|
Name |
Accession |
Description |
Interval |
E-value |
| TIR |
smart00255 |
Toll - interleukin 1 - resistance; |
672-813 |
3.16e-33 |
|
Toll - interleukin 1 - resistance;
Pssm-ID: 214587 [Multi-domain] Cd Length: 140 Bit Score: 124.74 E-value: 3.16e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10946594 672 YDAFVIYSSQneDWVRNELVKNLEEGVPRFHLCLHYRDFIPGVAIAANIIqEGFHKSRKVIVVVSRHFIQSRWCIFEYEI 751
Cdd:smart00255 2 YDVFISYSGK--EDVRNEFLSHLLEKLRGYGLCVFIDDFEPGGGDLEEID-EAIEKSRIAIVVLSPNYAESEWCLDELVA 78
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 10946594 752 AQTWQFLSSRSGIIFIVLEkVEKSLLRQQVELYRLLSRNTYLEWEDNPLGRhiFWRRLKNAL 813
Cdd:smart00255 79 ALENALEEGGLRVIPIFYE-VIPSDVRKQPGKFRKVFKKNYLKWPEDEKEQ--FWKKALYAV 137
|
|
| TIR |
pfam01582 |
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ... |
675-814 |
1.81e-29 |
|
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.
Pssm-ID: 396246 Cd Length: 165 Bit Score: 114.77 E-value: 1.81e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10946594 675 FVIYSS----QNEDWVRNELVKNLeeGVPRFHLCLHYRDFIPGVAIAANIiQEGFHKSRKVIVVVSRHFIQSRWCIFEYE 750
Cdd:pfam01582 1 YDVFLSfrgsDTREWFVSHLLKEL--KQKGIKLFIDDRDLEPGEAIAPEL-LSAIEKSRRSVVVLSPNYASSGWCLDELV 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10946594 751 IAQTWQfLSSRSGIIFIVLEKVEK-------SLLRQQVELYRLLSRNTYLEWE------------DNPLGRHIFWRRLKN 811
Cdd:pfam01582 78 KILECA-LDLGQKVIPIFYEVDPSdvrkqtgSFGKAFKKHKKVLTEEKVLKWRgalnevaniwhsKSVSDESKFWKKIAY 156
|
...
gi 10946594 812 ALL 814
Cdd:pfam01582 157 DIS 159
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
46-456 |
1.12e-10 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 65.25 E-value: 1.12e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10946594 46 KVPDDI---PSSTKNIDLSFNPLKilKSYSFSNFSELQWLDLSRceiETIEDKAWHGLHHLSNLI---LTGNPIQSFSPG 119
Cdd:PLN00113 108 PIPDDIfttSSSLRYLNLSNNNFT--GSIPRGSIPNLETLDLSN---NMLSGEIPNDIGSFSSLKvldLGGNVLVGKIPN 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10946594 120 SFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIhSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRE 199
Cdd:PLN00113 183 SLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNL-SGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKN 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10946594 200 NPQVNLSLDMSLNPIdfiQDQAFQGIKLHELTLRGNFNSSNI--MKTCLQNLAGLHVhrlilgeFKDErnleiFEPSIME 277
Cdd:PLN00113 262 LQYLFLYQNKLSGPI---PPSIFSLQKLISLDLSDNSLSGEIpeLVIQLQNLEILHL-------FSNN-----FTGKIPV 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10946594 278 GLCDVTIDEFRLTYTNDFSDDIVK-------FHCLaNVSAMSLAGVSIKYLEDVPKHFKW------------------QS 332
Cdd:PLN00113 327 ALTSLPRLQVLQLWSNKFSGEIPKnlgkhnnLTVL-DLSTNNLTGEIPEGLCSSGNLFKLilfsnslegeipkslgacRS 405
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10946594 333 LSIIRCQLKQFPT------LDLPFLKSLTLTMNK--GSISFKKVALPSLSYLDLSRNalSFSGCCSYSdLGTNSLRHLDL 404
Cdd:PLN00113 406 LRRVRLQDNSFSGelpsefTKLPLVYFLDISNNNlqGRINSRKWDMPSLQMLSLARN--KFFGGLPDS-FGSKRLENLDL 482
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 10946594 405 S---FNGAIIMSanFMGLEELQHLDFQHSTLKRV--TEFSaflSLEKLLYLDISYTN 456
Cdd:PLN00113 483 SrnqFSGAVPRK--LGSLSELMQLKLSENKLSGEipDELS---SCKKLVSLDLSHNQ 534
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
53-113 |
3.15e-07 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 47.90 E-value: 3.15e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 10946594 53 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPI 113
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
369-555 |
3.24e-07 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 53.13 E-value: 3.24e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10946594 369 ALPSLSYLDLSRNALSFSGCCSYSDLGTN-SLRHLDLSFNGaiimsanfmglEELQHLDFQHSTLKRVTEfsaflSLEKL 447
Cdd:cd00116 79 KGCGLQELDLSDNALGPDGCGVLESLLRSsSLQELKLNNNG-----------LGDRGLRLLAKGLKDLPP-----ALEKL 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10946594 448 LYLDISYTNTK-IDFDGIFLGLTSLNTLKMAGNSFKDN---TLSNVFANTTNLTFLDLSKCQLE-----QISwGVFDTLH 518
Cdd:cd00116 143 VLGRNRLEGAScEALAKALRANRDLKELNLANNGIGDAgirALAEGLKANCNLEVLDLNNNGLTdegasALA-ETLASLK 221
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 10946594 519 RLQLLNMSHNNL-----LFLDSSHYNQLYSLSTLDCSFNRIE 555
Cdd:cd00116 222 SLEVLNLGDNNLtdagaAALASALLSPNISLLTLSLSCNDIT 263
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
342-547 |
5.70e-07 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 227223 [Multi-domain] Cd Length: 394 Bit Score: 52.66 E-value: 5.70e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10946594 342 QFPTLDLPFLKSLTLTMNKGS--ISFKKVALPSLSYLDLSRNALSFSgccsYSDLGT-NSLRHLDLSFNGAIIMSANFMG 418
Cdd:COG4886 109 ISELLELTNLTSLDLDNNNITdiPPLIGLLKSNLKELDLSDNKIESL----PSPLRNlPNLKNLDLSFNDLSDLPKLLSN 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10946594 419 LEELQHLDFQHSTLKRVTEFSAFLSleKLLYLDISYtNTKIDFDGIFLGLTSLNTLKMAGNSFKDntLSNVFANTTNLTF 498
Cdd:COG4886 185 LSNLNNLDLSGNKISDLPPEIELLS--ALEELDLSN-NSIIELLSSLSNLKNLSGLELSNNKLED--LPESIGNLSNLET 259
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 10946594 499 LDLSKCQLEQISwgVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTL 547
Cdd:COG4886 260 LDLSNNQISSIS--SLGSLTNLRELDLSGNSLSNALPLIALLLLLLELL 306
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
494-554 |
4.84e-05 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 41.74 E-value: 4.84e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 10946594 494 TNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRI 554
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
73-214 |
1.31e-03 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 40.92 E-value: 1.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10946594 73 FSNFSELQWLDLSRCEIETIEDkaWHGLHHLSNLILTGNPIQSFSpgsfsGLTSLENL---------VAVETKLASLESF 143
Cdd:cd21340 42 LEFLTNLTHLYLQNNQIEKIEN--LENLVNLKKLYLGGNRISVVE-----GLENLTNLeelhienqrLPPGEKLTFDPRS 114
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 10946594 144 PIGQLITLKKLNVAHNFIHScklPAYFSNLTNLVHVDLSYNYIQTI-----TVNDLQFLREnpqvnlsLDMSLNPI 214
Cdd:cd21340 115 LAALSNSLRVLNISGNNIDS---LEPLAPLRNLEQLDASNNQISDLeelldLLSSWPSLRE-------LDLTGNPV 180
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| TIR |
smart00255 |
Toll - interleukin 1 - resistance; |
672-813 |
3.16e-33 |
|
Toll - interleukin 1 - resistance;
Pssm-ID: 214587 [Multi-domain] Cd Length: 140 Bit Score: 124.74 E-value: 3.16e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10946594 672 YDAFVIYSSQneDWVRNELVKNLEEGVPRFHLCLHYRDFIPGVAIAANIIqEGFHKSRKVIVVVSRHFIQSRWCIFEYEI 751
Cdd:smart00255 2 YDVFISYSGK--EDVRNEFLSHLLEKLRGYGLCVFIDDFEPGGGDLEEID-EAIEKSRIAIVVLSPNYAESEWCLDELVA 78
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 10946594 752 AQTWQFLSSRSGIIFIVLEkVEKSLLRQQVELYRLLSRNTYLEWEDNPLGRhiFWRRLKNAL 813
Cdd:smart00255 79 ALENALEEGGLRVIPIFYE-VIPSDVRKQPGKFRKVFKKNYLKWPEDEKEQ--FWKKALYAV 137
|
|
| TIR |
pfam01582 |
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ... |
675-814 |
1.81e-29 |
|
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.
Pssm-ID: 396246 Cd Length: 165 Bit Score: 114.77 E-value: 1.81e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10946594 675 FVIYSS----QNEDWVRNELVKNLeeGVPRFHLCLHYRDFIPGVAIAANIiQEGFHKSRKVIVVVSRHFIQSRWCIFEYE 750
Cdd:pfam01582 1 YDVFLSfrgsDTREWFVSHLLKEL--KQKGIKLFIDDRDLEPGEAIAPEL-LSAIEKSRRSVVVLSPNYASSGWCLDELV 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10946594 751 IAQTWQfLSSRSGIIFIVLEKVEK-------SLLRQQVELYRLLSRNTYLEWE------------DNPLGRHIFWRRLKN 811
Cdd:pfam01582 78 KILECA-LDLGQKVIPIFYEVDPSdvrkqtgSFGKAFKKHKKVLTEEKVLKWRgalnevaniwhsKSVSDESKFWKKIAY 156
|
...
gi 10946594 812 ALL 814
Cdd:pfam01582 157 DIS 159
|
|
| TIR_2 |
pfam13676 |
TIR domain; This is a family of bacterial Toll-like receptors. |
675-770 |
5.98e-12 |
|
TIR domain; This is a family of bacterial Toll-like receptors.
Pssm-ID: 433398 Cd Length: 119 Bit Score: 63.12 E-value: 5.98e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10946594 675 FVIYSSQNEDWVRnELVKNLEE-GvprFHLCLHYRDFIPGVAIAANIiQEGFHKSRKVIVVVSRHFIQSRWCIFEYEIAQ 753
Cdd:pfam13676 2 FISYAGEDRAWAE-WLADALEAaG---YRVWLDRWDIRPGDDWVEEI-EEAIENSDRVLVVLSPAYLESPWCRAEWEAAL 76
|
90
....*....|....*..
gi 10946594 754 TwQFLSSRSGIIFIVLE 770
Cdd:pfam13676 77 A-ADPEGRKRLIPVRLE 92
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
46-456 |
1.12e-10 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 65.25 E-value: 1.12e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10946594 46 KVPDDI---PSSTKNIDLSFNPLKilKSYSFSNFSELQWLDLSRceiETIEDKAWHGLHHLSNLI---LTGNPIQSFSPG 119
Cdd:PLN00113 108 PIPDDIfttSSSLRYLNLSNNNFT--GSIPRGSIPNLETLDLSN---NMLSGEIPNDIGSFSSLKvldLGGNVLVGKIPN 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10946594 120 SFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIhSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRE 199
Cdd:PLN00113 183 SLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNL-SGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKN 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10946594 200 NPQVNLSLDMSLNPIdfiQDQAFQGIKLHELTLRGNFNSSNI--MKTCLQNLAGLHVhrlilgeFKDErnleiFEPSIME 277
Cdd:PLN00113 262 LQYLFLYQNKLSGPI---PPSIFSLQKLISLDLSDNSLSGEIpeLVIQLQNLEILHL-------FSNN-----FTGKIPV 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10946594 278 GLCDVTIDEFRLTYTNDFSDDIVK-------FHCLaNVSAMSLAGVSIKYLEDVPKHFKW------------------QS 332
Cdd:PLN00113 327 ALTSLPRLQVLQLWSNKFSGEIPKnlgkhnnLTVL-DLSTNNLTGEIPEGLCSSGNLFKLilfsnslegeipkslgacRS 405
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10946594 333 LSIIRCQLKQFPT------LDLPFLKSLTLTMNK--GSISFKKVALPSLSYLDLSRNalSFSGCCSYSdLGTNSLRHLDL 404
Cdd:PLN00113 406 LRRVRLQDNSFSGelpsefTKLPLVYFLDISNNNlqGRINSRKWDMPSLQMLSLARN--KFFGGLPDS-FGSKRLENLDL 482
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 10946594 405 S---FNGAIIMSanFMGLEELQHLDFQHSTLKRV--TEFSaflSLEKLLYLDISYTN 456
Cdd:PLN00113 483 SrnqFSGAVPRK--LGSLSELMQLKLSENKLSGEipDELS---SCKKLVSLDLSHNQ 534
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
53-113 |
3.15e-07 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 47.90 E-value: 3.15e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 10946594 53 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPI 113
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
369-555 |
3.24e-07 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 53.13 E-value: 3.24e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10946594 369 ALPSLSYLDLSRNALSFSGCCSYSDLGTN-SLRHLDLSFNGaiimsanfmglEELQHLDFQHSTLKRVTEfsaflSLEKL 447
Cdd:cd00116 79 KGCGLQELDLSDNALGPDGCGVLESLLRSsSLQELKLNNNG-----------LGDRGLRLLAKGLKDLPP-----ALEKL 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10946594 448 LYLDISYTNTK-IDFDGIFLGLTSLNTLKMAGNSFKDN---TLSNVFANTTNLTFLDLSKCQLE-----QISwGVFDTLH 518
Cdd:cd00116 143 VLGRNRLEGAScEALAKALRANRDLKELNLANNGIGDAgirALAEGLKANCNLEVLDLNNNGLTdegasALA-ETLASLK 221
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 10946594 519 RLQLLNMSHNNL-----LFLDSSHYNQLYSLSTLDCSFNRIE 555
Cdd:cd00116 222 SLEVLNLGDNNLtdagaAALASALLSPNISLLTLSLSCNDIT 263
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
342-547 |
5.70e-07 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 227223 [Multi-domain] Cd Length: 394 Bit Score: 52.66 E-value: 5.70e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10946594 342 QFPTLDLPFLKSLTLTMNKGS--ISFKKVALPSLSYLDLSRNALSFSgccsYSDLGT-NSLRHLDLSFNGAIIMSANFMG 418
Cdd:COG4886 109 ISELLELTNLTSLDLDNNNITdiPPLIGLLKSNLKELDLSDNKIESL----PSPLRNlPNLKNLDLSFNDLSDLPKLLSN 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10946594 419 LEELQHLDFQHSTLKRVTEFSAFLSleKLLYLDISYtNTKIDFDGIFLGLTSLNTLKMAGNSFKDntLSNVFANTTNLTF 498
Cdd:COG4886 185 LSNLNNLDLSGNKISDLPPEIELLS--ALEELDLSN-NSIIELLSSLSNLKNLSGLELSNNKLED--LPESIGNLSNLET 259
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 10946594 499 LDLSKCQLEQISwgVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTL 547
Cdd:COG4886 260 LDLSNNQISSIS--SLGSLTNLRELDLSGNSLSNALPLIALLLLLLELL 306
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
77-130 |
1.22e-06 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 46.36 E-value: 1.22e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 10946594 77 SELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENL 130
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYL 54
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
41-296 |
2.09e-06 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 227223 [Multi-domain] Cd Length: 394 Bit Score: 50.74 E-value: 2.09e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10946594 41 DQKLSKVPDDI--PSSTKNIDLSFNPLKILkSYSFSNFSELQWLDLSRCEIETIEDKAWHgLHHLSNLILTGNPIQSFsP 118
Cdd:COG4886 149 DNKIESLPSPLrnLPNLKNLDLSFNDLSDL-PKLLSNLSNLNNLDLSGNKISDLPPEIEL-LSALEELDLSNNSIIEL-L 225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10946594 119 GSFSGLTSLENLVAVETKLASLESfPIGQLITLKKLNVAHNFIHScklPAYFSNLTNLVHVDLSYNyiqtitvndlQFLR 198
Cdd:COG4886 226 SSLSNLKNLSGLELSNNKLEDLPE-SIGNLSNLETLDLSNNQISS---ISSLGSLTNLRELDLSGN----------SLSN 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10946594 199 ENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLrGNFNSSNIMKTCLQNLAGLHVHRLI--LGEFKDERNLEIFEPSIM 276
Cdd:COG4886 292 ALPLIALLLLLLELLLNLLLTLKALELKLNSILL-NNNILSNGETSSPEALSILESLNNLwtLDNALDESNLNRYIVKNP 370
|
250 260
....*....|....*....|..
gi 10946594 277 E--GLCDVTIDEFRLTYTNDFS 296
Cdd:COG4886 371 NaiGSLLDLVKKHVNQLLEKVN 392
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
41-214 |
3.67e-05 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 227223 [Multi-domain] Cd Length: 394 Bit Score: 46.88 E-value: 3.67e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10946594 41 DQKLSKVPDDIPSSTKNIDLSFNPLKILK-SYSFSNFSELQWLDLSRCEIeTIEDKAWHGLHHLSNLILTGNPIQSFSPG 119
Cdd:COG4886 56 SNTLLLLPSSLSRLLSLDLLSPSGISSLDgSENLLNLLPLPSLDLNLNRL-RSNISELLELTNLTSLDLDNNNITDIPPL 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10946594 120 SFSGLTSLENLVAVETKLASLESfPIGQLITLKKLNVAHNfiHSCKLPAYFSNLTNLVHVDLSYNYIQTITVndlqfLRE 199
Cdd:COG4886 135 IGLLKSNLKELDLSDNKIESLPS-PLRNLPNLKNLDLSFN--DLSDLPKLLSNLSNLNNLDLSGNKISDLPP-----EIE 206
|
170
....*....|....*
gi 10946594 200 NPQVNLSLDMSLNPI 214
Cdd:COG4886 207 LLSALEELDLSNNSI 221
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
494-554 |
4.84e-05 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 41.74 E-value: 4.84e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 10946594 494 TNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRI 554
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
97-168 |
8.03e-05 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 46.35 E-value: 8.03e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 10946594 97 WHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIhSCKLPA 168
Cdd:PLN03150 438 ISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSL-SGRVPA 508
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
490-530 |
9.42e-04 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 37.89 E-value: 9.42e-04
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 10946594 490 FANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNL 530
Cdd:pfam13855 21 FKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
73-214 |
1.31e-03 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 40.92 E-value: 1.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10946594 73 FSNFSELQWLDLSRCEIETIEDkaWHGLHHLSNLILTGNPIQSFSpgsfsGLTSLENL---------VAVETKLASLESF 143
Cdd:cd21340 42 LEFLTNLTHLYLQNNQIEKIEN--LENLVNLKKLYLGGNRISVVE-----GLENLTNLeelhienqrLPPGEKLTFDPRS 114
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 10946594 144 PIGQLITLKKLNVAHNFIHScklPAYFSNLTNLVHVDLSYNYIQTI-----TVNDLQFLREnpqvnlsLDMSLNPI 214
Cdd:cd21340 115 LAALSNSLRVLNISGNNIDS---LEPLAPLRNLEQLDASNNQISDLeelldLLSSWPSLRE-------LDLTGNPV 180
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
47-162 |
1.57e-03 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 42.14 E-value: 1.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10946594 47 VPDDIPSST-KNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLT 125
Cdd:PLN00113 468 LPDSFGSKRlENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMP 547
|
90 100 110
....*....|....*....|....*....|....*..
gi 10946594 126 SLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIH 162
Cdd:PLN00113 548 VLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLH 584
|
|
| YjbI |
COG1357 |
Uncharacterized protein YjbI, contains pentapeptide repeats [Function unknown]; |
392-509 |
4.03e-03 |
|
Uncharacterized protein YjbI, contains pentapeptide repeats [Function unknown];
Pssm-ID: 224276 [Multi-domain] Cd Length: 238 Bit Score: 39.86 E-value: 4.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10946594 392 SDLGTNSLRHLDLSFNGAIIMSANFMGLEeLQHLDFQHSTLKRV--TEFSAF---------LSLEKLLYLDISYTNTKID 460
Cdd:COG1357 32 ADLQGSELQLGDLNFENANLSGLDLSGAN-LSGADLSNANLRGAdlSKGADLsgadleganLRGANLSGANLSGANLSNA 110
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 10946594 461 FDGIFLGlTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQI 509
Cdd:COG1357 111 TRANLSG-ADLSGANLSNANLTGANLSGANLNGANLSNANLSGADLSGA 158
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
150-214 |
4.60e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 35.96 E-value: 4.60e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 10946594 150 TLKKLNVAHNFIHSCKlPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRenpqvNL-SLDMSLNPI 214
Cdd:pfam13855 2 NLRSLDLSNNRLTSLD-DGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLP-----SLrYLDLSGNRL 61
|
|
| YjbI |
COG1357 |
Uncharacterized protein YjbI, contains pentapeptide repeats [Function unknown]; |
329-512 |
5.38e-03 |
|
Uncharacterized protein YjbI, contains pentapeptide repeats [Function unknown];
Pssm-ID: 224276 [Multi-domain] Cd Length: 238 Bit Score: 39.47 E-value: 5.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10946594 329 KWQSLSIIRCQLKQFPTLDLPFLKSltltmNKGSISFKKVALPSLSY--LDLSRNALS---FSGC--CSYSDLGTNSLRH 401
Cdd:COG1357 15 ESSRLQGIRELKANLLGADLQGSEL-----QLGDLNFENANLSGLDLsgANLSGADLSnanLRGAdlSKGADLSGADLEG 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10946594 402 LDLS---FNGAIIMSANFMGLEE--LQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTN------TKIDFDGIFLGLTS 470
Cdd:COG1357 90 ANLRganLSGANLSGANLSNATRanLSGADLSGANLSNANLTGANLSGANLNGANLSNANlsgadlSGADLSGADLSGAN 169
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 10946594 471 -----LNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWG 512
Cdd:COG1357 170 lsgadLRGANLSGANLSGADLRNANLSGADLSGADLTGANLVNANLG 216
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
422-554 |
8.65e-03 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 38.61 E-value: 8.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 10946594 422 LQHLDFQHSTLKRVTEFSAFLSLEKLlYLDisytNTKI----DFDGiflgLTSLNTLKMAGNS--------FKDNTLSNV 489
Cdd:cd21340 48 LTHLYLQNNQIEKIENLENLVNLKKL-YLG----GNRIsvveGLEN----LTNLEELHIENQRlppgekltFDPRSLAAL 118
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 10946594 490 fANTtnLTFLDLSKCQLEQISWgvFDTLHRLQLLNMSHNNLLFLD--SSHYNQLYSLSTLDCSFNRI 554
Cdd:cd21340 119 -SNS--LRVLNISGNNIDSLEP--LAPLRNLEQLDASNNQISDLEelLDLLSSWPSLRELDLTGNPV 180
|
|
|