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Conserved domains on  [gi|254675124|ref|NP_082248|]
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cilia- and flagella-associated protein 45 [Mus musculus]

Protein Classification

trichohyalin-plectin-homology domain domain-containing protein( domain architecture ID 12159040)

trichohyalin-plectin-homology domain (TPH) domain-containing protein similar to meiosis-specific nuclear structural protein 1, trichoplein keratin filament-binding protein, and cilia- and flagella-associated proteins

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
TPH pfam13868
Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of ...
184-524 1.89e-65

Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of eukaryotic proteins. Trichoplein or mitostatin, was first defined as a meiosis-specific nuclear structural protein. It has since been linked with mitochondrial movement. It is associated with the mitochondrial outer membrane, and over-expression leads to reduction in mitochondrial motility whereas lack of it enhances mitochondrial movement. The activity appears to be mediated through binding the mitochondria to the actin intermediate filaments (IFs). The family is in the trichohyalin-plectin-homology domain.


:

Pssm-ID: 464007 [Multi-domain]  Cd Length: 341  Bit Score: 216.32  E-value: 1.89e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  184 RMEQEEELKDMSKIILNAKCHAIRDAQILEKQQIQKELDEEERRLDHMMEIDRRESLQRQEDRERKRREERVRGKRHIVE 263
Cdd:pfam13868   1 LRENSDELRELNSKLLAAKCNKERDAQIAEKKRIKAEEKEEERRLDEMMEEERERALEEEEEKEEERKEERKRYRQELEE 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  264 QIKKNEEERSLQAEHREQEKEQMLAYLDRLQEEDLQDLERRHQEKLKMQAEIKRINDENQRQKAEMLAQERLADQMVMEF 343
Cdd:pfam13868  81 QIEEREQKRQEEYEEKLQEREQMDEIVERIQEEDQAEAEEKLEKQRQLREEIDEFNEEQAEWKELEKEEEREEDERILEY 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  344 TKKKMAREAEYEAEQEKIRREKEKEIARLRALQEKAQDYQAEQDALRAKRNQEVADREWRRKEKENAQKKIETEEKLRKS 423
Cdd:pfam13868 161 LKEKAEREEEREAEREEIEEEKEREIARLRAQQEKAQDEKAERDELRAKLYQEEQERKERQKEREEAEKKARQRQELQQA 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  424 RLEQVAFKEHTLAVQVQRDRDEFERILRAQREQIEREKQEQEKKAKGCLQHANELRRQVRENQQKHVQNRLATFEEGRRL 503
Cdd:pfam13868 241 REEQIELKERRLAEEAEREEEEFERMLRKQAEDEEIEQEEAEKRRMKRLEHRRELEKQIEEREEQRAAEREEELEEGERL 320
                         330       340
                  ....*....|....*....|.
gi 254675124  504 KEEAEKRRERIEDIKKQKLEE 524
Cdd:pfam13868 321 REEEAERRERIEEERQKKLKE 341
 
Name Accession Description Interval E-value
TPH pfam13868
Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of ...
184-524 1.89e-65

Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of eukaryotic proteins. Trichoplein or mitostatin, was first defined as a meiosis-specific nuclear structural protein. It has since been linked with mitochondrial movement. It is associated with the mitochondrial outer membrane, and over-expression leads to reduction in mitochondrial motility whereas lack of it enhances mitochondrial movement. The activity appears to be mediated through binding the mitochondria to the actin intermediate filaments (IFs). The family is in the trichohyalin-plectin-homology domain.


Pssm-ID: 464007 [Multi-domain]  Cd Length: 341  Bit Score: 216.32  E-value: 1.89e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  184 RMEQEEELKDMSKIILNAKCHAIRDAQILEKQQIQKELDEEERRLDHMMEIDRRESLQRQEDRERKRREERVRGKRHIVE 263
Cdd:pfam13868   1 LRENSDELRELNSKLLAAKCNKERDAQIAEKKRIKAEEKEEERRLDEMMEEERERALEEEEEKEEERKEERKRYRQELEE 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  264 QIKKNEEERSLQAEHREQEKEQMLAYLDRLQEEDLQDLERRHQEKLKMQAEIKRINDENQRQKAEMLAQERLADQMVMEF 343
Cdd:pfam13868  81 QIEEREQKRQEEYEEKLQEREQMDEIVERIQEEDQAEAEEKLEKQRQLREEIDEFNEEQAEWKELEKEEEREEDERILEY 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  344 TKKKMAREAEYEAEQEKIRREKEKEIARLRALQEKAQDYQAEQDALRAKRNQEVADREWRRKEKENAQKKIETEEKLRKS 423
Cdd:pfam13868 161 LKEKAEREEEREAEREEIEEEKEREIARLRAQQEKAQDEKAERDELRAKLYQEEQERKERQKEREEAEKKARQRQELQQA 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  424 RLEQVAFKEHTLAVQVQRDRDEFERILRAQREQIEREKQEQEKKAKGCLQHANELRRQVRENQQKHVQNRLATFEEGRRL 503
Cdd:pfam13868 241 REEQIELKERRLAEEAEREEEEFERMLRKQAEDEEIEQEEAEKRRMKRLEHRRELEKQIEEREEQRAAEREEELEEGERL 320
                         330       340
                  ....*....|....*....|.
gi 254675124  504 KEEAEKRRERIEDIKKQKLEE 524
Cdd:pfam13868 321 REEEAERRERIEEERQKKLKE 341
PTZ00121 PTZ00121
MAEBL; Provisional
110-551 3.15e-10

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 63.24  E-value: 3.15e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  110 ERIKWASQVLTKEELNAREQALKKEKEGILEAVTIRKKIMKQKEMTWNNNKKLSDLEEVARERAQNLLQRADKLRMEQEE 189
Cdd:PTZ00121 1275 EEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEA 1354
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  190 ELKDMSKIILNAKCHAIRDAQILEKQQIQKELDEEERRLDHMMEIDRRESLQRQEDRERKRREERVRGKRHIVEQIKKNE 269
Cdd:PTZ00121 1355 AADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKAD 1434
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  270 EERSLQAEHREQEKEQMLAYLDRLQEEDLQDLE-RRHQEKLKMQAEIKRINDENQRQKAEMLAQERLADQMVMEFTKKKM 348
Cdd:PTZ00121 1435 EAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEeAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADE 1514
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  349 AREAEYEAEQEKIRREKEKEIARLRALQEKAQDYQAEQDALRAKRNQEVADREWRRKEKENAQKKIETEEKLRKSRLEQV 428
Cdd:PTZ00121 1515 AKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARI 1594
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  429 AFKEHTLAVQVQRDRDEFERILRAQREQIEREKQEQEKKAKGCLQH--------ANELRRQVRENQQKHVQNRLATFEEG 500
Cdd:PTZ00121 1595 EEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKkeaeekkkAEELKKAEEENKIKAAEEAKKAEEDK 1674
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....
gi 254675124  501 RR---LKEEAEKRRERIEDIKKQKLEELRATGLPEKYCIEVERKANILPATSVN 551
Cdd:PTZ00121 1675 KKaeeAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEEN 1728
Smc COG1196
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
270-524 4.42e-09

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 440809 [Multi-domain]  Cd Length: 983  Bit Score: 59.18  E-value: 4.42e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124 270 EERSLQAEHREQEKEQMLAYLDRLQEEDLQDLERRHQEKLKMQAEIKRINDENQRQKAEMLAQERLADQMVMEFTKKKMA 349
Cdd:COG1196  235 RELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRREL 314
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124 350 REAEYEAEQE--KIRREKEKEIARLRALQEKAQDYQAEQDALRAKRNQEVADREWRRKEKENAQKKIETEEKLRKSRLEQ 427
Cdd:COG1196  315 EERLEELEEElaELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRA 394
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124 428 VAFKEHTLAVQVQRDRDEFERILRAQREQIEREKQEQEKKAKgcLQHANELRRQVRENQQKHVQNRLATFEEGRRLKEEA 507
Cdd:COG1196  395 AAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEE--EEEEEEALEEAAEEEAELEEEEEALLELLAELLEEA 472
                        250
                 ....*....|....*..
gi 254675124 508 EKRRERIEDIKKQKLEE 524
Cdd:COG1196  473 ALLEAALAELLEELAEA 489
SMC_prok_B TIGR02168
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...
169-488 6.45e-05

chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]


Pssm-ID: 274008 [Multi-domain]  Cd Length: 1179  Bit Score: 45.82  E-value: 6.45e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124   169 ARERAQNLLQRADKLRmEQEEELKDMSkiilnAKCHAIRDAQI-LEKQQIQKELDEEERRLDHMMEIDRRESLQRQEDRE 247
Cdd:TIGR02168  665 SAKTNSSILERRREIE-ELEEKIEELE-----EKIAELEKALAeLRKELEELEEELEQLRKELEELSRQISALRKDLARL 738
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124   248 RKRREERVRGKRHIVEQIKKNEEERSLQAEHREQEKEQMLAYLDRLQ--EEDLQDLERRHQEKLKMQAEI-KRINDENQR 324
Cdd:TIGR02168  739 EAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEelEAQIEQLKEELKALREALDELrAELTLLNEE 818
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124   325 QKAEMLAQERLADQMVMeftKKKMAREAEYEAEQEKIRREK-EKEIARLRALQEKAQDYQAEQDALRAKRNQEVADREWR 403
Cdd:TIGR02168  819 AANLRERLESLERRIAA---TERRLEDLEEQIEELSEDIESlAAEIEELEELIEELESELEALLNERASLEEALALLRSE 895
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124   404 RKEKENAQKKIETEEKLRKSRLEQVAFKEHTLAVQVQRDRDEFERILRAQREQIEREKQEQEKKAKGCLQHANELRRQVR 483
Cdd:TIGR02168  896 LEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEEARRRLK 975

                   ....*
gi 254675124   484 ENQQK 488
Cdd:TIGR02168  976 RLENK 980
MARTX_Nterm NF012221
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model ...
173-388 1.38e-03

MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model describes the N-terminal 1900 amino acids of MARTX family multifunctional-autoprocessing repeats-in-toxin holotoxins, which contain both repeat regions that facilitate their entry into eukaryotic target cells, and multiple effector domains.


Pssm-ID: 467957 [Multi-domain]  Cd Length: 1848  Bit Score: 41.74  E-value: 1.38e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  173 AQNLLQ-----RADKLRMEQEE------------ELKDMSKIILNAKCHAIRDAQILEKQQIQKELDEEERRLDHMME-- 233
Cdd:NF012221 1557 AQNALAdkeraEADRQRLEQEKqqqlaaisgsqsQLESTDQNALETNGQAQRDAILEESRAVTKELTTLAQGLDALDSqa 1636
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  234 IDRRESLQRQedrerkrreervrgKRHIVEQIKKNEEERSLQAEHREQEKeqmLAYLDRLQEEDLQDLER--RHQEKLKM 311
Cdd:NF012221 1637 TYAGESGDQW--------------RNPFAGGLLDRVQEQLDDAKKISGKQ---LADAKQRHVDNQQKVKDavAKSEAGVA 1699
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 254675124  312 QAEIKRINDENQRQKAEMLAQERLADQMVMEFTKKKMAREAEYEAEQEKIRREKEKEIARLRALQEKAQDYQAEQDA 388
Cdd:NF012221 1700 QGEQNQANAEQDIDDAKADAEKRKDDALAKQNEAQQAESDANAAANDAQSRGEQDASAAENKANQAQADAKGAKQDE 1776
MARTX_Nterm NF012221
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model ...
260-442 1.41e-03

MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model describes the N-terminal 1900 amino acids of MARTX family multifunctional-autoprocessing repeats-in-toxin holotoxins, which contain both repeat regions that facilitate their entry into eukaryotic target cells, and multiple effector domains.


Pssm-ID: 467957 [Multi-domain]  Cd Length: 1848  Bit Score: 41.74  E-value: 1.41e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  260 HIVEQIKKNE-EERSLQAEHR--------EQEKEQMLAYLDRLQEE----DLQDLERRHQ-EKLKMQAEIKRINDE---- 321
Cdd:NF012221 1546 AVSKHAKQDDaAQNALADKERaeadrqrlEQEKQQQLAAISGSQSQlestDQNALETNGQaQRDAILEESRAVTKElttl 1625
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  322 --------NQRQKAEMLAQ---ERLAD------QMVMEFTKKKMAREAE-----YEAEQEKIRREKEKEIARLRALQEKA 379
Cdd:NF012221 1626 aqgldaldSQATYAGESGDqwrNPFAGglldrvQEQLDDAKKISGKQLAdakqrHVDNQQKVKDAVAKSEAGVAQGEQNQ 1705
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 254675124  380 QDYQAEQDALRAKRNQEVADREWRRKEKENAQKKIETEEKLRKSRLEQVAFKEHTLAVQVQRD 442
Cdd:NF012221 1706 ANAEQDIDDAKADAEKRKDDALAKQNEAQQAESDANAAANDAQSRGEQDASAAENKANQAQAD 1768
 
Name Accession Description Interval E-value
TPH pfam13868
Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of ...
184-524 1.89e-65

Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of eukaryotic proteins. Trichoplein or mitostatin, was first defined as a meiosis-specific nuclear structural protein. It has since been linked with mitochondrial movement. It is associated with the mitochondrial outer membrane, and over-expression leads to reduction in mitochondrial motility whereas lack of it enhances mitochondrial movement. The activity appears to be mediated through binding the mitochondria to the actin intermediate filaments (IFs). The family is in the trichohyalin-plectin-homology domain.


Pssm-ID: 464007 [Multi-domain]  Cd Length: 341  Bit Score: 216.32  E-value: 1.89e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  184 RMEQEEELKDMSKIILNAKCHAIRDAQILEKQQIQKELDEEERRLDHMMEIDRRESLQRQEDRERKRREERVRGKRHIVE 263
Cdd:pfam13868   1 LRENSDELRELNSKLLAAKCNKERDAQIAEKKRIKAEEKEEERRLDEMMEEERERALEEEEEKEEERKEERKRYRQELEE 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  264 QIKKNEEERSLQAEHREQEKEQMLAYLDRLQEEDLQDLERRHQEKLKMQAEIKRINDENQRQKAEMLAQERLADQMVMEF 343
Cdd:pfam13868  81 QIEEREQKRQEEYEEKLQEREQMDEIVERIQEEDQAEAEEKLEKQRQLREEIDEFNEEQAEWKELEKEEEREEDERILEY 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  344 TKKKMAREAEYEAEQEKIRREKEKEIARLRALQEKAQDYQAEQDALRAKRNQEVADREWRRKEKENAQKKIETEEKLRKS 423
Cdd:pfam13868 161 LKEKAEREEEREAEREEIEEEKEREIARLRAQQEKAQDEKAERDELRAKLYQEEQERKERQKEREEAEKKARQRQELQQA 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  424 RLEQVAFKEHTLAVQVQRDRDEFERILRAQREQIEREKQEQEKKAKGCLQHANELRRQVRENQQKHVQNRLATFEEGRRL 503
Cdd:pfam13868 241 REEQIELKERRLAEEAEREEEEFERMLRKQAEDEEIEQEEAEKRRMKRLEHRRELEKQIEEREEQRAAEREEELEEGERL 320
                         330       340
                  ....*....|....*....|.
gi 254675124  504 KEEAEKRRERIEDIKKQKLEE 524
Cdd:pfam13868 321 REEEAERRERIEEERQKKLKE 341
PTZ00121 PTZ00121
MAEBL; Provisional
110-551 3.15e-10

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 63.24  E-value: 3.15e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  110 ERIKWASQVLTKEELNAREQALKKEKEGILEAVTIRKKIMKQKEMTWNNNKKLSDLEEVARERAQNLLQRADKLRMEQEE 189
Cdd:PTZ00121 1275 EEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEA 1354
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  190 ELKDMSKIILNAKCHAIRDAQILEKQQIQKELDEEERRLDHMMEIDRRESLQRQEDRERKRREERVRGKRHIVEQIKKNE 269
Cdd:PTZ00121 1355 AADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKAD 1434
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  270 EERSLQAEHREQEKEQMLAYLDRLQEEDLQDLE-RRHQEKLKMQAEIKRINDENQRQKAEMLAQERLADQMVMEFTKKKM 348
Cdd:PTZ00121 1435 EAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEeAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADE 1514
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  349 AREAEYEAEQEKIRREKEKEIARLRALQEKAQDYQAEQDALRAKRNQEVADREWRRKEKENAQKKIETEEKLRKSRLEQV 428
Cdd:PTZ00121 1515 AKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARI 1594
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  429 AFKEHTLAVQVQRDRDEFERILRAQREQIEREKQEQEKKAKGCLQH--------ANELRRQVRENQQKHVQNRLATFEEG 500
Cdd:PTZ00121 1595 EEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKkeaeekkkAEELKKAEEENKIKAAEEAKKAEEDK 1674
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....
gi 254675124  501 RR---LKEEAEKRRERIEDIKKQKLEELRATGLPEKYCIEVERKANILPATSVN 551
Cdd:PTZ00121 1675 KKaeeAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEEN 1728
Smc COG1196
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
270-524 4.42e-09

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 440809 [Multi-domain]  Cd Length: 983  Bit Score: 59.18  E-value: 4.42e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124 270 EERSLQAEHREQEKEQMLAYLDRLQEEDLQDLERRHQEKLKMQAEIKRINDENQRQKAEMLAQERLADQMVMEFTKKKMA 349
Cdd:COG1196  235 RELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRREL 314
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124 350 REAEYEAEQE--KIRREKEKEIARLRALQEKAQDYQAEQDALRAKRNQEVADREWRRKEKENAQKKIETEEKLRKSRLEQ 427
Cdd:COG1196  315 EERLEELEEElaELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRA 394
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124 428 VAFKEHTLAVQVQRDRDEFERILRAQREQIEREKQEQEKKAKgcLQHANELRRQVRENQQKHVQNRLATFEEGRRLKEEA 507
Cdd:COG1196  395 AAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEE--EEEEEEALEEAAEEEAELEEEEEALLELLAELLEEA 472
                        250
                 ....*....|....*..
gi 254675124 508 EKRRERIEDIKKQKLEE 524
Cdd:COG1196  473 ALLEAALAELLEELAEA 489
Smc COG1196
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
207-517 6.08e-09

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 440809 [Multi-domain]  Cd Length: 983  Bit Score: 58.79  E-value: 6.08e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124 207 RDAQILEKQQIQKELDEEERRLDHMMEIDRRESLQRQEDRERKRREERVRGKRHIVEQIKKNEEERSLQaeHREQEKEQM 286
Cdd:COG1196  237 LEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIA--RLEERRREL 314
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124 287 LAYLDRLQEEDLQDLERRHQEKLKMQAEIKRINDENQRQKAEMLAQERLAdqmvmeftkkkmAREAEYEAEQEKIRREKE 366
Cdd:COG1196  315 EERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAE------------EALLEAEAELAEAEEELE 382
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124 367 KEIARLRALQEKAQDYQAEQDALRAKRNQEVADREWRRKEKENAQKKIETEEKLRKSRLEQVAFKEHTLAVQVQRDRDEF 446
Cdd:COG1196  383 ELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALL 462
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 254675124 447 ERILRAQREQIEREKQEQEKKAKgclqhanELRRQVRENQQKHVQNRLATFEEGRRLKEEAEKRRERIEDI 517
Cdd:COG1196  463 ELLAELLEEAALLEAALAELLEE-------LAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAV 526
PTZ00121 PTZ00121
MAEBL; Provisional
110-519 6.83e-09

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 59.00  E-value: 6.83e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  110 ERIKWASQVLTKEELNAREQALKKEKEGILEAVTIRKKIMKQKemtwnnnkKLSDLEEVARE--RAQNLLQRADKLRMEQ 187
Cdd:PTZ00121 1402 EDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAK--------KADEAKKKAEEakKAEEAKKKAEEAKKAD 1473
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  188 E-----EELKDMSKIILNAKcHAIRDAQILEKQQIQKELDEEERRLDHMMEIDRRESLQRQEDRERKRREERVRGKRHI- 261
Cdd:PTZ00121 1474 EakkkaEEAKKADEAKKKAE-EAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELk 1552
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  262 -VEQIKKNEEERSLQAEHREQEKEQMLA----YLDRLQEEDLQDLERRHQEKLKMQAEIKRiNDENQRQKAEMLAQERLA 336
Cdd:PTZ00121 1553 kAEELKKAEEKKKAEEAKKAEEDKNMALrkaeEAKKAEEARIEEVMKLYEEEKKMKAEEAK-KAEEAKIKAEELKKAEEE 1631
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  337 DQMVMEFTKKkmarEAEYEAEQEKIRREKEKEIARLRALQEKAQDYQAEQDALRAKRNQEVADREWRRKEKENAQKKiet 416
Cdd:PTZ00121 1632 KKKVEQLKKK----EAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKA--- 1704
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  417 eEKLRKSRLEQVAFKEhtlavqvQRDRDEFERILRAqrEQIEREKQEQEKKAKGCLQHANE------LRRQVRENQQKHV 490
Cdd:PTZ00121 1705 -EELKKKEAEEKKKAE-------ELKKAEEENKIKA--EEAKKEAEEDKKKAEEAKKDEEEkkkiahLKKEEEKKAEEIR 1774
                         410       420
                  ....*....|....*....|....*....
gi 254675124  491 QNRLATFEEGrrLKEEAEKRRERIEDIKK 519
Cdd:PTZ00121 1775 KEKEAVIEEE--LDEEDEKRRMEVDKKIK 1801
PTZ00121 PTZ00121
MAEBL; Provisional
95-526 1.45e-08

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 57.84  E-value: 1.45e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124   95 EDPSGESLIISPEEFERIKWASQVLTKEELNAREQALKKEKEGILEAVTIRKKIMKQKEMTWNNNKKLSDLEEVARERaq 174
Cdd:PTZ00121 1313 EAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEK-- 1390
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  175 nllQRADKLRMEQEEELKDMSKiiLNAKCHAIRDAQILEKQQIQKELDEEERRLDHMMEIDRRESLQRQEDRERKRREER 254
Cdd:PTZ00121 1391 ---KKADEAKKKAEEDKKKADE--LKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKK 1465
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  255 VRGKRHIVEQIKKNEEERSL-QAEHREQEKEQMLAYLDRLQEEDLQDLERRHQEKLKMQAEIKRINDENQRQKAEMLAQE 333
Cdd:PTZ00121 1466 AEEAKKADEAKKKAEEAKKAdEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEK 1545
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  334 RLADqmvmEFTKKKMAREAEYEAEQEKIRREKEKEIARLRALQEKAQDYQAEQDALRAKRNQEVADREWRRKEKENAQKK 413
Cdd:PTZ00121 1546 KKAD----ELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIK 1621
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  414 IET-----EEKLRKSRLEQVAFKEHTLAVQVQRDRDE--FERILRAQREQIEREKQEQEKKAKGCLQHANELRRQVRENQ 486
Cdd:PTZ00121 1622 AEElkkaeEEKKKVEQLKKKEAEEKKKAEELKKAEEEnkIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEA 1701
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|...
gi 254675124  487 QKHVQNRLATFEEGRR---LKEEAEKRRERIEDIKKQKLEELR 526
Cdd:PTZ00121 1702 KKAEELKKKEAEEKKKaeeLKKAEEENKIKAEEAKKEAEEDKK 1744
PTZ00121 PTZ00121
MAEBL; Provisional
110-544 1.59e-08

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 57.84  E-value: 1.59e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  110 ERIKWASQVLTKEELNAREQALKKEKEGilEAVTIRKKIMKQKEMTWNNNKKLSDLEEVARERAQNLLQRADKLRMEQEE 189
Cdd:PTZ00121 1339 EEAKKAAEAAKAEAEAAADEAEAAEEKA--EAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAA 1416
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  190 ELKDMSkiiLNAKCHAIRDAQILEKQQIQKELDEE------ERRLDHMMEIDRRESLQRQEDRERKRREERVRGKRHIVE 263
Cdd:PTZ00121 1417 KKKADE---AKKKAEEKKKADEAKKKAEEAKKADEakkkaeEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAE 1493
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  264 QIKKNEEERSLQAEHREQEKEQMLAYLDRLQEEDLQDLERRHQEKLKMQAEIKRINDENQRQKAEMLAQERLADQMVMEF 343
Cdd:PTZ00121 1494 EAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAE 1573
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  344 TKKKMA-REAEYEAEQEKIRREKEKEIARLRALQEKAQDYQAEQDALRA---KRNQEVADREWRRKEKENAQKK----IE 415
Cdd:PTZ00121 1574 EDKNMAlRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAeelKKAEEEKKKVEQLKKKEAEEKKkaeeLK 1653
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  416 TEEKLRKSRLEQVAFKEHTLAVQVQRDRDEfERILRAQREQIEREKQEQEKKAKGCLQHANELRRQvrENQQKHVQNRLA 495
Cdd:PTZ00121 1654 KAEEENKIKAAEEAKKAEEDKKKAEEAKKA-EEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKA--EELKKAEEENKI 1730
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|.
gi 254675124  496 TFEEGRRLKEEAEKRRE--RIEDIKKQKLEELRATGLPEKYCIEVERKANI 544
Cdd:PTZ00121 1731 KAEEAKKEAEEDKKKAEeaKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVI 1781
PTZ00121 PTZ00121
MAEBL; Provisional
132-543 4.02e-08

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 56.30  E-value: 4.02e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  132 KKEKEGILEAVTIRKKIMKQKEMTWNNNKKLSDLEEVARERAQNL-----LQRADKLR-MEQEEELKDMSKIILNAKCHA 205
Cdd:PTZ00121 1083 AKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDArkaeeARKAEDARkAEEARKAEDAKRVEIARKAED 1162
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  206 IRDAQILEKQQIQKELDEEERrldhMMEIDRRESLQRQEDRERKRREERVRGKRHI-----------VEQIKKNEEERSL 274
Cdd:PTZ00121 1163 ARKAEEARKAEDAKKAEAARK----AEEVRKAEELRKAEDARKAEAARKAEEERKAeearkaedakkAEAVKKAEEAKKD 1238
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  275 QAEHREQEKEQMLAYLDRLQEEDLQDLERRHQ----EKLKMQAEIKRINDENQRQKAEMLAQERLADQMVMEFTKKKMAR 350
Cdd:PTZ00121 1239 AEEAKKAEEERNNEEIRKFEEARMAHFARRQAaikaEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKAD 1318
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  351 EAEYEAEQEKIRRE---KEKEIARLRALQEKAQDYQAEQDALRAKRNQEVADREWRRKEKENAQKKIETEEKLRKSRLEQ 427
Cdd:PTZ00121 1319 EAKKKAEEAKKKADaakKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKK 1398
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  428 VAFKEHTLAVQVQRDRDEFERILRAQREQIEREKQEQEKKAKGCLQHANELRRQVREnqQKHVQNRLATFEEGRRLKEEA 507
Cdd:PTZ00121 1399 KAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEE--AKKAEEAKKKAEEAKKADEAK 1476
                         410       420       430
                  ....*....|....*....|....*....|....*..
gi 254675124  508 EKRRE-RIEDIKKQKLEELRATGLPEKYCIEVERKAN 543
Cdd:PTZ00121 1477 KKAEEaKKADEAKKKAEEAKKKADEAKKAAEAKKKAD 1513
PTZ00121 PTZ00121
MAEBL; Provisional
108-526 5.61e-08

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 55.92  E-value: 5.61e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  108 EFERIKWASQVLTKEELNAREQALKKEKEGILEAVTIRKKIMKQKE--------MTWNNNKKLSDLEEVARERAQNLLQR 179
Cdd:PTZ00121 1080 DFDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEdarkaeeaRKAEDARKAEEARKAEDAKRVEIARK 1159
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  180 A-DKLRMEQEEELKDMSKIILNAKCHAIRDAQILEKQQIQKELD-----EEERRLDHMM---EIDRRESLQRQEDRERKR 250
Cdd:PTZ00121 1160 AeDARKAEEARKAEDAKKAEAARKAEEVRKAEELRKAEDARKAEaarkaEEERKAEEARkaeDAKKAEAVKKAEEAKKDA 1239
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  251 REERVRGKRHIVEQIKKNEEER---------SLQAEHREQEKEQMLAYLDRLQEEDLQDLERRHQEKLKMQAEIKRINDE 321
Cdd:PTZ00121 1240 EEAKKAEEERNNEEIRKFEEARmahfarrqaAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADE 1319
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  322 NQRQKAEMLAQERLADQMVMEFTKKKMAREAEYEAEQEKIRREKEK-EIARLRALQEKAQDYQAEQDALRAKRNQEVADR 400
Cdd:PTZ00121 1320 AKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKaEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKK 1399
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  401 EWRRKEKENAQKKIETEEK----LRKSRLEQVAFKEHTLAVQVQRDRDEFERILRAQREQIEREKQEQEKKAKGCLQHAN 476
Cdd:PTZ00121 1400 AEEDKKKADELKKAAAAKKkadeAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKA 1479
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|
gi 254675124  477 ELRRQVRENQQKHVQNRLATfEEGRRLKEEAEKRRERIEDIKKQKLEELR 526
Cdd:PTZ00121 1480 EEAKKADEAKKKAEEAKKKA-DEAKKAAEAKKKADEAKKAEEAKKADEAK 1528
Smc COG1196
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
113-403 2.41e-07

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 440809 [Multi-domain]  Cd Length: 983  Bit Score: 53.79  E-value: 2.41e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124 113 KWASQVLTKEELNAREQALKKEKEGILEAVTIRKKIMKQKEMTWNNNKKLSDLEEVARERAQNLLQRADKLRMEQEEELK 192
Cdd:COG1196  240 ELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLE 319
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124 193 DMSKIILNAKCHAIRDAQILEKQQIQKELDEEERRLDHMMEIDRRESLQRQEDRERKRREERVRGKRHIVEQIKKNEEER 272
Cdd:COG1196  320 ELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELA 399
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124 273 SLQAEHREQEKEQMLAyLDRLQEEDLQDLERRHQEKLKMQAEIKRINDENQRQKAEMLAQERLADQMVmeftkKKMAREA 352
Cdd:COG1196  400 AQLEELEEAEEALLER-LERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLA-----ELLEEAA 473
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 254675124 353 EYEAEQEKIRREKEKEIARLRALQEKAQDYQAEQDALRAKRNQEVADREWR 403
Cdd:COG1196  474 LLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAG 524
DUF5401 pfam17380
Family of unknown function (DUF5401); This is a family of unknown function found in ...
263-526 3.13e-07

Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.


Pssm-ID: 375164 [Multi-domain]  Cd Length: 722  Bit Score: 53.20  E-value: 3.13e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  263 EQIKKNEEERSLQAEHREQEKEQMLAyldRLQEEDLQDLERRHQEKLKMQA--EIKRINDENQRQKAEMLAQERLAdqmv 340
Cdd:pfam17380 299 ERLRQEKEEKAREVERRRKLEEAEKA---RQAEMDRQAAIYAEQERMAMERerELERIRQEERKRELERIRQEEIA---- 371
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  341 MEFTKKKmareaeyeaEQEKIRREKEKEIARLRALQEKAQDYQAEQDALRAKRNQEVADREWRRKEKENA-QKKIETEEK 419
Cdd:pfam17380 372 MEISRMR---------ELERLQMERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQEEArQREVRRLEE 442
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  420 LRKSRLEQVAFKEHTLAVQVQRDR--DEFERILRAQREQIEREKQEQEKKAKGCLQHANELRRQV---RENQQKHVQNRL 494
Cdd:pfam17380 443 ERAREMERVRLEEQERQQQVERLRqqEEERKRKKLELEKEKRDRKRAEEQRRKILEKELEERKQAmieEERKRKLLEKEM 522
                         250       260       270
                  ....*....|....*....|....*....|....*..
gi 254675124  495 -----ATFEEGRRLKEEAEKRRERIEDIKKQKLEELR 526
Cdd:pfam17380 523 eerqkAIYEEERRREAEEERRKQQEMEERRRIQEQMR 559
DUF5401 pfam17380
Family of unknown function (DUF5401); This is a family of unknown function found in ...
107-460 3.89e-07

Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.


Pssm-ID: 375164 [Multi-domain]  Cd Length: 722  Bit Score: 52.82  E-value: 3.89e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  107 EEFERIKWASQVLTKEELnAREQALKKEKEgilEAVTIRKKIMKQKEMTWNNNKKLSDLEEVARERAQNLLQRADKLRME 186
Cdd:pfam17380 291 EKFEKMEQERLRQEKEEK-AREVERRRKLE---EAEKARQAEMDRQAAIYAEQERMAMERERELERIRQEERKRELERIR 366
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  187 QEEELKDMSKIilnakchairdaqiLEKQQIQKELDEEERRLDHMMEIDRRESLQRQEDrerkrreervrgKRHIVEQIK 266
Cdd:pfam17380 367 QEEIAMEISRM--------------RELERLQMERQQKNERVRQELEAARKVKILEEER------------QRKIQQQKV 420
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  267 KNEEERSLQAEHREQEkeqmlayLDRLQEEDLQDLERRHQEKLKMQAEIKRINDENQRQKAEMLAQERLADQMVMEFTKK 346
Cdd:pfam17380 421 EMEQIRAEQEEARQRE-------VRRLEEERAREMERVRLEEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQR 493
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  347 KMAREAEYEAEQEKIRREKEKeiarlRALQEKAQDyqaeqdalraKRNQEVADREWRRKEKENAQKKIETEEKLRKSRLE 426
Cdd:pfam17380 494 RKILEKELEERKQAMIEEERK-----RKLLEKEME----------ERQKAIYEEERRREAEEERRKQQEMEERRRIQEQM 558
                         330       340       350
                  ....*....|....*....|....*....|....
gi 254675124  427 QVAFKEHTLAVQVQRDRDEFERILRAQREQIERE 460
Cdd:pfam17380 559 RKATEERSRLEAMEREREMMRQIVESEKARAEYE 592
Smc COG1196
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
119-520 1.17e-06

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 440809 [Multi-domain]  Cd Length: 983  Bit Score: 51.48  E-value: 1.17e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124 119 LTKEELNAREQALKKEKEGILEAVTIRKKIMKQKEMTWNNNKKLSDLEEVARERAQNLLQRADKLRMEQEEELKDMSKII 198
Cdd:COG1196  384 LAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLE 463
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124 199 LNAKCHAIRDAQILEKQQIQKELDEEERRLDHMMEIDRRESLQRQEDRERKRREERVRGKRHIVEQIKKNEEERSLQAEH 278
Cdd:COG1196  464 LLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAA 543
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124 279 REQEkeqmLAYLDRLQEEDLQDLERRHQEKLKMQAEIKRINDENQRQKAEMLAQERLADQMVMEFtkkkmAREAEYEAEQ 358
Cdd:COG1196  544 LAAA----LQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLV-----ASDLREADAR 614
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124 359 EKIRREKEKEIARLRALQEKAQDYQAEQDALRAKRNQEVADREWRRKEKENAQKKIETEEKLRKSRLEQVAFKEHTLAVQ 438
Cdd:COG1196  615 YYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELE 694
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124 439 VQRDRDEFERILRAQREQIEREKQEQEKKAKGcLQHANELRRQVRENQQKHVQNRLATFEEGRRLKEEAEKRRERIEDIK 518
Cdd:COG1196  695 LEEALLAEEEEERELAEAEEERLEEELEEEAL-EEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLE 773

                 ..
gi 254675124 519 KQ 520
Cdd:COG1196  774 RE 775
PTZ00121 PTZ00121
MAEBL; Provisional
110-526 1.85e-06

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 50.91  E-value: 1.85e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  110 ERIKWASQVLTKEELNAREQALKKEKEGILEAVTIRKKIMKQKEMTWNNNKKLSDLEEVARE--RAQNLLQRADKLRMEQ 187
Cdd:PTZ00121 1125 EDARKAEEARKAEDARKAEEARKAEDAKRVEIARKAEDARKAEEARKAEDAKKAEAARKAEEvrKAEELRKAEDARKAEA 1204
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  188 EEELKDMSKIILNAKCHAIRDAQILEKQQIQKELDEEERRLDHMMEIDR-RESLQRQEDRERKRREERVRGKRHIVEQIK 266
Cdd:PTZ00121 1205 ARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEiRKFEEARMAHFARRQAAIKAEEARKADELK 1284
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  267 KNEEERSLQAEHREQEKEQMLAYLDRLQEEDLQDLERRHQEKLKMQAEIKRINDENQRQKAEMLAQERLADQMVMEFTKK 346
Cdd:PTZ00121 1285 KAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEE 1364
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  347 KmAREAEYEAEQEKIR----REKEKEIARLRALQEKAQDYQAEQDALRAKRNQEVADREWRRK--EKENAQKKIETEEKL 420
Cdd:PTZ00121 1365 K-AEAAEKKKEEAKKKadaaKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKaeEKKKADEAKKKAEEA 1443
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  421 RKSRLEQVAFKEHTLAVQVQRDRDEFERILRAQREQIEREKQEQ-EKKAKGCLQHANELRRQVRENQQKHVQNRLATFEE 499
Cdd:PTZ00121 1444 KKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEaKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKK 1523
                         410       420
                  ....*....|....*....|....*....
gi 254675124  500 GRRLK--EEAEKRRERIEDIKKQKLEELR 526
Cdd:PTZ00121 1524 ADEAKkaEEAKKADEAKKAEEKKKADELK 1552
Smc COG1196
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
280-527 5.88e-06

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 440809 [Multi-domain]  Cd Length: 983  Bit Score: 49.16  E-value: 5.88e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124 280 EQEKEQMLAYLDRLqeEDLQDLERRHQEKLKMQAEIKRINDENQRQKAEMLAQERLAdqmvmeftkkkmaREAEYEAEQE 359
Cdd:COG1196  178 ERKLEATEENLERL--EDILGELERQLEPLERQAEKAERYRELKEELKELEAELLLL-------------KLRELEAELE 242
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124 360 KIRREKEKEIARLRALQEKAQDYQAEQDALRAKRNQEVADREWRRKEKENAQKKIETEEKLRKSRLEQVAfkehtlavQV 439
Cdd:COG1196  243 ELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRR--------EL 314
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124 440 QRDRDEFERILRAQREQIEREKQE------QEKKAKGCLQHANELRRQVRENQQKHVQNRLATFEEGRRLKEEAEKRRER 513
Cdd:COG1196  315 EERLEELEEELAELEEELEELEEEleeleeELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRA 394
                        250
                 ....*....|....
gi 254675124 514 IEDIKKQKLEELRA 527
Cdd:COG1196  395 AAELAAQLEELEEA 408
PTZ00121 PTZ00121
MAEBL; Provisional
110-519 7.02e-06

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 49.37  E-value: 7.02e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  110 ERIKWASQVLTKEELNAREQALKKEKEGILEAVTIRKKIMKQKEMTWNNNKKLSDLEEVARERAQNLLQRADKLRMEQEE 189
Cdd:PTZ00121 1513 DEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEA 1592
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  190 ELKDMSKIILNAKCHAIRDAQILEKQQIQKE---LDEEERRLDHMMEIDRRESLQRqedrerkrreervrgkrhiVEQIK 266
Cdd:PTZ00121 1593 RIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEelkKAEEEKKKVEQLKKKEAEEKKK-------------------AEELK 1653
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  267 KNEEERSLQAEH--REQEKEQMLAYLDRLQEEDlqdlERRHQEKLKMQAEIKRINDENQRQKAEmlaQERLADQMvmeft 344
Cdd:PTZ00121 1654 KAEEENKIKAAEeaKKAEEDKKKAEEAKKAEED----EKKAAEALKKEAEEAKKAEELKKKEAE---EKKKAEEL----- 1721
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  345 kKKMAREAEYEAEQEKIRREKEKEIArlralqEKAQDYQAEQDALRAKRNQEVADREWRRKEKENA-QKKIETEEKLRKS 423
Cdd:PTZ00121 1722 -KKAEEENKIKAEEAKKEAEEDKKKA------EEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAViEEELDEEDEKRRM 1794
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  424 RLEQVAFKEHTLAVQVQRDRDEFERILRAQREQIEREKQEQEKKAKGCLQHANELRRQV--RENQQKHVQNRLATFEEGR 501
Cdd:PTZ00121 1795 EVDKKIKDIFDNFANIIEGGKEGNLVINDSKEMEDSAIKEVADSKNMQLEEADAFEKHKfnKNNENGEDGNKEADFNKEK 1874
                         410
                  ....*....|....*...
gi 254675124  502 RLKEEAEKRRERIEDIKK 519
Cdd:PTZ00121 1875 DLKEDDEEEIEEADEIEK 1892
Caldesmon pfam02029
Caldesmon;
164-511 8.44e-06

Caldesmon;


Pssm-ID: 460421 [Multi-domain]  Cd Length: 495  Bit Score: 48.33  E-value: 8.44e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  164 DLEEVARERAQNllQRADKLRMEQEEELKDMSKIILNAKCHAIRDAQILEKQQIQKELDEEERRLDHM--MEIDRRESLQ 241
Cdd:pfam02029   3 DEEEAARERRRR--AREERRRQKEEEEPSGQVTESVEPNEHNSYEEDSELKPSGQGGLDEEEAFLDRTakREERRQKRLQ 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  242 RQEDRERKRREERVRGKRHIVEQIKKNEEERSLQAEHREQEKEQmlayLDRLQEEDLQDLERRHQEKLKMQAEIKRINDE 321
Cdd:pfam02029  81 EALERQKEFDPTIADEKESVAERKENNEEEENSSWEKEEKRDSR----LGRYKEEETEIREKEYQENKWSTEVRQAEEEG 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  322 NQRQKAEMLAQERLADQMVMEFTKKKMAREAEYEAEQEKIRREKEKEIArlralQEKAQDYQAEQDALRAKRNQEVADRE 401
Cdd:pfam02029 157 EEEEDKSEEAEEVPTENFAKEEVKDEKIKKEKKVKYESKVFLDQKRGHP-----EVKSQNGEEEVTKLKVTTKRRQGGLS 231
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  402 WRRKEKENAQKKIETEEKLRKSRLEQVAfkehtlavqvqRDRDEFERILRAQRE-QIEREKQEQEKKAKGCLQHANELRR 480
Cdd:pfam02029 232 QSQEREEEAEVFLEAEQKLEELRRRRQE-----------KESEEFEKLRQKQQEaELELEELKKKREERRKLLEEEEQRR 300
                         330       340       350
                  ....*....|....*....|....*....|.
gi 254675124  481 QVRENQQKhvqnrLATFEEGRRLKEEAEKRR 511
Cdd:pfam02029 301 KQEEAERK-----LREEEEKRRMKEEIERRR 326
YqiK COG2268
Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain [Function unknown];
346-470 5.46e-05

Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain [Function unknown];


Pssm-ID: 441869 [Multi-domain]  Cd Length: 439  Bit Score: 45.63  E-value: 5.46e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124 346 KKMAREAEYEAEQEKIRREKEKEIARLRALQEKAQDYQAEQDALRAKRNQEVADREWRRKEKENAQKKIETEEKLRKSRL 425
Cdd:COG2268  202 RIAEAEAERETEIAIAQANREAEEAELEQEREIETARIAEAEAELAKKKAEERREAETARAEAEAAYEIAEANAEREVQR 281
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 254675124 426 E-QVAFKEHTLAVQVQRDRDEFERILRAQREQIEREKQEQEKKAKG 470
Cdd:COG2268  282 QlEIAEREREIELQEKEAEREEAELEADVRKPAEAEKQAAEAEAEA 327
SMC_prok_B TIGR02168
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...
169-488 6.45e-05

chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]


Pssm-ID: 274008 [Multi-domain]  Cd Length: 1179  Bit Score: 45.82  E-value: 6.45e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124   169 ARERAQNLLQRADKLRmEQEEELKDMSkiilnAKCHAIRDAQI-LEKQQIQKELDEEERRLDHMMEIDRRESLQRQEDRE 247
Cdd:TIGR02168  665 SAKTNSSILERRREIE-ELEEKIEELE-----EKIAELEKALAeLRKELEELEEELEQLRKELEELSRQISALRKDLARL 738
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124   248 RKRREERVRGKRHIVEQIKKNEEERSLQAEHREQEKEQMLAYLDRLQ--EEDLQDLERRHQEKLKMQAEI-KRINDENQR 324
Cdd:TIGR02168  739 EAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEelEAQIEQLKEELKALREALDELrAELTLLNEE 818
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124   325 QKAEMLAQERLADQMVMeftKKKMAREAEYEAEQEKIRREK-EKEIARLRALQEKAQDYQAEQDALRAKRNQEVADREWR 403
Cdd:TIGR02168  819 AANLRERLESLERRIAA---TERRLEDLEEQIEELSEDIESlAAEIEELEELIEELESELEALLNERASLEEALALLRSE 895
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124   404 RKEKENAQKKIETEEKLRKSRLEQVAFKEHTLAVQVQRDRDEFERILRAQREQIEREKQEQEKKAKGCLQHANELRRQVR 483
Cdd:TIGR02168  896 LEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEEARRRLK 975

                   ....*
gi 254675124   484 ENQQK 488
Cdd:TIGR02168  976 RLENK 980
PTZ00266 PTZ00266
NIMA-related protein kinase; Provisional
401-502 1.03e-04

NIMA-related protein kinase; Provisional


Pssm-ID: 173502 [Multi-domain]  Cd Length: 1021  Bit Score: 45.11  E-value: 1.03e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  401 EWRRKEKENAQKKIETEEKLRKSRLEQVAfkehtlavQVQRDRDEFERILRAQREQIEREKQEQEKKAKGCLQHaNELRR 480
Cdd:PTZ00266  436 ERARIEKENAHRKALEMKILEKKRIERLE--------REERERLERERMERIERERLERERLERERLERDRLER-DRLDR 506
                          90       100
                  ....*....|....*....|..
gi 254675124  481 QVRENQQKHVQNRLatfEEGRR 502
Cdd:PTZ00266  507 LERERVDRLERDRL---EKARR 525
COG4913 COG4913
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
282-527 1.19e-04

Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];


Pssm-ID: 443941 [Multi-domain]  Cd Length: 1089  Bit Score: 44.91  E-value: 1.19e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  282 EKEQMLAYLDRLQEEdLQDLERRHQ------EKLKMQAEIKRINDENQRQKAEMLAQERLADQMVMEFTKKKMAreaEYE 355
Cdd:COG4913   219 EEPDTFEAADALVEH-FDDLERAHEaledarEQIELLEPIRELAERYAAARERLAELEYLRAALRLWFAQRRLE---LLE 294
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  356 AEQEKIRREKEKEIARLRALQEKAQDYQAEQDALRAKRNQEVADRewrrkeKENAQKKIETEEKLRKsrleqvafkehtl 435
Cdd:COG4913   295 AELEELRAELARLEAELERLEARLDALREELDELEAQIRGNGGDR------LEQLEREIERLERELE------------- 355
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  436 avQVQRDRDEFERILRAQREQIEREKQEqekkakgclqhANELRRQVRENQQKHVQNRLATFEEGRRLKEEAEKRRERIE 515
Cdd:COG4913   356 --ERERRRARLEALLAALGLPLPASAEE-----------FAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELR 422
                         250
                  ....*....|..
gi 254675124  516 DIKKQkLEELRA 527
Cdd:COG4913   423 ELEAE-IASLER 433
SMC_prok_A TIGR02169
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ...
207-528 1.30e-04

chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]


Pssm-ID: 274009 [Multi-domain]  Cd Length: 1164  Bit Score: 45.06  E-value: 1.30e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124   207 RDAQILEKQQIQKELDEEERRL-DHMMEIDRRESLQRQEDRERKRREERVRGKRHIVEQIKKNEEERSLQAEHREQEKEQ 285
Cdd:TIGR02169  690 LSSLQSELRRIENRLDELSQELsDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEE 769
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124   286 MLAYLDRLQEEdLQDLERR--HQEKLKMQAEIKRINDENQRQKAEMLAQER------LADQMVMEFTKKKMAREAEYEAE 357
Cdd:TIGR02169  770 LEEDLHKLEEA-LNDLEARlsHSRIPEIQAELSKLEEEVSRIEARLREIEQklnrltLEKEYLEKEIQELQEQRIDLKEQ 848
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124   358 QEKIRREKEKEIARLRALQEKAQDYQAEQDALRAKRNQEVADREWRRKEKENAQKKIETEE---KLRKSRLEQVAFKEHT 434
Cdd:TIGR02169  849 IKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEaqiEKKRKRLSELKAKLEA 928
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124   435 LAVQVQRDRDEFERILRAQREQIEREKQEQEKKAKGCLQHANELRRQVRENQQKHVQNRLATFEEGR-RLKEEAEKRRER 513
Cdd:TIGR02169  929 LEEELSEIEDPKGEDEEIPEEELSLEDVQAELQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRaKLEEERKAILER 1008
                          330
                   ....*....|....*
gi 254675124   514 IEDIKKQKLEELRAT 528
Cdd:TIGR02169 1009 IEEYEKKKREVFMEA 1023
COG4913 COG4913
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
349-527 2.60e-04

Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];


Pssm-ID: 443941 [Multi-domain]  Cd Length: 1089  Bit Score: 44.14  E-value: 2.60e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  349 AREAEYEAEQEKIRREKEKEIARLRALQEKAQDYQAEQDALrakrnQEVADREWRRKEKENAQKKI-ETEEKLRKSRLEQ 427
Cdd:COG4913   610 AKLAALEAELAELEEELAEAEERLEALEAELDALQERREAL-----QRLAEYSWDEIDVASAEREIaELEAELERLDASS 684
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  428 VAFKEhtLAVQVQRDRDEFERiLRAQREQIEREKQEQEKKAKGCLQHANELRRQVRENQQKHVQNRLATFEEgRRLKEEA 507
Cdd:COG4913   685 DDLAA--LEEQLEELEAELEE-LEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEE-RFAAALG 760
                         170       180
                  ....*....|....*....|
gi 254675124  508 EKRRERIEDIKKQKLEELRA 527
Cdd:COG4913   761 DAVERELRENLEERIDALRA 780
tolA PRK09510
cell envelope integrity inner membrane protein TolA; Provisional
272-419 5.19e-04

cell envelope integrity inner membrane protein TolA; Provisional


Pssm-ID: 236545 [Multi-domain]  Cd Length: 387  Bit Score: 42.49  E-value: 5.19e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124 272 RSLQAEHREQEKEQMLAYLDRLQEEDLQDLERRHQEKLKmQAEIKRINDENQRQKAEMLAQERLADQMVMEFTKKKMARE 351
Cdd:PRK09510  66 RQQQQQKSAKRAEEQRKKKEQQQAEELQQKQAAEQERLK-QLEKERLAAQEQKKQAEEAAKQAALKQKQAEEAAAKAAAA 144
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 254675124 352 AEYEAEQEkirrEKEKEIARLRALQEKAQDYQAEQDALRAKRNQEVADREWRRKEKENAQKKIETEEK 419
Cdd:PRK09510 145 AKAKAEAE----AKRAAAAAKKAAAEAKKKAEAEAAKKAAAEAKKKAEAEAAAKAAAEAKKKAEAEAK 208
SMC_prok_B TIGR02168
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...
268-527 6.44e-04

chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]


Pssm-ID: 274008 [Multi-domain]  Cd Length: 1179  Bit Score: 42.74  E-value: 6.44e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124   268 NEEERSLQAEHREQEK-EQMLAYLDRLQEEDLQDLERRHQEKLKMQAEIKRINDENQRQKAEMLAQERLADQMVMEFTKK 346
Cdd:TIGR02168  196 NELERQLKSLERQAEKaERYKELKAELRELELALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLE 275
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124   347 KMAREAEYEAEQEK---IRREKEKEIARLRALQEKAQDYQAEQDALRAKRNQEVADREWRRKEKENAQKKIETEEKLRKS 423
Cdd:TIGR02168  276 VSELEEEIEELQKElyaLANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELES 355
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124   424 RLEQVAFKEHTLAvqvqrdrdEFERILRAQREQIEREKQEQEKKAKGCLQHANELRRQVR--ENQQKHVQNRLATFEEGR 501
Cdd:TIGR02168  356 LEAELEELEAELE--------ELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEArlERLEDRRERLQQEIEELL 427
                          250       260
                   ....*....|....*....|....*..
gi 254675124   502 RLKEEAEKRRERIE-DIKKQKLEELRA 527
Cdd:TIGR02168  428 KKLEEAELKELQAElEELEEELEELQE 454
PRK12704 PRK12704
phosphodiesterase; Provisional
339-514 8.75e-04

phosphodiesterase; Provisional


Pssm-ID: 237177 [Multi-domain]  Cd Length: 520  Bit Score: 42.07  E-value: 8.75e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124 339 MVMEFTKKKMAREAEYEA----EQEKIRREKEKEIARLRAlQEKAQDYQAEQDALRAKRNQEVADREWRRKEKENA-QKK 413
Cdd:PRK12704  23 FVRKKIAEAKIKEAEEEAkrilEEAKKEAEAIKKEALLEA-KEEIHKLRNEFEKELRERRNELQKLEKRLLQKEENlDRK 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124 414 IETEEKlRKSRLEQVAFKEHTLAVQVQRDRDEFERILRAQREQIEREKQEQEKKAKgclqhaNELRRQVRENQQKHVQNR 493
Cdd:PRK12704 102 LELLEK-REEELEKKEKELEQKQQELEKKEEELEELIEEQLQELERISGLTAEEAK------EILLEKVEEEARHEAAVL 174
                        170       180
                 ....*....|....*....|.
gi 254675124 494 LATFEEgrRLKEEAEKRRERI 514
Cdd:PRK12704 175 IKEIEE--EAKEEADKKAKEI 193
MARTX_Nterm NF012221
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model ...
173-388 1.38e-03

MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model describes the N-terminal 1900 amino acids of MARTX family multifunctional-autoprocessing repeats-in-toxin holotoxins, which contain both repeat regions that facilitate their entry into eukaryotic target cells, and multiple effector domains.


Pssm-ID: 467957 [Multi-domain]  Cd Length: 1848  Bit Score: 41.74  E-value: 1.38e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  173 AQNLLQ-----RADKLRMEQEE------------ELKDMSKIILNAKCHAIRDAQILEKQQIQKELDEEERRLDHMME-- 233
Cdd:NF012221 1557 AQNALAdkeraEADRQRLEQEKqqqlaaisgsqsQLESTDQNALETNGQAQRDAILEESRAVTKELTTLAQGLDALDSqa 1636
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  234 IDRRESLQRQedrerkrreervrgKRHIVEQIKKNEEERSLQAEHREQEKeqmLAYLDRLQEEDLQDLER--RHQEKLKM 311
Cdd:NF012221 1637 TYAGESGDQW--------------RNPFAGGLLDRVQEQLDDAKKISGKQ---LADAKQRHVDNQQKVKDavAKSEAGVA 1699
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 254675124  312 QAEIKRINDENQRQKAEMLAQERLADQMVMEFTKKKMAREAEYEAEQEKIRREKEKEIARLRALQEKAQDYQAEQDA 388
Cdd:NF012221 1700 QGEQNQANAEQDIDDAKADAEKRKDDALAKQNEAQQAESDANAAANDAQSRGEQDASAAENKANQAQADAKGAKQDE 1776
MARTX_Nterm NF012221
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model ...
260-442 1.41e-03

MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model describes the N-terminal 1900 amino acids of MARTX family multifunctional-autoprocessing repeats-in-toxin holotoxins, which contain both repeat regions that facilitate their entry into eukaryotic target cells, and multiple effector domains.


Pssm-ID: 467957 [Multi-domain]  Cd Length: 1848  Bit Score: 41.74  E-value: 1.41e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  260 HIVEQIKKNE-EERSLQAEHR--------EQEKEQMLAYLDRLQEE----DLQDLERRHQ-EKLKMQAEIKRINDE---- 321
Cdd:NF012221 1546 AVSKHAKQDDaAQNALADKERaeadrqrlEQEKQQQLAAISGSQSQlestDQNALETNGQaQRDAILEESRAVTKElttl 1625
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  322 --------NQRQKAEMLAQ---ERLAD------QMVMEFTKKKMAREAE-----YEAEQEKIRREKEKEIARLRALQEKA 379
Cdd:NF012221 1626 aqgldaldSQATYAGESGDqwrNPFAGglldrvQEQLDDAKKISGKQLAdakqrHVDNQQKVKDAVAKSEAGVAQGEQNQ 1705
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 254675124  380 QDYQAEQDALRAKRNQEVADREWRRKEKENAQKKIETEEKLRKSRLEQVAFKEHTLAVQVQRD 442
Cdd:NF012221 1706 ANAEQDIDDAKADAEKRKDDALAKQNEAQQAESDANAAANDAQSRGEQDASAAENKANQAQAD 1768
COG4913 COG4913
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
288-526 1.83e-03

Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];


Pssm-ID: 443941 [Multi-domain]  Cd Length: 1089  Bit Score: 41.44  E-value: 1.83e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  288 AYLDRLQEEdLQDLERRHQEKLKMQAEIKRINDENQRQKAemlAQERLADQmvmEFTKKKMAREAEYEAEQEKIRREKEK 367
Cdd:COG4913   610 AKLAALEAE-LAELEEELAEAEERLEALEAELDALQERRE---ALQRLAEY---SWDEIDVASAEREIAELEAELERLDA 682
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  368 EIARLRALQEKAQDYQAEQDALRAKRNQEVADREWRRKEKENAQKKIEtEEKLRKSRLEQVAFKEHTLAVQVQRDRDEFE 447
Cdd:COG4913   683 SSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELD-ELQDRLEAAEDLARLELRALLEERFAAALGD 761
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  448 RILRAQREQIEREKQEQEKKAKGCLQHANELRRQVRENQQKHVQNRLATFEEGrrlkEEAEKRRERIEDI----KKQKLE 523
Cdd:COG4913   762 AVERELRENLEERIDALRARLNRAEEELERAMRAFNREWPAETADLDADLESL----PEYLALLDRLEEDglpeYEERFK 837

                  ...
gi 254675124  524 ELR 526
Cdd:COG4913   838 ELL 840
COG4913 COG4913
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
160-394 3.78e-03

Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];


Pssm-ID: 443941 [Multi-domain]  Cd Length: 1089  Bit Score: 40.28  E-value: 3.78e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  160 KKLSDLEEVARER---AQNLLQRADKLRmEQEEELKDMSKIILNAKCHAIRDAQILEKQQIQKELDEEERRLDHMMEIDR 236
Cdd:COG4913   204 KPIGDLDDFVREYmleEPDTFEAADALV-EHFDDLERAHEALEDAREQIELLEPIRELAERYAAARERLAELEYLRAALR 282
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  237 RESLQRQEDRERKRREERVrgkrhivEQIKKNEEERSLQAEHREQEKEQMLAYLDRLQEEDLQDLERrhqeklkMQAEIK 316
Cdd:COG4913   283 LWFAQRRLELLEAELEELR-------AELARLEAELERLEARLDALREELDELEAQIRGNGGDRLEQ-------LEREIE 348
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124  317 RINDENQRQKAEMLAQERLADQMVM-------EFTKKK---MAREAEYEAEQEKIRREKEKEIARLRALQEKAQDYQAEQ 386
Cdd:COG4913   349 RLERELEERERRRARLEALLAALGLplpasaeEFAALRaeaAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEI 428

                  ....*...
gi 254675124  387 DALRAKRN 394
Cdd:COG4913   429 ASLERRKS 436
EnvC COG4942
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ...
358-527 4.70e-03

Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 443969 [Multi-domain]  Cd Length: 377  Bit Score: 39.36  E-value: 4.70e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124 358 QEKIRREKEKEIARLRALQEKAQDYQAEQDALRAKRNQEVADREWRRKEKENAQKKIETEEKLRKSRLEQVAFKEHTLAV 437
Cdd:COG4942   18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRA 97
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124 438 QVQRDRDEFERILRAQREQIEREKQEQEKKAKGCLQHANELR--RQVRENQQKHVQNRLATFEEGRRLKEEAEKRRERIE 515
Cdd:COG4942   98 ELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQylKYLAPARREQAEELRADLAELAALRAELEAERAELE 177
                        170
                 ....*....|..
gi 254675124 516 DIKKQKLEELRA 527
Cdd:COG4942  178 ALLAELEEERAA 189
PRK01294 PRK01294
lipase secretion chaperone;
285-501 7.70e-03

lipase secretion chaperone;


Pssm-ID: 234937 [Multi-domain]  Cd Length: 336  Bit Score: 38.50  E-value: 7.70e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124 285 QMLAYLDRLQEE--------DLQDLERRHQEKLKMQA------EIKRINDENQRQKAEMLAQERLADQMVMEFTKKKmAR 350
Cdd:PRK01294 133 RYKAYLSALAQLeddgpgklDLQALQQLLDARLALRArffsdwEIQAFFGEENQYQRYALERLRIAQDPSLSDAQKA-AR 211
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124 351 EAEYEAEQEKIRREKEKEIARLRALQEKAQDYQAEQ---DALRAKRNQEVADrewrrkekENAQkkieteeklrksRLEq 427
Cdd:PRK01294 212 LAALEAQLPEDLRAALQESQRQQALLQQLAQLQASGaspQELRLMRAQLVGP--------EAAQ------------RLE- 270
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 254675124 428 vafkehtlavQVQRDRDEFERILR---AQREQIEREKQ--EQEKKakgclQHANELRRQVRENQQkhvQNRLATFEEGR 501
Cdd:PRK01294 271 ----------QLDQQRAAWQQRYDdylAQRAQILNAAGlsPQDRQ-----AQIAQLRQQRFSPQE---ALRLAALERIH 331
EnvC COG4942
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ...
294-528 7.73e-03

Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 443969 [Multi-domain]  Cd Length: 377  Bit Score: 38.59  E-value: 7.73e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124 294 QEEDLQDLERRHQEKLKMQAEIKRINDENQRQKAEMLAQERLADQMVMEFTKKKMAREAEYEAEQEKIrREKEKEIARLR 373
Cdd:COG4942   18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAEL-AELEKEIAELR 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124 374 ALQEKAQDYQAEQDALRAKRNQEVADREWRRKEKENAQKKieteeklRKSRLEQVAFKEHTLAVQVQRDRDEferiLRAQ 453
Cdd:COG4942   97 AELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVR-------RLQYLKYLAPARREQAEELRADLAE----LAAL 165
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 254675124 454 REQIEREKQEQEKKAKGCLQHANELRRQVRENQQ---KHVQNRLATFEEGRRLKEEAEKRRERIEDIKKQKLEELRAT 528
Cdd:COG4942  166 RAELEAERAELEALLAELEEERAALEALKAERQKllaRLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERT 243
PRK05035 PRK05035
electron transport complex protein RnfC; Provisional
306-418 7.97e-03

electron transport complex protein RnfC; Provisional


Pssm-ID: 235334 [Multi-domain]  Cd Length: 695  Bit Score: 39.16  E-value: 7.97e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124 306 QEKlkmqAEIKRINDEnqRQKAEmLAQERL-ADQMVMEftKKKMAREAEYEAEQEKiRREKEKE-----IARLRALQEKA 379
Cdd:PRK05035 433 QAK----AEIRAIEQE--KKKAE-EAKARFeARQARLE--REKAAREARHKKAAEA-RAAKDKDavaaaLARVKAKKAAA 502
                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 254675124 380 QDYQAEQDALRAKRNQEVADREWRRKEKENAQKKIETEE 418
Cdd:PRK05035 503 TQPIVIKAGARPDNSAVIAAREARKAQARARQAEKQAAA 541
EnvC COG4942
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ...
263-470 8.08e-03

Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 443969 [Multi-domain]  Cd Length: 377  Bit Score: 38.59  E-value: 8.08e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124 263 EQIKKNEEERSLQAEHREQEKEQMLAYLDRLQ--EEDLQDLERRHQEklkMQAEIKRINDENQRQKAEMLAQERLADQMV 340
Cdd:COG4942   41 KELAALKKEEKALLKQLAALERRIAALARRIRalEQELAALEAELAE---LEKEIAELRAELEAQKEELAELLRALYRLG 117
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124 341 MEFTKK---------KMAREAEYEAEQEKIRREKEKEI----ARLRALQEKAQDYQAEQDALRAKRNQEVADREWRRKEK 407
Cdd:COG4942  118 RQPPLAlllspedflDAVRRLQYLKYLAPARREQAEELradlAELAALRAELEAERAELEALLAELEEERAALEALKAER 197
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 254675124 408 ENAQKKIETEEKLRKSRLEQvafkehtLAVQVQRDRDEFERILRAQREQIEREKQEQEKKAKG 470
Cdd:COG4942  198 QKLLARLEKELAELAAELAE-------LQQEAEELEALIARLEAEAAAAAERTPAAGFAALKG 253
YqiK COG2268
Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain [Function unknown];
263-420 8.51e-03

Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain [Function unknown];


Pssm-ID: 441869 [Multi-domain]  Cd Length: 439  Bit Score: 38.70  E-value: 8.51e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254675124 263 EQIKKNEEERSLQAEHREQEKEQMLAYLDRLQEEDLQDLERRHQEKLKMQAEIKRINDENQRQKAEMLAQERLADQMVME 342
Cdd:COG2268  201 ARIAEAEAERETEIAIAQANREAEEAELEQEREIETARIAEAEAELAKKKAEERREAETARAEAEAAYEIAEANAEREVQ 280
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 254675124 343 FTKKKMAREAEYEAEQekirREKEKEIARLRALQEKAQDYQAEQDALRAKRNQEVAdREWRRKEKENAQKKIETEEKL 420
Cdd:COG2268  281 RQLEIAEREREIELQE----KEAEREEAELEADVRKPAEAEKQAAEAEAEAEAEAI-RAKGLAEAEGKRALAEAWNKL 353
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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