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Conserved domains on  [gi|254911108|ref|NP_081689|]
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leucine-rich repeat-containing protein 28 isoform 2 [Mus musculus]

Protein Classification

leucine-rich repeat domain-containing protein( domain architecture ID 11469232)

leucine-rich repeat (LRR) domain-containing protein may participate in protein-protein interactions

Gene Ontology:  GO:0005515
PubMed:  11751054|7583641|14747988

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
5-132 6.80e-19

Leucine-rich repeat (LRR) protein [Transcription];


:

Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 81.90  E-value: 6.80e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254911108   5 ICKTISVARLEKHKNLFLNYRNLHHFPLELlkdEGLQHLERLYMKRNSLTTLPENLAQkLPNLVELYLHSNNIVVVPEAI 84
Cdd:COG4886  103 LSGNEELSNLTNLESLDLSGNQLTDLPEEL---ANLTNLKELDLSNNQLTDLPEPLGN-LTNLKSLDLSNNQLTDLPEEL 178

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 254911108  85 GSLVKLQCLDLSDNALEIVCPEIGGLRALRHLRLANNQLQFLPPDFGS 132
Cdd:COG4886  179 GNLTNLKELDLSNNQITDLPEPLGNLTNLEELDLSGNQLTDLPEPLAN 226
 
Name Accession Description Interval E-value
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
5-132 6.80e-19

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 81.90  E-value: 6.80e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254911108   5 ICKTISVARLEKHKNLFLNYRNLHHFPLELlkdEGLQHLERLYMKRNSLTTLPENLAQkLPNLVELYLHSNNIVVVPEAI 84
Cdd:COG4886  103 LSGNEELSNLTNLESLDLSGNQLTDLPEEL---ANLTNLKELDLSNNQLTDLPEPLGN-LTNLKSLDLSNNQLTDLPEEL 178

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 254911108  85 GSLVKLQCLDLSDNALEIVCPEIGGLRALRHLRLANNQLQFLPPDFGS 132
Cdd:COG4886  179 GNLTNLKELDLSNNQITDLPEPLGNLTNLEELDLSGNQLTDLPEPLAN 226
PRK15370 PRK15370
type III secretion system effector E3 ubiquitin transferase SlrP;
11-143 1.23e-07

type III secretion system effector E3 ubiquitin transferase SlrP;


Pssm-ID: 185268 [Multi-domain]  Cd Length: 754  Bit Score: 49.70  E-value: 1.23e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254911108  11 VARLEKHKNLFLNYRNLHHFPLELLKDEGLQHLERLYMKRNSLTTLPENLAQklpNLVELYLHSNNIVVVPEAIGslVKL 90
Cdd:PRK15370 253 ITELPERLPSALQSLDLFHNKISCLPENLPEELRYLSVYDNSIRTLPAHLPS---GITHLNVQSNSLTALPETLP--PGL 327

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 254911108  91 QCLDLSDNAL----EIVCPEigglraLRHLRLANNQLQFLPpdfgsETLSTFLTHED 143
Cdd:PRK15370 328 KTLEAGENALtslpASLPPE------LQVLDVSKNQITVLP-----ETLPPTITTLD 373
LRR_8 pfam13855
Leucine rich repeat;
65-123 1.39e-07

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 45.98  E-value: 1.39e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 254911108   65 PNLVELYLHSNNIVVV-PEAIGSLVKLQCLDLSDNALEIVCPE-IGGLRALRHLRLANNQL 123
Cdd:pfam13855   1 PNLRSLDLSNNRLTSLdDGAFKGLSNLKVLDLSNNLLTTLSPGaFSGLPSLRYLDLSGNRL 61
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
 38-124 4.26e-07

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 47.47  E-value: 4.26e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254911108  38 EGLQHLERLYMKRNSLTTLpENLaQKLPNLVELYLHSNNIVVV----------------------------PEAIGSLVK 89
Cdd:cd21340   43 EFLTNLTHLYLQNNQIEKI-ENL-ENLVNLKKLYLGGNRISVVeglenltnleelhienqrlppgekltfdPRSLAALSN 120

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 254911108  90 -LQCLDLSDNALEIVCPeIGGLRALRHLRLANNQLQ 124
Cdd:cd21340  121 sLRVLNISGNNIDSLEP-LAPLRNLEQLDASNNQIS 155
 
Name Accession Description Interval E-value
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
5-132 6.80e-19

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 81.90  E-value: 6.80e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254911108   5 ICKTISVARLEKHKNLFLNYRNLHHFPLELlkdEGLQHLERLYMKRNSLTTLPENLAQkLPNLVELYLHSNNIVVVPEAI 84
Cdd:COG4886  103 LSGNEELSNLTNLESLDLSGNQLTDLPEEL---ANLTNLKELDLSNNQLTDLPEPLGN-LTNLKSLDLSNNQLTDLPEEL 178

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 254911108  85 GSLVKLQCLDLSDNALEIVCPEIGGLRALRHLRLANNQLQFLPPDFGS 132
Cdd:COG4886  179 GNLTNLKELDLSNNQITDLPEPLGNLTNLEELDLSGNQLTDLPEPLAN 226
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
10-127 4.75e-18

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 79.59  E-value: 4.75e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254911108  10 SVARLEKHKNLFLNYRNLHHFPLELlkdEGLQHLERLYMKRNSLTTLPENLAQkLPNLVELYLHSNNIVVVPEAIGSLVK 89
Cdd:COG4886  131 ELANLTNLKELDLSNNQLTDLPEPL---GNLTNLKSLDLSNNQLTDLPEELGN-LTNLKELDLSNNQITDLPEPLGNLTN 206

                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 254911108  90 LQCLDLSDNALEIVCPEIGGLRALRHLRLANNQLQFLP 127
Cdd:COG4886  207 LEELDLSGNQLTDLPEPLANLTNLETLDLSNNQLTDLP 244
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
10-138 4.40e-16

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 73.81  E-value: 4.40e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254911108  10 SVARLEKHKNLFLNYRNLHHFPLELlkdEGLQHLERLYMKRNSLTTLPENLAQkLPNLVELYLHSNNIVVVPEAIGSLVK 89
Cdd:COG4886  154 PLGNLTNLKSLDLSNNQLTDLPEEL---GNLTNLKELDLSNNQITDLPEPLGN-LTNLEELDLSGNQLTDLPEPLANLTN 229

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 254911108  90 LQCLDLSDNALEIVcPEIGGLRALRHLRLANNQLQFLPPDFGSETLSTF 138
Cdd:COG4886  230 LETLDLSNNQLTDL-PELGNLTNLEELDLSNNQLTDLPPLANLTNLKTL 277
PRK15370 PRK15370
type III secretion system effector E3 ubiquitin transferase SlrP;
11-143 1.23e-07

type III secretion system effector E3 ubiquitin transferase SlrP;


Pssm-ID: 185268 [Multi-domain]  Cd Length: 754  Bit Score: 49.70  E-value: 1.23e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254911108  11 VARLEKHKNLFLNYRNLHHFPLELLKDEGLQHLERLYMKRNSLTTLPENLAQklpNLVELYLHSNNIVVVPEAIGslVKL 90
Cdd:PRK15370 253 ITELPERLPSALQSLDLFHNKISCLPENLPEELRYLSVYDNSIRTLPAHLPS---GITHLNVQSNSLTALPETLP--PGL 327

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 254911108  91 QCLDLSDNAL----EIVCPEigglraLRHLRLANNQLQFLPpdfgsETLSTFLTHED 143
Cdd:PRK15370 328 KTLEAGENALtslpASLPPE------LQVLDVSKNQITVLP-----ETLPPTITTLD 373
LRR_8 pfam13855
Leucine rich repeat;
65-123 1.39e-07

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 45.98  E-value: 1.39e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 254911108   65 PNLVELYLHSNNIVVV-PEAIGSLVKLQCLDLSDNALEIVCPE-IGGLRALRHLRLANNQL 123
Cdd:pfam13855   1 PNLRSLDLSNNRLTSLdDGAFKGLSNLKVLDLSNNLLTTLSPGaFSGLPSLRYLDLSGNRL 61
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
 38-124 4.26e-07

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 47.47  E-value: 4.26e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254911108  38 EGLQHLERLYMKRNSLTTLpENLaQKLPNLVELYLHSNNIVVV----------------------------PEAIGSLVK 89
Cdd:cd21340   43 EFLTNLTHLYLQNNQIEKI-ENL-ENLVNLKKLYLGGNRISVVeglenltnleelhienqrlppgekltfdPRSLAALSN 120

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 254911108  90 -LQCLDLSDNALEIVCPeIGGLRALRHLRLANNQLQ 124
Cdd:cd21340  121 sLRVLNISGNNIDSLEP-LAPLRNLEQLDASNNQIS 155
PRK15370 PRK15370
type III secretion system effector E3 ubiquitin transferase SlrP;
41-153 4.55e-07

type III secretion system effector E3 ubiquitin transferase SlrP;


Pssm-ID: 185268 [Multi-domain]  Cd Length: 754  Bit Score: 48.15  E-value: 4.55e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254911108  41 QHLERLYMKRNSLTTLPENLAQklpNLVELYLHSNNIVVVPEAIGSLVklQCLDLSDNALeIVCPEiGGLRALRHLRLAN 120
Cdd:PRK15370 199 EQITTLILDNNELKSLPENLQG---NIKTLYANSNQLTSIPATLPDTI--QEMELSINRI-TELPE-RLPSALQSLDLFH 271

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 254911108 121 NQLQFLP---PDfGSETLSTFltheDDMATSVPLHV 153
Cdd:PRK15370 272 NKISCLPenlPE-ELRYLSVY----DNSIRTLPAHL 302
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
10-144 1.17e-06

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 46.85  E-value: 1.17e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254911108  10 SVARLEKHKNLFLNYRNLHHFPLELlkdEGLQHLERLYMKRNSLTTLPEnLAQkLPNLVELYLHSNNIVVVPEaIGSLVK 89
Cdd:COG4886  200 PLGNLTNLEELDLSGNQLTDLPEPL---ANLTNLETLDLSNNQLTDLPE-LGN-LTNLEELDLSNNQLTDLPP-LANLTN 273

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 254911108  90 LQCLDLSDNALEIVCPEIGGLRALRHLRLANNQLQFLPPDFGSETLSTFLTHEDD 144
Cdd:COG4886  274 LKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLL 328
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 12-123 5.22e-06

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 45.22  E-value: 5.22e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254911108  12 ARLEKHKNL---FLNYRNLH-HFPLELLKDEGLQHLERLYmkrNSLT-TLPENLAQkLPNLVELYLHSNNIV-VVPEAIG 85
Cdd:PLN00113 206 RELGQMKSLkwiYLGYNNLSgEIPYEIGGLTSLNHLDLVY---NNLTgPIPSSLGN-LKNLQYLFLYQNKLSgPIPPSIF 281

                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 254911108  86 SLVKLQCLDLSDNALEIVCPE-IGGLRALRHLRLANNQL 123
Cdd:PLN00113 282 SLQKLISLDLSDNSLSGEIPElVIQLQNLEILHLFSNNF 320
LRR_8 pfam13855
Leucine rich repeat;
41-100 8.72e-06

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 40.97  E-value: 8.72e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 254911108   41 QHLERLYMKRNSLTTLPENLAQKLPNLVELYLHSNNIVVV-PEAIGSLVKLQCLDLSDNAL 100
Cdd:pfam13855   1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLsPGAFSGLPSLRYLDLSGNRL 61
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
 38-121 2.06e-05

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 42.85  E-value: 2.06e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254911108  38 EGLQHLERLYMKRNSLTTLpENLaQKLPNLVELYLH-----------------------------SNNIVVVPEAIGSLV 88
Cdd:cd21340   65 ENLVNLKKLYLGGNRISVV-EGL-ENLTNLEELHIEnqrlppgekltfdprslaalsnslrvlniSGNNIDSLEPLAPLR 142

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 254911108  89 KLQCLDLSDNAL---EIVCPEIGGLRALRHLRLANN 121
Cdd:cd21340  143 NLEQLDASNNQIsdlEELLDLLSSWPSLRELDLTGN 178
LRR_8 pfam13855
Leucine rich repeat;
18-77 2.09e-05

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 40.20  E-value: 2.09e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 254911108   18 KNLFLNYRNLHHFPLELLKdeGLQHLERLYMKRNSLTTLPENLAQKLPNLVELYLHSNNI 77
Cdd:pfam13855   4 RSLDLSNNRLTSLDDGAFK--GLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
 46-126 6.59e-05

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 41.31  E-value: 6.59e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254911108  46 LYMKRNSLTTLpENLAQkLPNLVELYLHSNNIVVVpEAIGSLVKLQCLDLSDNALEivcpEIGGLRALRHLR---LANNQ 122
Cdd:cd21340    7 LYLNDKNITKI-DNLSL-CKNLKVLYLYDNKITKI-ENLEFLTNLTHLYLQNNQIE----KIENLENLVNLKklyLGGNR 79


                 ....
gi 254911108 123 LQFL 126
Cdd:cd21340   80 ISVV 83
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 40-139 6.90e-04

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 38.68  E-value: 6.90e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254911108  40 LQHLERLYMKRNSLT-TLPENLAQkLPNLVELYLHSNNIV-VVPEAIGSLVKLQCLDLSDNAL-----EIVC-------- 104
Cdd:PLN00113 307 LQNLEILHLFSNNFTgKIPVALTS-LPRLQVLQLWSNKFSgEIPKNLGKHNNLTVLDLSTNNLtgeipEGLCssgnlfkl 385

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 254911108 105 ------------PEIGGLRALRHLRLANNQLQF-LPPDFGSETLSTFL 139
Cdd:PLN00113 386 ilfsnslegeipKSLGACRSLRRVRLQDNSFSGeLPSEFTKLPLVYFL 433
LRR_9 pfam14580
Leucine-rich repeat;
33-98 1.23e-03

Leucine-rich repeat;


Pssm-ID: 405295 [Multi-domain]  Cd Length: 175  Bit Score: 37.44  E-value: 1.23e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 254911108   33 ELLKDEGLQHLER---LYMKRNSLTTLPENLAQKLPNLVELYLHSNNI--VVVPEAIGSLVKLQCLDLSDN 98
Cdd:pfam14580  53 EIRKLDGFPLLRRlktLLLNNNRICRIGEGLGEALPNLTELILTNNNLqeLGDLDPLASLKKLTFLSLLRN 123
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 39-129 1.64e-03

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 37.91  E-value: 1.64e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254911108  39 GLQHLERLYMKRNSLT-TLPENLAQkLPNLVELYLHSNNIV-VVPEAIGSLVKLQCLDLSDNALEIVCP-EIGGLRALRH 115
Cdd:PLN00113 282 SLQKLISLDLSDNSLSgEIPELVIQ-LQNLEILHLFSNNFTgKIPVALTSLPRLQVLQLWSNKFSGEIPkNLGKHNNLTV 360

                         90
                 ....*....|....
gi 254911108 116 LRLANNQLQFLPPD 129
Cdd:PLN00113 361 LDLSTNNLTGEIPE 374
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 39-133 2.18e-03

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 37.52  E-value: 2.18e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254911108  39 GLQHLERLYMKRNSLTTLPENLAQKLPNLVELYLHSNNIV-VVPEAIGSLVKLQCLDLSDNALEIVCP-EIGGLRALRHL 116
Cdd:PLN00113 473 GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSgEIPDELSSCKKLVSLDLSHNQLSGQIPaSFSEMPVLSQL 552

                         90
                 ....*....|....*...
gi 254911108 117 RLANNQLQF-LPPDFGSE 133
Cdd:PLN00113 553 DLSQNQLSGeIPKNLGNV 570
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 64-123 3.24e-03

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 36.75  E-value: 3.24e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 254911108  64 LPNLVELYLhSNNIVV--VPEAIGSLVKLQCLDLSDNALE-IVCPEIGGLRALRHLRLANNQL 123
Cdd:PLN00113 139 IPNLETLDL-SNNMLSgeIPNDIGSFSSLKVLDLGGNVLVgKIPNSLTNLTSLEFLTLASNQL 200
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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