38.74  E-value: 6.97e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803   68 TNTVAAHPELPTTVVML-ERDSTSAGTSERATEKIATTDPTAPGTGGTAVG-MLSTDSATQWSLTSVETVQPAST---EV 142
Cdd:pfam05109 615 TPVVTSPPKNATSAVTTgQHNITSSSTSSMSLRPSSISETLSPSTSDNSTShMPLLTSAHPTGGENITQVTPASTsthHV 694

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803  143 ETSQPAPMEAETSQPAPMEAETSQPAPMEAETSQPAPMEADTSQPAPMEADTSKPAPTEAETSKPAPTEAETSQPAPNEA 222
Cdd:pfam05109 695 STSSPAPRPGTTSQASGPGNSSTSTKPGEVNVTKGTPPKNATSPQAPSGQKTAVPTVTSTGGKANSTTGGKHTTGHGART 774

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 159110803  223 ETSKPAPTEAETSKPAPTEAETTQLPRIQAVKT----LFTTSAATEVPSTEPTTMETASTESNESTIFL 287
Cdd:pfam05109 775 STEPTTDYGGDSTTPRTRYNATTYLPPSTSSKLrprwTFTSPPVTTAQATVPVPPTSQPRFSNLSMLVL 843
Cuticle_3 pfam11018
Pupal cuticle protein C1; Insect cuticles are composite structures whose mechanical properties ...
 137-245 7.19e-03

Pupal cuticle protein C1; Insect cuticles are composite structures whose mechanical properties are optimized for biological function. The major components are the chitin filament system and the cuticular proteins, and the cuticle's properties are determined largely by the interactions between these two sets of molecules. The proteins can be ordered by species.


Pssm-ID: 431611 [Multi-domain]  Cd Length: 182  Bit Score: 37.44  E-value: 7.19e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803  137 PASTEVETSQPAPMEAETSQPAPMEAETSQPAPMEAETSQPAPMEADTSQPAPMEADTSKPAPTEAETSKPAPTEAetsq 216
Cdd:pfam11018  69 PVVTTYAHAAPAPVVAKTVYAAPAVVVYAAPAPVVAKTVTYAAPAVHYAAPAPVVAKTVYAAPAVQHYAAPAPVEA---- 144

                          90       100
                  ....*....|....*....|....*....
gi 159110803  217 pAPNEAETSKPAPTEAETSKPAPTEAETT 245
Cdd:pfam11018 145 -AAHAAPVVAAAPAAYVKYSPAVVVAHAS 172
DamX COG3266
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...
 117-228 7.85e-03

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442497 [Multi-domain]  Cd Length: 455  Bit Score: 38.29  E-value: 7.85e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 117 GMLSTDSATQWSLTSVETVQPASTEVETSQPAPMEAETSQPAPMEAETSQPAPmeaeTSQPAPMEADTSQPAPMEADTSK 196
Cdd:COG3266  262 SSASAPATTSLGEQQEVSLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAP----AEAAAPQPTAAKPVVTETAAPAA 337

                         90       100       110
                 ....*....|....*....|....*....|...
gi 159110803 197 PAPTEAE-TSKPAPTEAETSQPAPNEAETSKPA 228
Cdd:COG3266  338 PAPEAAAaAAAPAAPAVAKKLAADEQWLASQPA 370
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
86-279 8.86e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 38.32  E-value: 8.86e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803  86 RDSTSAGTSERATEKIATTDPTAPGTGG--TAVGMLSTDSATQWSLTSVETVQPASTEVETSQPAPMEAE-TSQPAPMEA 162
Cdd:PRK12323 364 RPGQSGGGAGPATAAAAPVAQPAPAAAApaAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALaAARQASARG 443

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 163 ETSQPAPMEAETSQPAPMEADTSQPAPMEADTSKPAPTEAEtskPAPTEAETSQ-PAPNEAETSKPAPTEAETSKPAPTE 241
Cdd:PRK12323 444 PGGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAA---PAAAPAPADDdPPPWEELPPEFASPAPAQPDAAPAG 520

                        170       180       190
                 ....*....|....*....|....*....|....*...
gi 159110803 242 AETTQLPRIQAVKTLFTTSAATEVPSTEPTTMETASTE 279
Cdd:PRK12323 521 WVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATE 558
PHA03247 PHA03247
large tegument protein UL36; Provisional
 52-316 8.96e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 38.77  E-value: 8.96e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803   52 PDYTYNTDPPELLKNVTNTVAAHPELPTTVVMLERDSTSAGT----SERATEKIATTDPTAPGTGGTAVGMlstdSATQW 127
Cdd:PHA03247 2618 PPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGrvsrPRRARRLGRAAQASSPPQRPRRRAA----RPTVG 2693

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803  128 SLTSVETVQPASTEVETSQPAPMEAETSQPAPMEAETSQPAPMEAETSQPAPME-----ADTSQPAP-MEADTSKPAPTE 201
Cdd:PHA03247 2694 SLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGpatpgGPARPARPpTTAGPPAPAPPA 2773

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803  202 AETSKPAPTEAETSQPAPNEAETSKPAPTEAeTSKPAPTEAETTQLPRIQAVKTLF--TTSAATEVPSTEPTTMETasTE 279
Cdd:PHA03247 2774 APAAGPPRRLTRPAVASLSESRESLPSPWDP-ADPPAAVLAPAAALPPAASPAGPLppPTSAQPTAPPPPPGPPPP--SL 2850

                         250       260       270
                  ....*....|....*....|....*....|....*..
gi 159110803  280 SNESTIFLGPSVTHLPDSGLKKGLIVTPGNSPAPTLP 316
Cdd:PHA03247 2851 PLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLA 2887
PRK08691 PRK08691
DNA polymerase III subunits gamma and tau; Validated
 72-286 9.24e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236333 [Multi-domain]  Cd Length: 709  Bit Score: 38.15  E-value: 9.24e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803  72 AAHPELPTTVVMLERDSTSAGTSERATekiATTDPTAPGTGGTAVGMLSTDSATQWSlTSVETVQPASTEVETSQP---- 147
Cdd:PRK08691 363 AASCDANAVIENTELQSPSAQTAEKET---AAKKPQPRPEAETAQTPVQTASAAAMP-SEGKTAGPVSNQENNDVPpwed 438

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 148 APMEAETSQ-PAPMEAETSQPApmeAETSQPAPMEADTSQPAPMEADTS---KPAPTEAETSkPAPTEAETSQPAPNEAE 223
Cdd:PRK08691 439 APDEAQTAAgTAQTSAKSIQTA---SEAETPPENQVSKNKAADNETDAPlseVPSENPIQAT-PNDEAVETETFAHEAPA 514

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 159110803 224 TSKPAPTEAETSKPAPTEAETTQLPRIQAVKTlfTTSAATEVPSTEPTTMETASTESNESTIF 286
Cdd:PRK08691 515 EPFYGYGFPDNDCPPEDGAEIPPPDWEHAAPA--DTAGGGADEEAEAGGIGGNNTPSAPPPEF 575
PRK12727 PRK12727
flagellar biosynthesis protein FlhF;
131-284 9.24e-03

flagellar biosynthesis protein FlhF;


Pssm-ID: 237182 [Multi-domain]  Cd Length: 559  Bit Score: 38.05  E-value: 9.24e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 131 SVETVQPASTEVETSQPAPMEAETSQPAPMEAETSQPAPMEAETSQPAPMEADT-------SQPAPMEADTSKPAPTEAe 203
Cdd:PRK12727  54 ALETARSDTPATAAAPAPAPQAPTKPAAPVHAPLKLSANANMSQRQRVASAAEDmiaamalRQPVSVPRQAPAAAPVRA- 132

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 204 TSKPAPTeaeTSQPAPNEAETSKPAPTEAETSKPAPTEAETTQLPRIQAvktlfTTSAATEVPSTEPTTMETASTESNES 283
Cdd:PRK12727 133 ASIPSPA---AQALAHAAAVRTAPRQEHALSAVPEQLFADFLTTAPVPR-----APVQAPVVAAPAPVPAIAAALAAHAA 204


                 .
gi 159110803 284 T 284
Cdd:PRK12727 205 Y 205
NDFIP2 cd22306
NEDD4 family-interacting protein 2; The NEDD4 (neural precursor cell expressed, ...
 161-248 9.43e-03

NEDD4 family-interacting protein 2; The NEDD4 (neural precursor cell expressed, developmentally down-regulated protein 4)-family interacting proteins (NDFIPs) are adaptor proteins that recruit NEDD4 E3 ligases to specific substrate proteins, which leads to the ubiquitylation and subsequent degradation of these proteins. They also act as activators of the E3 ligase activity by releasing NEDD4 ligase from its auto-inhibitory conformation. NDFIP2 may play a role in protein trafficking.


Pssm-ID: 412070 [Multi-domain]  Cd Length: 229  Bit Score: 37.56  E-value: 9.43e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 161 EAETSQPAPMEAETSQPAPMEAdtSQPAPMEADTSKPAPTEAETSKPAPTEAETSQ-----PAPNEAETSKPAPTEAETS 235
Cdd:cd22306   10 EDDPSESSASEQPSTSTQVQES--SSNPAPETDAPPPPYSSITAGATAAPGTETQSefypvPPPYSVATSLPTYDEAEKA 87

                         90
                 ....*....|...
gi 159110803 236 KPAPTEAETTQLP 248
Cdd:cd22306   88 KAAAMAAAAAEVA 100
PRK12757 PRK12757
cell division protein FtsN; Provisional
 127-206 9.65e-03

cell division protein FtsN; Provisional


Pssm-ID: 237191 [Multi-domain]  Cd Length: 256  Bit Score: 37.71  E-value: 9.65e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 159110803 127 WSLTSVETVQPASTEVETSQPAPMEAETSQPAPMEAETSQPAPmeAETSQPAPMEADTSQPAPMEADTSKPAPTEAETSK 206
Cdd:PRK12757 107 YNEQTPQVPRSTVQIQQQAQQQQPPATTAQPQPVTPPRQTTAP--VQPQTPAPVRTQPAAPVTQAVEAPKVEAEKEKEQR 184
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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