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Conserved domains on  [gi|6754996|ref|NP_035176|]
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furin preproprotein [Mus musculus]

Protein Classification

Peptidases_S8_Protein_convertases_Kexins_Furin-lik and P_proprotein domain-containing protein( domain architecture ID 11243032)

protein containing domains S8_pro-domain, Peptidases_S8_Protein_convertases_Kexins_Furin-lik, P_proprotein, and FU

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Peptidases_S8_Protein_convertases_Kexins_Furin-lik cd04059
Peptidase S8 family domain in Protein convertases; Protein convertases, whose members include ...
113-402 5.65e-177

Peptidase S8 family domain in Protein convertases; Protein convertases, whose members include furins and kexins, are members of the peptidase S8 or Subtilase clan of proteases. They have an Asp/His/Ser catalytic triad that is not homologous to trypsin. Kexins are involved in the activation of peptide hormones, growth factors, and viral proteins. Furin cleaves cell surface vasoactive peptides and proteins involved in cardiovascular tissue remodeling in the TGN, at cell surface, or in endosomes but rarely in the ER. Furin also plays a key role in blood pressure regulation though the activation of transforming growth factor (TGF)-beta. High specificity is seen for cleavage after dibasic (Lys-Arg or Arg-Arg) or multiple basic residues in protein convertases. There is also strong sequence conservation.


:

Pssm-ID: 173789 [Multi-domain]  Cd Length: 297  Bit Score: 509.41  E-value: 5.65e-177
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  113 PTDPKFPQQWYLSGVTQR------DLNVKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPRY 186
Cdd:cd04059   1 PNDPLFPYQWYLKNTGQAggtpglDLNVTPAWEQGITGKGVTVAVVDDGLEITHPDLKDNYDPEASYDFNDNDPDPTPRY 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  187 TqmNDNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGVRMLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGP 266
Cdd:cd04059  81 D--DDNSHGTRCAGEIAAVGNNGICGVGVAPGAKLGGIRMLDGDVTDVVEAESLGLNPDYIDIYSNSWGPDDDGKTVDGP 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  267 ARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSGNQ 346
Cdd:cd04059 159 GPLAQRALENGVTNGRNGKGSIFVWAAGNGGNLGDNCNCDGYNNSIYTISVSAVTANGVRASYSEVGSSVLASAPSGGSG 238
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 6754996  347 N-EKQIVTTDLR--QKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSK 402
Cdd:cd04059 239 NpEASIVTTDLGgnCNCTSSHNGTSAAAPLAAGVIALMLEANPNLTWRDVQHILALTAR 297
S8_pro-domain pfam16470
Peptidase S8 pro-domain; This domain is the pro-domain of several peptidases belonging to ...
33-107 2.77e-37

Peptidase S8 pro-domain; This domain is the pro-domain of several peptidases belonging to family S8.


:

Pssm-ID: 465126  Cd Length: 77  Bit Score: 133.88  E-value: 2.77e-37
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 6754996     33 TWAVHIPGGPAVADRVAQKHGFHNLGQIFG--DYYHFWHRAVTKRSLSPHRPRHSRLQREPQVKWLEQQVAKRRAKR 107
Cdd:pfam16470   1 EWAVHLEGGPEEADRIAEKHGFINLGQIGGleDYYHFRHRRVSKRSKRSLRHKHSRLKKDPKVKWAEQQRGKKRVKR 77
P_proprotein pfam01483
Proprotein convertase P-domain; A unique feature of the eukaryotic subtilisin-like proprotein ...
484-570 4.12e-37

Proprotein convertase P-domain; A unique feature of the eukaryotic subtilisin-like proprotein convertases is the presence of an additional highly conserved sequence of approximately 150 residues (P domain) located immediately downstream of the catalytic domain.


:

Pssm-ID: 460225 [Multi-domain]  Cd Length: 86  Bit Score: 133.55  E-value: 4.12e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996    484 LEHVQARLTLSYNRRGDLAIHLISPMGTRSTLLAARPHDYSADGFNDWAFMTTHSWDEDPAGEWVLEIENTsEANNYGTL 563
Cdd:pfam01483   1 LEHVQVSVNITHTRRGDLRITLTSPSGTRSVLLNRRGGDTSSAGFLDWTFMSVHHWGERAEGTWTLEVTDT-APGDTGTL 79

                  ....*..
gi 6754996    564 TKFTLVL 570
Cdd:pfam01483  80 NSWQLTL 86
FU smart00261
Furin-like repeats;
638-675 7.49e-10

Furin-like repeats;


:

Pssm-ID: 214589 [Multi-domain]  Cd Length: 45  Bit Score: 54.82  E-value: 7.49e-10
                           10        20        30
                   ....*....|....*....|....*....|....*...
gi 6754996     638 ASVCTPCHASCATCQGPAPTDCLSCPSHASLDpvEQTC 675
Cdd:smart00261   1 DGECKPCHPECATCTGPGPDDCTSCKHGFFLD--GGKC 36
FU smart00261
Furin-like repeats;
581-619 1.46e-06

Furin-like repeats;


:

Pssm-ID: 214589 [Multi-domain]  Cd Length: 45  Bit Score: 45.58  E-value: 1.46e-06
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 6754996     581 PPESSGCKTLTSSQA--CVVCEEGYSLHQKSCVQHCPPGFI 619
Cdd:smart00261   5 KPCHPECATCTGPGPddCTSCKHGFFLDGGKCVSECPPGTY 45
 
Name Accession Description Interval E-value
Peptidases_S8_Protein_convertases_Kexins_Furin-lik cd04059
Peptidase S8 family domain in Protein convertases; Protein convertases, whose members include ...
113-402 5.65e-177

Peptidase S8 family domain in Protein convertases; Protein convertases, whose members include furins and kexins, are members of the peptidase S8 or Subtilase clan of proteases. They have an Asp/His/Ser catalytic triad that is not homologous to trypsin. Kexins are involved in the activation of peptide hormones, growth factors, and viral proteins. Furin cleaves cell surface vasoactive peptides and proteins involved in cardiovascular tissue remodeling in the TGN, at cell surface, or in endosomes but rarely in the ER. Furin also plays a key role in blood pressure regulation though the activation of transforming growth factor (TGF)-beta. High specificity is seen for cleavage after dibasic (Lys-Arg or Arg-Arg) or multiple basic residues in protein convertases. There is also strong sequence conservation.


Pssm-ID: 173789 [Multi-domain]  Cd Length: 297  Bit Score: 509.41  E-value: 5.65e-177
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  113 PTDPKFPQQWYLSGVTQR------DLNVKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPRY 186
Cdd:cd04059   1 PNDPLFPYQWYLKNTGQAggtpglDLNVTPAWEQGITGKGVTVAVVDDGLEITHPDLKDNYDPEASYDFNDNDPDPTPRY 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  187 TqmNDNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGVRMLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGP 266
Cdd:cd04059  81 D--DDNSHGTRCAGEIAAVGNNGICGVGVAPGAKLGGIRMLDGDVTDVVEAESLGLNPDYIDIYSNSWGPDDDGKTVDGP 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  267 ARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSGNQ 346
Cdd:cd04059 159 GPLAQRALENGVTNGRNGKGSIFVWAAGNGGNLGDNCNCDGYNNSIYTISVSAVTANGVRASYSEVGSSVLASAPSGGSG 238
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 6754996  347 N-EKQIVTTDLR--QKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSK 402
Cdd:cd04059 239 NpEASIVTTDLGgnCNCTSSHNGTSAAAPLAAGVIALMLEANPNLTWRDVQHILALTAR 297
Peptidase_S8 pfam00082
Subtilase family; Subtilases are a family of serine proteases. They appear to have ...
144-427 5.84e-63

Subtilase family; Subtilases are a family of serine proteases. They appear to have independently and convergently evolved an Asp/Ser/His catalytic triad, like that found in the trypsin serine proteases (see pfam00089). Structure is an alpha/beta fold containing a 7-stranded parallel beta sheet, order 2314567.


Pssm-ID: 395035 [Multi-domain]  Cd Length: 287  Bit Score: 212.70  E-value: 5.84e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996    144 GHGIVVSILDDGIEKNHPDLAGNYDPGASFD----VNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANNGVCGVGVAYNA 219
Cdd:pfam00082   1 GKGVVVAVLDTGIDPNHPDLSGNLDNDPSDDpeasVDFNNEWDDPRDDIDDKNGHGTHVAGIIAAGGNNSIGVSGVAPGA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996    220 RIGGVRML-DGEVTDAVEARSLGLN-PNHIHIYSASWGPEddgKTVDGPARLAEEAFFRGvsqGRGGLGSIFVWASGNGG 297
Cdd:pfam00082  81 KILGVRVFgDGGGTDAITAQAISWAiPQGADVINMSWGSD---KTDGGPGSWSAAVDQLG---GAEAAGSLFVWAAGNGS 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996    298 REHDSCNCDGY-TNSIYTLSISSATQF--GNVPWYSEACSS-------TLA----TTYSSGNQNEKQIVTTDLRQKCTES 363
Cdd:pfam00082 155 PGGNNGSSVGYpAQYKNVIAVGAVDEAseGNLASFSSYGPTldgrlkpDIVapggNITGGNISSTLLTTTSDPPNQGYDS 234
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 6754996    364 HTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTskpahlnaddwATNGVGRKVSHSYGYG 427
Cdd:pfam00082 235 MSGTSMATPHVAGAAALLKQAYPNLTPETLKALLVNT-----------ATDLGDAGLDRLFGYG 287
AprE COG1404
Serine protease, subtilisin family [Posttranslational modification, protein turnover, ...
81-440 1.58e-38

Serine protease, subtilisin family [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 441014 [Multi-domain]  Cd Length: 456  Bit Score: 149.48  E-value: 1.58e-38
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996   81 RPRHSRLQREPQVKWLEQQVAKRRAKRDVYQEPTDPKFPQQWYLSGVTQRDLNVKEAWAQGFTGHGIVVSILDDGIEKNH 160
Cdd:COG1404  45 AAALVAAAAAAAVAAALAAPLAPAALAAPAPLPVPAAAPAAVRAAQAALLAAAAAGSSAAGLTGAGVTVAVIDTGVDADH 124
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  161 PDLAGNYDPGASFDVNDQDPDpqprytqmNDNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGVRMLD--GEVTDAVEAR 238
Cdd:COG1404 125 PDLAGRVVGGYDFVDGDGDPS--------DDNGHGTHVAGIIAANGNNGGGVAGVAPGAKLLPVRVLDdnGSGTTSDIAA 196
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  239 slGLN---PNHIHIYSASWGPEDDGKTvDGPARLAEEAFFRGVsqgrgglgsIFVWASGNGGrehDSCNCDGYTNSIY-T 314
Cdd:COG1404 197 --AIDwaaDNGADVINLSLGGPADGYS-DALAAAVDYAVDKGV---------LVVAAAGNSG---SDDATVSYPAAYPnV 261
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  315 LSISSATQFGNVPWYSeacsstlattySSGNQNE-----KQIVTTDLRQKcTESHTGTSASAPLAAGIIALTLEANKNLT 389
Cdd:COG1404 262 IAVGAVDANGQLASFS-----------NYGPKVDvaapgVDILSTYPGGG-YATLSGTSMAAPHVAGAAALLLSANPDLT 329
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|.
gi 6754996  390 WRDMQHLVVQTSKPAHLNADDwatngvgrkvshsYGYGLLDAGAMVALAQN 440
Cdd:COG1404 330 PAQVRAILLNTATPLGAPGPY-------------YGYGLLADGAAGATSAG 367
S8_pro-domain pfam16470
Peptidase S8 pro-domain; This domain is the pro-domain of several peptidases belonging to ...
33-107 2.77e-37

Peptidase S8 pro-domain; This domain is the pro-domain of several peptidases belonging to family S8.


Pssm-ID: 465126  Cd Length: 77  Bit Score: 133.88  E-value: 2.77e-37
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 6754996     33 TWAVHIPGGPAVADRVAQKHGFHNLGQIFG--DYYHFWHRAVTKRSLSPHRPRHSRLQREPQVKWLEQQVAKRRAKR 107
Cdd:pfam16470   1 EWAVHLEGGPEEADRIAEKHGFINLGQIGGleDYYHFRHRRVSKRSKRSLRHKHSRLKKDPKVKWAEQQRGKKRVKR 77
P_proprotein pfam01483
Proprotein convertase P-domain; A unique feature of the eukaryotic subtilisin-like proprotein ...
484-570 4.12e-37

Proprotein convertase P-domain; A unique feature of the eukaryotic subtilisin-like proprotein convertases is the presence of an additional highly conserved sequence of approximately 150 residues (P domain) located immediately downstream of the catalytic domain.


Pssm-ID: 460225 [Multi-domain]  Cd Length: 86  Bit Score: 133.55  E-value: 4.12e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996    484 LEHVQARLTLSYNRRGDLAIHLISPMGTRSTLLAARPHDYSADGFNDWAFMTTHSWDEDPAGEWVLEIENTsEANNYGTL 563
Cdd:pfam01483   1 LEHVQVSVNITHTRRGDLRITLTSPSGTRSVLLNRRGGDTSSAGFLDWTFMSVHHWGERAEGTWTLEVTDT-APGDTGTL 79

                  ....*..
gi 6754996    564 TKFTLVL 570
Cdd:pfam01483  80 NSWQLTL 86
T7SS_mycosin TIGR03921
type VII secretion-associated serine protease mycosin; Members of this family are ...
132-436 2.18e-13

type VII secretion-associated serine protease mycosin; Members of this family are subtilisin-related serine proteases, found strictly in the Actinobacteria and associated with type VII secretion operons. The designation mycosin is used for members from Mycobacterium. [Protein fate, Protein and peptide secretion and trafficking, Protein fate, Protein modification and repair]


Pssm-ID: 274856 [Multi-domain]  Cd Length: 350  Bit Score: 72.36  E-value: 2.18e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996    132 LNVKEAWAQGfTGHGIVVSILDDGIEKnHPDLAGNYDPGASFdVNDQDpdpqprytQMND-NRHGTRCAGEVAAVANNGV 210
Cdd:TIGR03921   1 LSLEQAWKFS-TGAGVTVAVIDTGVDD-HPRLPGLVLPGGDF-VGSGD--------GTDDcDGHGTLVAGIIAGRPGEGD 69
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996    211 CGVGVAYNARIGGVRMLDGEVTDAVEARSLGlNPNH---------------IHIYSASWGPEDDGktVDGPARLA--EEA 273
Cdd:TIGR03921  70 GFSGVAPDARILPIRQTSAAFEPDEGTSGVG-DLGTlakairraadlgadvINISLVACLPAGSG--ADDPELGAavRYA 146
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996    274 FFRGVsqgrgglgsIFVWASGNGGrehDSCNCDgyTNSI-----YTLSISSATQFGNVPWYSEACSSTLATTYSSGnqne 348
Cdd:TIGR03921 147 LDKGV---------VVVAAAGNTG---GDGQKT--TVVYpawypGVLAVGSIDRDGTPSSFSLPGPWVDLAAPGEN---- 208
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996    349 kqIVTTDLRQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTskpahlnADDWATNGvgrkVSHSYGYGL 428
Cdd:TIGR03921 209 --IVSLSPGGDGLATTSGTSFAAPFVSGTAALVRSRFPDLTAAQVRRRIEAT-------ADHPARGG----RDDYVGYGV 275

                  ....*...
gi 6754996    429 LDAGAMVA 436
Cdd:TIGR03921 276 VDPVAALT 283
FU smart00261
Furin-like repeats;
638-675 7.49e-10

Furin-like repeats;


Pssm-ID: 214589 [Multi-domain]  Cd Length: 45  Bit Score: 54.82  E-value: 7.49e-10
                           10        20        30
                   ....*....|....*....|....*....|....*...
gi 6754996     638 ASVCTPCHASCATCQGPAPTDCLSCPSHASLDpvEQTC 675
Cdd:smart00261   1 DGECKPCHPECATCTGPGPDDCTSCKHGFFLD--GGKC 36
PTZ00262 PTZ00262
subtilisin-like protease; Provisional
149-412 6.11e-09

subtilisin-like protease; Provisional


Pssm-ID: 240338 [Multi-domain]  Cd Length: 639  Bit Score: 59.60  E-value: 6.11e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996   149 VSILDDGIEKNHPDLAGNYDP-----------------------GASFDVNDQDPdpqprytqMNDNRHGTRCAGEVAAV 205
Cdd:PTZ00262 320 ICVIDSGIDYNHPDLHDNIDVnvkelhgrkgidddnngnvddeyGANFVNNDGGP--------MDDNYHGTHVSGIISAI 391
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996   206 ANNGVCGVGVAYNARIGGVRMLD----GEVTDAVEARSLGLNPNhIHIYSASWGPEDDGKTVDGPARLAEEaffrgvsqg 281
Cdd:PTZ00262 392 GNNNIGIVGVDKRSKLIICKALDshklGRLGDMFKCFDYCISRE-AHMINGSFSFDEYSGIFNESVKYLEE--------- 461
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996   282 rggLGSIFVWASGNGGREHDSCN----CDGYTNSIY----------TLSISSATQFGNVPwYSEACSSTLATTYSSGNQN 347
Cdd:PTZ00262 462 ---KGILFVVSASNCSHTKESKPdipkCDLDVNKVYppilskklrnVITVSNLIKDKNNQ-YSLSPNSFYSAKYCQLAAP 537
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 6754996   348 EKQIVTTDLRQKCTEShTGTSASAPLAAGIIALTLEANKNLTWRD----MQHLVVQTskPAHLNADDWA 412
Cdd:PTZ00262 538 GTNIYSTFPKNSYRKL-NGTSMAAPHVAAIASLILSINPSLSYEEviriLKESIVQL--PSLKNKVKWG 603
FU cd00064
Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is ...
643-675 2.67e-07

Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is a serine-kinase dependent proprotein processor. Other members of this family include endoproteases and cell surface receptors.


Pssm-ID: 238021 [Multi-domain]  Cd Length: 49  Bit Score: 47.90  E-value: 2.67e-07
                        10        20        30
                ....*....|....*....|....*....|...
gi 6754996  643 PCHASCATCQGPAPTDCLSCPSHASLDpvEQTC 675
Cdd:cd00064   1 PCHPSCATCTGPGPDQCTSCRHGFYLD--GGTC 31
FU smart00261
Furin-like repeats;
581-619 1.46e-06

Furin-like repeats;


Pssm-ID: 214589 [Multi-domain]  Cd Length: 45  Bit Score: 45.58  E-value: 1.46e-06
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 6754996     581 PPESSGCKTLTSSQA--CVVCEEGYSLHQKSCVQHCPPGFI 619
Cdd:smart00261   5 KPCHPECATCTGPGPddCTSCKHGFFLDGGKCVSECPPGTY 45
FU cd00064
Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is ...
584-621 1.28e-05

Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is a serine-kinase dependent proprotein processor. Other members of this family include endoproteases and cell surface receptors.


Pssm-ID: 238021 [Multi-domain]  Cd Length: 49  Bit Score: 42.89  E-value: 1.28e-05
                        10        20        30        40
                ....*....|....*....|....*....|....*....|
gi 6754996  584 SSGCKTLTSS--QACVVCEEGYSLHQKSCVQHCPPGFIPQ 621
Cdd:cd00064   3 HPSCATCTGPgpDQCTSCRHGFYLDGGTCVSECPEGTYAD 42
Furin-like_2 pfam15913
Furin-like repeat, cysteine-rich; The furin-like cysteine rich region has been found in a ...
584-621 1.45e-03

Furin-like repeat, cysteine-rich; The furin-like cysteine rich region has been found in a variety of proteins from eukaryotes that are involved in the mechanism of signal transduction by receptor tyrosine kinases, which involves receptor aggregation.


Pssm-ID: 464939 [Multi-domain]  Cd Length: 102  Bit Score: 38.95  E-value: 1.45e-03
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 6754996    584 SSGCKTLTSSQACVVCEEGYSLHQKSCVQHCPPGFIPQ 621
Cdd:pfam15913  59 AENCESCFSKDFCTKCKEGFYLHKGKCLDTCPEGTAAQ 96
 
Name Accession Description Interval E-value
Peptidases_S8_Protein_convertases_Kexins_Furin-lik cd04059
Peptidase S8 family domain in Protein convertases; Protein convertases, whose members include ...
113-402 5.65e-177

Peptidase S8 family domain in Protein convertases; Protein convertases, whose members include furins and kexins, are members of the peptidase S8 or Subtilase clan of proteases. They have an Asp/His/Ser catalytic triad that is not homologous to trypsin. Kexins are involved in the activation of peptide hormones, growth factors, and viral proteins. Furin cleaves cell surface vasoactive peptides and proteins involved in cardiovascular tissue remodeling in the TGN, at cell surface, or in endosomes but rarely in the ER. Furin also plays a key role in blood pressure regulation though the activation of transforming growth factor (TGF)-beta. High specificity is seen for cleavage after dibasic (Lys-Arg or Arg-Arg) or multiple basic residues in protein convertases. There is also strong sequence conservation.


Pssm-ID: 173789 [Multi-domain]  Cd Length: 297  Bit Score: 509.41  E-value: 5.65e-177
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  113 PTDPKFPQQWYLSGVTQR------DLNVKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPRY 186
Cdd:cd04059   1 PNDPLFPYQWYLKNTGQAggtpglDLNVTPAWEQGITGKGVTVAVVDDGLEITHPDLKDNYDPEASYDFNDNDPDPTPRY 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  187 TqmNDNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGVRMLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGP 266
Cdd:cd04059  81 D--DDNSHGTRCAGEIAAVGNNGICGVGVAPGAKLGGIRMLDGDVTDVVEAESLGLNPDYIDIYSNSWGPDDDGKTVDGP 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  267 ARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSGNQ 346
Cdd:cd04059 159 GPLAQRALENGVTNGRNGKGSIFVWAAGNGGNLGDNCNCDGYNNSIYTISVSAVTANGVRASYSEVGSSVLASAPSGGSG 238
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 6754996  347 N-EKQIVTTDLR--QKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSK 402
Cdd:cd04059 239 NpEASIVTTDLGgnCNCTSSHNGTSAAAPLAAGVIALMLEANPNLTWRDVQHILALTAR 297
Peptidase_S8 pfam00082
Subtilase family; Subtilases are a family of serine proteases. They appear to have ...
144-427 5.84e-63

Subtilase family; Subtilases are a family of serine proteases. They appear to have independently and convergently evolved an Asp/Ser/His catalytic triad, like that found in the trypsin serine proteases (see pfam00089). Structure is an alpha/beta fold containing a 7-stranded parallel beta sheet, order 2314567.


Pssm-ID: 395035 [Multi-domain]  Cd Length: 287  Bit Score: 212.70  E-value: 5.84e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996    144 GHGIVVSILDDGIEKNHPDLAGNYDPGASFD----VNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANNGVCGVGVAYNA 219
Cdd:pfam00082   1 GKGVVVAVLDTGIDPNHPDLSGNLDNDPSDDpeasVDFNNEWDDPRDDIDDKNGHGTHVAGIIAAGGNNSIGVSGVAPGA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996    220 RIGGVRML-DGEVTDAVEARSLGLN-PNHIHIYSASWGPEddgKTVDGPARLAEEAFFRGvsqGRGGLGSIFVWASGNGG 297
Cdd:pfam00082  81 KILGVRVFgDGGGTDAITAQAISWAiPQGADVINMSWGSD---KTDGGPGSWSAAVDQLG---GAEAAGSLFVWAAGNGS 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996    298 REHDSCNCDGY-TNSIYTLSISSATQF--GNVPWYSEACSS-------TLA----TTYSSGNQNEKQIVTTDLRQKCTES 363
Cdd:pfam00082 155 PGGNNGSSVGYpAQYKNVIAVGAVDEAseGNLASFSSYGPTldgrlkpDIVapggNITGGNISSTLLTTTSDPPNQGYDS 234
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 6754996    364 HTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTskpahlnaddwATNGVGRKVSHSYGYG 427
Cdd:pfam00082 235 MSGTSMATPHVAGAAALLKQAYPNLTPETLKALLVNT-----------ATDLGDAGLDRLFGYG 287
AprE COG1404
Serine protease, subtilisin family [Posttranslational modification, protein turnover, ...
81-440 1.58e-38

Serine protease, subtilisin family [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 441014 [Multi-domain]  Cd Length: 456  Bit Score: 149.48  E-value: 1.58e-38
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996   81 RPRHSRLQREPQVKWLEQQVAKRRAKRDVYQEPTDPKFPQQWYLSGVTQRDLNVKEAWAQGFTGHGIVVSILDDGIEKNH 160
Cdd:COG1404  45 AAALVAAAAAAAVAAALAAPLAPAALAAPAPLPVPAAAPAAVRAAQAALLAAAAAGSSAAGLTGAGVTVAVIDTGVDADH 124
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  161 PDLAGNYDPGASFDVNDQDPDpqprytqmNDNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGVRMLD--GEVTDAVEAR 238
Cdd:COG1404 125 PDLAGRVVGGYDFVDGDGDPS--------DDNGHGTHVAGIIAANGNNGGGVAGVAPGAKLLPVRVLDdnGSGTTSDIAA 196
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  239 slGLN---PNHIHIYSASWGPEDDGKTvDGPARLAEEAFFRGVsqgrgglgsIFVWASGNGGrehDSCNCDGYTNSIY-T 314
Cdd:COG1404 197 --AIDwaaDNGADVINLSLGGPADGYS-DALAAAVDYAVDKGV---------LVVAAAGNSG---SDDATVSYPAAYPnV 261
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  315 LSISSATQFGNVPWYSeacsstlattySSGNQNE-----KQIVTTDLRQKcTESHTGTSASAPLAAGIIALTLEANKNLT 389
Cdd:COG1404 262 IAVGAVDANGQLASFS-----------NYGPKVDvaapgVDILSTYPGGG-YATLSGTSMAAPHVAGAAALLLSANPDLT 329
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|.
gi 6754996  390 WRDMQHLVVQTSKPAHLNADDwatngvgrkvshsYGYGLLDAGAMVALAQN 440
Cdd:COG1404 330 PAQVRAILLNTATPLGAPGPY-------------YGYGLLADGAAGATSAG 367
S8_pro-domain pfam16470
Peptidase S8 pro-domain; This domain is the pro-domain of several peptidases belonging to ...
33-107 2.77e-37

Peptidase S8 pro-domain; This domain is the pro-domain of several peptidases belonging to family S8.


Pssm-ID: 465126  Cd Length: 77  Bit Score: 133.88  E-value: 2.77e-37
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 6754996     33 TWAVHIPGGPAVADRVAQKHGFHNLGQIFG--DYYHFWHRAVTKRSLSPHRPRHSRLQREPQVKWLEQQVAKRRAKR 107
Cdd:pfam16470   1 EWAVHLEGGPEEADRIAEKHGFINLGQIGGleDYYHFRHRRVSKRSKRSLRHKHSRLKKDPKVKWAEQQRGKKRVKR 77
P_proprotein pfam01483
Proprotein convertase P-domain; A unique feature of the eukaryotic subtilisin-like proprotein ...
484-570 4.12e-37

Proprotein convertase P-domain; A unique feature of the eukaryotic subtilisin-like proprotein convertases is the presence of an additional highly conserved sequence of approximately 150 residues (P domain) located immediately downstream of the catalytic domain.


Pssm-ID: 460225 [Multi-domain]  Cd Length: 86  Bit Score: 133.55  E-value: 4.12e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996    484 LEHVQARLTLSYNRRGDLAIHLISPMGTRSTLLAARPHDYSADGFNDWAFMTTHSWDEDPAGEWVLEIENTsEANNYGTL 563
Cdd:pfam01483   1 LEHVQVSVNITHTRRGDLRITLTSPSGTRSVLLNRRGGDTSSAGFLDWTFMSVHHWGERAEGTWTLEVTDT-APGDTGTL 79

                  ....*..
gi 6754996    564 TKFTLVL 570
Cdd:pfam01483  80 NSWQLTL 86
Peptidases_S8_15 cd07498
Peptidase S8 family domain, uncharacterized subfamily 15; This family is a member of the ...
147-400 1.51e-36

Peptidase S8 family domain, uncharacterized subfamily 15; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173822 [Multi-domain]  Cd Length: 242  Bit Score: 137.86  E-value: 1.51e-36
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  147 IVVSILDDGIEKNHPDLAG--NYDPGasFDVNDQDPDPQPRYTqmndnrHGTRCAGEVAAVANNGVCGVGVAYNARIGGV 224
Cdd:cd07498   1 VVVAIIDTGVDLNHPDLSGkpKLVPG--WNFVSNNDPTSDIDG------HGTACAGVAAAVGNNGLGVAGVAPGAKLMPV 72
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  225 RMLDGEVTDAVEARSLGLN---PNHIHIYSASWGPEDdgktvdgPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHD 301
Cdd:cd07498  73 RIADSLGYAYWSDIAQAITwaaDNGADVISNSWGGSD-------STESISSAIDNAATYGRNGKGGVVLFAAGNSGRSVS 145
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  302 ScncdGYTNSIYTLSISSATQFGNVPWYSE--------ACSSTLATTySSGNQNEKQIVTTDlrqkcTESHTGTSASAPL 373
Cdd:cd07498 146 S----GYAANPSVIAVAATDSNDARASYSNygnyvdlvAPGVGIWTT-GTGRGSAGDYPGGG-----YGSFSGTSFASPV 215
                       250       260
                ....*....|....*....|....*..
gi 6754996  374 AAGIIALTLEANKNLTWRDMQHLVVQT 400
Cdd:cd07498 216 AAGVAALILSANPNLTPAEVEDILTST 242
Peptidases_S8_Subtilisin_like cd07473
Peptidase S8 family domain in Subtilisin-like proteins; This family is a member of the ...
146-402 6.04e-28

Peptidase S8 family domain in Subtilisin-like proteins; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173799 [Multi-domain]  Cd Length: 259  Bit Score: 113.44  E-value: 6.04e-28
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  146 GIVVSILDDGIEKNHPDLAGN------YDPGASFDvNDQ---------------DPDPqprytqMNDNRHGTRCAGEVAA 204
Cdd:cd07473   3 DVVVAVIDTGVDYNHPDLKDNmwvnpgEIPGNGID-DDGngyvddiygwnfvnnDNDP------MDDNGHGTHVAGIIGA 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  205 VANNGVCGVGVAYNARIGGVRMLD----GEVTDAVE----ARSLGlnpnhIHIYSASWGPeddgktvDGPARLAEEAFFR 276
Cdd:cd07473  76 VGNNGIGIAGVAWNVKIMPLKFLGadgsGTTSDAIKaidyAVDMG-----AKIINNSWGG-------GGPSQALRDAIAR 143
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  277 GVSQgrgglGSIFVWASGNGGREHDSCNC--DGYTNSiYTLSISSATQFGNVPWYSEACSST--LA-------TTYSSGN 345
Cdd:cd07473 144 AIDA-----GILFVAAAGNDGTNNDKTPTypASYDLD-NIISVAATDSNDALASFSNYGKKTvdLAapgvdilSTSPGGG 217
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 6754996  346 QNEKqivttdlrqkcteshTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSK 402
Cdd:cd07473 218 YGYM---------------SGTSMATPHVAGAAALLLSLNPNLTAAQIKDAILSSAD 259
Peptidases_S8_S53 cd00306
Peptidase domain in the S8 and S53 families; Members of the peptidases S8 (subtilisin and ...
147-400 1.94e-27

Peptidase domain in the S8 and S53 families; Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) family include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53, it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium; some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values.


Pssm-ID: 173787 [Multi-domain]  Cd Length: 241  Bit Score: 111.52  E-value: 1.94e-27
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  147 IVVSILDDGIEKNHPDLAGNYDPGASFdvNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANNGVcGVGVAYNARIGGVRM 226
Cdd:cd00306   1 VTVAVIDTGVDPDHPDLDGLFGGGDGG--NDDDDNENGPTDPDDGNGHGTHVAGIIAASANNGG-GVGVAPGAKLIPVKV 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  227 LDGEVTDAVEARSLGLN----PNHIHIYSASWGPEDDGKTvDGPARLAEEAFFRgvsqgrggLGSIFVWASGNGGREHDS 302
Cdd:cd00306  78 LDGDGSGSSSDIAAAIDyaaaDQGADVINLSLGGPGSPPS-SALSEAIDYALAK--------LGVLVVAAAGNDGPDGGT 148
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  303 cNCDGYTNSIYTLSISSATQFGNVPWYSeACSSTLATTYSSGNQnekQIVTTDLRQKCTESHTGTSASAPLAAGIIALTL 382
Cdd:cd00306 149 -NIGYPAASPNVIAVGAVDRDGTPASPS-SNGGAGVDIAAPGGD---ILSSPTTGGGGYATLSGTSMAAPIVAGVAALLL 223
                       250
                ....*....|....*...
gi 6754996  383 EANKNLTWRDMQHLVVQT 400
Cdd:cd00306 224 SANPDLTPAQVKAALLST 241
Peptidases_S8_Thermitase_like cd07484
Peptidase S8 family domain in Thermitase-like proteins; Thermitase is a non-specific, ...
112-380 7.98e-25

Peptidase S8 family domain in Thermitase-like proteins; Thermitase is a non-specific, trypsin-related serine protease with a very high specific activity. It contains a subtilisin like domain. The tertiary structure of thermitase is similar to that of subtilisin BPN'. It contains a Asp/His/Ser catalytic triad. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) clan include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53 the it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values.


Pssm-ID: 173810 [Multi-domain]  Cd Length: 260  Bit Score: 104.65  E-value: 7.98e-25
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  112 EPTDPKFPQQWYLsgvtqRDLNVKEAWAQGfTGHGIVVSILDDGIEKNHPDLA-GNYDPGASFDVNDQDPdpqprytqMN 190
Cdd:cd07484   1 TPNDPYYSYQWNL-----DQIGAPKAWDIT-GGSGVTVAVVDTGVDPTHPDLLkVKFVLGYDFVDNDSDA--------MD 66
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  191 DNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGVRMLD--GEVTDAVEARSLglnpnhihIYSAswgpeDDGKTV----- 263
Cdd:cd07484  67 DNGHGTHVAGIIAAATNNGTGVAGVAPKAKIMPVKVLDanGSGSLADIANGI--------RYAA-----DKGAKVinlsl 133
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  264 --DGPARLAEEAFFRGVSQgrgglGSIFVWASGNGGREHDScncdgYTNSI-YTLSISSATQFGNVPWYSEAcSSTLATT 340
Cdd:cd07484 134 ggGLGSTALQEAINYAWNK-----GVVVVAAAGNEGVSSVS-----YPAAYpGAIAVAATDQDDKRASFSNY-GKWVDVS 202
                       250       260       270       280
                ....*....|....*....|....*....|....*....|
gi 6754996  341 YSSGNqnekqIVTTDLRQKcTESHTGTSASAPLAAGIIAL 380
Cdd:cd07484 203 APGGG-----ILSTTPDGD-YAYMSGTSMATPHVAGVAAL 236
Peptidases_S8_Subtilisin_subset cd07477
Peptidase S8 family domain in Subtilisin proteins; This group is composed of many different ...
146-389 4.75e-21

Peptidase S8 family domain in Subtilisin proteins; This group is composed of many different subtilisins: Pro-TK-subtilisin, subtilisin Carlsberg, serine protease Pb92 subtilisin, and BPN subtilisins just to name a few. Pro-TK-subtilisin is a serine protease from the hyperthermophilic archaeon Thermococcus kodakaraensis and consists of a signal peptide, a propeptide, and a mature domain. TK-subtilisin is matured from pro-TK-subtilisin upon autoprocessing and degradation of the propeptide. Unlike other subtilisins though, the folding of the unprocessed form of pro-TK-subtilisin is induced by Ca2+ binding which is almost completed prior to autoprocessing. Ca2+ is required for activity unlike the bacterial subtilisins. The propeptide is not required for folding of the mature domain unlike the bacterial subtilases because of the stability produced from Ca2+ binding. Subtilisin Carlsberg is extremely similar in structure to subtilisin BPN'/Novo thought it has a 30% difference in amino acid sequence. The substrate binding regions are also similar and 2 possible Ca2+ binding sites have been identified recently. Subtilisin Carlsberg possesses the highest commercial importance as a proteolytic additive for detergents. Serine protease Pb92, the serine protease from the alkalophilic Bacillus strain PB92, also contains two calcium ions and the overall folding of the polypeptide chain closely resembles that of the subtilisins. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The S53 family contains a catalytic triad Glu/Asp/Ser. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173803 [Multi-domain]  Cd Length: 229  Bit Score: 92.59  E-value: 4.75e-21
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  146 GIVVSILDDGIEKNHPDLAGNYDPGASFdVNDQDPDPQprytqmNDNRHGTRCAGEVAAvANNGVCGVGVAYNARIGGVR 225
Cdd:cd07477   1 GVKVAVIDTGIDSSHPDLKLNIVGGANF-TGDDNNDYQ------DGNGHGTHVAGIIAA-LDNGVGVVGVAPEADLYAVK 72
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  226 MLD----GEVTDAVEARSLGLNpNHIHIYSASWGPEDDGKTVdgparlaEEAFFRGVSQGrgglgsIF-VWASGNggreh 300
Cdd:cd07477  73 VLNddgsGTYSDIIAGIEWAIE-NGMDIINMSLGGPSDSPAL-------REAIKKAYAAG------ILvVAAAGN----- 133
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  301 dscncDGYTNSIYT--------LSISSATQFGNVPWYSeacsstlattySSGNQNE-----KQIVTTDLRQKcTESHTGT 367
Cdd:cd07477 134 -----SGNGDSSYDypakypsvIAVGAVDSNNNRASFS-----------STGPEVElaapgVDILSTYPNND-YAYLSGT 196
                       250       260
                ....*....|....*....|..
gi 6754996  368 SASAPLAAGIIALTLEANKNLT 389
Cdd:cd07477 197 SMATPHVAGVAALVWSKRPELT 218
Peptidases_S8_Fervidolysin_like cd07485
Peptidase S8 family domain in Fervidolysin; Fervidolysin found in Fervidobacterium pennivorans ...
136-387 1.10e-20

Peptidase S8 family domain in Fervidolysin; Fervidolysin found in Fervidobacterium pennivorans is an extracellular subtilisin-like keratinase. It is contains a signal peptide, a propeptide, and a catalytic region. The tertiary structure of fervidolysin is similar to that of subtilisin. It contains a Asp/His/Ser catalytic triad and is a member of the peptidase S8 (subtilisin and kexin) family. The catalytic triad is similar to that found in trypsin-like proteases, but it does not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53, it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium; some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values.


Pssm-ID: 173811 [Multi-domain]  Cd Length: 273  Bit Score: 92.93  E-value: 1.10e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  136 EAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYD-PGASFDVNDQDPDPQ---PRYTQMNDNRHGTRCAGEVAAVANN--G 209
Cdd:cd07485   1 AAWEFGTGGPGIIVAVVDTGVDGTHPDLQGNGDgDGYDPAVNGYNFVPNvgdIDNDVSVGGGHGTHVAGTIAAVNNNggG 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  210 VCGV----GVAYNARIGGVRMLDGE--VTDAVEARSLGL-NPNHIHIYSASWGpeddGKTVDGPARLAEEAFFRGVSQGR 282
Cdd:cd07485  81 VGGIagagGVAPGVKIMSIQIFAGRyyVGDDAVAAAIVYaADNGAVILQNSWG----GTGGGIYSPLLKDAFDYFIENAG 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  283 GGL--GSIFVWASGNggrEHDSCncdGYTNSIYTLSISSATQFGNvpwYSEACSSTLATTYSSGNQNEKQIVTTDLRQKC 360
Cdd:cd07485 157 GSPldGGIVVFSAGN---SYTDE---HRFPAAYPGVIAVAALDTN---DNKASFSNYGRWVDIAAPGVGTILSTVPKLDG 227
                       250       260       270
                ....*....|....*....|....*....|..
gi 6754996  361 TESHT-----GTSASAPLAAGIIALTLEANKN 387
Cdd:cd07485 228 DGGGNyeylsGTSMAAPHVSGVAALVLSKFPD 259
Peptidases_S8_Autotransporter_serine_protease_like cd04848
Peptidase S8 family domain in Autotransporter serine proteases; Autotransporter serine ...
143-400 2.90e-20

Peptidase S8 family domain in Autotransporter serine proteases; Autotransporter serine proteases belong to Peptidase S8 or Subtilase family. Subtilases, or subtilisin-like serine proteases, have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution). Autotransporters are a superfamily of outer membrane/secreted proteins of gram-negative bacteria. The presence of these subtilisin-like domains in these autotransporters are may enable them to be auto-catalytic and may also serve to allow them to act as a maturation protease cleaving other outer membrane proteins at the cell surface.


Pssm-ID: 173794 [Multi-domain]  Cd Length: 267  Bit Score: 91.23  E-value: 2.90e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  143 TGHGIVVSILDDGIEKNHPDLAGNYDP-GASFDVNDQDPDPQPRYtqmndNRHGTRCAGeVAAVANNGVCGVGVAYNARI 221
Cdd:cd04848   1 TGAGVKVGVIDSGIDLSHPEFAGRVSEaSYYVAVNDAGYASNGDG-----DSHGTHVAG-VIAAARDGGGMHGVAPDATL 74
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  222 GGVRMLDG---EVTDAVEARSL-GLNPNHIHIYSASWGPEDDGKTVDGPARL--------AEEAFFRGVSQgrgglGSIF 289
Cdd:cd04848  75 YSARASASagsTFSDADIAAAYdFLAASGVRIINNSWGGNPAIDTVSTTYKGsaatqgntLLAALARAANA-----GGLF 149
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  290 VWASGNGGREHDSCNCDGYT-------NSIytLSISSATQFGNVP--WYSEAC----SSTLA-------TTYSSGNQNEK 349
Cdd:cd04848 150 VFAAGNDGQANPSLAAAALPylepeleGGW--IAVVAVDPNGTIAsySYSNRCgvaaNWCLAapgeniySTDPDGGNGYG 227
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|.
gi 6754996  350 QIvttdlrqkcteshTGTSASAPLAAGIIALTLEANKNLTwrdmQHLVVQT 400
Cdd:cd04848 228 RV-------------SGTSFAAPHVSGAAALLAQKFPWLT----ADQVRQT 261
Peptidases_S8_subtilisin_Vpr-like cd07474
Peptidase S8 family domain in Vpr-like proteins; The maturation of the peptide antibiotic ...
144-410 4.88e-20

Peptidase S8 family domain in Vpr-like proteins; The maturation of the peptide antibiotic (lantibiotic) subtilin in Bacillus subtilis ATCC 6633 includes posttranslational modifications of the propeptide and proteolytic cleavage of the leader peptide. Vpr was identified as one of the proteases, along with WprA, that are capable of processing subtilin. Asp, Ser, His triadPeptidases S8 or Subtilases are a serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173800 [Multi-domain]  Cd Length: 295  Bit Score: 91.24  E-value: 4.88e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  144 GHGIVVSILDDGIEKNHPDLAG------NYDPGASFDVNDQDPDPQPRYTQMNDNR-------HGTRCAGEVAAVANNGV 210
Cdd:cd07474   1 GKGVKVAVIDTGIDYTHPDLGGpgfpndKVKGGYDFVDDDYDPMDTRPYPSPLGDAsagdatgHGTHVAGIIAGNGVNVG 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  211 CGVGVAYNARIGGVRMLD--GEVTDAVEARSL--GLNPnHIHIYSASWGPEDDGKtvDGPARLAEEAFFRgvsqgrggLG 286
Cdd:cd07474  81 TIKGVAPKADLYAYKVLGpgGSGTTDVIIAAIeqAVDD-GMDVINLSLGSSVNGP--DDPDAIAINNAVK--------AG 149
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  287 SIFVWASGNGGrehDSCNCDGyTNSIYTLSISSATQFGNVPWYSEacssTLATTYSSGNQNEKQIVTTDL---------- 356
Cdd:cd07474 150 VVVVAAAGNSG---PAPYTIG-SPATAPSAITVGASTVADVAEAD----TVGPSSSRGPPTSDSAIKPDIvapgvdimst 221
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 6754996  357 ---RQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNADD 410
Cdd:cd07474 222 apgSGTGYARMSGTSMAAPHVAGAAALLKQAHPDWSPAQIKAALMNTAKPLYDSDGV 278
Peptidases_S8_13 cd07496
Peptidase S8 family domain, uncharacterized subfamily 13; This family is a member of the ...
146-389 2.63e-18

Peptidase S8 family domain, uncharacterized subfamily 13; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173820 [Multi-domain]  Cd Length: 285  Bit Score: 86.19  E-value: 2.63e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  146 GIVVSILDDGIEKNHPDLAGNYDPGASF----------DVNDQDP-DPQPRYTQMNDNR-------------HGTRCAGE 201
Cdd:cd07496   1 GVVVAVLDTGVLFHHPDLAGVLLPGYDFisdpaiandgDGRDSDPtDPGDWVTGDDVPPggfcgsgvspsswHGTHVAGT 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  202 VAAVANNGVcGV-GVAYNARIGGVRML---DGEVTDAVEArslglnpnhihIYSASWGPEDDGKTVDGPAR-----LAEE 272
Cdd:cd07496  81 IAAVTNNGV-GVaGVAWGARILPVRVLgkcGGTLSDIVDG-----------MRWAAGLPVPGVPVNPNPAKvinlsLGGD 148
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  273 AFFRGVSQ----GRGGLGSIFVWASGNGGR--EHDS-CNCDGytnsiyTLSISSATQFGNVPWYSEACSST-LAT----T 340
Cdd:cd07496 149 GACSATMQnainDVRARGVLVVVAAGNEGSsaSVDApANCRG------VIAVGATDLRGQRASYSNYGPAVdVSApggdC 222
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|..
gi 6754996  341 YSSGNQNEKQIVTTDLRQKCTESHT---GTSASAPLAAGIIALTLEANKNLT 389
Cdd:cd07496 223 ASDVNGDGYPDSNTGTTSPGGSTYGflqGTSMAAPHVAGVAALMKSVNPSLT 274
Peptidases_S8_5 cd07489
Peptidase S8 family domain, uncharacterized subfamily 5; gap in seq This family is a member of ...
134-403 2.44e-14

Peptidase S8 family domain, uncharacterized subfamily 5; gap in seq This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173814 [Multi-domain]  Cd Length: 312  Bit Score: 74.56  E-value: 2.44e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  134 VKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYDPGASF--------DVNDQDPDPQPRYTQMNDNRHGTRCAGEVAav 205
Cdd:cd07489   2 VDKLHAEGITGKGVKVAVVDTGIDYTHPALGGCFGPGCKVaggydfvgDDYDGTNPPVPDDDPMDCQGHGTHVAGIIA-- 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  206 ANNGVCG-VGVAYNARIGGVRMLD--GEVTDAVEARSL------GlnpnhIHIYSASWGpeDDGKTVDGPA-----RLAE 271
Cdd:cd07489  80 ANPNAYGfTGVAPEATLGAYRVFGcsGSTTEDTIIAAFlrayedG-----ADVITASLG--GPSGWSEDPWavvasRIVD 152
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  272 EAFFRGVSQG-RGGLGSifvWASGNGGrehdscncdgytNSIYTLSISSAtqfgnvpwyseacsstlATTYSS-GNQNEK 349
Cdd:cd07489 153 AGVVVTIAAGnDGERGP---FYASSPA------------SGRGVIAVASV-----------------DSYFSSwGPTNEL 200
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 6754996  350 Q-----------IVTTDLRQKCT-ESHTGTSASAPLAAGIIALTLEA-NKNLTWRDMQHLVVQTSKP 403
Cdd:cd07489 201 YlkpdvaapggnILSTYPLAGGGyAVLSGTSMATPYVAGAAALLIQArHGKLSPAELRDLLASTAKP 267
T7SS_mycosin TIGR03921
type VII secretion-associated serine protease mycosin; Members of this family are ...
132-436 2.18e-13

type VII secretion-associated serine protease mycosin; Members of this family are subtilisin-related serine proteases, found strictly in the Actinobacteria and associated with type VII secretion operons. The designation mycosin is used for members from Mycobacterium. [Protein fate, Protein and peptide secretion and trafficking, Protein fate, Protein modification and repair]


Pssm-ID: 274856 [Multi-domain]  Cd Length: 350  Bit Score: 72.36  E-value: 2.18e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996    132 LNVKEAWAQGfTGHGIVVSILDDGIEKnHPDLAGNYDPGASFdVNDQDpdpqprytQMND-NRHGTRCAGEVAAVANNGV 210
Cdd:TIGR03921   1 LSLEQAWKFS-TGAGVTVAVIDTGVDD-HPRLPGLVLPGGDF-VGSGD--------GTDDcDGHGTLVAGIIAGRPGEGD 69
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996    211 CGVGVAYNARIGGVRMLDGEVTDAVEARSLGlNPNH---------------IHIYSASWGPEDDGktVDGPARLA--EEA 273
Cdd:TIGR03921  70 GFSGVAPDARILPIRQTSAAFEPDEGTSGVG-DLGTlakairraadlgadvINISLVACLPAGSG--ADDPELGAavRYA 146
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996    274 FFRGVsqgrgglgsIFVWASGNGGrehDSCNCDgyTNSI-----YTLSISSATQFGNVPWYSEACSSTLATTYSSGnqne 348
Cdd:TIGR03921 147 LDKGV---------VVVAAAGNTG---GDGQKT--TVVYpawypGVLAVGSIDRDGTPSSFSLPGPWVDLAAPGEN---- 208
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996    349 kqIVTTDLRQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTskpahlnADDWATNGvgrkVSHSYGYGL 428
Cdd:TIGR03921 209 --IVSLSPGGDGLATTSGTSFAAPFVSGTAALVRSRFPDLTAAQVRRRIEAT-------ADHPARGG----RDDYVGYGV 275

                  ....*...
gi 6754996    429 LDAGAMVA 436
Cdd:TIGR03921 276 VDPVAALT 283
Peptidases_S8_1 cd07487
Peptidase S8 family domain, uncharacterized subfamily 1; This family is a member of the ...
144-389 2.31e-13

Peptidase S8 family domain, uncharacterized subfamily 1; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173812 [Multi-domain]  Cd Length: 264  Bit Score: 71.08  E-value: 2.31e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  144 GHGIVVSILDDGIEKNHPDLAGNYDPGASFdVNDQDPDPQPRytqmNDNRHGTRCAGEVAA--VANNGVcGVGVAYNARI 221
Cdd:cd07487   1 GKGITVAVLDTGIDAPHPDFDGRIIRFADF-VNTVNGRTTPY----DDNGHGTHVAGIIAGsgRASNGK-YKGVAPGANL 74
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  222 GGVRMLD----GEVTDAVEA----RSLGlNPNHIHIYSASWGPEDDGKTVDGPARLA-EEAFFRGVsqgrgglgsIFVWA 292
Cdd:cd07487  75 VGVKVLDdsgsGSESDIIAGidwvVENN-EKYNIRVVNLSLGAPPDPSYGEDPLCQAvERLWDAGI---------VVVVA 144
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  293 SGNGGREHDSCNCDGytNSIYTLSISSATQFGNVPWYSEACSS---TLA--------------TTYSSGNQNEKQIVTTD 355
Cdd:cd07487 145 AGNSGPGPGTITSPG--NSPKVITVGAVDDNGPHDDGISYFSSrgpTGDgrikpdvvapgeniVSCRSPGGNPGAGVGSG 222
                       250       260       270
                ....*....|....*....|....*....|....
gi 6754996  356 LRQKcteshTGTSASAPLAAGIIALTLEANKNLT 389
Cdd:cd07487 223 YFEM-----SGTSMATPHVSGAIALLLQANPILT 251
COG4935 COG4935
Regulatory P domain of the subtilisin-like proprotein convertases and other proteases ...
137-572 8.56e-13

Regulatory P domain of the subtilisin-like proprotein convertases and other proteases [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443962 [Multi-domain]  Cd Length: 641  Bit Score: 71.78  E-value: 8.56e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  137 AWAQGFTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANNGVCGVGVA 216
Cdd:COG4935 223 GAGLAAAGGGGGGAAAAAAAGVGGLGAAATAAAADGGGGGGAGAAGAGGSAGAAAGGAGAGVVGAAAGGGDAALGGAVGA 302
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  217 YNARIGGVRMLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNG 296
Cdd:COG4935 303 AGTGNAAAAAAASAGSGGGGGSAAAAGAAAAAAAAAAGAAAGVSGAASVVAGASGGGAGTAAAAGGGAAAAAAGGAAAAG 382
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  297 GREHDSCNCDGYTNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSGNQNEKQIVTTDLRQKCTESHTGTSASAPLAAG 376
Cdd:COG4935 383 AAAGAAAGAAAGAAAAGGVASAAGAVGAGTAAGASATAAVSTGAASGSSTTSSTGTTATATGLGGGADAGSTSTGTGSAA 462
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  377 IIALTLEANKNLTWRDMQHLVVQTSKPAHLNADDWATNGVGRKVSHSYGYGLLDAGAMVALAQNWTTVAPQRKCIveilv 456
Cdd:COG4935 463 GAAGGTTTATSGLASSTTAAAAAAAAGLATTAAVAAGAAGAAAAAATAASVGGATGAAGTTNSTATFSNTTDVAI----- 537
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  457 ePKDIGKRLEVRKAVTACLgepnhitRLEHVQARLTLSYNRRGDLAIHLISPMGTRSTLLAarPHDYSADGFNdWAFMTT 536
Cdd:COG4935 538 -PDNGPAGVTSTITVSGGG-------AVEDVTVTVDITHTYRGDLVITLISPDGTTVVLKN--RSGGSADNIN-ATFDVA 606
                       410       420       430
                ....*....|....*....|....*....|....*.
gi 6754996  537 HSWDEDPAGEWVLEIENTSEANNyGTLTKFTLVLYG 572
Cdd:COG4935 607 NFSGESANGTWTLRVVDTAGGDT-GTLNSWSLTFTG 641
Peptidases_S8_6 cd07490
Peptidase S8 family domain, uncharacterized subfamily 6; This family is a member of the ...
146-389 2.83e-12

Peptidase S8 family domain, uncharacterized subfamily 6; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173815 [Multi-domain]  Cd Length: 254  Bit Score: 67.57  E-value: 2.83e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  146 GIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPrytqMNDNRHGTRCAGEVAAVANNGVcGVGVAynariGGVR 225
Cdd:cd07490   1 GVTVAVLDTGVDADHPDLAGRVAQWADFDENRRISATEV----FDAGGHGTHVSGTIGGGGAKGV-YIGVA-----PEAD 70
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  226 MLDGEVTDAVEARSLGLnpnhihIYSASWGPEDDGKTVD---GPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGreHDS 302
Cdd:cd07490  71 LLHGKVLDDGGGSLSQI------IAGMEWAVEKDADVVSmslGGTYYSEDPLEEAVEALSNQTGALFVVSAGNEG--HGT 142
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  303 CNCDGYTNSiyTLSISSATQFGNVPWYSeACSSTLATTYSSGNQNEKQIVTTDLRQKCT---------------ESHTGT 367
Cdd:cd07490 143 SGSPGSAYA--ALSVGAVDRDDEDAWFS-SFGSSGASLVSAPDSPPDEYTKPDVAAPGVdvysarqgangdgqyTRLSGT 219
                       250       260
                ....*....|....*....|..
gi 6754996  368 SASAPLAAGIIALTLEANKNLT 389
Cdd:cd07490 220 SMAAPHVAGVAALLAAAHPDLS 241
Peptidases_S8_PCSK9_ProteinaseK_like cd04077
Peptidase S8 family domain in ProteinaseK-like proteins; The peptidase S8 or Subtilase clan of ...
122-389 6.69e-12

Peptidase S8 family domain in ProteinaseK-like proteins; The peptidase S8 or Subtilase clan of proteases have a Asp/His/Ser catalytic triad that is not homologous to trypsin. This CD contains several members of this clan including: PCSK9 (Proprotein convertase subtilisin/kexin type 9), Proteinase_K, Proteinase_T, and other subtilisin-like serine proteases. PCSK9 posttranslationally regulates hepatic low-density lipoprotein receptors (LDLRs) by binding to LDLRs on the cell surface, leading to their degradation. The binding site of PCSK9 has been localized to the epidermal growth factor-like repeat A (EGF-A) domain of the LDLR. Characterized Proteinases K are secreted endopeptidases with a high degree of sequence conservation. Proteinases K are not substrate-specific and function in a wide variety of species in different pathways. It can hydrolyze keratin and other proteins with subtilisin-like specificity. The number of calcium-binding motifs found in these differ. Proteinase T is a novel proteinase from the fungus Tritirachium album Limber. The amino acid sequence of proteinase T as deduced from the nucleotide sequence is about 56% identical to that of proteinase K.


Pssm-ID: 173790 [Multi-domain]  Cd Length: 255  Bit Score: 66.39  E-value: 6.69e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  122 WYLSGVTQRDLNVKEAWAQGF-TGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPqprytqmndNRHGTRCAG 200
Cdd:cd04077   1 WGLDRISQRDLPLDGTYYYDSsTGSGVDVYVLDTGIRTTHVEFGGRAIWGADFVGGDPDSDC---------NGHGTHVAG 71
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  201 EVAAVAnngvcgVGVAYNARIGGVRMLD----GEVTDAVEarslGLNpnhihiYSASWGPEDDGKTV-----DGPARLAE 271
Cdd:cd04077  72 TVGGKT------YGVAKKANLVAVKVLDcngsGTLSGIIA----GLE------WVANDATKRGKPAVanmslGGGASTAL 135
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  272 EAFFRGVSQGrgglGSIFVWASGNGGRehDSCNcdgYT--NSIYTLSISSATQFGNVPWYSE--AC-------SSTLATT 340
Cdd:cd04077 136 DAAVAAAVNA----GVVVVVAAGNSNQ--DACN---YSpaSAPEAITVGATDSDDARASFSNygSCvdifapgVDILSAW 206
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*....
gi 6754996  341 YSSGNqnekqivttdlrqkCTESHTGTSASAPLAAGIIALTLEANKNLT 389
Cdd:cd04077 207 IGSDT--------------ATATLSGTSMAAPHVAGLAAYLLSLGPDLS 241
Peptidases_S8_12 cd07480
Peptidase S8 family domain, uncharacterized subfamily 12; This family is a member of the ...
142-295 9.03e-12

Peptidase S8 family domain, uncharacterized subfamily 12; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173806 [Multi-domain]  Cd Length: 297  Bit Score: 66.63  E-value: 9.03e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  142 FTGHGIVVSILDDGIEKNHPDLAGNYDPGASF----DVNDQdpdpqprytqmndNRHGTRCAGEVAAVANNGVcGVGVAY 217
Cdd:cd07480   5 FTGAGVRVAVLDTGIDLTHPAFAGRDITTKSFvggeDVQDG-------------HGHGTHCAGTIFGRDVPGP-RYGVAR 70
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  218 NARI--GGVRMLDGEVTDA--VEARSLGLNpNHIHIYSASWG-----PEDDGKTVDGPARLAEEAFFRGV---------- 278
Cdd:cd07480  71 GAEIalIGKVLGDGGGGDGgiLAGIQWAVA-NGADVISMSLGadfpgLVDQGWPPGLAFSRALEAYRQRArlfdalmtlv 149
                       170
                ....*....|....*...
gi 6754996  279 -SQGRGGLGSIFVWASGN 295
Cdd:cd07480 150 aAQAALARGTLIVAAAGN 167
FU smart00261
Furin-like repeats;
638-675 7.49e-10

Furin-like repeats;


Pssm-ID: 214589 [Multi-domain]  Cd Length: 45  Bit Score: 54.82  E-value: 7.49e-10
                           10        20        30
                   ....*....|....*....|....*....|....*...
gi 6754996     638 ASVCTPCHASCATCQGPAPTDCLSCPSHASLDpvEQTC 675
Cdd:smart00261   1 DGECKPCHPECATCTGPGPDDCTSCKHGFFLD--GGKC 36
PTZ00262 PTZ00262
subtilisin-like protease; Provisional
149-412 6.11e-09

subtilisin-like protease; Provisional


Pssm-ID: 240338 [Multi-domain]  Cd Length: 639  Bit Score: 59.60  E-value: 6.11e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996   149 VSILDDGIEKNHPDLAGNYDP-----------------------GASFDVNDQDPdpqprytqMNDNRHGTRCAGEVAAV 205
Cdd:PTZ00262 320 ICVIDSGIDYNHPDLHDNIDVnvkelhgrkgidddnngnvddeyGANFVNNDGGP--------MDDNYHGTHVSGIISAI 391
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996   206 ANNGVCGVGVAYNARIGGVRMLD----GEVTDAVEARSLGLNPNhIHIYSASWGPEDDGKTVDGPARLAEEaffrgvsqg 281
Cdd:PTZ00262 392 GNNNIGIVGVDKRSKLIICKALDshklGRLGDMFKCFDYCISRE-AHMINGSFSFDEYSGIFNESVKYLEE--------- 461
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996   282 rggLGSIFVWASGNGGREHDSCN----CDGYTNSIY----------TLSISSATQFGNVPwYSEACSSTLATTYSSGNQN 347
Cdd:PTZ00262 462 ---KGILFVVSASNCSHTKESKPdipkCDLDVNKVYppilskklrnVITVSNLIKDKNNQ-YSLSPNSFYSAKYCQLAAP 537
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 6754996   348 EKQIVTTDLRQKCTEShTGTSASAPLAAGIIALTLEANKNLTWRD----MQHLVVQTskPAHLNADDWA 412
Cdd:PTZ00262 538 GTNIYSTFPKNSYRKL-NGTSMAAPHVAAIASLILSINPSLSYEEviriLKESIVQL--PSLKNKVKWG 603
Peptidases_S8_7 cd07491
Peptidase S8 family domain, uncharacterized subfamily 7; This family is a member of the ...
147-382 7.57e-09

Peptidase S8 family domain, uncharacterized subfamily 7; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173816  Cd Length: 247  Bit Score: 57.34  E-value: 7.57e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  147 IVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPD-PQPRYtqMNDNRHGT---RCAGEVAAVANNGVCGVGVaYNARIG 222
Cdd:cd07491   5 IKVALIDDGVDILDSDLQGKIIGGKSFSPYEGDGNkVSPYY--VSADGHGTamaRMICRICPSAKLYVIKLED-RPSPDS 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  223 GVRMLDGE-VTDAVEARSlglnPNHIHIYSASWGPEDDGKTVDGPARLaEEAFFRGVSQGrgglgsIFVWAS----GNGG 297
Cdd:cd07491  82 NKRSITPQsAAKAIEAAV----EKKVDIISMSWTIKKPEDNDNDINEL-ENAIKEALDRG------ILLFCSasdqGAFT 150
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  298 REHDSCnCDGYTNsiyTLSISSATQFGNV--PWYSEacssTLATTYSSGNQnekqiVTTDLRQKCTES---HTGTSASAP 372
Cdd:cd07491 151 GDTYPP-PAARDR---IFRIGAADEDGGAdaPVGDE----DRVDYILPGEN-----VEARDRPPLSNSfvtHTGSSVATA 217
                       250
                ....*....|
gi 6754996  373 LAAGIIALTL 382
Cdd:cd07491 218 LAAGLAALIL 227
Peptidases_S8_Kp43_protease cd04842
Peptidase S8 family domain in Kp43 proteases; Kp43 proteases are members of the peptidase S8 ...
141-380 1.21e-08

Peptidase S8 family domain in Kp43 proteases; Kp43 proteases are members of the peptidase S8 or Subtilase clan of proteases. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution). Kp43 is topologically similar to kexin and furin both of which are proprotein convertases, but differ in amino acids sequence and the position of its C-terminal barrel. Kp43 has 3 Ca2+ binding sites that differ from the corresponding sites in the other known subtilisin-like proteases. KP-43 protease is known to be an oxidation-resistant protease when compared with the other subtilisin-like proteases


Pssm-ID: 173791 [Multi-domain]  Cd Length: 293  Bit Score: 57.34  E-value: 1.21e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  141 GFTGHGIVVSILDDGIEKNHPDLagnYDPGASfDVNDQDP-----DPQPRYTQMNDNrHGTRCAGEVAAVANNGVCGV-- 213
Cdd:cd04842   3 GLTGKGQIVGVADTGLDTNHCFF---YDPNFN-KTNLFHRkivryDSLSDTKDDVDG-HGTHVAGIIAGKGNDSSSISly 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  214 -GVAYNARIGGVRMLDGEVTDAVEARSLGL----NPNHIHIYSASWGPEDDG------KTVDGPARLAEEAffrgvsqgr 282
Cdd:cd04842  78 kGVAPKAKLYFQDIGDTSGNLSSPPDLNKLfspmYDAGARISSNSWGSPVNNgytllaRAYDQFAYNNPDI--------- 148
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  283 gglgsIFVWASGNGGrehdscncDGYTNSIYTLSISSatqfgNVpwYSEACSSTLATTYSSGNQNEKQIV---------- 352
Cdd:cd04842 149 -----LFVFSAGNDG--------NDGSNTIGSPATAK-----NV--LTVGASNNPSVSNGEGGLGQSDNSdtvasfssrg 208
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*
gi 6754996  353 -TTDLRQK----------------------CTESH----TGTSASAPLAAGIIAL 380
Cdd:cd04842 209 pTYDGRIKpdlvapgtgilsarsggggigdTSDSAytskSGTSMATPLVAGAAAL 263
Peptidases_S8_BacillopeptidaseF-like cd07481
Peptidase S8 family domain in BacillopeptidaseF-like proteins; Bacillus subtilis produces and ...
144-388 1.30e-08

Peptidase S8 family domain in BacillopeptidaseF-like proteins; Bacillus subtilis produces and secretes proteases and other types of exoenzymes at the end of the exponential phase of growth. The ones that make up this group is known as bacillopeptidase F, encoded by bpr, a serine protease with high esterolytic activity which is inhibited by PMSF. Like other members of the peptidases S8 family these have a Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity.


Pssm-ID: 173807 [Multi-domain]  Cd Length: 264  Bit Score: 56.62  E-value: 1.30e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  144 GHGIVVSILDDGIEKNHPDLAGNYDP--GASFDVNDQDPDPQPRYTQMND-NRHGTRCAGevAAVANNGV-CGVGVAYNA 219
Cdd:cd07481   1 GTGIVVANIDTGVDWTHPALKNKYRGwgGGSADHDYNWFDPVGNTPLPYDdNGHGTHTMG--TMVGNDGDgQQIGVAPGA 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  220 RIGGVRMLD---GEVTDAVEARSLGLNPNHI-----------HIYSASWGpeddgktvdGPARLAEeaFFRGVSQGRGGL 285
Cdd:cd07481  79 RWIACRALDrngGNDADYLRCAQWMLAPTDSagnpadpdlapDVINNSWG---------GPSGDNE--WLQPAVAAWRAA 147
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  286 GSIFVWASGNGGREHDSCNCD--GYTNSIYTLSISSATQFGNVpwyseacSSTLATTYSSGNQNekqIVT--TDLRQKCT 361
Cdd:cd07481 148 GIFPVFAAGNDGPRCSTLNAPpaNYPESFAVGATDRNDVLADF-------SSRGPSTYGRIKPD---ISApgVNIRSAVP 217
                       250       260       270
                ....*....|....*....|....*....|.
gi 6754996  362 E----SHTGTSASAPLAAGIIALTLEANKNL 388
Cdd:cd07481 218 GggygSSSGTSMAAPHVAGVAALLWSANPSL 248
Peptidases_S8_Lantibiotic_specific_protease cd07482
Peptidase S8 family domain in Lantiobiotic (lanthionine-containing antibiotics) specific ...
147-389 2.43e-07

Peptidase S8 family domain in Lantiobiotic (lanthionine-containing antibiotics) specific proteases; Lantiobiotic (lanthionine-containing antibiotics) specific proteases are very similar in structure to serine proteases. Lantibiotics are ribosomally synthesised antimicrobial agents derived from ribosomally synthesised peptides with antimicrobial activities against Gram-positive bacteria. The proteases that cleave the N-terminal leader peptides from lantiobiotics include: epiP, nsuP, mutP, and nisP. EpiP, from Staphylococcus, is thought to cleave matured epidermin. NsuP, a dehydratase from Streptococcus and NisP, a membrane-anchored subtilisin-like serine protease from Lactococcus cleave nisin. MutP is highly similar to epiP and nisP and is thought to process the prepeptide mutacin III of S. mutans. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) clan include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53 the it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values.


Pssm-ID: 173808 [Multi-domain]  Cd Length: 294  Bit Score: 53.14  E-value: 2.43e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  147 IVVSILDDGIEKNHPDLAGNYDPGasfdVNDQDPDPQPRYTQMND----------NRHGTRCAGEVAAVANNGvcgvGVA 216
Cdd:cd07482   2 VTVAVIDSGIDPDHPDLKNSISSY----SKNLVPKGGYDGKEAGEtgdindivdkLGHGTAVAGQIAANGNIK----GVA 73
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  217 YNARIGGVRMLD----GEVTDAVEARSLGLNpNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGlGSIFVWA 292
Cdd:cd07482  74 PGIGIVSYRVFGscgsAESSWIIKAIIDAAD-DGVDVINLSLGGYLIIGGEYEDDDVEYNAYKKAINYAKSK-GSIVVAA 151
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  293 SGNGGRE---------HDSCNCDGYTNSIY---------TLSISSATQFGNVPWYSEACSS--TLATTYSSGNQNEKQIV 352
Cdd:cd07482 152 AGNDGLDvsnkqelldFLSSGDDFSVNGEVydvpaslpnVITVSATDNNGNLSSFSNYGNSriDLAAPGGDFLLLDQYGK 231
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|.
gi 6754996  353 TTDLRQK--------------CTESHTGTSASAPLAAGIIALTLEANKNLT 389
Cdd:cd07482 232 EKWVNNGlmtkeqilttapegGYAYMYGTSLAAPKVSGALALIIDKNPLKK 282
FU cd00064
Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is ...
643-675 2.67e-07

Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is a serine-kinase dependent proprotein processor. Other members of this family include endoproteases and cell surface receptors.


Pssm-ID: 238021 [Multi-domain]  Cd Length: 49  Bit Score: 47.90  E-value: 2.67e-07
                        10        20        30
                ....*....|....*....|....*....|...
gi 6754996  643 PCHASCATCQGPAPTDCLSCPSHASLDpvEQTC 675
Cdd:cd00064   1 PCHPSCATCTGPGPDQCTSCRHGFYLD--GGTC 31
FU smart00261
Furin-like repeats;
581-619 1.46e-06

Furin-like repeats;


Pssm-ID: 214589 [Multi-domain]  Cd Length: 45  Bit Score: 45.58  E-value: 1.46e-06
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 6754996     581 PPESSGCKTLTSSQA--CVVCEEGYSLHQKSCVQHCPPGFI 619
Cdd:smart00261   5 KPCHPECATCTGPGPddCTSCKHGFFLDGGKCVSECPPGTY 45
Peptidases_S8_C5a_Peptidase cd07475
Peptidase S8 family domain in Streptococcal C5a peptidases; Streptococcal C5a peptidase (SCP), ...
136-410 1.81e-06

Peptidase S8 family domain in Streptococcal C5a peptidases; Streptococcal C5a peptidase (SCP), is a highly specific protease and adhesin/invasin. The subtilisin-like protease domain is located at the N-terminus and contains a protease-associated domain inserted into a loop. There are three fibronectin type III (Fn) domains at the C-terminus. SCP binds to integrins with the help of Arg-Gly-Asp motifs which are thought to stabilize conformational changes required for substrate binding. Peptidases S8 or Subtilases are a serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173801 [Multi-domain]  Cd Length: 346  Bit Score: 50.73  E-value: 1.81e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  136 EAWAQG-FTGHGIVVSILDDGIEKNHPDLAGNyDPGA-----SFDVNDQDPDPQP------------RYTQMNDN----- 192
Cdd:cd07475   1 PLWDKGgYKGEGMVVAVIDSGVDPTHDAFRLD-DDSKakyseEFEAKKKKAGIGYgkyynekvpfayNYADNNDDilded 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  193 ---RHGTRCAGEVAAVANNGVCG---VGVAYNARIGGVRMLDG-------------EVTDAVEarslgLNPNHIhiySAS 253
Cdd:cd07475  80 dgsSHGMHVAGIVAGNGDEEDNGegiKGVAPEAQLLAMKVFSNpeggstyddayakAIEDAVK-----LGADVI---NMS 151
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  254 WGPEDDGKTVDGPARLA-EEAFFRGVsqgrgglgsIFVWASGNggrehdscncDGYTNSIYTLSISSATQFGNVPWYSEA 332
Cdd:cd07475 152 LGSTAGFVDLDDPEQQAiKRAREAGV---------VVVVAAGN----------DGNSGSGTSKPLATNNPDTGTVGSPAT 212
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  333 CSSTLAT---TYSSGNQNEKQI-------VTTDLRQK-----------CT------ESHTGTSASAPLAAGIIALTLEA- 384
Cdd:cd07475 213 ADDVLTVasaNKKVPNPNGGQMsgfsswgPTPDLDLKpditapggniySTvndntyGYMSGTSMASPHVAGASALVKQRl 292
                       330       340       350
                ....*....|....*....|....*....|...
gi 6754996  385 ---NKNLTWRDMQHLVVQ----TSKPAHLNADD 410
Cdd:cd07475 293 kekYPKLSGEELVDLVKNllmnTATPPLDSEDT 325
Peptidases_S8_11 cd04843
Peptidase S8 family domain, uncharacterized subfamily 11; This family is a member of the ...
132-297 2.04e-06

Peptidase S8 family domain, uncharacterized subfamily 11; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173792  Cd Length: 277  Bit Score: 50.00  E-value: 2.04e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  132 LNVKEAWAQ-GFTGHGIVVSILDDGIEKNHPDLAGNydpGASfdvndqdpdPQPRYTQMNDNRHGTRCAGEVAAvANNGV 210
Cdd:cd04843   2 INARYAWTKpGGSGQGVTFVDIEQGWNLNHEDLVGN---GIT---------LISGLTDQADSDHGTAVLGIIVA-KDNGI 68
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  211 CGVGVAYNARIGGVRMLDGEVT-DAVEARSLGLNPNHIHIYSASWGPEDdgktVDGPARLAE--EAFFRGVSQGRgGLGS 287
Cdd:cd04843  69 GVTGIAHGAQAAVVSSTRVSNTaDAILDAADYLSPGDVILLEMQTGGPN----NGYPPLPVEyeQANFDAIRTAT-DLGI 143
                       170
                ....*....|
gi 6754996  288 IFVWASGNGG 297
Cdd:cd04843 144 IVVEAAGNGG 153
Peptidases_S8_8 cd07492
Peptidase S8 family domain, uncharacterized subfamily 8; This family is a member of the ...
146-402 2.18e-06

Peptidase S8 family domain, uncharacterized subfamily 8; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173817 [Multi-domain]  Cd Length: 222  Bit Score: 49.26  E-value: 2.18e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  146 GIVVSILDDGIEKNHPDLAGN------YDPGASFDVNDQDPDpqprytqmnDNRHGTRCAGEVAAVANNGVcgvgvayna 219
Cdd:cd07492   1 GVRVAVIDSGVDTDHPDLGNLaldgevTIDLEIIVVSAEGGD---------KDGHGTACAGIIKKYAPEAE--------- 62
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  220 rIGGVRML--DGEVTDAVEARSLG-LNPNHIHIYSASWG-PEDDGKTVDGpaRLAEEAFFRGVsqgrgglgsIFVWASGN 295
Cdd:cd07492  63 -IGSIKILgeDGRCNSFVLEKALRaCVENDIRIVNLSLGgPGDRDFPLLK--ELLEYAYKAGG---------IIVAAAPN 130
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  296 GGREhdscncdGYTNSIYTLSI---SSATQFGNVPWYSEACsstlattYSSGNQNekqiVTTDLRQKCTESHTGTSASAP 372
Cdd:cd07492 131 NNDI-------GTPPASFPNVIgvkSDTADDPKSFWYIYVE-------FSADGVD----IIAPAPHGRYLTVSGNSFAAP 192
                       250       260       270
                ....*....|....*....|....*....|
gi 6754996  373 LAAGIIALTLEANKNLTWRDMQHLVVQTSK 402
Cdd:cd07492 193 HVTGMVALLLSEKPDIDANDLKRLLQRLAV 222
Peptidases_S8_10 cd07494
Peptidase S8 family domain, uncharacterized subfamily 10; This family is a member of the ...
132-415 2.81e-06

Peptidase S8 family domain, uncharacterized subfamily 10; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173819 [Multi-domain]  Cd Length: 298  Bit Score: 49.78  E-value: 2.81e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  132 LNVKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNY------DPGASfdvndqDPdpqprytQMNDNRHGTrcaGEVAAV 205
Cdd:cd07494   8 LNATRVHQRGITGRGVRVAMVDTGFYAHPFFESRGYqvrvvlAPGAT------DP-------ACDENGHGT---GESANL 71
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  206 anngvcgVGVAYNARIGGVRMLDGEVTDAVEA--RSLGLNPNhihIYSASWGPEDDGKTVDGPARLA----------EEA 273
Cdd:cd07494  72 -------FAIAPGAQFIGVKLGGPDLVNSVGAfkKAISLSPD---IISNSWGYDLRSPGTSWSRSLPnalkalaatlQDA 141
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  274 FFRGV----SQGRGGL------------GSIFVwasGNGGREHDSCNCDGYTNSIYtlsisSATQfgnVPwysEAC---- 333
Cdd:cd07494 142 VARGIvvvfSAGNGGWsfpaqhpeviaaGGVFV---DEDGARRASSYASGFRSKIY-----PGRQ---VP---DVCglvg 207
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  334 ----SSTLATTYSSGNQNEkqiVTTDLRQKCTESH------TGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKP 403
Cdd:cd07494 208 mlphAAYLMLPVPPGSQLD---RSCAAFPDGTPPNdgwgvfSGTSAAAPQVAGVCALMLQANPGLSPERARSLLNKTARD 284
                       330
                ....*....|..
gi 6754996  404 AHLNADDWATNG 415
Cdd:cd07494 285 VTKGASAQGTSA 296
Peptidases_S8_14 cd07497
Peptidase S8 family domain, uncharacterized subfamily 14; This family is a member of the ...
144-329 3.61e-06

Peptidase S8 family domain, uncharacterized subfamily 14; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173821 [Multi-domain]  Cd Length: 311  Bit Score: 49.78  E-value: 3.61e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  144 GHGIVVSILDDGIEKNHPDLA--GNYDPGASFDvndqDP-------DPQPR-YTQMND-NRHGTRCAGEVAAVANNGVCG 212
Cdd:cd07497   1 GEGVVIAIVDTGVDYSHPDLDiyGNFSWKLKFD----YKayllpgmDKWGGfYVIMYDfFSHGTSCASVAAGRGKMEYNL 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  213 ---------VGVAYNARIGGVRMLDGEVTDAVEARSLGLNPNH------------IHIYSASWGPEDDGKTVDGPARLAE 271
Cdd:cd07497  77 ygytgkfliRGIAPDAKIAAVKALWFGDVIYAWLWTAGFDPVDrklswiytggprVDVISNSWGISNFAYTGYAPGLDIS 156
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 6754996  272 EAFFRGVSQGRgglGSIFVWASGNGGREHDSCNCDGytNSIYTLSISSATQFGNVPWY 329
Cdd:cd07497 157 SLVIDALVTYT---GVPIVSAAGNGGPGYGTITAPG--AASLAISVGAATNFDYRPFY 209
Peptidases_S53_like cd05562
Peptidase domain in the S53 family; Members of the peptidase S53 (sedolisin) family include ...
365-437 1.05e-05

Peptidase domain in the S53 family; Members of the peptidase S53 (sedolisin) family include endopeptidases and exopeptidases. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of Asn in subtilisin. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Characterized sedolisins include Kumamolisin, an extracellular calcium-dependent thermostable endopeptidase from Bacillus. The enzyme is synthesized with a 188 amino acid N-terminal preprotein region which is cleaved after the extraction into the extracellular space with low pH. One kumamolysin paralog, kumamolisin-As, is believed to be a collagenase. TPP1 is a serine protease that functions as a tripeptidyl exopeptidase as well as an endopeptidase. Less is known about PSCP from Pseudomonas which is thought to be an aspartic proteinase.


Pssm-ID: 173798 [Multi-domain]  Cd Length: 275  Bit Score: 48.06  E-value: 1.05e-05
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 6754996  365 TGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTskpahlnADDWATNGvgrkVSHSYGYGLLDAGAMVAL 437
Cdd:cd05562 214 FGTSAAAPHAAGVAALVLSANPGLTPADIRDALRST-------ALDMGEPG----YDNASGSGLVDADRAVAA 275
FU cd00064
Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is ...
584-621 1.28e-05

Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is a serine-kinase dependent proprotein processor. Other members of this family include endoproteases and cell surface receptors.


Pssm-ID: 238021 [Multi-domain]  Cd Length: 49  Bit Score: 42.89  E-value: 1.28e-05
                        10        20        30        40
                ....*....|....*....|....*....|....*....|
gi 6754996  584 SSGCKTLTSS--QACVVCEEGYSLHQKSCVQHCPPGFIPQ 621
Cdd:cd00064   3 HPSCATCTGPgpDQCTSCRHGFYLDGGTCVSECPEGTYAD 42
VSP pfam03302
Giardia variant-specific surface protein;
594-668 2.26e-05

Giardia variant-specific surface protein;


Pssm-ID: 146106 [Multi-domain]  Cd Length: 397  Bit Score: 47.66  E-value: 2.26e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 6754996    594 QACVVCEEGYSL--HQKSCVQHCPPGFipqvldthYSTendveiirASVCTPCHASCATCQGPAPTDCLSCPSHASL 668
Cdd:pfam03302  74 KICKECTVANCKtcEDQGQCQACNDGF--------YKS--------GDACSPCHESCKTCSGGTASDCTECLTGKAL 134
GF_recep_IV pfam14843
Growth factor receptor domain IV; This is the fourth extracellular domain of receptor tyrosine ...
596-662 1.03e-04

Growth factor receptor domain IV; This is the fourth extracellular domain of receptor tyrosine protein kinases. Interaction between this domain and the furin-like domain (pfam00757) regulates the binding of ligands to the receptor L domains (pfam01030).


Pssm-ID: 464344 [Multi-domain]  Cd Length: 132  Bit Score: 42.75  E-value: 1.03e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 6754996    596 CVVCEegYSLHQKSCVQHCPpgfIPQVLDTHYSTEndveiiraSVCTPCHASC------ATCQGPAPTDCLSC 662
Cdd:pfam14843  19 CLSCR--NFSRGGTCVESCN---ILQGEPREYVVN--------STCVPCHPEClpqngtATCSGPGADNCTKC 78
Furin-like_2 pfam15913
Furin-like repeat, cysteine-rich; The furin-like cysteine rich region has been found in a ...
584-621 1.45e-03

Furin-like repeat, cysteine-rich; The furin-like cysteine rich region has been found in a variety of proteins from eukaryotes that are involved in the mechanism of signal transduction by receptor tyrosine kinases, which involves receptor aggregation.


Pssm-ID: 464939 [Multi-domain]  Cd Length: 102  Bit Score: 38.95  E-value: 1.45e-03
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 6754996    584 SSGCKTLTSSQACVVCEEGYSLHQKSCVQHCPPGFIPQ 621
Cdd:pfam15913  59 AENCESCFSKDFCTKCKEGFYLHKGKCLDTCPEGTAAQ 96
TNFRSF1B cd10577
Tumor necrosis factor receptor superfamily member 1B (TNFRSF1B), also known as TNFR2; TNFRSF1B ...
596-675 2.26e-03

Tumor necrosis factor receptor superfamily member 1B (TNFRSF1B), also known as TNFR2; TNFRSF1B (also known as TNFR2, type 2 TNFR, TNFBR, TNFR80, TNF-R75, TNF-R-II, p75, CD120b) binds TNF-alpha, but lacks the death domain (DD) that is associated with the cytoplasmic domain of TNFRSF1A (TNFR1). It is inducible and expressed exclusively by oligodendrocytes, astrocytes, T cells, thymocytes, myocytes, endothelial cells, and in human mesenchymal stem cells. TNFRSF1B protects oligodendrocyte progenitor cells (OLGs) against oxidative stress, and induces the up-regulation of cell survival genes. While pro-inflammatory and pathogen-clearing activities of TNF are mediated mainly through activation of TNFRSF1A, a strong activator of NF-kappaB, TNFRSF1B is more responsible for suppression of inflammation. Although the affinities of both receptors for soluble TNF are similar, TNFRSF1B is sometimes more abundantly expressed and thought to associate with TNF, thereby increasing its concentration near TNFRSF1A receptors, and making TNF available to activate TNFRSF1A (a ligand-passing mechanism).


Pssm-ID: 276903 [Multi-domain]  Cd Length: 163  Bit Score: 39.38  E-value: 2.26e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996  596 CVVCEEGYSLHQKSCVQHCPPGFIPQVLDTHYSTendveiiraSVCTPCHASCATCQGPAPTDCLSCPSHASLDPVE-QT 674
Cdd:cd10577   1 CRNSKEYYDEKAQMCCSKCPPGQHVKHSCTKTSD---------TVCAPCEESTYTQLWNWVPECLSCSSPCSSDQVEtQA 71

                .
gi 6754996  675 C 675
Cdd:cd10577  72 C 72
VSP pfam03302
Giardia variant-specific surface protein;
582-664 3.50e-03

Giardia variant-specific surface protein;


Pssm-ID: 146106 [Multi-domain]  Cd Length: 397  Bit Score: 40.72  E-value: 3.50e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996    582 PESSGCKTLTSSQACVVCEEGYSLHQKSCVQhCPPGFIPQVLDTHYSTENDVEIIRASVCTPCHASCATCQGpAPTDCLS 661
Cdd:pfam03302 228 PGKSVCEEANSGGTCQKEAPGYKLNNGDLVT-CSPGCKTCTSNTVCTTCMDGYVKTSDSCTKCDSSCETCTG-ATTTCKT 305

                  ...
gi 6754996    662 CPS 664
Cdd:pfam03302 306 CAT 308
PTZ00214 PTZ00214
high cysteine membrane protein Group 4; Provisional
585-670 5.46e-03

high cysteine membrane protein Group 4; Provisional


Pssm-ID: 173479 [Multi-domain]  Cd Length: 800  Bit Score: 40.28  E-value: 5.46e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754996   585 SGCKTL---TSSQACVVCEEGY-SLHQKSCVQHCP---PGFIPQVLDTHYSTENDVEII-------RASVCTPCHASCAT 650
Cdd:PTZ00214 362 SGCATCgynSGAVTCTRCSAGYlGVDGKSCSESCSgdtRGVCTKVAEGSESTEVSCRCVckptfynSSGTCTPCTDSCAV 441
                         90       100
                 ....*....|....*....|
gi 6754996   651 CQGPAPTDCLSCPSHASLDP 670
Cdd:PTZ00214 442 CKDGTPTGCQQCSPGKILEF 461
Peptidases_S8_SKI-1_like cd07479
Peptidase S8 family domain in SKI-1-like proteins; SKI-1 (type I membrane-bound ...
138-161 9.01e-03

Peptidase S8 family domain in SKI-1-like proteins; SKI-1 (type I membrane-bound subtilisin-kexin-isoenzyme) proteins are secretory Ca2+-dependent serine proteinases cleave at nonbasic residues: Thr, Leu, and Lys. SKI-1s play a critical role in the regulation of the synthesis and metabolism of cholesterol and fatty acid metabolism. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The S53 family contains a catalytic triad Glu/Asp/Ser. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173805 [Multi-domain]  Cd Length: 255  Bit Score: 38.59  E-value: 9.01e-03
                        10        20
                ....*....|....*....|....
gi 6754996  138 WAQGFTGHGIVVSILDDGIEKNHP 161
Cdd:cd07479   1 WQLGYTGAGVKVAVFDTGLAKDHP 24
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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