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Conserved domains on  [gi|256985114|ref|NP_619597|]
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diphosphomevalonate decarboxylase [Mus musculus]

Protein Classification

diphosphomevalonate/mevalonate 3,5-bisphosphate decarboxylase family protein( domain architecture ID 706585)

diphosphomevalonate/mevalonate 3,5-bisphosphate decarboxylase family protein similar to diphosphomevalonate decarboxylase (DMD) that catalyzes the decarboxylation of mevalonate 5-diphosphate (MVAPP) to isopentenyl diphosphate (IPP), and mevalonate 3,5-bisphosphate decarboxylase (MBD) that catalyzes the ATP-independent decarboxylation of (R)-mevalonate 3,5-bisphosphate to isopentenyl phosphate

EC:  4.1.1.-
Gene Ontology:  GO:0016831|GO:0008299
PubMed:  8382990|7947744|31268677

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
MDD_C super family cl28577
Mevalonate 5-diphosphate decarboxylase C-terminal domain; Mevalonate diphosphate decarboxylase ...
 9-338 5.00e-165

Mevalonate 5-diphosphate decarboxylase C-terminal domain; Mevalonate diphosphate decarboxylase (EC:4.1.1.33) catalyzes the ATP dependent decarboxylation of mevalonate 5-diphosphate (MVAPP) to form isopentenyl 5-diphosphate. The reaction is required for production of polyisoprenoids and sterols from acetyl-CoA. This entry represents the C-terminal domain of the mevalonate 5-diphosphate decarboxylase enzyme which is a member of the GHMP kinase superfamily.


The actual alignment was detected with superfamily member PLN02407:

Pssm-ID: 475042  Cd Length: 343  Bit Score: 466.19  E-value: 5.00e-165
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256985114   9 LMVTCTAPVNIAVIKYWGKRDEALILPINSSLSVTLHQDQLKTTTTVAISKDFTEDRIWLNGREEDVGQPRLQACLREIR 88
Cdd:PLN02407   2 VMVTAQAPTNIAVIKYWGKRDEKLILPINSSISVTLDPDHLCATTTVAVSPSFDQDRLWLNGKEISLSGGRYQNCLREIR 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256985114  89 RLARKRRSTEDGDTLPLSL--SYKVHVASVNNFPTAAGLASSAAGYACLAYTLAQVYGV----EGDLSEVARRGSGSACR 162
Cdd:PLN02407  82 ARATDVEDEEKGIKITKKDweKLHVHIASYNNFPTAAGLASSAAGFACLVFALAKLMNVkedfPGELSAIARQGSGSACR 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256985114 163 SLYGGFVEWQMGEQADGKDSIARQIAPEWHWPQLRILILVVSADKKQTGSTVGMQTSVETSTLLKFRAESVVPERMKEMT 242
Cdd:PLN02407 162 SLYGGFVKWNMGKKEDGSDSIAVQLADEKHWDDLVIIIAVVSSRQKETSSTSGMRESVETSPLLQHRAKEVVPKRILQME 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256985114 243 RCIQEQDFQGFAQLTMKDSNQFHATCLDTFPPISYLNDTSRRIIQLVHRFNTHQGQTKVAYTFDAGPNAVIFTLEDTVAE 322
Cdd:PLN02407 242 EAIKNRDFASFAKLTCADSNQFHATCLDTSPPIFYMNDTSRRIISLVEKWNRSEGTPQVAYTFDAGPNAVLIALNRKVAA 321

                        330
                 ....*....|....*..
gi 256985114 323 FV-AAVRHSFPPAANGD 338
Cdd:PLN02407 322 QLlQRLLYYFPPSSDTD 338
 
Name Accession Description Interval E-value
PLN02407 PLN02407
diphosphomevalonate decarboxylase
 9-338 5.00e-165

diphosphomevalonate decarboxylase


Pssm-ID: 178029  Cd Length: 343  Bit Score: 466.19  E-value: 5.00e-165
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256985114   9 LMVTCTAPVNIAVIKYWGKRDEALILPINSSLSVTLHQDQLKTTTTVAISKDFTEDRIWLNGREEDVGQPRLQACLREIR 88
Cdd:PLN02407   2 VMVTAQAPTNIAVIKYWGKRDEKLILPINSSISVTLDPDHLCATTTVAVSPSFDQDRLWLNGKEISLSGGRYQNCLREIR 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256985114  89 RLARKRRSTEDGDTLPLSL--SYKVHVASVNNFPTAAGLASSAAGYACLAYTLAQVYGV----EGDLSEVARRGSGSACR 162
Cdd:PLN02407  82 ARATDVEDEEKGIKITKKDweKLHVHIASYNNFPTAAGLASSAAGFACLVFALAKLMNVkedfPGELSAIARQGSGSACR 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256985114 163 SLYGGFVEWQMGEQADGKDSIARQIAPEWHWPQLRILILVVSADKKQTGSTVGMQTSVETSTLLKFRAESVVPERMKEMT 242
Cdd:PLN02407 162 SLYGGFVKWNMGKKEDGSDSIAVQLADEKHWDDLVIIIAVVSSRQKETSSTSGMRESVETSPLLQHRAKEVVPKRILQME 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256985114 243 RCIQEQDFQGFAQLTMKDSNQFHATCLDTFPPISYLNDTSRRIIQLVHRFNTHQGQTKVAYTFDAGPNAVIFTLEDTVAE 322
Cdd:PLN02407 242 EAIKNRDFASFAKLTCADSNQFHATCLDTSPPIFYMNDTSRRIISLVEKWNRSEGTPQVAYTFDAGPNAVLIALNRKVAA 321

                        330
                 ....*....|....*..
gi 256985114 323 FV-AAVRHSFPPAANGD 338
Cdd:PLN02407 322 QLlQRLLYYFPPSSDTD 338
MDD_C pfam18376
Mevalonate 5-diphosphate decarboxylase C-terminal domain; Mevalonate diphosphate decarboxylase ...
 198-383 1.15e-120

Mevalonate 5-diphosphate decarboxylase C-terminal domain; Mevalonate diphosphate decarboxylase (EC:4.1.1.33) catalyzes the ATP dependent decarboxylation of mevalonate 5-diphosphate (MVAPP) to form isopentenyl 5-diphosphate. The reaction is required for production of polyisoprenoids and sterols from acetyl-CoA. This entry represents the C-terminal domain of the mevalonate 5-diphosphate decarboxylase enzyme which is a member of the GHMP kinase superfamily.


Pssm-ID: 465732  Cd Length: 186  Bit Score: 347.62  E-value: 1.15e-120
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256985114  198 ILILVVSADKKQTGSTVGMQTSVETSTLLKFRAESVVPERMKEMTRCIQEQDFQGFAQLTMKDSNQFHATCLDTFPPISY 277
Cdd:pfam18376   1 VLILVVSDEKKEVSSTSGMQRSVETSPLLKHRAEHVVPERMEAMEKAILAKDFETFAEITMKDSNQFHAVCLDTYPPIFY 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256985114  278 LNDTSRRIIQLVHRFNTHQGQTKVAYTFDAGPNAVIFTLEDTVAEFVAAVRHSFPPAANGDKFLKGLQVAPVLLSDELKA 357
Cdd:pfam18376  81 LNDTSRAIIQLVHAYNEFAGRIKVAYTFDAGPNAVLYLLEKDVPKVLSLLKHFFPPSTNGDQFFKGLPVLPSELSEELKA 160

                         170       180
                  ....*....|....*....|....*.
gi 256985114  358 ALAVEPSPGGVQYIIATQVGPGPQVL 383
Cdd:pfam18376 161 SLAMKPIPGGVKYIIHTKVGDGPRVL 186
mevDPdecarb TIGR01240
diphosphomevalonate decarboxylase; This enzyme catalyzes the last step in the synthesis of ...
 11-331 2.86e-95

diphosphomevalonate decarboxylase; This enzyme catalyzes the last step in the synthesis of isopentenyl diphosphate (IPP) in the mevalonate pathway. Alternate names: mevalonate diphosphate decarboxylase; pyrophosphomevalonate decarboxylase [Central intermediary metabolism, Other]


Pssm-ID: 130307  Cd Length: 305  Bit Score: 287.62  E-value: 2.86e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256985114   11 VTCTAPVNIAVIKYWGKRDEALILPINSSLSVTLhqDQLKTTTTVAISKDFTEDRIWLNGREE-DVGQPRLQACLREIRR 89
Cdd:TIGR01240   1 ASVTAYVNIATIKYWGKRNTKLNLPTNSSISLTL--SQLRTLTSVAFADEFERDTFYLNGTLQhSIDNEKTSNCLDDFRQ 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256985114   90 LARkrrstedgdtlplsLSYKVHVASVNNFPTAAGLASSAAGYACLAYTLAQVYGVEGD---LSEVARRGSGSACRSLYG 166
Cdd:TIGR01240  79 LRK--------------EQEKLHIVSQNNFPTAAGLASSASGLAALVSACAKLYQLPLDtseLSRIARKGSGSACRSLFG 144

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256985114  167 GFVEWQMGEqaDGKDSIARQIAPEWHWPQLRILILVVSADKKQTGSTVGMQTSVETSTLLKFRAESVVPErMKEMTRCIQ 246
Cdd:TIGR01240 145 GYVAWEKGK--DDHSSAAVQVADDSDWPQ*AMCVLVVNDIKKDVSSRQGMQLTVATSELFKEWIEHVVPD-FEV*RKAIK 221

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256985114  247 EQDFQGFAQLTMKDSNQFHATCLDTFPPISYLNDTSRRIIQLVHRFNthQGQTKVAYTFDAGPNAVIFTLEDTVAEFVAA 326
Cdd:TIGR01240 222 TKDFATFGKETEANSLSMHATTLDAFPPFFYLNDTSKRAMSAVHTLR--QGGTICYFTMDAGPNVKVLYLAENLSKLFEF 299


                  ....*
gi 256985114  327 VRHSF 331
Cdd:TIGR01240 300 IYKLF 304
MVD1 COG3407
Mevalonate pyrophosphate decarboxylase [Lipid transport and metabolism]; Mevalonate ...
 10-332 1.28e-93

Mevalonate pyrophosphate decarboxylase [Lipid transport and metabolism]; Mevalonate pyrophosphate decarboxylase is part of the Pathway/BioSystem: Isoprenoid biosynthesis


Pssm-ID: 442633  Cd Length: 322  Bit Score: 283.62  E-value: 1.28e-93
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256985114  10 MVTCTAPVNIAVIKYWGKRDEALILPINSSLSVTLhqDQLKTTTTVAISKDFTEDRIWLNGREED-VGQPRLQACLREIR 88
Cdd:COG3407    5 SATARAHSNIALIKYWGKRDEELNLPANPSLSLTL--DAFYTTTTVEFDKDLAEDEFILNGEPQKgKFLPKISKFLDRVR 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256985114  89 RLARKrrstedgdtlplslSYKVHVASVNNFPTAAGLASSAAGYACLAYTLAQVYGVEGD---LSEVARRGSGSACRSLY 165
Cdd:COG3407   83 ALAGK--------------SYHARIESENNFPTAAGLASSASGFAALALAANSAEGLDLDdrkLSRLARLGSGSACRSIF 148

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256985114 166 GGFVEWQMGEqaDGKDSIARQIAPEwHWPqLRILILVVSADKKQTGSTVGMQTsVETSTLLKFRAESvVPERMKEMTRCI 245
Cdd:COG3407  149 GGFVEWGKGE--DDEDSYAVPIPAE-DWD-LADIILVVDKGEKKVSSREGMKT-AETSPFYPAWVEQ-AEEDLEKLKEAI 222

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256985114 246 QEQDFQGFAQLTMKDSNQFHATCLDTFPPISYLNDTSRRIIQLVHRFNthQGQTKVAYTFDAGPNAVIFTLEDTVAEFVA 325
Cdd:COG3407  223 KAGDFEALGEIAESNALRMHATMMTSNPPFIYWKPNTLEVINAVRELR--EEGLPVYFTLDAGPNVKVLCPEEDAEKVAA 300


                 ....*..
gi 256985114 326 AVRHSFP 332
Cdd:COG3407  301 FLAAELV 307
 
Name Accession Description Interval E-value
PLN02407 PLN02407
diphosphomevalonate decarboxylase
 9-338 5.00e-165

diphosphomevalonate decarboxylase


Pssm-ID: 178029  Cd Length: 343  Bit Score: 466.19  E-value: 5.00e-165
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256985114   9 LMVTCTAPVNIAVIKYWGKRDEALILPINSSLSVTLHQDQLKTTTTVAISKDFTEDRIWLNGREEDVGQPRLQACLREIR 88
Cdd:PLN02407   2 VMVTAQAPTNIAVIKYWGKRDEKLILPINSSISVTLDPDHLCATTTVAVSPSFDQDRLWLNGKEISLSGGRYQNCLREIR 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256985114  89 RLARKRRSTEDGDTLPLSL--SYKVHVASVNNFPTAAGLASSAAGYACLAYTLAQVYGV----EGDLSEVARRGSGSACR 162
Cdd:PLN02407  82 ARATDVEDEEKGIKITKKDweKLHVHIASYNNFPTAAGLASSAAGFACLVFALAKLMNVkedfPGELSAIARQGSGSACR 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256985114 163 SLYGGFVEWQMGEQADGKDSIARQIAPEWHWPQLRILILVVSADKKQTGSTVGMQTSVETSTLLKFRAESVVPERMKEMT 242
Cdd:PLN02407 162 SLYGGFVKWNMGKKEDGSDSIAVQLADEKHWDDLVIIIAVVSSRQKETSSTSGMRESVETSPLLQHRAKEVVPKRILQME 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256985114 243 RCIQEQDFQGFAQLTMKDSNQFHATCLDTFPPISYLNDTSRRIIQLVHRFNTHQGQTKVAYTFDAGPNAVIFTLEDTVAE 322
Cdd:PLN02407 242 EAIKNRDFASFAKLTCADSNQFHATCLDTSPPIFYMNDTSRRIISLVEKWNRSEGTPQVAYTFDAGPNAVLIALNRKVAA 321

                        330
                 ....*....|....*..
gi 256985114 323 FV-AAVRHSFPPAANGD 338
Cdd:PLN02407 322 QLlQRLLYYFPPSSDTD 338
MDD_C pfam18376
Mevalonate 5-diphosphate decarboxylase C-terminal domain; Mevalonate diphosphate decarboxylase ...
 198-383 1.15e-120

Mevalonate 5-diphosphate decarboxylase C-terminal domain; Mevalonate diphosphate decarboxylase (EC:4.1.1.33) catalyzes the ATP dependent decarboxylation of mevalonate 5-diphosphate (MVAPP) to form isopentenyl 5-diphosphate. The reaction is required for production of polyisoprenoids and sterols from acetyl-CoA. This entry represents the C-terminal domain of the mevalonate 5-diphosphate decarboxylase enzyme which is a member of the GHMP kinase superfamily.


Pssm-ID: 465732  Cd Length: 186  Bit Score: 347.62  E-value: 1.15e-120
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256985114  198 ILILVVSADKKQTGSTVGMQTSVETSTLLKFRAESVVPERMKEMTRCIQEQDFQGFAQLTMKDSNQFHATCLDTFPPISY 277
Cdd:pfam18376   1 VLILVVSDEKKEVSSTSGMQRSVETSPLLKHRAEHVVPERMEAMEKAILAKDFETFAEITMKDSNQFHAVCLDTYPPIFY 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256985114  278 LNDTSRRIIQLVHRFNTHQGQTKVAYTFDAGPNAVIFTLEDTVAEFVAAVRHSFPPAANGDKFLKGLQVAPVLLSDELKA 357
Cdd:pfam18376  81 LNDTSRAIIQLVHAYNEFAGRIKVAYTFDAGPNAVLYLLEKDVPKVLSLLKHFFPPSTNGDQFFKGLPVLPSELSEELKA 160

                         170       180
                  ....*....|....*....|....*.
gi 256985114  358 ALAVEPSPGGVQYIIATQVGPGPQVL 383
Cdd:pfam18376 161 SLAMKPIPGGVKYIIHTKVGDGPRVL 186
mevDPdecarb TIGR01240
diphosphomevalonate decarboxylase; This enzyme catalyzes the last step in the synthesis of ...
 11-331 2.86e-95

diphosphomevalonate decarboxylase; This enzyme catalyzes the last step in the synthesis of isopentenyl diphosphate (IPP) in the mevalonate pathway. Alternate names: mevalonate diphosphate decarboxylase; pyrophosphomevalonate decarboxylase [Central intermediary metabolism, Other]


Pssm-ID: 130307  Cd Length: 305  Bit Score: 287.62  E-value: 2.86e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256985114   11 VTCTAPVNIAVIKYWGKRDEALILPINSSLSVTLhqDQLKTTTTVAISKDFTEDRIWLNGREE-DVGQPRLQACLREIRR 89
Cdd:TIGR01240   1 ASVTAYVNIATIKYWGKRNTKLNLPTNSSISLTL--SQLRTLTSVAFADEFERDTFYLNGTLQhSIDNEKTSNCLDDFRQ 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256985114   90 LARkrrstedgdtlplsLSYKVHVASVNNFPTAAGLASSAAGYACLAYTLAQVYGVEGD---LSEVARRGSGSACRSLYG 166
Cdd:TIGR01240  79 LRK--------------EQEKLHIVSQNNFPTAAGLASSASGLAALVSACAKLYQLPLDtseLSRIARKGSGSACRSLFG 144

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256985114  167 GFVEWQMGEqaDGKDSIARQIAPEWHWPQLRILILVVSADKKQTGSTVGMQTSVETSTLLKFRAESVVPErMKEMTRCIQ 246
Cdd:TIGR01240 145 GYVAWEKGK--DDHSSAAVQVADDSDWPQ*AMCVLVVNDIKKDVSSRQGMQLTVATSELFKEWIEHVVPD-FEV*RKAIK 221

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256985114  247 EQDFQGFAQLTMKDSNQFHATCLDTFPPISYLNDTSRRIIQLVHRFNthQGQTKVAYTFDAGPNAVIFTLEDTVAEFVAA 326
Cdd:TIGR01240 222 TKDFATFGKETEANSLSMHATTLDAFPPFFYLNDTSKRAMSAVHTLR--QGGTICYFTMDAGPNVKVLYLAENLSKLFEF 299


                  ....*
gi 256985114  327 VRHSF 331
Cdd:TIGR01240 300 IYKLF 304
MVD1 COG3407
Mevalonate pyrophosphate decarboxylase [Lipid transport and metabolism]; Mevalonate ...
 10-332 1.28e-93

Mevalonate pyrophosphate decarboxylase [Lipid transport and metabolism]; Mevalonate pyrophosphate decarboxylase is part of the Pathway/BioSystem: Isoprenoid biosynthesis


Pssm-ID: 442633  Cd Length: 322  Bit Score: 283.62  E-value: 1.28e-93
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256985114  10 MVTCTAPVNIAVIKYWGKRDEALILPINSSLSVTLhqDQLKTTTTVAISKDFTEDRIWLNGREED-VGQPRLQACLREIR 88
Cdd:COG3407    5 SATARAHSNIALIKYWGKRDEELNLPANPSLSLTL--DAFYTTTTVEFDKDLAEDEFILNGEPQKgKFLPKISKFLDRVR 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256985114  89 RLARKrrstedgdtlplslSYKVHVASVNNFPTAAGLASSAAGYACLAYTLAQVYGVEGD---LSEVARRGSGSACRSLY 165
Cdd:COG3407   83 ALAGK--------------SYHARIESENNFPTAAGLASSASGFAALALAANSAEGLDLDdrkLSRLARLGSGSACRSIF 148

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256985114 166 GGFVEWQMGEqaDGKDSIARQIAPEwHWPqLRILILVVSADKKQTGSTVGMQTsVETSTLLKFRAESvVPERMKEMTRCI 245
Cdd:COG3407  149 GGFVEWGKGE--DDEDSYAVPIPAE-DWD-LADIILVVDKGEKKVSSREGMKT-AETSPFYPAWVEQ-AEEDLEKLKEAI 222

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 256985114 246 QEQDFQGFAQLTMKDSNQFHATCLDTFPPISYLNDTSRRIIQLVHRFNthQGQTKVAYTFDAGPNAVIFTLEDTVAEFVA 325
Cdd:COG3407  223 KAGDFEALGEIAESNALRMHATMMTSNPPFIYWKPNTLEVINAVRELR--EEGLPVYFTLDAGPNVKVLCPEEDAEKVAA 300


                 ....*..
gi 256985114 326 AVRHSFP 332
Cdd:COG3407  301 FLAAELV 307
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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