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Conserved domains on  [gi|153267502|ref|NP_619605|]
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dnaJ homolog subfamily C member 28 isoform 2 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DJC28_CD pfam09350
DnaJ homolog, subfamily C, member 28, conserved domain; This domain is found in proteins that ...
 203-271 3.49e-23

DnaJ homolog, subfamily C, member 28, conserved domain; This domain is found in proteins that may have a role in protein folding or as a chaperone, including DnaJ homolog subfamily C member 28. DnaJ is a member of the J-protein family (also known as HSP40), which are defined by the presence of a J domain that regulate the activity of 70kDa heat-shock proteins. The function of this domain is not yet known.


:

Pssm-ID: 462766  Cd Length: 72  Bit Score: 91.84  E-value: 3.49e-23
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 153267502  203 LVEDLIQESMAKGDFDNLSGKGKPLKKF---SGCSYIDPMTHNLNRILIDNGYQPEWILMQKEIKDTIEQLR 271
Cdd:pfam09350   1 LAERRIREAIERGEFDNLPGRGKPLPLDddsEHNPFVPEELRMANRILKNAGVLPPWIELRKEIERLIELLR 72
PLN03085 super family cl29188
nucleobase:cation symporter-1; Provisional
 200-338 1.85e-22

nucleobase:cation symporter-1; Provisional


The actual alignment was detected with superfamily member PLN03085:

Pssm-ID: 215566  Cd Length: 221  Bit Score: 94.28  E-value: 1.85e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153267502 200 IERLVEDLIQESMAKGDFDNLSGKGKPLKkFSGCSYIDPMTHNLNRILIDNGYQPEWILMQKEIKDTIEQLREALlmsrK 279
Cdd:PLN03085  89 IINVVEQRIWHSMEEGHFENLPGKGKPLN-LSTNPHADPAEDTLYRILSKNGCAPEWVELNKEIRGQINEWRSAL----K 163

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 153267502 280 KLGNPLSPTEQKQWAQVCEQFQEKIRKLNKRINDFNLIVPiLTRQKVHFDAQKEIIRVQ 338
Cdd:PLN03085 164 KAWANRCEGDDSQWIEDSRLLQEQLRQINNKVFRYNLIVP-FGRQMFGLKWEKEVDRLK 221
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 48-108 2.40e-12

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


:

Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 61.33  E-value: 2.40e-12
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 153267502   48 EYYRLLNLDEGCSVDDVRESFHKLARQYHPDSGSSDADSA-TFIKIEEAYrNVLSHAIKRMH 108
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDPEAEeKFKEINEAY-EVLSDPEKRAI 61
 
Name Accession Description Interval E-value
DJC28_CD pfam09350
DnaJ homolog, subfamily C, member 28, conserved domain; This domain is found in proteins that ...
 203-271 3.49e-23

DnaJ homolog, subfamily C, member 28, conserved domain; This domain is found in proteins that may have a role in protein folding or as a chaperone, including DnaJ homolog subfamily C member 28. DnaJ is a member of the J-protein family (also known as HSP40), which are defined by the presence of a J domain that regulate the activity of 70kDa heat-shock proteins. The function of this domain is not yet known.


Pssm-ID: 462766  Cd Length: 72  Bit Score: 91.84  E-value: 3.49e-23
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 153267502  203 LVEDLIQESMAKGDFDNLSGKGKPLKKF---SGCSYIDPMTHNLNRILIDNGYQPEWILMQKEIKDTIEQLR 271
Cdd:pfam09350   1 LAERRIREAIERGEFDNLPGRGKPLPLDddsEHNPFVPEELRMANRILKNAGVLPPWIELRKEIERLIELLR 72
PLN03085 PLN03085
nucleobase:cation symporter-1; Provisional
 200-338 1.85e-22

nucleobase:cation symporter-1; Provisional


Pssm-ID: 215566  Cd Length: 221  Bit Score: 94.28  E-value: 1.85e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153267502 200 IERLVEDLIQESMAKGDFDNLSGKGKPLKkFSGCSYIDPMTHNLNRILIDNGYQPEWILMQKEIKDTIEQLREALlmsrK 279
Cdd:PLN03085  89 IINVVEQRIWHSMEEGHFENLPGKGKPLN-LSTNPHADPAEDTLYRILSKNGCAPEWVELNKEIRGQINEWRSAL----K 163

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 153267502 280 KLGNPLSPTEQKQWAQVCEQFQEKIRKLNKRINDFNLIVPiLTRQKVHFDAQKEIIRVQ 338
Cdd:PLN03085 164 KAWANRCEGDDSQWIEDSRLLQEQLRQINNKVFRYNLIVP-FGRQMFGLKWEKEVDRLK 221
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 48-108 2.40e-12

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 61.33  E-value: 2.40e-12
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 153267502   48 EYYRLLNLDEGCSVDDVRESFHKLARQYHPDSGSSDADSA-TFIKIEEAYrNVLSHAIKRMH 108
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDPEAEeKFKEINEAY-EVLSDPEKRAI 61
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 49-106 6.92e-12

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 62.41  E-value: 6.92e-12
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 153267502  49 YYRLLNLDEGCSVDDVRESFHKLARQYHPDSGSSDADS-ATFIKIEEAYrNVLSHAIKR 106
Cdd:COG0484    2 YYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDPEAeEKFKEINEAY-EVLSDPEKR 59
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 48-101 2.33e-11

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 58.33  E-value: 2.33e-11
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 153267502  48 EYYRLLNLDEGCSVDDVRESFHKLARQYHPDSGSSDADSA-TFIKIEEAYrNVLS 101
Cdd:cd06257    1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEeKFKEINEAY-EVLS 54
DnaJ smart00271
DnaJ molecular chaperone homology domain;
47-105 2.41e-11

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 58.40  E-value: 2.41e-11
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 153267502    47 REYYRLLNLDEGCSVDDVRESFHKLARQYHPDSGSSDADSAT--FIKIEEAYRnVLSHAIK 105
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEekFKEINEAYE-VLSDPEK 60
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
 47-111 1.95e-09

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 58.87  E-value: 1.95e-09
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 153267502  47 REYYRLLNLDEGCSVDDVRESFHKLARQYHPDSGSSDADSATFIKIEEAYrNVLSHAIKRMHAGQ 111
Cdd:PRK14287   4 RDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAY-DTLSDPQKKAHYDQ 67
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
42-106 5.67e-09

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 57.52  E-value: 5.67e-09
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 153267502  42 ESQKlREYYRLLNLDEGCSVDDVRESFHKLARQYHPDSGSSDADSATFIKIEEAYrNVLSHAIKR 106
Cdd:NF037946   1 MEEK-RDYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRNKAPDAAEIFAEINEAY-EVLSNPEKR 63
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 49-106 8.39e-07

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 50.29  E-value: 8.39e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 153267502   49 YYRLLNLDEGCSVDDVRESFHKLARQYHPDSGSSDADSATFIKIEEAYrNVLSHAIKR 106
Cdd:TIGR02349   2 YYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAY-EVLSDPEKR 58
PRK10203 PRK10203
hypothetical protein; Provisional
 200-313 2.97e-04

hypothetical protein; Provisional


Pssm-ID: 182303  Cd Length: 122  Bit Score: 40.41  E-value: 2.97e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153267502 200 IERLVEDLIQESMAKGDFDNLSGKGKPLkKFSGCSYIDPMTHNLNRILIDNGYQPEWILMQKE---IKDTIEQLREA--- 273
Cdd:PRK10203   4 LDQWAERHILEAQRKGEFDNLPGSGEPL-ILDDDSHVPPELRAGYRLLKNAGCLPPELEQRREaiqLLDLLKGIREDdpq 82

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 153267502 274 -LLMSRKklgnpLSPTEQK-QWAQVCEQF--QEKIRKLNKRIND 313
Cdd:PRK10203  83 yQEVSRR-----LSLLELKlRQAGLSTDFlrGDYADKLLNKIND 121
 
Name Accession Description Interval E-value
DJC28_CD pfam09350
DnaJ homolog, subfamily C, member 28, conserved domain; This domain is found in proteins that ...
 203-271 3.49e-23

DnaJ homolog, subfamily C, member 28, conserved domain; This domain is found in proteins that may have a role in protein folding or as a chaperone, including DnaJ homolog subfamily C member 28. DnaJ is a member of the J-protein family (also known as HSP40), which are defined by the presence of a J domain that regulate the activity of 70kDa heat-shock proteins. The function of this domain is not yet known.


Pssm-ID: 462766  Cd Length: 72  Bit Score: 91.84  E-value: 3.49e-23
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 153267502  203 LVEDLIQESMAKGDFDNLSGKGKPLKKF---SGCSYIDPMTHNLNRILIDNGYQPEWILMQKEIKDTIEQLR 271
Cdd:pfam09350   1 LAERRIREAIERGEFDNLPGRGKPLPLDddsEHNPFVPEELRMANRILKNAGVLPPWIELRKEIERLIELLR 72
PLN03085 PLN03085
nucleobase:cation symporter-1; Provisional
 200-338 1.85e-22

nucleobase:cation symporter-1; Provisional


Pssm-ID: 215566  Cd Length: 221  Bit Score: 94.28  E-value: 1.85e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153267502 200 IERLVEDLIQESMAKGDFDNLSGKGKPLKkFSGCSYIDPMTHNLNRILIDNGYQPEWILMQKEIKDTIEQLREALlmsrK 279
Cdd:PLN03085  89 IINVVEQRIWHSMEEGHFENLPGKGKPLN-LSTNPHADPAEDTLYRILSKNGCAPEWVELNKEIRGQINEWRSAL----K 163

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 153267502 280 KLGNPLSPTEQKQWAQVCEQFQEKIRKLNKRINDFNLIVPiLTRQKVHFDAQKEIIRVQ 338
Cdd:PLN03085 164 KAWANRCEGDDSQWIEDSRLLQEQLRQINNKVFRYNLIVP-FGRQMFGLKWEKEVDRLK 221
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 48-108 2.40e-12

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 61.33  E-value: 2.40e-12
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 153267502   48 EYYRLLNLDEGCSVDDVRESFHKLARQYHPDSGSSDADSA-TFIKIEEAYrNVLSHAIKRMH 108
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDPEAEeKFKEINEAY-EVLSDPEKRAI 61
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 49-106 6.92e-12

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 62.41  E-value: 6.92e-12
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 153267502  49 YYRLLNLDEGCSVDDVRESFHKLARQYHPDSGSSDADS-ATFIKIEEAYrNVLSHAIKR 106
Cdd:COG0484    2 YYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDPEAeEKFKEINEAY-EVLSDPEKR 59
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 48-101 2.33e-11

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 58.33  E-value: 2.33e-11
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 153267502  48 EYYRLLNLDEGCSVDDVRESFHKLARQYHPDSGSSDADSA-TFIKIEEAYrNVLS 101
Cdd:cd06257    1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEeKFKEINEAY-EVLS 54
DnaJ smart00271
DnaJ molecular chaperone homology domain;
47-105 2.41e-11

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 58.40  E-value: 2.41e-11
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 153267502    47 REYYRLLNLDEGCSVDDVRESFHKLARQYHPDSGSSDADSAT--FIKIEEAYRnVLSHAIK 105
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEekFKEINEAYE-VLSDPEK 60
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
46-106 4.56e-11

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 58.96  E-value: 4.56e-11
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 153267502  46 LREYYRLLNLDEGCSVDDVRESFHKLARQYHPDSGSSDADSAT--FIKIEEAYrNVLSHAIKR 106
Cdd:COG2214    4 LKDHYAVLGVPPDASLEEIRQAYRRLAKLLHPDRGGELKALAEelFQRLNEAY-EVLSDPERR 65
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
 47-111 1.95e-09

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 58.87  E-value: 1.95e-09
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 153267502  47 REYYRLLNLDEGCSVDDVRESFHKLARQYHPDSGSSDADSATFIKIEEAYrNVLSHAIKRMHAGQ 111
Cdd:PRK14287   4 RDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAY-DTLSDPQKKAHYDQ 67
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
42-106 5.67e-09

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 57.52  E-value: 5.67e-09
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 153267502  42 ESQKlREYYRLLNLDEGCSVDDVRESFHKLARQYHPDSGSSDADSATFIKIEEAYrNVLSHAIKR 106
Cdd:NF037946   1 MEEK-RDYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRNKAPDAAEIFAEINEAY-EVLSNPEKR 63
PRK14295 PRK14295
molecular chaperone DnaJ;
47-106 7.70e-09

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 56.78  E-value: 7.70e-09
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 153267502  47 REYYRLLNLDEGCSVDDVRESFHKLARQYHPDSGSSDADSAT-FIKIEEAYrNVLSHAIKR 106
Cdd:PRK14295   9 KDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEErFKEISEAY-DVLSDEKKR 68
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
 47-110 8.36e-09

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 56.78  E-value: 8.36e-09
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 153267502  47 REYYRLLNLDEGCSVDDVRESFHKLARQYHPDSgSSDADSA-TFIKIEEAYrNVLSHAIKRM------HAG 110
Cdd:PRK14298   5 RDYYEILGLSKDASVEDIKKAYRKLAMKYHPDK-NKEPDAEeKFKEISEAY-AVLSDAEKRAqydrfgHAG 73
PRK14280 PRK14280
molecular chaperone DnaJ;
47-111 1.41e-08

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 55.88  E-value: 1.41e-08
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 153267502  47 REYYRLLNLDEGCSVDDVRESFHKLARQYHPD-SGSSDADSaTFIKIEEAYRnVLSHAIKRMHAGQ 111
Cdd:PRK14280   4 RDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDiNKEEGADE-KFKEISEAYE-VLSDDQKRAQYDQ 67
PRK14297 PRK14297
molecular chaperone DnaJ;
47-106 3.93e-08

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 54.79  E-value: 3.93e-08
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 153267502  47 REYYRLLNLDEGCSVDDVRESFHKLARQYHPDSGSSDADS-ATFIKIEEAYRnVLSHAIKR 106
Cdd:PRK14297   4 KDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAeEKFKEINEAYQ-VLSDPQKK 63
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
 47-110 5.88e-08

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 54.06  E-value: 5.88e-08
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153267502  47 REYYRLLNLDEGCSVDDVRESFHKLARQYHPDSGSSDADSATFIKIEEAYrNVLSHAIKRM------HAG 110
Cdd:PRK14283   5 RDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEGAEEKFKEISEAY-AVLSDDEKRQrydqfgHAG 73
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
 47-106 6.31e-08

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 53.40  E-value: 6.31e-08
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 153267502  47 REYYRLLNLDEGCSVDDVRESFHKLARQYHPDSGSSDADSATFIKIEEAYrNVLSHAIKR 106
Cdd:PRK14299   4 KDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPGAEEKFKEINEAY-TVLSDPEKR 62
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 47-110 7.01e-08

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 53.99  E-value: 7.01e-08
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 153267502  47 REYYRLLNLDEGCSVDDVRESFHKLARQYHPDSGSSDADS-ATFIKIEEAYrNVLSHAIKRM------HAG 110
Cdd:PRK10767   4 RDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAeEKFKEIKEAY-EVLSDPQKRAaydqygHAA 73
PRK14278 PRK14278
chaperone protein DnaJ; Provisional
 47-106 8.96e-08

chaperone protein DnaJ; Provisional


Pssm-ID: 237654 [Multi-domain]  Cd Length: 378  Bit Score: 53.52  E-value: 8.96e-08
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 153267502  47 REYYRLLNLDEGCSVDDVRESFHKLARQYHPDSGSSDADSATFIKIEEAYRnVLSHAIKR 106
Cdd:PRK14278   3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPDEEAQEKFKEISVAYE-VLSDPEKR 61
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
 46-108 1.74e-07

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 52.58  E-value: 1.74e-07
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 153267502  46 LREYYRLLNLDEGCSVDDVRESFHKLARQYHPDSGSSDADSATFIKIEEAYrNVLSHAIKRMH 108
Cdd:PRK14292   1 MMDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEKGAAEKFAQINEAY-AVLSDAEKRAH 62
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
 47-106 1.98e-07

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 52.50  E-value: 1.98e-07
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 153267502  47 REYYRLLNLDEGCSVDDVRESFHKLARQYHPDSGSSDADS-ATFIKIEEAYRnVLSHAIKR 106
Cdd:PRK14277   5 KDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAeQKFKEINEAYE-ILSDPQKR 64
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
 48-106 4.14e-07

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 51.38  E-value: 4.14e-07
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 153267502  48 EYYRLLNLDEGCSVDDVRESFHKLARQYHPDSGSSDADSAT-FIKIEEAYRnVLSHAIKR 106
Cdd:PRK14284   2 DYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKrFKEVSEAYE-VLSDAQKR 60
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
 47-110 8.36e-07

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 50.58  E-value: 8.36e-07
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 153267502  47 REYYRLLNLDEGCSVDDVRESFHKLARQYHPDSGSSDADSAT-FIKIEEAYRnVLSHAIKRM------HAG 110
Cdd:PRK14281   3 RDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEhFKEVNEAYE-VLSNDDKRRrydqfgHAG 72
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 49-106 8.39e-07

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 50.29  E-value: 8.39e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 153267502   49 YYRLLNLDEGCSVDDVRESFHKLARQYHPDSGSSDADSATFIKIEEAYrNVLSHAIKR 106
Cdd:TIGR02349   2 YYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAY-EVLSDPEKR 58
PRK14289 PRK14289
molecular chaperone DnaJ;
47-110 8.40e-07

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 50.60  E-value: 8.40e-07
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 153267502  47 REYYRLLNLDEGCSVDDVRESFHKLARQYHPDSGSSDADS-ATFIKIEEAYrNVLSHAIKRM------HAG 110
Cdd:PRK14289   5 RDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAeEKFKEAAEAY-DVLSDPDKRSrydqfgHAG 74
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
 47-106 2.43e-06

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 49.16  E-value: 2.43e-06
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 153267502  47 REYYRLLNLDEGCSVDDVRESFHKLARQYHPDSGSSDADSA--TFIKIEEAYRnVLSHAIKR 106
Cdd:PRK14290   3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAeeKFKEISEAYE-VLSDPQKR 63
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
 47-106 3.24e-06

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 48.86  E-value: 3.24e-06
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 153267502  47 REYYRLLNLDEGCSVDDVRESFHKLARQYHPDSGSSDADSATFIKIEEAYrNVLSHAIKR 106
Cdd:PRK14300   3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAEKKFKEINAAY-DVLKDEQKR 61
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
 25-106 7.98e-06

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 47.51  E-value: 7.98e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153267502  25 PGIKMLSDPRSRMISThesqklREYYRLLNLDEGCSVDDVRESFHKLARQYHPDSGssdADSATFIKIEEAYRnVLSHAI 104
Cdd:PTZ00037  12 PGGGFDGGRRKREVDN------EKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKG---GDPEKFKEISRAYE-VLSDPE 81


                 ..
gi 153267502 105 KR 106
Cdd:PTZ00037  82 KR 83
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
 47-106 8.04e-06

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 47.39  E-value: 8.04e-06
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 153267502  47 REYYRLLNLDEGCSVDDVRESFHKLARQYHPDSGSSDADSATFIKIEEAYrNVLSHAIKR 106
Cdd:PRK14276   4 TEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAEEKYKEVQEAY-ETLSDPQKR 62
PRK14293 PRK14293
molecular chaperone DnaJ;
47-101 8.81e-06

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 47.29  E-value: 8.81e-06
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 153267502  47 REYYRLLNLDEGCSVDDVRESFHKLARQYHPD----SGSSDadsaTFIKIEEAYRnVLS 101
Cdd:PRK14293   3 ADYYEILGVSRDADKDELKRAYRRLARKYHPDvnkePGAED----RFKEINRAYE-VLS 56
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
 47-106 1.13e-05

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 47.07  E-value: 1.13e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 153267502  47 REYYRLLNLDEGCSVDDVRESFHKLARQYHPDSGSSDADSATFIKIEEAYRnVLSHAIKR 106
Cdd:PRK14291   3 KDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPEAEEKFKEINEAYQ-VLSDPEKR 61
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
 47-106 1.95e-05

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 46.14  E-value: 1.95e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 153267502  47 REYYRLLNLDEGCSVDDVRESFHKLARQYHPDSGSSDADSATFIK-IEEAYRnVLSHAIKR 106
Cdd:PRK14285   3 RDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKeATEAYE-VLIDDNKR 62
PRK14279 PRK14279
molecular chaperone DnaJ;
47-106 4.14e-05

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 45.11  E-value: 4.14e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 153267502  47 REYYRLLNLDEGCSVDDVRESFHKLARQYHPDSGSSDADSAT-FIKIEEAYrNVLSHAIKR 106
Cdd:PRK14279   9 KDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEErFKAVSEAH-DVLSDPAKR 68
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
 47-106 5.73e-05

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 44.60  E-value: 5.73e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 153267502  47 REYYRLLNLDEGCSVDDVRESFHKLARQYHPDSGSSDADS-ATFIKIEEAYRnVLSHAIKR 106
Cdd:PRK14286   4 RSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESeEKFKEATEAYE-ILRDPKKR 63
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
 47-106 8.56e-05

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 44.37  E-value: 8.56e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 153267502  47 REYYRLLNLDEGCSVDDVRESFHKLARQYHPDSGSSDADSA-TFIKIEEAYrNVLSHAIKR 106
Cdd:PRK14294   4 RDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEeLFKEAAEAY-EVLSDPKKR 63
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
 47-110 9.97e-05

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 43.96  E-value: 9.97e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 153267502  47 REYYRLLNLDEGCSVDDVRESFHKLARQYHPDSGSSDADS-ATFIKIEEAYrNVLSHAIKRM------HAG 110
Cdd:PRK14301   4 RDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAeQKFKEAAEAY-EVLRDAEKRArydrfgHAG 73
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
 45-111 1.06e-04

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 43.78  E-value: 1.06e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 153267502  45 KLREYYRLLNLDEGCSVDDVRESFHKLARQYHPDSGSSDADSATFIKIEEAyRNVLSHAIKRMHAGQ 111
Cdd:PRK14296   2 KKKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEA-ADVLLDKDKRKQYDQ 67
PRK10203 PRK10203
hypothetical protein; Provisional
 200-313 2.97e-04

hypothetical protein; Provisional


Pssm-ID: 182303  Cd Length: 122  Bit Score: 40.41  E-value: 2.97e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 153267502 200 IERLVEDLIQESMAKGDFDNLSGKGKPLkKFSGCSYIDPMTHNLNRILIDNGYQPEWILMQKE---IKDTIEQLREA--- 273
Cdd:PRK10203   4 LDQWAERHILEAQRKGEFDNLPGSGEPL-ILDDDSHVPPELRAGYRLLKNAGCLPPELEQRREaiqLLDLLKGIREDdpq 82

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 153267502 274 -LLMSRKklgnpLSPTEQK-QWAQVCEQF--QEKIRKLNKRIND 313
Cdd:PRK10203  83 yQEVSRR-----LSLLELKlRQAGLSTDFlrGDYADKLLNKIND 121
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
 47-106 3.21e-04

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 42.47  E-value: 3.21e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 153267502  47 REYYRLLNLDEGCSVDDVRESFHKLARQYHPDSGSSDADSA--TFIKIEEAYRnVLSHAIKR 106
Cdd:PRK14282   4 KDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAeqKFKEIQEAYE-VLSDPQKR 64
PRK10266 PRK10266
curved DNA-binding protein;
45-106 8.41e-04

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 40.96  E-value: 8.41e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 153267502  45 KLREYYRLLNLDEGCSVDDVRESFHKLARQYHPD-SGSSDADsATFIKIEEAYRnVLSHAIKR 106
Cdd:PRK10266   2 ELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDvSKEPDAE-ARFKEVAEAWE-VLSDEQRR 62
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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