NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|256355005|ref|NP_082822|]
View 

mitochondrial protein C2orf69 homolog precursor [Mus musculus]

Protein Classification

UPF0565 family protein( domain architecture ID 10565877)

UPF0565 family protein similar to Homo sapiens protein C2orf69

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
C2orf69 pfam10561
C2orf69; This family includes C2orf69 from human, previously known as UPF0565, which is an ...
55-341 1.17e-155

C2orf69; This family includes C2orf69 from human, previously known as UPF0565, which is an important regulator of human mitochondrial function and may also influence other metabolic pathways.


:

Pssm-ID: 463147  Cd Length: 296  Bit Score: 439.14  E-value: 1.17e-155
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256355005   55 TVPGSDpQRSNELLLL---TSREGDSPEQRHHVLYFPGDVQNYHEIMTRHPENYQWENWSLENIATILARRFPNSYIWVI 131
Cdd:pfam10561   4 SVPGYE-NRANDILYRppiLRQQSQESYDQKHVIFFPGDVQNFFEIMESHPENFQYCKWSLENVAWILSERFPYSHIWVI 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256355005  132 KCSRMHLHKFSCYDNFVKSNMFGAPEHTPDFGAFKHLYMLLVNafnLTQNGMLFK-NRSVWNKDCkasncESNPSTSNGG 210
Cdd:pfam10561  83 KPSRMFLHKFSCFDNFVNSNMFGAPEHTPDAGAFKHLLCLLLN---LSQRLLLSQkENEGLDKDA-----NANSSATNNG 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256355005  211 --QKENERTCEHVDEPSMSFPPLS---------LDGASFTLIGFSKGCVVLNQLLFELKEAKKDKNIDAFIKSIRTMYWL 279
Cdd:pfam10561 155 cpANENALTCGNMNRSNKPFSSPSrkdatdinnLDKSSLTLIGFSKGCVVLNQLLYELHEAKTDKNMCRFLSYISDMYWL 234
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 256355005  280 DGGHSGGSNTWVTYPEVLEEFAQTGITVHTHVTPYQVHDPMRSWIGKEHKKFVQILRDLGMQ 341
Cdd:pfam10561 235 DGGHNGGSNTWVTEKSVLEELAQTGLKIHVHVTPYQVFDPMRPWIGKEHKKFVKILKELGAN 296
 
Name Accession Description Interval E-value
C2orf69 pfam10561
C2orf69; This family includes C2orf69 from human, previously known as UPF0565, which is an ...
55-341 1.17e-155

C2orf69; This family includes C2orf69 from human, previously known as UPF0565, which is an important regulator of human mitochondrial function and may also influence other metabolic pathways.


Pssm-ID: 463147  Cd Length: 296  Bit Score: 439.14  E-value: 1.17e-155
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256355005   55 TVPGSDpQRSNELLLL---TSREGDSPEQRHHVLYFPGDVQNYHEIMTRHPENYQWENWSLENIATILARRFPNSYIWVI 131
Cdd:pfam10561   4 SVPGYE-NRANDILYRppiLRQQSQESYDQKHVIFFPGDVQNFFEIMESHPENFQYCKWSLENVAWILSERFPYSHIWVI 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256355005  132 KCSRMHLHKFSCYDNFVKSNMFGAPEHTPDFGAFKHLYMLLVNafnLTQNGMLFK-NRSVWNKDCkasncESNPSTSNGG 210
Cdd:pfam10561  83 KPSRMFLHKFSCFDNFVNSNMFGAPEHTPDAGAFKHLLCLLLN---LSQRLLLSQkENEGLDKDA-----NANSSATNNG 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256355005  211 --QKENERTCEHVDEPSMSFPPLS---------LDGASFTLIGFSKGCVVLNQLLFELKEAKKDKNIDAFIKSIRTMYWL 279
Cdd:pfam10561 155 cpANENALTCGNMNRSNKPFSSPSrkdatdinnLDKSSLTLIGFSKGCVVLNQLLYELHEAKTDKNMCRFLSYISDMYWL 234
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 256355005  280 DGGHSGGSNTWVTYPEVLEEFAQTGITVHTHVTPYQVHDPMRSWIGKEHKKFVQILRDLGMQ 341
Cdd:pfam10561 235 DGGHNGGSNTWVTEKSVLEELAQTGLKIHVHVTPYQVFDPMRPWIGKEHKKFVKILKELGAN 296
 
Name Accession Description Interval E-value
C2orf69 pfam10561
C2orf69; This family includes C2orf69 from human, previously known as UPF0565, which is an ...
55-341 1.17e-155

C2orf69; This family includes C2orf69 from human, previously known as UPF0565, which is an important regulator of human mitochondrial function and may also influence other metabolic pathways.


Pssm-ID: 463147  Cd Length: 296  Bit Score: 439.14  E-value: 1.17e-155
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256355005   55 TVPGSDpQRSNELLLL---TSREGDSPEQRHHVLYFPGDVQNYHEIMTRHPENYQWENWSLENIATILARRFPNSYIWVI 131
Cdd:pfam10561   4 SVPGYE-NRANDILYRppiLRQQSQESYDQKHVIFFPGDVQNFFEIMESHPENFQYCKWSLENVAWILSERFPYSHIWVI 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256355005  132 KCSRMHLHKFSCYDNFVKSNMFGAPEHTPDFGAFKHLYMLLVNafnLTQNGMLFK-NRSVWNKDCkasncESNPSTSNGG 210
Cdd:pfam10561  83 KPSRMFLHKFSCFDNFVNSNMFGAPEHTPDAGAFKHLLCLLLN---LSQRLLLSQkENEGLDKDA-----NANSSATNNG 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256355005  211 --QKENERTCEHVDEPSMSFPPLS---------LDGASFTLIGFSKGCVVLNQLLFELKEAKKDKNIDAFIKSIRTMYWL 279
Cdd:pfam10561 155 cpANENALTCGNMNRSNKPFSSPSrkdatdinnLDKSSLTLIGFSKGCVVLNQLLYELHEAKTDKNMCRFLSYISDMYWL 234
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 256355005  280 DGGHSGGSNTWVTYPEVLEEFAQTGITVHTHVTPYQVHDPMRSWIGKEHKKFVQILRDLGMQ 341
Cdd:pfam10561 235 DGGHNGGSNTWVTEKSVLEELAQTGLKIHVHVTPYQVFDPMRPWIGKEHKKFVKILKELGAN 296
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH