|
Name |
Accession |
Description |
Interval |
E-value |
| PTZ00187 |
PTZ00187 |
succinyl-CoA synthetase alpha subunit; Provisional |
19-344 |
0e+00 |
|
succinyl-CoA synthetase alpha subunit; Provisional
Pssm-ID: 240307 [Multi-domain] Cd Length: 317 Bit Score: 505.79 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255958286 19 SGLAAARLLSRTFLLQqngirhgsYTASRKHIYIDKNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQKHL-- 96
Cdd:PTZ00187 1 LKGAAFMILKVSFRAR--------SSTSAPRVWVNKNTKVICQGITGKQGTFHTEQAIEYGTKMVGGVNPKKAGTTHLkh 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255958286 97 GLPVFNTVKEAKEKTGATASVIYVPPPFAAAAINEAIDAEIPLVVCITEGIPQQDMVRVKHRLTRQGTTRLIGPNCPGVI 176
Cdd:PTZ00187 73 GLPVFATVKEAKKATGADASVIYVPPPHAASAIIEAIEAEIPLVVCITEGIPQHDMVKVKHALLSQNKTRLIGPNCPGII 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255958286 177 NPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCIGIGGDPFNGTDFIDCLEVFLNDPATEGIILIG 256
Cdd:PTZ00187 153 KPGECKIGIMPGHIHKKGKIGIVSRSGTLTYEAVAQTTAVGLGQSTCVGIGGDPFNGTNFIDCLKLFLNDPETEGIILIG 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255958286 257 EIGGHAEENAAAFLKEHnsgPKAKPVVSFIAGITAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTI 336
Cdd:PTZ00187 233 EIGGTAEEEAAEWIKNN---PIKKPVVSFIAGITAPPGRRMGHAGAIISGGKGTAPGKIEALEAAGVRVVKSPAQLGKTM 309
|
....*...
gi 255958286 337 YKEFEKRK 344
Cdd:PTZ00187 310 LEVMKKKG 317
|
|
| SucD |
COG0074 |
Succinyl-CoA synthetase, alpha subunit [Energy production and conversion]; Succinyl-CoA ... |
49-338 |
3.20e-167 |
|
Succinyl-CoA synthetase, alpha subunit [Energy production and conversion]; Succinyl-CoA synthetase, alpha subunit is part of the Pathway/BioSystem: TCA cycle
Pssm-ID: 439844 [Multi-domain] Cd Length: 288 Bit Score: 467.23 E-value: 3.20e-167
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255958286 49 HIYIDKNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQKHLGLPVFNTVKEAKEKTGATASVIYVPPPFAAAA 128
Cdd:COG0074 1 SILVNKNTRVIVQGITGKEGSFHTKQMLAYGTNVVAGVTPGKGGQTVLGVPVFDTVAEAVEETGADASVIFVPPPFAADA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255958286 129 INEAIDAEIPLVVCITEGIPQQDMVRVKHRLTRQGTtRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYE 208
Cdd:COG0074 81 ILEAIDAGIKLIVCITEGIPVLDMVRVKRYAKAKGT-RLIGPNCPGIITPGECKLGIMPGHIFKPGRVGIVSRSGTLTYE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255958286 209 AVHQTTQVGLGQSLCIGIGGDPFNGTDFIDCLEVFLNDPATEGIILIGEIGGHAEENAAAFLKEHNSgpkaKPVVSFIAG 288
Cdd:COG0074 160 AVWQLTQAGLGQSTCVGIGGDPIIGTSFIDVLELFEEDPETEAIVMIGEIGGSAEEEAAEYIKENMT----KPVVAYIAG 235
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 255958286 289 ITAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTIYK 338
Cdd:COG0074 236 RTAPPGKRMGHAGAIISGGKGTAESKIEALEAAGVPVAESPSEIGELLKK 285
|
|
| sucCoAalpha |
TIGR01019 |
succinyl-CoA synthetase, alpha subunit; This model describes succinyl-CoA synthetase alpha ... |
50-336 |
1.62e-152 |
|
succinyl-CoA synthetase, alpha subunit; This model describes succinyl-CoA synthetase alpha subunits but does not discriminate between GTP-specific and ATP-specific reactions. The model is designated as subfamily rather than equivalog for that reason. ATP citrate lyases appear to form an outgroup. [Energy metabolism, TCA cycle]
Pssm-ID: 130091 [Multi-domain] Cd Length: 286 Bit Score: 429.91 E-value: 1.62e-152
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255958286 50 IYIDKNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQKHLGLPVFNTVKEAKEKTGATASVIYVPPPFAAAAI 129
Cdd:TIGR01019 1 ILLDKDTKVIVQGITGSQGSFHTEQMLAYGTNIVGGVTPGKGGTTVLGLPVFDSVKEAVEETGANASVIFVPAPFAADAI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255958286 130 NEAIDAEIPLVVCITEGIPQQDMVRVKHRLTRQGTtRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEA 209
Cdd:TIGR01019 81 FEAIDAGIELIVCITEGIPVHDMLKVKRYMEESGT-RLIGPNCPGIITPGECKIGIMPGHIHKPGNVGIVSRSGTLTYEA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255958286 210 VHQTTQVGLGQSLCIGIGGDPFNGTDFIDCLEVFLNDPATEGIILIGEIGGHAEENAAAFLKEHNSgpkaKPVVSFIAGI 289
Cdd:TIGR01019 160 VHQLTKAGFGQSTCVGIGGDPVNGTSFIDVLEAFEKDPETEAIVMIGEIGGSAEEEAADFIKQNMS----KPVVGFIAGA 235
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 255958286 290 TAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTI 336
Cdd:TIGR01019 236 TAPPGKRMGHAGAIISGGKGTAESKIEALEAAGVTVVKSPSDIGELL 282
|
|
| CoA_binding |
pfam02629 |
CoA binding domain; This domain has a Rossmann fold and is found in a number of proteins ... |
53-146 |
2.32e-38 |
|
CoA binding domain; This domain has a Rossmann fold and is found in a number of proteins including succinyl CoA synthetases, malate and ATP-citrate ligases.
Pssm-ID: 396961 [Multi-domain] Cd Length: 97 Bit Score: 131.95 E-value: 2.32e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255958286 53 DKNTKIICQGFTGK--QGT-FHSQQALEYGTKLVGGTTPGKGGQKHLGLPVFNTVKEAKEKTGATASVIYVPPPFAAAAI 129
Cdd:pfam02629 1 DKDTKVIVIGAGGLgiQGLnYHFIQMLGYGIKMVFGVNPGKGGTEILGIPVYNSVDELEEKTGVDVAVITVPAPFAQEAI 80
|
90
....*....|....*..
gi 255958286 130 NEAIDAEIPLVVCITEG 146
Cdd:pfam02629 81 DELVDAGIKGIVNITPG 97
|
|
| CoA_binding |
smart00881 |
CoA binding domain; This domain has a Rossmann fold and is found in a number of proteins ... |
52-147 |
5.23e-35 |
|
CoA binding domain; This domain has a Rossmann fold and is found in a number of proteins including succinyl CoA synthetases, malate and ATP-citrate ligases.
Pssm-ID: 214881 [Multi-domain] Cd Length: 100 Bit Score: 123.39 E-value: 5.23e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255958286 52 IDKNTKIICQGFTGKQGTFHSQQA---LEYGTKLVGGTTPGKGGQKHLGLPVFNTVKEAKEKTGATASVIYVPPPFAAAA 128
Cdd:smart00881 2 LNPNTSVAVVGASGNLGSFGLAVMrnlLEYGTKFVGGVYPGKVGPKVDGVPVYDSVAEAPEETGVDVAVIFVPAEAAPDA 81
|
90
....*....|....*....
gi 255958286 129 INEAIDAEIPLVVCITEGI 147
Cdd:smart00881 82 IDEAIEAGIKGIVVITEGI 100
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PTZ00187 |
PTZ00187 |
succinyl-CoA synthetase alpha subunit; Provisional |
19-344 |
0e+00 |
|
succinyl-CoA synthetase alpha subunit; Provisional
Pssm-ID: 240307 [Multi-domain] Cd Length: 317 Bit Score: 505.79 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255958286 19 SGLAAARLLSRTFLLQqngirhgsYTASRKHIYIDKNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQKHL-- 96
Cdd:PTZ00187 1 LKGAAFMILKVSFRAR--------SSTSAPRVWVNKNTKVICQGITGKQGTFHTEQAIEYGTKMVGGVNPKKAGTTHLkh 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255958286 97 GLPVFNTVKEAKEKTGATASVIYVPPPFAAAAINEAIDAEIPLVVCITEGIPQQDMVRVKHRLTRQGTTRLIGPNCPGVI 176
Cdd:PTZ00187 73 GLPVFATVKEAKKATGADASVIYVPPPHAASAIIEAIEAEIPLVVCITEGIPQHDMVKVKHALLSQNKTRLIGPNCPGII 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255958286 177 NPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCIGIGGDPFNGTDFIDCLEVFLNDPATEGIILIG 256
Cdd:PTZ00187 153 KPGECKIGIMPGHIHKKGKIGIVSRSGTLTYEAVAQTTAVGLGQSTCVGIGGDPFNGTNFIDCLKLFLNDPETEGIILIG 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255958286 257 EIGGHAEENAAAFLKEHnsgPKAKPVVSFIAGITAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTI 336
Cdd:PTZ00187 233 EIGGTAEEEAAEWIKNN---PIKKPVVSFIAGITAPPGRRMGHAGAIISGGKGTAPGKIEALEAAGVRVVKSPAQLGKTM 309
|
....*...
gi 255958286 337 YKEFEKRK 344
Cdd:PTZ00187 310 LEVMKKKG 317
|
|
| SucD |
COG0074 |
Succinyl-CoA synthetase, alpha subunit [Energy production and conversion]; Succinyl-CoA ... |
49-338 |
3.20e-167 |
|
Succinyl-CoA synthetase, alpha subunit [Energy production and conversion]; Succinyl-CoA synthetase, alpha subunit is part of the Pathway/BioSystem: TCA cycle
Pssm-ID: 439844 [Multi-domain] Cd Length: 288 Bit Score: 467.23 E-value: 3.20e-167
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255958286 49 HIYIDKNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQKHLGLPVFNTVKEAKEKTGATASVIYVPPPFAAAA 128
Cdd:COG0074 1 SILVNKNTRVIVQGITGKEGSFHTKQMLAYGTNVVAGVTPGKGGQTVLGVPVFDTVAEAVEETGADASVIFVPPPFAADA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255958286 129 INEAIDAEIPLVVCITEGIPQQDMVRVKHRLTRQGTtRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYE 208
Cdd:COG0074 81 ILEAIDAGIKLIVCITEGIPVLDMVRVKRYAKAKGT-RLIGPNCPGIITPGECKLGIMPGHIFKPGRVGIVSRSGTLTYE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255958286 209 AVHQTTQVGLGQSLCIGIGGDPFNGTDFIDCLEVFLNDPATEGIILIGEIGGHAEENAAAFLKEHNSgpkaKPVVSFIAG 288
Cdd:COG0074 160 AVWQLTQAGLGQSTCVGIGGDPIIGTSFIDVLELFEEDPETEAIVMIGEIGGSAEEEAAEYIKENMT----KPVVAYIAG 235
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 255958286 289 ITAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTIYK 338
Cdd:COG0074 236 RTAPPGKRMGHAGAIISGGKGTAESKIEALEAAGVPVAESPSEIGELLKK 285
|
|
| PRK05678 |
PRK05678 |
succinyl-CoA synthetase subunit alpha; Validated |
50-336 |
1.67e-166 |
|
succinyl-CoA synthetase subunit alpha; Validated
Pssm-ID: 180194 [Multi-domain] Cd Length: 291 Bit Score: 465.42 E-value: 1.67e-166
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255958286 50 IYIDKNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQKHLGLPVFNTVKEAKEKTGATASVIYVPPPFAAAAI 129
Cdd:PRK05678 3 ILINKDTKVIVQGITGKQGTFHTEQMLAYGTNIVGGVTPGKGGTTVLGLPVFNTVAEAVEATGANASVIYVPPPFAADAI 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255958286 130 NEAIDAEIPLVVCITEGIPQQDMVRVKHRLTRQGtTRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEA 209
Cdd:PRK05678 83 LEAIDAGIDLIVCITEGIPVLDMLEVKAYLERKK-TRLIGPNCPGIITPGECKIGIMPGHIHKKGRVGVVSRSGTLTYEA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255958286 210 VHQTTQVGLGQSLCIGIGGDPFNGTDFIDCLEVFLNDPATEGIILIGEIGGHAEENAAAFLKEHNSgpkaKPVVSFIAGI 289
Cdd:PRK05678 162 VAQLTDLGFGQSTCVGIGGDPINGTNFIDVLEAFEEDPETEAIVMIGEIGGSAEEEAAEYIKANVT----KPVVGYIAGV 237
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 255958286 290 TAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTI 336
Cdd:PRK05678 238 TAPPGKRMGHAGAIISGGKGTAEEKKEALEAAGVKVARTPSEIGELL 284
|
|
| PLN00125 |
PLN00125 |
Succinyl-CoA ligase [GDP-forming] subunit alpha |
44-346 |
8.44e-158 |
|
Succinyl-CoA ligase [GDP-forming] subunit alpha
Pssm-ID: 215066 [Multi-domain] Cd Length: 300 Bit Score: 444.03 E-value: 8.44e-158
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255958286 44 TASRKHIYIDKNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQKHLGLPVFNTVKEAKEKTGATASVIYVPPP 123
Cdd:PLN00125 1 ASPPPAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASVIYVPPP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255958286 124 FAAAAINEAIDAEIPLVVCITEGIPQQDMVRVKHRLTRQGTTRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSG 203
Cdd:PLN00125 81 FAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255958286 204 TLTYEAVHQTTQVGLGQSLCIGIGGDPFNGTDFIDCLEVFLNDPATEGIILIGEIGGHAEENAAAFLKEhnSGPKaKPVV 283
Cdd:PLN00125 161 TLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCLEKFVKDPQTEGIILIGEIGGTAEEDAAAFIKE--SGTE-KPVV 237
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 255958286 284 SFIAGITAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTIYKEFEKRKML 346
Cdd:PLN00125 238 AFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTVVESPAKIGVAMLEVFKERGLL 300
|
|
| sucCoAalpha |
TIGR01019 |
succinyl-CoA synthetase, alpha subunit; This model describes succinyl-CoA synthetase alpha ... |
50-336 |
1.62e-152 |
|
succinyl-CoA synthetase, alpha subunit; This model describes succinyl-CoA synthetase alpha subunits but does not discriminate between GTP-specific and ATP-specific reactions. The model is designated as subfamily rather than equivalog for that reason. ATP citrate lyases appear to form an outgroup. [Energy metabolism, TCA cycle]
Pssm-ID: 130091 [Multi-domain] Cd Length: 286 Bit Score: 429.91 E-value: 1.62e-152
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255958286 50 IYIDKNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQKHLGLPVFNTVKEAKEKTGATASVIYVPPPFAAAAI 129
Cdd:TIGR01019 1 ILLDKDTKVIVQGITGSQGSFHTEQMLAYGTNIVGGVTPGKGGTTVLGLPVFDSVKEAVEETGANASVIFVPAPFAADAI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255958286 130 NEAIDAEIPLVVCITEGIPQQDMVRVKHRLTRQGTtRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEA 209
Cdd:TIGR01019 81 FEAIDAGIELIVCITEGIPVHDMLKVKRYMEESGT-RLIGPNCPGIITPGECKIGIMPGHIHKPGNVGIVSRSGTLTYEA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255958286 210 VHQTTQVGLGQSLCIGIGGDPFNGTDFIDCLEVFLNDPATEGIILIGEIGGHAEENAAAFLKEHNSgpkaKPVVSFIAGI 289
Cdd:TIGR01019 160 VHQLTKAGFGQSTCVGIGGDPVNGTSFIDVLEAFEKDPETEAIVMIGEIGGSAEEEAADFIKQNMS----KPVVGFIAGA 235
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 255958286 290 TAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTI 336
Cdd:TIGR01019 236 TAPPGKRMGHAGAIISGGKGTAESKIEALEAAGVTVVKSPSDIGELL 282
|
|
| CoA_binding |
pfam02629 |
CoA binding domain; This domain has a Rossmann fold and is found in a number of proteins ... |
53-146 |
2.32e-38 |
|
CoA binding domain; This domain has a Rossmann fold and is found in a number of proteins including succinyl CoA synthetases, malate and ATP-citrate ligases.
Pssm-ID: 396961 [Multi-domain] Cd Length: 97 Bit Score: 131.95 E-value: 2.32e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255958286 53 DKNTKIICQGFTGK--QGT-FHSQQALEYGTKLVGGTTPGKGGQKHLGLPVFNTVKEAKEKTGATASVIYVPPPFAAAAI 129
Cdd:pfam02629 1 DKDTKVIVIGAGGLgiQGLnYHFIQMLGYGIKMVFGVNPGKGGTEILGIPVYNSVDELEEKTGVDVAVITVPAPFAQEAI 80
|
90
....*....|....*..
gi 255958286 130 NEAIDAEIPLVVCITEG 146
Cdd:pfam02629 81 DELVDAGIKGIVNITPG 97
|
|
| CoA_binding |
smart00881 |
CoA binding domain; This domain has a Rossmann fold and is found in a number of proteins ... |
52-147 |
5.23e-35 |
|
CoA binding domain; This domain has a Rossmann fold and is found in a number of proteins including succinyl CoA synthetases, malate and ATP-citrate ligases.
Pssm-ID: 214881 [Multi-domain] Cd Length: 100 Bit Score: 123.39 E-value: 5.23e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255958286 52 IDKNTKIICQGFTGKQGTFHSQQA---LEYGTKLVGGTTPGKGGQKHLGLPVFNTVKEAKEKTGATASVIYVPPPFAAAA 128
Cdd:smart00881 2 LNPNTSVAVVGASGNLGSFGLAVMrnlLEYGTKFVGGVYPGKVGPKVDGVPVYDSVAEAPEETGVDVAVIFVPAEAAPDA 81
|
90
....*....|....*....
gi 255958286 129 INEAIDAEIPLVVCITEGI 147
Cdd:smart00881 82 IDEAIEAGIKGIVVITEGI 100
|
|
| Ligase_CoA |
pfam00549 |
CoA-ligase; This family includes the CoA ligases Succinyl-CoA synthetase alpha and beta chains, ... |
199-324 |
7.58e-23 |
|
CoA-ligase; This family includes the CoA ligases Succinyl-CoA synthetase alpha and beta chains, malate CoA ligase and ATP-citrate lyase. Some members of the family utilize ATP others use GTP.
Pssm-ID: 395434 [Multi-domain] Cd Length: 128 Bit Score: 92.32 E-value: 7.58e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255958286 199 VSRSGTLTYEAVHQTTQVGLGQSLCIGIGGDPFNGTDFIDCLEVFLNDPATEGIILIGEIGGHAEEN-AAAFLKEHN-SG 276
Cdd:pfam00549 1 LVNGGTLAMEAMDLIKLAGGGPHNFIDLGGDAFTPTTRIDALKLEAADPEVKVILLDIVLGYGACEDpAGGLLKAIKeAR 80
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 255958286 277 PKAKPVVSFIAGITAPPGRRMGHAGAIIAGGKGGAKEKISALQSAGVV 324
Cdd:pfam00549 81 ARELPVVARVCGTEADPQGRSGQAKALAESGVLIASSNNQALRAAGAV 128
|
|
| PLN02522 |
PLN02522 |
ATP citrate (pro-S)-lyase |
92-342 |
2.45e-17 |
|
ATP citrate (pro-S)-lyase
Pssm-ID: 178137 [Multi-domain] Cd Length: 608 Bit Score: 82.95 E-value: 2.45e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255958286 92 GQKHLGLPVFNTVKEAKEKTgATASVIYVPPPF--AAAAINEAIDAE-IPLVVCITEGIPQQDMVRVkHRLTRQGTTRLI 168
Cdd:PLN02522 57 GQEEIAIPVHGSIEAACKAH-PTADVFINFASFrsAAASSMEALKQPtIRVVAIIAEGVPESDTKQL-IAYARANNKVVI 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255958286 169 GPNCPGVINPGECKIG--------IMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCIGIGGDPFNGTDFIDCL 240
Cdd:PLN02522 135 GPATVGGIQAGAFKIGdtagtldnIIQCKLYRPGSVGFVSKSGGMSNEMYNVIARVTDGIYEGIAIGGDVFPGSTLSDHV 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255958286 241 EVFLNDPATEGIILIGEIGGHAEENAAAFLKehnSGPKAKPVVSFIAGITA---PPGRRMGHAGAIIAGGKGGAKEKISA 317
Cdd:PLN02522 215 LRFNNIPQIKMIVVLGELGGRDEYSLVEALK---QGKVSKPVVAWVSGTCArlfKSEVQFGHAGAKSGGDMESAQAKNKA 291
|
250 260
....*....|....*....|....*
gi 255958286 318 LQSAGVVVSMSPAQLGTTIYKEFEK 342
Cdd:PLN02522 292 LKDAGAIVPTSFEALEAAIKETFEK 316
|
|
| PatZN |
COG1042 |
Acyl-CoA synthetase (NDP forming) [Energy production and conversion]; |
117-249 |
6.21e-13 |
|
Acyl-CoA synthetase (NDP forming) [Energy production and conversion];
Pssm-ID: 440664 [Multi-domain] Cd Length: 708 Bit Score: 69.77 E-value: 6.21e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255958286 117 VIYVPPPFAAAAINEAIDAEIPLVVCIT--------EGIPQQDMVRvkhRLTRQGTTRLIGPNCPGVINPGeckIGIM-- 186
Cdd:COG1042 74 VIAVPAETVPDVVEECGEKGVKAAVVISagfaetgeEGAALEQELL---EIARRYGMRLLGPNCLGLINPA---TGLNat 147
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 255958286 187 --PGHIhKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCIGIGgdpfNGTD--FIDCLEVFLNDPAT 249
Cdd:COG1042 148 faPVPP-LPGNIALVSQSGALGTAILDWAAARGIGFSHFVSLG----NEADvdFADLLDYLADDPDT 209
|
|
| PRK06091 |
PRK06091 |
membrane protein FdrA; Validated |
89-249 |
3.10e-07 |
|
membrane protein FdrA; Validated
Pssm-ID: 180395 [Multi-domain] Cd Length: 555 Bit Score: 51.97 E-value: 3.10e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255958286 89 GKGGQKHLGLPVFNTVKEAKEKT-GATASVIYVPPPFAAAAINEAIDAEIPlVVCITEGIPQQDMVRVKHRLTRQGTTrL 167
Cdd:PRK06091 93 AQGSGSSQSLTQVRRWDSACQKLpDANLALISVAGEYAAELAEQALDRNLN-VMMFSDNVTLEDEIRLKTRAREKGLL-V 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255958286 168 IGPNCpgvinpGECKIGIMP---GHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCIGIGGDPFN----GTDFIDCL 240
Cdd:PRK06091 171 MGPDC------GTAMIAGTPlafANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSaevgGISALTAL 244
|
....*....
gi 255958286 241 EVFLNDPAT 249
Cdd:PRK06091 245 EMLSADEKS 253
|
|
| Succ_CoA_lig |
pfam13607 |
Succinyl-CoA ligase like flavodoxin domain; This domain contains the catalytic domain from ... |
193-299 |
3.55e-06 |
|
Succinyl-CoA ligase like flavodoxin domain; This domain contains the catalytic domain from Succinyl-CoA ligase alpha subunit and other related enzymes. A conserved histidine is involved in phosphoryl transfer.
Pssm-ID: 433345 [Multi-domain] Cd Length: 138 Bit Score: 45.92 E-value: 3.55e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255958286 193 KGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCIGIGgdpfNGTD--FIDCLEVFLNDPATegiiliGEIGGHAEE--NAAA 268
Cdd:pfam13607 1 PGNIALVSQSGALGAALLDWARSRGIGFSKFVSLG----NEADvdFADLLEYLADDPET------RVILLYLEGirDGRR 70
|
90 100 110
....*....|....*....|....*....|.
gi 255958286 269 FLKEHNSGPKAKPVVSFIAGITaPPGRRMGH 299
Cdd:pfam13607 71 FLRAARRAARRKPVVVLKAGRS-EAGARAAA 100
|
|
| CoA_binding_2 |
pfam13380 |
CoA binding domain; This domain has a Rossmann fold and is found in a number of proteins ... |
96-178 |
1.51e-04 |
|
CoA binding domain; This domain has a Rossmann fold and is found in a number of proteins including succinyl CoA synthetases, malate and ATP-citrate ligases.
Pssm-ID: 433162 [Multi-domain] Cd Length: 116 Bit Score: 40.60 E-value: 1.51e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255958286 96 LGLPVFNTVKEAKEKtgATASVIYVPPPFAAAAINEAIDAEIPLVVCITeGIPQQDMVRvkhrLTRQGTTRLIGPNCPGV 175
Cdd:pfam13380 41 LGEPVYPSLADPPEP--VDLVDVFRPPEAVPEIVEEALALGAKAVWLQP-GIENEEAAA----IARAAGIRVVGDRCLGV 113
|
...
gi 255958286 176 INP 178
Cdd:pfam13380 114 EHP 116
|
|
| |
