|
Name |
Accession |
Description |
Interval |
E-value |
| leuS_bact |
TIGR00396 |
leucyl-tRNA synthetase, eubacterial and mitochondrial family; The leucyl-tRNA synthetases ... |
58-900 |
0e+00 |
|
leucyl-tRNA synthetase, eubacterial and mitochondrial family; The leucyl-tRNA synthetases belong to two families so broadly different that they are represented by separate models. This model includes both eubacterial and mitochondrial leucyl-tRNA synthetases. It generates higher scores for some valyl-tRNA synthetases than for any archaeal or eukaryotic cytosolic leucyl-tRNA synthetase. Note that the enzyme from Aquifex aeolicus is split into alpha and beta chains; neither chain is long enough to score above the trusted cutoff, but the alpha chain scores well above the noise cutoff. The beta chain must be found by a model and search designed for partial length matches. [Protein synthesis, tRNA aminoacylation]
Pssm-ID: 273057 [Multi-domain] Cd Length: 842 Bit Score: 847.50 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 58 VEKWWHQQIKEQASRVSEEDKLKPKFYLLSMFPYPSGKLHMGHVRVYTLSDTIARFQKMRGMQVINPMGWDAFGLPAENA 137
Cdd:TIGR00396 6 IEEKWQQKWDENKTFKVTDDSSKPKYYILSMFPYPSGALHMGHVRNYTITDVLSRYYRMKGYNVLHPIGWDAFGLPAENA 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 138 AIERNLHPESWTQSNIKHMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLAYQKEALVNWDPVDQTVLANE 217
Cdd:TIGR00396 86 AIKRGIHPAKWTYENIANMKKQLQALGFSYDWDREIATCDPEYYKWTQWIFLELFEKGLAYVKEADVNWCPNDGTVLANE 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 218 QVNEYGCSWRSGAKVEKKYLRQWFIKTTAYAKAMQDALADLPEWY-GIKGMQAHWIGDCVGCHLDFTLkvdgEDTGEKLT 296
Cdd:TIGR00396 166 QVDSDGRSWRGDTPVEKKELKQWFLKITAYAEELLNDLEELDHWPeSVKEMQRNWIGKSEGVEITFKI----ADHDEKIT 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 297 AYTATPEAIYGISHVAISPSHGLL-HGCSS-------VKKALQK-------ALVPGRDCLTPVMAVSMLTLQEVPIVImA 361
Cdd:TIGR00396 242 VFTTRPDTIFGVTYLALAPEHPLVeKAAENnpkvaafIKKILNKtvaertkATKEKKGVDTGIKAIHPLTGEKIPIWV-A 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 362 NPDLEG-SLDSKIGIPSTSSEDTRLAQALGLPYSEVIEASPD---------GTERLSGSAEFTGMTRQDAFVALTRKARG 431
Cdd:TIGR00396 321 NYVLMEyGTGAVMGVPAHDERDFEFAQKYGLPIKPVIDPAEKdlsltaaytEDGVLVNSGEFNGLNSSEARNAIIDMLEK 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 432 MRVGGHVTSNKLKDWLISRQRYWGTPIPIVHCPACGPVPVPLQDLPVILPSIASLTGRGGSPLATALEWVNCSCPRCKGS 511
Cdd:TIGR00396 401 EGKGKRKVNYRLRDWGFSRQRYWGEPIPIIHCEDGGVVPVPEEDLPVILPEDVVYDGDGGSPLSRIPEWVNVTCPSCGKP 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 512 AKRETDTMDTFVDSAWYYFRYTDPHNTQSPFGSALADFWMPVDLYIGGKEHAVMHLFYARFLSHFCHDQKMVKHREPFHK 591
Cdd:TIGR00396 481 ALRETDTMDTFAGSSWYYLRYLDPKNTDGPFDKEKAEYWLPVDLYIGGIEHAILHLLYARFFHKFLRDIGYVNTKEPFKK 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 592 LLAQGLIKGQTFRlPSGQcLKKEDIDFTGPAPVCAKTKEKLEVTWEKMSKSKHNGVDPEEIVAQYGIDTIRLYILFAAPP 671
Cdd:TIGR00396 561 LINQGMVLGFYYP-PNGK-VPADVLTERDEKGKDKAGGELVYVGYEKMSKSKGNGIDPQEIVESYGADALRLFIMFMGPI 638
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 672 EKDILWDvkTDALPGVLRWQQRLWSLTTRFIEArtsgtvPQPQLLNSKEKTKAQNLWEYK-NAVIAQVTTHFTEDFALNS 750
Cdd:TIGR00396 639 AASLEWN--ESGLEGARRFLDRVWNLVYEITGE------LDAASLTVTALEEAQKELRRDvHKFLKKVTEDLEKRESFNT 710
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 751 VVSQLMGLSSALSQASQRVVLhspefEDALCALLVMAAPLAPHVTSELWAGLTLVPSklcdhyAWDSgvmlQAWPTVDSQ 830
Cdd:TIGR00396 711 AISAMMELLNKLYKAKKEALM-----LEYLKGFVTVLSPFAPHLAEELWEKLGSEPF------IIDN----AKWPVVDET 775
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 831 FLQKpDMVQMAVLINNKACGKIPVPQHVaqDQDKVHELVLQSELGMKLLQGRSIKKAFLSPrTALINFLV 900
Cdd:TIGR00396 776 ALVE-DKTLIVVQVNGKFRAKITVPKDA--DEEQVEELAKQDPEVKKYLENKTIKKVIYVP-GKLVNFVI 841
|
|
| LeuS |
COG0495 |
Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; |
59-900 |
0e+00 |
|
Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis];
Pssm-ID: 223569 [Multi-domain] Cd Length: 814 Bit Score: 744.49 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 59 EKWwhQQI--KEQASRVSEEDKLKPKFYLLSMFPYPSGKLHMGHVRVYTLSDTIARFQKMRGMQVINPMGWDAFGLPAEN 136
Cdd:COG0495 12 EKW--QKRweEAKVFEADEDSDKPEKFYVLVMFPYPSGALHVGHVRNYTIGDVIARYKRMQGYNVLHPMGWDAFGLPAEN 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 137 AAIERNLHPESWTQSNIKHMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLAYQKEALVNWDPVDQTVLAN 216
Cdd:COG0495 90 AAIKIGTDPAKWTYYNIAYMKKQLKSLGFSIDWRREFATCDPEYYKWIQWQFLKLYEKGLAYRKEAPVNWCPVDGTVLAN 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 217 EQVnEYGCSWRSGAKVEKKYLRQWFIKTTAYAKAMQDALADL----PEwyGIKGMQAHWIGDCVGchLDFTLKVDGEDTG 292
Cdd:COG0495 170 EQV-IDGGCWRCGEPVEIKELTQWFFKITDYADELLDDLDKLatlwPE--TVKGMQRNWIGPSEG--YEVAFVVDGEEEI 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 293 EKLTAYTATPEAIYGISHVAISPSHGLLHGCSS----------VKKALQKALV-------PGRDCLTPVMAVSMLTLQEV 355
Cdd:COG0495 245 VSIEVFTTRPDTLFGVTYVVLAPEHPLVGKLVTnpqtplvaefVDECKGTGVVesvpahaEKDGVFLGGYAINPVNGEKI 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 356 PIVImANPDLEGS-LDSKIGIPSTSSEDTRLAQALGLPYSEVI-------EASPDGTERLSGSAEFTGMTRQDAFVALTR 427
Cdd:COG0495 325 PVWI-ANYVLMEYgTGAVMGVPAHDERDLEFATKYKLPIKKVImpegtvgKKVYEGEGVLINSGGLDGLDYEEAKVKIRC 403
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 428 KARGMRVGGHVTSNKLKDWLISRQRYWGTPIPIVHCPACGPVPVPLQDLPVILPSIASLTGrGGSPLATALEWVNCSCPr 507
Cdd:COG0495 404 GLVKRGLGQWFVNYRLRDWLKSRQRYWGEPIPIIHCEDCGVVPVPEDWLPVKLPERVRGLG-TGSPLPWDEEWVIESLP- 481
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 508 cKGSAKRETDTMDTFVDSAWYYFRYTDPHNTQ-SPFGSALADFWMPVDLYIGGKEHAVMHLFYARFLSHFCHDQKMVKHR 586
Cdd:COG0495 482 -DSTAYRETDTMDTFIDSSWYYLRFFDPIFLGeLPFDREEFNYWYPVDLYIGGIEHAVLHLLYFRFFHKALFDEGLVPKD 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 587 EPFHKLLAQGLIkgqtfrlpsgqcLKKEDidftgpapvcaktkeklevtwEKMSKSKHNGVDPEEIVAQYGIDTIRLYIL 666
Cdd:COG0495 561 EPFKKLITQGMV------------LGEEG---------------------EKMSKSKGNVVDPEEAVEKYGADTVRLYIM 607
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 667 FAAPPEKDILWDvkTDALPGVLRWQQRLWSLTTRFIEartsgtvpqpqlLNSKEKTKAQNL---WEYkNAVIAQVTTHFT 743
Cdd:COG0495 608 FAAPPEQDLEWS--ESGVEGARRFLQRVWNLVKEHLE------------KLVEELTKEQGKedrWLL-HRTIKKVTEDFE 672
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 744 EDFALNSVVSQLMGLSSALSQASQRVVLHSPEFEDALCALLVMAAPLAPHVTSELWAGLTLvpsklcdhyawDSGVMLQA 823
Cdd:COG0495 673 ARQTFNTAIAALMELLNALRKYLRRTEGDRKVLREALETWVRLLAPFAPHIAEELWEELGN-----------EGFVSNAP 741
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 23346617 824 WPTVDSQFLqKPDMVQMAVLINNKACGKIPVPqhVAQDQDKVHELVLQSELGMKLLQGRSIKKAFLSPRTaLINFLV 900
Cdd:COG0495 742 WPEPDEEAL-VEDEVEIVVQVNGKVRAREVVA--ADADEEKVKEIALADEEVQKFLQGKTIKKVIAVPGK-PVNIVE 814
|
|
| PLN02563 |
PLN02563 |
aminoacyl-tRNA ligase |
2-891 |
0e+00 |
|
aminoacyl-tRNA ligase
Pssm-ID: 178177 [Multi-domain] Cd Length: 963 Bit Score: 583.32 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 2 ASTCQRLSFYVSPLKRQLVSRPpvilWERlIPGCSRSiySATGKWTKEYTLQTR----KDVEKWWHQQIKE-QASRVSEE 76
Cdd:PLN02563 32 AQTPASASSYFRRSRRGGVSRS----LTR-RAFAAPS--ALTSTTAKTTPAAKRaypfHEIEPKWQRYWEEnRTFRTPDD 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 77 -DKLKPKFYLLSMFPYPSGK-LHMGHVRVYTLSDTIARFQKMRGMQVINPMGWDAFGLPAENAAIERNLHPESWTQSNIK 154
Cdd:PLN02563 105 vDTSKPKFYVLDMFPYPSGAgLHVGHPEGYTATDILARYKRMQGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTLKNIA 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 155 HMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLAYQKEALVNWDPVDQTVLANEQVNEyGCSWRSGAKVEK 234
Cdd:PLN02563 185 RFRSQLKSLGFSYDWDREISTTEPEYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEVVD-GLSERGGHPVIR 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 235 KYLRQWFIKTTAYAKAMQDALADLpEW-YGIKGMQAHWIGDCVGCHLDF-TLKVDGEDTGEKLTAYTATPEAIYGISHVA 312
Cdd:PLN02563 264 KPMRQWMLKITAYADRLLEDLDDL-DWpESIKEMQRNWIGRSEGAELDFsVLDGEGKERDEKITVYTTRPDTLFGATYLV 342
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 313 ISPSHGLLhgcSSVKKALQKALVPG------------RDCL--------TPVMAVSMLTLQEVPIVImANPDLeGSLDSK 372
Cdd:PLN02563 343 VAPEHPLL---SSLTTAEQKEAVEEyvdaasrksdleRTELqkektgvfTGSYAINPATGEAIPIWV-ADYVL-GSYGTG 417
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 373 --IGIPSTSSEDTRLAQALGLPYSEVIeASPDGTERLSGSA---------------EFTGMTRQDAFVALTRKARGMRVG 435
Cdd:PLN02563 418 aiMAVPAHDTRDFEFAQKFDLPIKWVV-KPADGNEDDAEKAytgegvivnssssglDINGLSSKEAAKKVIEWLEETGNG 496
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 436 GHVTSNKLKDWLISRQRYWGTPIPIVHCPACG-PVPVPLQDLPVILPSIASLT--GRGGSPLATALEWVNCSCPRCKGSA 512
Cdd:PLN02563 497 KKKVNYKLRDWLFARQRYWGEPIPVVFLEDSGePVPVPESDLPLTLPELDDFTptGTGEPPLAKAVSWVNTVDPSSGKPA 576
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 513 KRETDTMDTFVDSAWYYFRYTDPHNTQSPFGSALADFWMPVDLYIGGKEHAVMHLFYARFLSHFCHDQKMVKHREPFHKL 592
Cdd:PLN02563 577 RRETNTMPQWAGSCWYYLRFMDPKNSNALVDKEKEKYWMPVDLYVGGAEHAVLHLLYARFWHKVLYDIGVVSTKEPFQCL 656
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 593 LAQGLIKGQ----TFRLPSGQ----------------CLKKEDIDFTGPAPVcAKTKEKLEVTWE--KMSKSKHNGVDPE 650
Cdd:PLN02563 657 VNQGMILGEveytAFKDSDGEyvsadtadrlgelqqeKIPEEKVIKSGDSFV-LKDDPSIRLIARahKMSKSRGNVVNPD 735
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 651 EIVAQYGIDTIRLYILFAAPPEKDILWdvKTDALPGVLRWQQRLWSLTTRfiEARTSGTVPQPQLLNSKEKTKAQNLWEY 730
Cdd:PLN02563 736 DVVSEYGADSLRLYEMFMGPLRDSKTW--STSGVEGVHRFLGRTWRLVVG--APLPDGSFRDGTVVTDEEPSLEQLRLLH 811
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 731 KnaVIAQVTTHfTEDFALNSVVSQLMGLSSALSQASQRVVlhspefeDALCALLVMAAPLAPHVTSELWagltlvpsKLC 810
Cdd:PLN02563 812 K--CIAKVTEE-IESTRFNTAISAMMEFTNAAYKWDKVPR-------EAIEPFVLLLSPYAPHLAEELW--------FRL 873
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 811 DHyawDSGVMLQAWPTVDSQFLqKPDMVQMAVLINNKACGKIPVPqhVAQDQDKVHELVLQSELGMKLLQGRSIKKAFLS 890
Cdd:PLN02563 874 GH---SNSLAYEPWPEANPSYL-VDDTVVLPVQINGKTRGTIEVE--EGCSEDDAFALASQDEKLSKYLDGKEIKKRIYV 947
|
.
gi 23346617 891 P 891
Cdd:PLN02563 948 P 948
|
|
| LeuRS_core |
cd00812 |
catalytic core domain of leucyl-tRNA synthetases; Leucyl tRNA synthetase (LeuRS) catalytic ... |
82-677 |
2.90e-131 |
|
catalytic core domain of leucyl-tRNA synthetases; Leucyl tRNA synthetase (LeuRS) catalytic core domain. This class I enzyme is a monomer which aminoacylates the 2'-OH of the nucleotide at the 3' of the appropriate tRNA. The core domain is based on the Rossman fold and is responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate. It contains the characteristic class I HIGH and KMSKS motifs, which are involved in ATP binding. In Aquifex aeolicus, the gene encoding LeuRS is split in two, just before the KMSKS motif. Consequently, LeuRS is a heterodimer, which likely superimposes with the LeuRS monomer found in most other organisms. LeuRS has an insertion in the core domain, which is subject to both deletions and rearrangements and thus differs between prokaryotic LeuRS and archaeal/eukaryotic LeuRS. This editing region hydrolyzes mischarged cognate tRNAs and thus prevents the incorporation of chemically similar amino acids.
Pssm-ID: 173906 [Multi-domain] Cd Length: 314 Bit Score: 396.23 E-value: 2.90e-131
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 82 KFYLLSMFPYPSGKLHMGHVRVYTLSDTIARFQKMRGMQVINPMGWDAFGLPAENAAIERNLHPESWTQSNIKHMRKQLD 161
Cdd:cd00812 1 KFYILVMFPYPSGALHVGHVRTYTIGDIIARYKRMQGYNVLFPMGFDAFGLPAENAAIKIGRDPEDWTEYNIKKMKEQLK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 162 RLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLAYQKEALVNWDpvdqtvlaneqvneygcswrsgakvekKYLRQWF 241
Cdd:cd00812 81 RMGFSYDWRREFTTCDPEYYKFTQWLFLKLYEKGLAYKKEAPVNWC---------------------------KLLDQWF 133
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 242 IKT--TAYAKAMQDALADLPEWY-GIKGMQAHWIGdcvgchldftlkvdgedtgekltaytatpeaiygishvaispshg 318
Cdd:cd00812 134 LKYseTEWKEKLLKDLEKLDGWPeEVRAMQENWIG--------------------------------------------- 168
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 319 llhgcssvkkalqkalvpgrdcltpvmavsmltlqevpivimanpdlegsldskigipstssedtrlaqalglpysevie 398
Cdd:cd00812 --------------------------------------------------------------------------------
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 399 aspdgterlsgsaeftgmtrqdafvaltrkargmrvgghvtsnklkdwlISRQRYWGTPIPIvhcpacgpvpvplqdlpv 478
Cdd:cd00812 169 -------------------------------------------------CSRQRYWGTPIPW------------------ 181
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 479 ilpsiasltgrggsplatalewvncscprckgsakreTDTMDTFVDSAWYYFRYTDPHNTQSP------FGSALADFWMP 552
Cdd:cd00812 182 -------------------------------------TDTMESLSDSTWYYARYTDAHNLEQPyegdleFDREEFEYWYP 224
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 553 VDLYIGGKEHAVMHLFYARFLSHFCHDQKMVkHREPFHKLLAQGLIKGQTfrlpsgqclkkedidftgpapvcaktkekl 632
Cdd:cd00812 225 VDIYIGGKEHAPNHLLYSRFNHKALFDEGLV-TDEPPKGLIVQGMVLLEG------------------------------ 273
|
570 580 590 600
....*....|....*....|....*....|....*....|....*
gi 23346617 633 evtwEKMSKSKHNGVDPEEIVAQYGIDTIRLYILFAAPPEKDILW 677
Cdd:cd00812 274 ----EKMSKSKGNVVTPDEAIKKYGADAARLYILFAAPPDADFDW 314
|
|
| ValS |
COG0525 |
Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; |
56-845 |
2.92e-70 |
|
Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis];
Pssm-ID: 223599 [Multi-domain] Cd Length: 877 Bit Score: 249.86 E-value: 2.92e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 56 KDVEKWWHQQ-IKEQASRVSEEDKlKPKFYLLSMFPYPSGKLHMGHVRVYTLSDTIARFQKMRGMQVINPMGWDAFGLPA 134
Cdd:COG0525 8 KEIEEKWYKKwEESGYFKPDPNED-KPPFSIDTPPPNVTGSLHMGHALNYTLQDILARYKRMRGYNVLWPPGTDHAGIAT 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 135 ENAaIERNLHPE-----------------SWTQSNIKHMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLA 197
Cdd:COG0525 87 QVV-VEKQLAAEgitrhdlgreeflkkcwEWKEESGGTIREQLRRLGVSVDWSRERFTMDPGLSRAVQEAFVRLYEKGLI 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 198 YQKEALVNWDPVDQTVLANEQVnEYgcswrsgaKVEKKYLrqWFIKttayakamqdaladlpewYGIkgmqahwigdcvg 277
Cdd:COG0525 166 YRGERLVNWCPKCRTAISDIEV-EY--------KEVEGKL--YYIK------------------YPL------------- 203
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 278 chldftlkvdgEDTGEKLTAYTATPEAIYGISHVAISP-----SHglLHGcssvkkalQKALVPgrdcltpvmavsmLTL 352
Cdd:COG0525 204 -----------ADGDGYLVVATTRPETLLGDTAVAVHPdderyKH--LVG--------KEVILP-------------LVG 249
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 353 QEVPIVimANPDLEGSLDS---KIgIPSTSSEDTRLAQALGLPYSEVIEasPDGTERLSGSAEFTGMTRQDA-------- 421
Cdd:COG0525 250 REIPII--ADEYVDPEFGTgavKI-TPAHDFNDYEVGKRHNLPLINIID--EDGRINEEAAGEFAGLDRFEArkkivedl 324
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 422 ----------------------------------FV---ALTRKARGMRVGGHVT-------------SNKLKDWLISRQ 451
Cdd:COG0525 325 eeqgllvkiephkhsvghcercgtpiepllskqwFVkvlELAKKALEAVKDGKIKfvpermekryedwMENIRDWCISRQ 404
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 452 RYWGTPIPIVHCPACGPVPVPlQDLPVILpsiasltgrggsplataleWVNCSCPrcKGSAKRETDTMDTFVDSAWYYFr 531
Cdd:COG0525 405 LWWGHRIPVWYCKECGNVVVA-EEEPEDP-------------------AAAEKCP--KEELEQDEDVLDTWFSSSLWPF- 461
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 532 YTDPHNTQSPFgsaLADFWmPVDLYIGGkeHAVMH--LFYARFLS-HFCHDqkmvkhrEPFHKLLAQGLIKGqtfrlPSG 608
Cdd:COG0525 462 STLGWPEETPD---LKKFY-PTDLLVTG--HDIIFfwVARMIMRGlHLTGE-------VPFKDVYIHGLVRD-----EQG 523
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 609 qclkkedidftgpapvcaktkeklevtwEKMSKSKHNGVDPEEIVAQYGIDTIRLYILFAAPPEKDILWDvkTDALPGVL 688
Cdd:COG0525 524 ----------------------------RKMSKSKGNVIDPLDVIDKYGADALRFTLASLASPGRDINFD--EKRVEGYR 573
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 689 RWQQRLWSLtTRFIEARTSGTVPQPQLLNSKEKTkaqNLWEYK--NAVIAQVTTHFtEDFALNSVVSQLMGL-------- 758
Cdd:COG0525 574 NFLNKLWNA-TRFVLMNLDDLGPDDLDLLALSLA---DRWILSrlNETVKEVTEAL-DNYRFDEAARALYEFiwndfcdw 648
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 759 ----------SSALSQASQRVVLHSpefedALCALLVMAAPLAPHVTSELWAGLTLVPSklcdhyawdsgVMLQAWPTVD 828
Cdd:COG0525 649 ylelakprlyGGEEEKRAARATLYY-----VLDTLLRLLHPFMPFITEEIWQKLPGTES-----------IHLASWPEVD 712
|
890
....*....|....*..
gi 23346617 829 SQFLQKPDMVQMAVLIN 845
Cdd:COG0525 713 EELIDEEAEKEFELLKE 729
|
|
| valS |
PRK13208 |
valyl-tRNA synthetase; Reviewed |
45-828 |
3.27e-61 |
|
valyl-tRNA synthetase; Reviewed
Pssm-ID: 237306 [Multi-domain] Cd Length: 800 Bit Score: 222.76 E-value: 3.27e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 45 KWTKEYTLqtrKDVEKWWhqQIKEQASRV--SEEDKLKPKFYLLSMFPYPSGKLHMGHVRVYTLSDTIARFQKMRGMQVI 122
Cdd:PRK13208 5 ELPKKYDP---EELEEKW--QKIWEEEGTykFDPDERKPVYSIDTPPPTVSGSLHIGHVFSYTHTDFIARYQRMRGYNVF 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 123 NPMGWDAFGLPaenaaIER--------NLHPES----------WTQSNIKHMRKQLDRLGLCFSWDREITTCLPDYYKWT 184
Cdd:PRK13208 80 FPQGWDDNGLP-----TERkvekyygiRKDDISreefielcreLTDEDEKKFRELWRRLGLSVDWSLEYQTISPEYRRIS 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 185 QYLFIKLYEAGLAYQKEALVNWDPVDQTVLANeqvneygcswrsgAKVEKKylrqwfIKTTAYAkamqdaladlpewygi 264
Cdd:PRK13208 155 QKSFLDLYKKGLIYRAEAPVLWCPRCETAIAQ-------------AEVEYR------EREGKLN---------------- 199
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 265 kgmqahwigdcvgcHLDFTLKvdgedTGEKLTAYTATPEAIYGISHVAISPS-----HglLHGcssvkkalQKALVPgrd 339
Cdd:PRK13208 200 --------------YIKFPVE-----DGEEIEIATTRPELLPACVAVVVHPDderykH--LVG--------KTAIVP--- 247
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 340 cltpvmavsmLTLQEVPivIMANPDLE---GSldskiGIPSTSS----EDTRLAQALGLPYSEVIeaSPDGteRLSGSA- 411
Cdd:PRK13208 248 ----------LFGVEVP--ILADPLVDpdfGT-----GAVMICTfgdkTDVTWWRELNLPTRIII--DEDG--RMTEAAg 306
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 412 EFTGMTRQDAfvaltRKA-------RGM---------RVGGH---------VTS------------------NKLK---- 444
Cdd:PRK13208 307 KLAGLTIEEA-----RKKivedlksGGLlgkqepikhNVKFCercdtpleiLVTrqwfikvldlkeellergKEINwype 381
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 445 ---------------DWLISRQRYWGTPIPIVHCPACG-PVPVPLQDLPVilpsiasltgrggSPLATALEWvnCSCPRC 508
Cdd:PRK13208 382 hmrvrlenwieglnwDWCISRQRYFGTPIPVWYCKDCGhPILPDEEDLPV-------------DPTKDEPPG--YKCPQC 446
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 509 -KGSAKRETDTMDTFVDS---AWYYFRYTDPHntqspfgsalaDFWM---PVDLYIGGkehavmH------LFYARFLSH 575
Cdd:PRK13208 447 gSPGFEGETDVMDTWATSsitPLIVTGWERDE-----------DLFEkvfPMDLRPQG------HdiirtwLFYTILRAY 509
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 576 FCHDQKmvkhrePFHKLlaqgLIkgqtfrlpSGQCLkKEDidftGpapvcaktkeklevtwEKMSKSKHNGVDPEEIVAQ 655
Cdd:PRK13208 510 LLTGKL------PWKNI----MI--------SGMVL-DPD----G----------------KKMSKSKGNVVTPEELLEK 550
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 656 YGIDTIRLYILfAAPPEKDILWDVKTdaLPGVLRWQQRLWSLtTRFIEARTSGTVPQPqllnsKEKTKAQNLW--EYKNA 733
Cdd:PRK13208 551 YGADAVRYWAA-SARLGSDTPFDEKQ--VKIGRRLLTKLWNA-SRFVLHFSADPEPDK-----AEVLEPLDRWilAKLAK 621
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 734 VIAQVTTHF-----------TEDFALNS--------VVSQLMGLSSALSQASQRVVLHSpefedALCALLVMAAPLAPHV 794
Cdd:PRK13208 622 VVEKATEALenydfakaleeIESFFWHVfcddylelVKSRAYGEDEEEEQKSARYTLYT-----VLDTLLRLLAPFLPFI 696
|
890 900 910
....*....|....*....|....*....|....
gi 23346617 795 TSELWagltlvpsklcdHYAWDSGVMLQAWPTVD 828
Cdd:PRK13208 697 TEEVW------------SWLYGGSVHRASWPEPD 718
|
|
| valS |
TIGR00422 |
valyl-tRNA synthetase; The valyl-tRNA synthetase (ValS) is a class I amino acyl-tRNA ligase ... |
56-832 |
1.44e-58 |
|
valyl-tRNA synthetase; The valyl-tRNA synthetase (ValS) is a class I amino acyl-tRNA ligase and is particularly closely related to the isoleucyl tRNA synthetase. [Protein synthesis, tRNA aminoacylation]
Pssm-ID: 273070 [Multi-domain] Cd Length: 861 Bit Score: 216.08 E-value: 1.44e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 56 KDVEKWWHQQIKEQASRVSEEDKLKPKFYLLSMFPYPSGKLHMGHVRVYTLSDTIARFQKMRGMQVINPMGWDAFGLPAE 135
Cdd:TIGR00422 8 HEVEKKWYKKWEKSGFFKPDGNSNKPPFCIDIPPPNVTGSLHIGHALNWSIQDIIARYKRMKGYNVLWLPGTDHAGIATQ 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 136 nAAIERNLHPES-----------------WTQSNIKHMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLAY 198
Cdd:TIGR00422 88 -VKVEKKLGAEGktkhdlgreefrekiweWKEESGGTIKNQIKRLGASLDWSRERFTMDEGLSKAVKEAFVRLYEKGLIY 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 199 QKEALVNWDPVDQTVLANEQVnEYgcswrsgakvekkylrqwfikttayaKAMQDALadlpeWYgikgmqahwigdcvgc 278
Cdd:TIGR00422 167 RGEYLVNWDPKLNTAISDIEV-EY--------------------------KEVKGKL-----YY---------------- 198
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 279 hLDFTLKVDGEDtgeKLTAYTATPEAIYGISHVAISP-----SHglLHGcssvkkalQKALVPgrdcltpvmavsmLTLQ 353
Cdd:TIGR00422 199 -IRYPLANGSKD---YLVVATTRPETMFGDTAVAVHPederyKH--LIG--------KKVILP-------------LTGR 251
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 354 EVPIVIMANPDLE-GSLDSKIgIPSTSSEDTRLAQALGLPYSEVIEAspDGTERLSGsAEFTGMTRQDA----------- 421
Cdd:TIGR00422 252 KIPIIADEYVDMEfGTGAVKV-TPAHDFNDYEWGKRHNLEFINILDE--DGLLNENA-GKYQGLTRFEArkkivedlkee 327
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 422 -------------------------------FVA---LTRKARGMRVGGHVT-------------SNKLKDWLISRQRYW 454
Cdd:TIGR00422 328 gllvkiephthnvgtcwrsgtvvepllskqwFVKvekLADKALEAAEEGEIKfvpkrmekrylnwLRNIKDWCISRQLIW 407
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 455 GTPIPIVHCPACGPVPVPLQDLPVILPsiasltgrggSPLATALEWvncscprckgsaKRETDTMDTFVDSAWYYFRYTD 534
Cdd:TIGR00422 408 GHRIPVWYCKECGEVYVAKEEPLPDDK----------TNTGPSVEL------------EQDTDVLDTWFSSSLWPFSTLG 465
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 535 -PHNTqspfgSALADFWmPVDLYIGGKEHAVMHLFYARFLSHFCHDQKmvkhrePFHKLLAQGLIKGQTFRlpsgqclkk 613
Cdd:TIGR00422 466 wPDET-----KDLKKFY-PTDLLVTGYDIIFFWVARMIFRSLALTGQV------PFKEVYIHGLVRDEQGR--------- 524
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 614 edidftgpapvcaktkeklevtweKMSKSKHNGVDPEEIVAQYGIDTIRLYILFAAPPEKDILWDVKTdaLPGVLRWQQR 693
Cdd:TIGR00422 525 ------------------------KMSKSLGNVIDPLDVIEKYGADALRFTLASLVTPGDDINFDWKR--VESARNFLNK 578
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 694 LWSlTTRFIEARTSGtvpQPQLLNSKEKTKAQNLWEYK--NAVIAQVTTHFtEDFALNSVVS------------------ 753
Cdd:TIGR00422 579 LWN-ASRFVLMNLSD---DLELSGGEEKLSLADRWILSklNRTIKEVRKAL-DKYRFAEAAKalyefiwndfcdwyielv 653
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 754 --QLMGLSSALSQASQRVVLHspefedALCALLVMAAPLAPHVTSELWAGLtlvpsklcdHYAWDSgVMLQAWPTVDSQF 831
Cdd:TIGR00422 654 kyRLYNGNEAEKKAARDTLYY------VLDKALRLLHPFMPFITEEIWQHF---------KEGADS-IMLQSYPVVDAEF 717
|
.
gi 23346617 832 L 832
Cdd:TIGR00422 718 V 718
|
|
| ValRS_core |
cd00817 |
catalytic core domain of valyl-tRNA synthetases; Valine amino-acyl tRNA synthetase (ValRS) ... |
90-677 |
2.69e-51 |
|
catalytic core domain of valyl-tRNA synthetases; Valine amino-acyl tRNA synthetase (ValRS) catalytic core domain. This enzyme is a monomer which aminoacylates the 2'-OH of the nucleotide at the 3' of the appropriate tRNA. The core domain is based on the Rossman fold and is responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate. It contains the characteristic class I HIGH and KMSKS motifs, which are involved in ATP binding. ValRS has an insertion in the core domain, which is subject to both deletions and rearrangements. This editing region hydrolyzes mischarged cognate tRNAs and thus prevents the incorporation of chemically similar amino acids.
Pssm-ID: 185677 [Multi-domain] Cd Length: 382 Bit Score: 184.76 E-value: 2.69e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 90 PYPSGKLHMGHVRVYTLSDTIARFQKMRGMQVINPMGWDAFGLPAEN---------AAIERNLHPE-------SWTQSNI 153
Cdd:cd00817 10 PNVTGSLHMGHALNNTIQDIIARYKRMKGYNVLWPPGTDHAGIATQVvvekklgieGKTRHDLGREeflekcwEWKEESG 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 154 KHMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLAYQKEALVNWDPVDQTVLANEQVneygcSWRSGAKVE 233
Cdd:cd00817 90 GKIREQLKRLGASVDWSREYFTMDPGLSRAVQEAFVRLYEKGLIYRDNRLVNWCPKLRTAISDIEV-----CSRSGDVIE 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 234 KKYLRQWFIKTTAYAKAMQDALAD-LPEWYGiKGMQA---HWIgdcvgchldftlkvdgedtgekltaytatpeaiygis 309
Cdd:cd00817 165 PLLKPQWFVKVKDLAKKALEAVKEgDIKFVP-ERMEKryeNWL------------------------------------- 206
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 310 hvaispshgllhgcssvkkalqkalvpgrdcltpvmavsmltlqevpivimanpdlegsldskigipstssedtrlaqal 389
Cdd:cd00817 --------------------------------------------------------------------------------
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 390 glpysevieaspdgterlsgsaeftgmtrqdafvaltrkargmrvgghvtsNKLKDWLISRQRYWGTPIPIVHCPACGPV 469
Cdd:cd00817 207 ---------------------------------------------------ENIRDWCISRQLWWGHRIPAWYCKDGGHW 235
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 470 PVPLQDLPVILPSIasltgrggsplatalewvNCSCPRCKGSA-KRETDTMDTFVDSA-WYYFRYTDPHNTQSpfgsaLA 547
Cdd:cd00817 236 VVAREEDEAIDKAA------------------PEACVPCGGEElKQDEDVLDTWFSSSlWPFSTLGWPEETKD-----LK 292
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 548 DFWmPVDLYIGGKEHAVMHLFYARFLSHFCHDQKmvkhrePFHKLLAQGLIKGqtfrlpsgqclkkEDidftgpapvcak 627
Cdd:cd00817 293 KFY-PTSLLVTGHDIIFFWVARMIMRGLKLTGKL------PFKEVYLHGLVRD-------------ED------------ 340
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|
gi 23346617 628 tkeklevtWEKMSKSKHNGVDPEEIVAQYGIDTIRLYILFAAPPEKDILW 677
Cdd:cd00817 341 --------GRKMSKSLGNVIDPLDVIDGYGADALRFTLASAATQGRDINL 382
|
|
| tRNA-synt_1 |
pfam00133 |
tRNA synthetases class I (I, L, M and V); Other tRNA synthetase sub-families are too ... |
60-678 |
5.80e-34 |
|
tRNA synthetases class I (I, L, M and V); Other tRNA synthetase sub-families are too dissimilar to be included.
Pssm-ID: 395082 [Multi-domain] Cd Length: 603 Bit Score: 138.70 E-value: 5.80e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 60 KWWHQQIKEQASRvsEEDKLKPKFYLLSMFPYPSGKLHMGHVRVYTLSDTIARFQKMRGMQVINPMGWDAFGLPAEnAAI 139
Cdd:pfam00133 4 EFWDEIGYFKPEL--EKRKGKPSFTLHDGPPNATGSLHMGHALAKTLKDIVIRYKRMQGYYVLWVPGWDHHGLPIE-QVV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 140 ERNLHPE------------------SWTQSNIKHMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLAYQKE 201
Cdd:pfam00133 81 EKKLGIKegkdrhkygreefrekcrEWKMEYADEIRKQFRRLGRSIDWDREYFTMDPELEAAVWEVFVRLHDKGLIYRGK 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 202 ALVNWDPVDQTVLANEQVnEYgcswrsgakvekkylrqwfikttayaKAMQDALAdlpewygikgmqahwigdcvgcHLD 281
Cdd:pfam00133 161 KPVNWSPALNTALSNAEV-EY--------------------------KDVKGPSI----------------------HVA 191
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 282 FTLKvDGEDTgeKLTAYTATPEAIYGISHVAISP-------SHGLLHGCSSVKKALQKALVPGRDCLTP-------VMAV 347
Cdd:pfam00133 192 FPLA-DDKDA--SLVIWTTTPWTLPGNTAIAVNPefdyvitGEGLILAEALLKSLYKKEKTDYKILEDFrgkelegKEAI 268
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 348 SMLTLQEVPIVIMANPDLE-GSLDSKIGiPSTSSEDTRLAQALGLPYSEVIEASPDGTErlsGSAEFTGMTRQDAFVALT 426
Cdd:pfam00133 269 HPFVNREIPIITDDYVDMDfGTGAVHTA-PAHGEDDYEVGQRHNLEVINPVDDDGTFTE---EAPDFQGMYRFDARKKVV 344
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 427 R--KARGMRVggHVTSNKLK--------------------------------------------------------DWLI 448
Cdd:pfam00133 345 EllTEKGLLL--KIEPFTHSypfcwrsgtpiipratpqwfvrmdelrddaleavekvqfvpksgekryfnwlrniqDWCI 422
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 449 SRQRYWGTPIPIVHCPACGPVpVPLQDLPVIlpsIASLTGRGGSPLATALEWVNCScPRCKGSAKRETDTMDTFVDSA-W 527
Cdd:pfam00133 423 SRQRWWGHPIPAWYSEDTEEV-VCRGELVEL---VAGRFEEEGSIKWLHREAKDKS-GSGKGTLEQDEDVLDTWFSSGsW 497
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 528 YYFRYTDPHNTQSPFgsalaDFWMPVDLYIGGKEhavMHLFYarFLSHFCHDQKMVKhREPFHKLLAQGLIkgqtfRLPS 607
Cdd:pfam00133 498 PFSVLGWPFENTEEF-----KKFFPADMLLEGSD---QTRGW--FYRMIMLSTALTG-SVPYKNVLVHGLV-----RDEQ 561
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 23346617 608 GQclkkedidftgpapvcaktkeklevtweKMSKSKHNGVDPEEIVAQYGIDTIRLYILFaAPPEKDILWD 678
Cdd:pfam00133 562 GR----------------------------KMSKSLGNVIDPLDVIDKYGADALRLWLAN-SDYGRDINLS 603
|
|
| IleS |
COG0060 |
Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; |
58-831 |
3.61e-33 |
|
Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis];
Pssm-ID: 223138 [Multi-domain] Cd Length: 933 Bit Score: 138.11 E-value: 3.61e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 58 VEKWWHQQIKEQasRVSEEDKLKPKFYLLSMFPYPSGKLHMGHVRVYTLSDTIARFQKMRGMQVINPMGWDAFGLPAENA 137
Cdd:COG0060 28 LKFWEENDIYEK--IREERNKGKPKFVLHDGPPYANGNIHIGHALNKILKDIIVRYKTMQGYDVPYVPGWDCHGLPIELK 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 138 AI----------------ERNLHPESWTQSNIKHMRKQLDRLGLCFSWDREITTCLPDY--YKWtqYLFIKLYEAGLAYQ 199
Cdd:COG0060 106 VEkklgigkkdiesfgveEFREKCREFALEQVDEQKEQFKRLGVWGDWENPYKTMDPSYeeSVW--WAFKELYEKGLLYR 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 200 KEALVNWDPVDQTVLANEQVnEYGcswrsgakvEKKylrqwfiKTTAYAKamqdaladlpewygikgmqahwigdcvgch 279
Cdd:COG0060 184 GYKPVPWSPRCETALAEAEV-EYG---------DVK-------DPSIYVK------------------------------ 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 280 ldFTLKVDGEDTGEKLTAYTATPEAIYgiSHVAIspshgllhgcsSVKKALQKALVP--------GRDCLTPVMAVSMLT 351
Cdd:COG0060 217 --FPVKDEGLDENAYLVIWTTTPWTLP--ANLAI-----------AVHPDLDYVLVEvngeklilAKALVESVAKKAGVE 281
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 352 LQEVpIVIMANPDLEG------------------------SLDSKIGI----PSTSSEDTRLAQALGLP----------- 392
Cdd:COG0060 282 DYEV-LETFKGSELEGlryehpfydfvydrafpvilgdhvTLDDGTGLvhtaPGHGEEDYEVGKKYGLLevlnpvddngr 360
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 393 YSE---------VIEASPDGTERL--------SGSAE---------------------FTGMT--RQDAFVALTR----- 427
Cdd:COG0060 361 YTEeapkyeglfVKDANKKIIEDLkekgnllkSEKIEhsyphcwrtktpliyratpqwFVSVDklRDKMLKEINKvnwvp 440
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 428 -KARGmRVGGHVtsNKLKDWLISRQRYWGTPIPIVHCPACGPVPVPLQDLpviLPSIASLTGRGGSplaTAL--EWVNC- 503
Cdd:COG0060 441 dWGKN-RFGNMV--ENRPDWCISRQRYWGVPIPVWYCKETGEILVITEEL---EELVGQLVEEKGI---DDWhrPDIDEl 511
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 504 --SCPRCKGSAKRETDTMDTFVDSawyyfrytdphntqspfGSAladFWmpvdlyiggkehAVMHLF----YARFLSHFC 577
Cdd:COG0060 512 lpPCPEDGKEYRRVPDVLDVWFDS-----------------GST---PY------------AVLHPRenlkFPALFADFY 559
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 578 ---HDQkmvkHREPFHKLLAQGLIkgqTF-RLPSGQCLKkedIDFTgpapvcaktkekLEVTWEKMSKSKHNGVDPEEIV 653
Cdd:COG0060 560 legSDQ----TRGWFYSSLLTSTA---LFgRAPYKNVLT---HGFV------------LDEKGRKMSKSLGNVVDPQDVI 617
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 654 AQYGIDTIRLYILFAAPPE-----KDILWDVKTdalpgVLRwqqRLWsLTTRFIEARTSGTVPQPQLLnSKEKTKAQNLW 728
Cdd:COG0060 618 DKYGADILRLWVASSDYWEdlrfsDEILKQVRE-----VYR---KIR-NTYRFLLGNLDDFDPKKDAV-LPEELRELDRW 687
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 729 --EYKNAVIAQVTTHFtEDFALNSVVSQLMG-----LSS----------------ALSQASQRVVLHspefeDALCALLV 785
Cdd:COG0060 688 ilSRLNSLVKEVREAY-ENYDFHKVVRALMNfvsedLSNwyldiikdrlyteaadSPDRRAAQTTLY-----HILKALVR 761
|
890 900 910 920
....*....|....*....|....*....|....*....|....*.
gi 23346617 786 MAAPLAPHVTSELWAGLTlvpsklcdHYAWDSGVMLQAWPTVDSQF 831
Cdd:COG0060 762 LLAPILPFTAEEIWQNLP--------GERKEESVHLEDWPEVDEEL 799
|
|
| ileS |
TIGR00392 |
isoleucyl-tRNA synthetase; The isoleucyl tRNA synthetase (IleS) is a class I amino acyl-tRNA ... |
60-839 |
7.55e-33 |
|
isoleucyl-tRNA synthetase; The isoleucyl tRNA synthetase (IleS) is a class I amino acyl-tRNA ligase and is particularly closely related to the valyl tRNA synthetase. This model may recognize IleS from every species, including eukaryotic cytosolic and mitochondrial forms. [Protein synthesis, tRNA aminoacylation]
Pssm-ID: 273054 [Multi-domain] Cd Length: 861 Bit Score: 136.74 E-value: 7.55e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 60 KWWHQQIKEqasRVSEEDKLKPKFYLLSMFPYPSGKLHMGHVRVYTLSDTIARFQKMRGMQVINPMGWDAFGLPAENAaI 139
Cdd:TIGR00392 18 FWQENDIFE---KVKKLNKGKPEFIFHDGPPYANGSIHLGHALNKILKDIILRYKTMQGFNVTRKPGWDTHGLPIEHK-V 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 140 ERNLhpeSWTQ---------------------SNIKHMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLAY 198
Cdd:TIGR00392 94 EKKL---GISGkkeissleieefrekcrefalKQIEEQREQFQRLGVWGDWENPYKTMDPSYEESQWWLFKEAHEKGLLY 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 199 QKEALVNWDPVDQTVLANEQVNEYGCSWR-----------------SGAKVEKKYLRQWfikTTA--------------- 246
Cdd:TIGR00392 171 RGLKPVYWSPRCRTALAEAEVEYKENYKDvkdpsiyvkfpvkkdkkTYLKVKLSSLLIW---TTTpwtlpsnlaiavhpd 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 247 --YAKAMQD--------ALADLPEWYGIKGMQAHWIGDCVGCHLD---FTLKVDGEDTGEKLTAYTA------TPEAIYG 307
Cdd:TIGR00392 248 feYALVQDNtkveyfilAKKLVEKLYNKAGSDYEIIKTFKGSDLEgleYEHPLYDFVSQLKEGAPVViggdhvTTEDGTG 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 308 ISHvaISPSHGLLHGCSSVKKALqkalvpgrDCLTPVMAVSMLTLQEVPIVIMANPDLEGSLDSKIGIPSTSSEDTRLaq 387
Cdd:TIGR00392 328 IVH--TAPGHGEEDYEIGKKYGL--------EVLSPVDEKGVYTEGVNDFQGRFVKDADKDIIKANKIIIEQLKDKGL-- 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 388 algLPYSEVIE----------------ASPDGTERLSGSAEftGMTRQDAFVALTRKARGMRVGGHVTSNKlkDWLISRQ 451
Cdd:TIGR00392 396 ---LLKAEKIThsyphcwrtktpviyrATEQWFIKTKDIKD--QMLEQIKKVNWVPEWGEGRFGNWLENRP--DWCISRQ 468
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 452 RYWGTPIPIVHCPACGPvpvplqdlPVILPSIASL------TGRGGSPLATA---LEWVNCSCPRCkGSAKRETDTMDTF 522
Cdd:TIGR00392 469 RYWGIPIPIWYCEDTGE--------PIVVGSIEELielielKGIDAWFEDLHrdfLDKITLKSGDG-GEYRRVPDVLDVW 539
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 523 VDS--AWyyfrYTDPHNtqsPFGSALADFWMPVDLYIGGkehavmhlfyarflshfcHDQkmvkHREPFHKLLAQGLIkg 600
Cdd:TIGR00392 540 FDSgsMP----YASIHY---PFENEKFKEVFPADFILEG------------------SDQ----TRGWFYSSLAIGTA-- 588
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 601 QTFRLPSGQCLKKediDFTgpapvcaktkekLEVTWEKMSKSKHNGVDPEEIVAQYGIDTIRLYILFAAPpekdilWD-- 678
Cdd:TIGR00392 589 LFGQAPYKNVITH---GFT------------LDEKGRKMSKSLGNVVDPLKVINKYGADILRLYVASSDP------WEdl 647
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 679 -VKTDALPGVLRWQQRLWSLTTRFI--EARTSGTVPQPQLLnSKEKTKAQNLW--EYKNAVIAQVTTHFtEDFALNSVVS 753
Cdd:TIGR00392 648 rFSDEILKQVVEKYRKIRWNTYRFLltYANLDKFDPLFNSV-AVEKFPEEDRWilSRLNSLVEEVNEAL-EKYNFHKVLR 725
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 754 QLMG-----LSS----------------ALSQASQRVVLHspefedALCALLVMAAPLAPHVTSELWAGLTLVPSKlcdh 812
Cdd:TIGR00392 726 ALQDfiveeLSNwyiriirdrlyceakdNDKRAAQTTLYY------ALLTLVRLLAPFLPHTAEEIYQNLPGGEEE---- 795
|
890 900 910
....*....|....*....|....*....|..
gi 23346617 813 yawdSGVMLQAWPTVDSQFL-----QKPDMVQ 839
Cdd:TIGR00392 796 ----ESVHLNLWPEVDEEFIdealeANMAIVR 823
|
|
| Ile_Leu_Val_MetRS_core |
cd00668 |
catalytic core domain of isoleucyl, leucyl, valyl and methioninyl tRNA synthetases; Catalytic ... |
82-677 |
5.11e-30 |
|
catalytic core domain of isoleucyl, leucyl, valyl and methioninyl tRNA synthetases; Catalytic core domain of isoleucyl, leucyl, valyl and methioninyl tRNA synthetases. These class I enzymes are all monomers. However, in some species, MetRS functions as a homodimer, as a result of an additional C-terminal domain. These enzymes aminoacylate the 2'-OH of the nucleotide at the 3' of the appropriate tRNA. The core domain is based on the Rossman fold and is responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate. It contains the characteristic class I HIGH and KMSKS motifs, which are involved in ATP binding. Enzymes in this subfamily share an insertion in the core domain, which is subject to both deletions and rearrangements. This editing region hydrolyzes mischarged cognate tRNAs and thus prevents the incorporation of chemically similar amino acids. MetRS has a significantly shorter insertion, which lacks the editing function.
Pssm-ID: 185674 [Multi-domain] Cd Length: 312 Bit Score: 121.37 E-value: 5.11e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 82 KFYLLSMFPYPSGKLHMGHVRVYTLSDTIARFQKMRGMQVINPMGWDAFGLPAENAA-------------IERNLHPESW 148
Cdd:cd00668 1 KFYVTTPPPYANGSLHLGHALTHIIADFIARYKRMRGYEVPFLPGWDTHGLPIELKAerkggrkkktiwiEEFREDPKEF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 149 TQSNIKHMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLAYQKEalvnwdpvdqtvlaneqvneygcswRS 228
Cdd:cd00668 81 VEEMSGEHKEDFRRLGISYDWSDEYITTEPEYSKAVELIFSRLYEKGLIYRGT-------------------------HP 135
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 229 GAKVEkkylrQWFIKTTAYAKAMQDAL---ADLPEWYGIKgMQAhWIGDcvgchldftlkvdgedtgekltaytatpeai 305
Cdd:cd00668 136 VRITE-----QWFFDMPKFKEKLLKALrrgKIVPEHVKNR-MEA-WLES------------------------------- 177
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 306 ygishvaispshgllhgcssvkkalqkalvpgrdcltpvmavsmltlqevpivimanpdlegsldskigipstssedtrl 385
Cdd:cd00668 --------------------------------------------------------------------------------
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 386 aqalglpysevieaspdgterlsgsaeftgmtrqdafvaltrkargmrvgghvtsnkLKDWLISRQRYWGTPIPivhcpa 465
Cdd:cd00668 178 ---------------------------------------------------------LLDWAISRQRYWGTPLP------ 194
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 466 cgpvpvplqdlpvilpsiasltgrggsplatalewvncscprckgsakreTDTMDTFVDSAWYYFRYTDphntqSPFGSA 545
Cdd:cd00668 195 --------------------------------------------------EDVFDVWFDSGIGPLGSLG-----YPEEKE 219
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 546 LADFWMPVDLYIGGKEHAVMHLFYARFLShfchdqKMVKHREPFHKLLAQGLIKGqtfrlPSGQclkkedidftgpapvc 625
Cdd:cd00668 220 WFKDSYPADWHLIGKDILRGWANFWITML------VALFGEIPPKNLLVHGFVLD-----EGGQ---------------- 272
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|..
gi 23346617 626 aktkeklevtweKMSKSKHNGVDPEEIVAQYGIDTIRLYILFAAPPEKDILW 677
Cdd:cd00668 273 ------------KMSKSKGNVIDPSDVVEKYGADALRYYLTSLAPYGDDIRL 312
|
|
| valS |
PRK05729 |
valyl-tRNA synthetase; Reviewed |
94-831 |
1.37e-27 |
|
valyl-tRNA synthetase; Reviewed
Pssm-ID: 235582 [Multi-domain] Cd Length: 874 Bit Score: 120.21 E-value: 1.37e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 94 GKLHMGHVRVYTLSDTIARFQKMRGMQVInpmgWdafgLP-------AENAAIERNLHPES-----------------WT 149
Cdd:PRK05729 49 GSLHMGHALNNTLQDILIRYKRMQGYNTL----W----LPgtdhagiATQMVVERQLAAEGksrhdlgrekflekvweWK 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 150 QSNIKHMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLAYQKEALVNWDPVDQTVLANEQVnEYgcswrsg 229
Cdd:PRK05729 121 EESGGTITNQLRRLGASCDWSRERFTMDEGLSKAVREVFVRLYEKGLIYRGKRLVNWDPKLQTALSDLEV-EY------- 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 230 aKVEKKYLrqWFIKttayakamqdaladlpewYGIkgmqahwigdcvgchldftlkvdgEDTGEKLTAYTATPEAIYGIS 309
Cdd:PRK05729 193 -KEVKGKL--WHIR------------------YPL------------------------ADGSDYLVVATTRPETMLGDT 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 310 HVAISPS-----HglLHGcssvkkalQKALVPgrdcltpvmavsmLTLQEVPIVIMANPDLE---GSLdsKIgipsTSSE 381
Cdd:PRK05729 228 AVAVNPEderykH--LIG--------KTVILP-------------LVGREIPIIADEYVDPEfgtGAV--KI----TPAH 278
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 382 DT---RLAQALGLPYSEVIeaSPDGTERLSGsAEFTGMTRqdaFVAltRKA-------------------------RG-- 431
Cdd:PRK05729 279 DPndfEVGKRHNLPMINIM--DEDGTINENP-GEYQGLDR---FEA--RKAivadleelgllvkiephthsvghsdRSgv 350
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 432 -------------M-----RVGGHVTS------------------NKLKDWLISRQRYWGTPIPIVHCPAcGPVPVPLQD 475
Cdd:PRK05729 351 viepylsdqwfvkMkplakPALEAVENgeikfvperwektyfhwmENIQDWCISRQLWWGHRIPAWYDED-GEVYVGREE 429
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 476 LpvilpsiasltgrggsplatalewvncsCPRCKGSAKRETDTMDTFVDSA--------WyyfrytdPHNTQspfgsALA 547
Cdd:PRK05729 430 P----------------------------EAREKALLTQDEDVLDTWFSSAlwpfstlgW-------PEKTE-----DLK 469
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 548 DFWmPVDLYIGGkehavmH--LFY--AR--FLSHFCHDQKmvkhrePFHKLLAQGLI---KGQtfrlpsgqclkkedidf 618
Cdd:PRK05729 470 RFY-PTSVLVTG------FdiIFFwvARmiMMGLHFTGQV------PFKDVYIHGLVrdeQGR----------------- 519
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 619 tgpapvcaktkeklevtweKMSKSKHNGVDPEEIVAQYGIDTIRLYILFAAPPEKDILWDVKtdalpgvlRWQQ------ 692
Cdd:PRK05729 520 -------------------KMSKSKGNVIDPLDLIDKYGADALRFTLAALASPGRDIRFDEE--------RVEGyrnfan 572
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 693 RLWSlTTRFIEARTSGTVPqPQLLNSKEKTKAqNLW---EYkNAVIAQVTTHFtEDFALNSVVSQLMG------------ 757
Cdd:PRK05729 573 KLWN-ASRFVLMNLEGADV-GELPDPEELSLA-DRWilsRL-NRTVAEVTEAL-DKYRFDEAARALYEfiwnefcdwyle 647
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 23346617 758 -----LSSALSQASQRVVLHspefedALCALLVMAAPLAPHVTSELWAGLTlvpsklcdHYAWDSGVMLQAWPTVDSQF 831
Cdd:PRK05729 648 lakpvLQEAAKRATRATLAY------VLEQILRLLHPFMPFITEELWQKLA--------PLGIEESIMLAPWPEADEAI 712
|
|
| MetG |
COG0143 |
Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; |
77-272 |
2.39e-24 |
|
Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis];
Pssm-ID: 223221 [Multi-domain] Cd Length: 558 Bit Score: 108.52 E-value: 2.39e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 77 DKLKPKFYLLSMFPYPSGKLHMGHVRVYTLSDTIARFQKMRGMQVINPMGWDAFGLPAENAAIERNLHPESWTQSNIKHM 156
Cdd:COG0143 1 MKMMKKILVTTALPYPNGPPHLGHLYTYLAADVYARYLRLRGYEVFFLTGTDEHGTKIELKAEKEGITPQELVDKNHEEF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 157 RKQLDRLGLcfSWDREITTCLPDYYKWTQYLFIKLYEAGLAYQKEALVNWDPVDQTVLANEQV---------------NE 221
Cdd:COG0143 81 KELFKALNI--SFDNFIRTTSPEHKELVQEFFLKLYENGDIYLREYEGLYCVSCERFLPDRYVegtcpkcggedargdQC 158
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 23346617 222 YGC-------------SWRSGAKVEKKYLRQWFIKTTAYAKAMQDALADLPEWYGIKGMQAHWI 272
Cdd:COG0143 159 ENCgrtldptelinpvCVISGATPEVREEEHYFFRLSKFQDKLLEWYESNPDFIWPANRRNEVL 222
|
|
| Anticodon_Ia_Leu_BEm |
cd07958 |
Anticodon-binding domain of bacterial and eukaryotic mitochondrial leucyl tRNA synthetases; ... |
677-802 |
3.64e-24 |
|
Anticodon-binding domain of bacterial and eukaryotic mitochondrial leucyl tRNA synthetases; This domain is found in leucyl tRNA synthetases (LeuRS), which belong to the class Ia aminoacyl tRNA synthetases. It lies C-terminal to the catalytic core domain. In contrast to other class Ia enzymes, the anticodon is not used as an identity element in LeuRS (with exceptions such as Saccharomyces cerevisiae and some other eukaryotes). No anticodon-binding site can be defined for this family, which includes bacterial and eukaryotic mitochondrial members, as well as LeuRS from the archaeal Halobacteria. LeuRS catalyzes the transfer of leucine to the 3'-end of its tRNA.
Pssm-ID: 153412 [Multi-domain] Cd Length: 117 Bit Score: 98.06 E-value: 3.64e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 677 WDvkTDALPGVLRWQQRLWSLTTRFIEARTSGTVPQpqllnsKEKTKAQNLWEYKNAVIAQVTTHFtEDFALNSVVSQLM 756
Cdd:cd07958 1 WS--DSGVEGAYRFLNRVWRLVTELAEALAAPAAAA------ELSEEDKELRRKLHKTIKKVTEDI-ERLRFNTAIAALM 71
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 23346617 757 GLSSALSQASQRVVLHSPEFEDALCALLVMAAPLAPHVTSELWAGL 802
Cdd:cd07958 72 ELVNALYKYKKKDAQHAAVLREALETLVLLLAPFAPHIAEELWEEL 117
|
|
| MetRS_core |
cd00814 |
catalytic core domain of methioninyl-tRNA synthetases; Methionine tRNA synthetase (MetRS) ... |
82-261 |
8.90e-23 |
|
catalytic core domain of methioninyl-tRNA synthetases; Methionine tRNA synthetase (MetRS) catalytic core domain. This class I enzyme aminoacylates the 2'-OH of the nucleotide at the 3' of the appropriate tRNA. MetRS, which consists of the core domain and an anti-codon binding domain, functions as a monomer. However, in some species the anti-codon binding domain is followed by an EMAP domain. In this case, MetRS functions as a homodimer. The core domain is based on the Rossman fold and is responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate. It contains the characteristic class I HIGH and KMSKS motifs, which are involved in ATP binding. As a result of a deletion event, MetRS has a significantly shorter core domain insertion than IleRS, ValRS, and LeuR. Consequently, the MetRS insertion lacks the editing function.
Pssm-ID: 173907 [Multi-domain] Cd Length: 319 Bit Score: 100.30 E-value: 8.90e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 82 KFYLLSMFPYPSGKLHMGHVRVYTLSDTIARFQKMRGMQVINPMGWDAFGLPAENAAIERNLHPESWTQSNIKHMRKQLD 161
Cdd:cd00814 1 KVLITTALPYVNGVPHLGHLYGTVLADVFARYQRLRGYDVLFVTGTDEHGTKIEQKAEEEGVTPQELCDKYHEIFKDLFK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 162 RLGlcFSWDREITTCLPDYYKWTQYLFIKLYEAGLAYQKEALVNWDPVDQTVLAneqvneygcswrsgakvEKKYLRQWF 241
Cdd:cd00814 81 WLN--ISFDYFIRTTSPRHKEIVQEFFKKLYENGYIYEGEYEGLYCVSCERFLP-----------------EWREEEHYF 141
|
170 180
....*....|....*....|
gi 23346617 242 IKTTAYAKAMQDALADLPEW 261
Cdd:cd00814 142 FRLSKFQDRLLEWLEKNPDF 161
|
|
| valS |
PRK14900 |
valyl-tRNA synthetase; Provisional |
56-829 |
1.34e-20 |
|
valyl-tRNA synthetase; Provisional
Pssm-ID: 237855 [Multi-domain] Cd Length: 1052 Bit Score: 97.76 E-value: 1.34e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 56 KDVEKWWHQQIKEQAS-RVSEEDKLKPKFYLLSMFPYPSGKLHMGHVRVYTLSDTIARFQKMRGMQVINPMGWDAFGLpA 134
Cdd:PRK14900 22 REVEARWYPFWQERGYfHGDEHDRTRPPFSIVLPPPNVTGSLHLGHALTATLQDVLIRWKRMSGFNTLWLPGTDHAGI-A 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 135 ENAAIERNLHPE------------------SWTQSNIKHMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGL 196
Cdd:PRK14900 101 TQMIVEKELKKTekksrhdlgreaflervwAWKEQYGSRIGEQHKALGASLDWQRERFTMDEGLSRAVREVFVRLHEEGL 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 197 AYQKEALVNWDPVDQTVLANEQVN----EYGCSWrSGAKVEKKYLRQWFIKTTAYAKAMQD-ALADLPEwygikgmqAHW 271
Cdd:PRK14900 181 IYREKKLINWCPDCRTALSDLEVEheeaHQGELW-SFAYPLADGSGEIVVATTRPETMLGDtAVAVHPL--------DPR 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 272 IGDCVGCHLdfTLKVDGEDTGEKLTAYTATPEaiYGISHVAISPSH-------GLLHGcssvkkaLQKALVPGRDCLTPV 344
Cdd:PRK14900 252 YMALHGKKV--RHPITGRTFPIVADAILVDPK--FGTGAVKVTPAHdfndfevGKRHG-------LEMITVIGPDGRMTA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 345 MAVSMLTL------QEVPIVIMANPDLEGSLDSKIGIPSTSSEDTRLAQALGLPYSEVIE--ASPDGTERLSGSAEFTGM 416
Cdd:PRK14900 321 EAGPLAGLdrfearKEVKRLLAEQGLDRGAKPHVLPLGRCQRSATILEPLLSDQWYVRIEplARPAIEAVEQGRTRFIPE 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 417 TRQDAFVALTRkargmrvgghvtsnKLKDWLISRQRYWGTPIPIVHCPACGPVPVPLQdlpvilPSiasltgrggsplat 496
Cdd:PRK14900 401 QWTNTYMAWMR--------------NIHDWCISRQLWWGHQIPAWYCPDGHVTVARET------PE-------------- 446
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 497 alewvncSCPRCKGSAKRE-TDTMDTFVDSA-WYYFRYTDPHNTQSpfgsaLADFWmPVDLYIGGkeHAVMHLFYARFLS 574
Cdd:PRK14900 447 -------ACSTCGKAELRQdEDVLDTWFSSGlWPFSTMGWPEQTDT-----LRTFY-PTSVMETG--HDIIFFWVARMMM 511
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 575 ---HFCHDQkmvkhrePFHKLLAQGLIKgqtfrlpsgqclkkediDFTGpapvcaktkeklevtwEKMSKSKHNGVDPEE 651
Cdd:PRK14900 512 mglHFMGEV-------PFRTVYLHPMVR-----------------DEKG----------------QKMSKTKGNVIDPLV 551
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 652 IVAQYGIDTIRLYILFAAPPEKDIlwDVKTDALPGVLRWQQRLW-------------------------SLTTRFIEART 706
Cdd:PRK14900 552 ITEQYGADALRFTLAALTAQGRDI--KLAKERIEGYRAFANKLWnasrfalmnlsgyqergedparlarTPADRWILARL 629
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 707 SGTVPQpqllnSKEKTKAQNLWEYKNAVIAQVTTHFTeDFALNSVVSQLMGLSSALSQASQRVVLHSpefedaLCALLVM 786
Cdd:PRK14900 630 QRAVNE-----TVEALEAFRFNDAANAVYAFVWHELC-DWYIELAKEALASEDPEARRSVQAVLVHC------LQTSYRL 697
|
810 820 830 840
....*....|....*....|....*....|....*....|...
gi 23346617 787 AAPLAPHVTSELWAGLTLVPSKlcdhYAWDSGVMLQAWPTVDS 829
Cdd:PRK14900 698 LHPFMPFITEELWHVLRAQVGA----SAWADSVLAAEYPRKGE 736
|
|
| IleRS_core |
cd00818 |
catalytic core domain of isoleucyl-tRNA synthetases; Isoleucine amino-acyl tRNA synthetases ... |
81-675 |
9.64e-19 |
|
catalytic core domain of isoleucyl-tRNA synthetases; Isoleucine amino-acyl tRNA synthetases (IleRS) catalytic core domain . This class I enzyme is a monomer which aminoacylates the 2'-OH of the nucleotide at the 3' of the appropriate tRNA. The core domain is based on the Rossman fold and is responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate. It contains the characteristic class I HIGH and KMSKS motifs, which are involved in ATP binding. IleRS has an insertion in the core domain, which is subject to both deletions and rearrangements. This editing region hydrolyzes mischarged cognate tRNAs and thus prevents the incorporation of chemically similar amino acids.
Pssm-ID: 173909 [Multi-domain] Cd Length: 338 Bit Score: 88.44 E-value: 9.64e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 81 PKFYLLSMFPYPSGKLHMGHVRVYTLSDTIARFQKMRGMQVINPMGWDAFGLPAENAA----------IERNLHPE---- 146
Cdd:cd00818 1 PEFVFHDGPPYANGLPHYGHALNKILKDIINRYKTMQGYYVPRRPGWDCHGLPIELKVekelgisgkkDIEKMGIAefna 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 147 ---SWTQSNIKHMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLAYQKEALVNWdPVDQtvlaneqvneyg 223
Cdd:cd00818 81 kcrEFALRYVDEQEEQFQRLGVWVDWENPYKTMDPEYMESVWWVFKQLHEKGLLYRGYKVVPW-PLIY------------ 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 224 cswrsgakvekKYLRQWFIKTTAYAKAMQDALadlpewygikgMQAHWIgdcvgchldftlkvdgedtgekltaytatpe 303
Cdd:cd00818 148 -----------RATPQWFIRVTKIKDRLLEAN-----------DKVNWI------------------------------- 174
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 304 aiygishvaisPSHGllhgcssvkkalqkalvpgrdcltpvmavsmltlqevpivimanpdlegsldskigipstssedt 383
Cdd:cd00818 175 -----------PEWV----------------------------------------------------------------- 178
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 384 rlaqalglpysevieaspdgterlsgsaeftgmtrQDAFVALTRKARgmrvgghvtsnklkDWLISRQRYWGTPIPIVHC 463
Cdd:cd00818 179 -----------------------------------KNRFGNWLENRR--------------DWCISRQRYWGTPIPVWYC 209
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 464 PACGPVPVplqdlpvilpsiasltgrggsplatalewvncscprckgsaKRETDTMDTFVDS--AWYYFRytdpHNtqsP 541
Cdd:cd00818 210 EDCGEVLV-----------------------------------------RRVPDVLDVWFDSgsMPYAQL----HY---P 241
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 542 FGSALADFWMPVDLYIGGkehavmhlfyarflshfcHDQkmvkHREPFHKLLAQGLIkgqTF-RLPSGQCLKKEDI-DFT 619
Cdd:cd00818 242 FENEDFEELFPADFILEG------------------SDQ----TRGWFYSLLLLSTA---LFgKAPYKNVIVHGFVlDED 296
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*.
gi 23346617 620 GpapvcaktkeklevtwEKMSKSKHNGVDPEEIVAQYGIDTIRLYILFAAPPEKDI 675
Cdd:cd00818 297 G----------------RKMSKSLGNYVDPQEVVDKYGADALRLWVASSDVYAEDL 336
|
|
| tRNA-synt_1g |
pfam09334 |
tRNA synthetases class I (M); This family includes methionyl tRNA synthetases. |
83-219 |
1.77e-18 |
|
tRNA synthetases class I (M); This family includes methionyl tRNA synthetases.
Pssm-ID: 401322 [Multi-domain] Cd Length: 387 Bit Score: 88.50 E-value: 1.77e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 83 FYLLSMFPYPSGKLHMGHVRVYTLSDTIARFQKMRGMQVINPMGWDAFGLPAENAAIERNLHPESWTQSNIKHMRKQLDR 162
Cdd:pfam09334 1 ILVTTALPYANGPPHLGHLYSYIPADIFARYLRLRGYDVLFVCGTDEHGTPIELKAEKEGITPEELVDRYHEIHREDFKK 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 23346617 163 LGLcfSWDREITTCLPDYYKWTQYLFIKLYEAGLAYQKEALVNWDPVDQTVLANEQV 219
Cdd:pfam09334 81 FNI--SFDDYGRTTSERHHELVQEFFLKLYENGYIYEKEIEQFYCPSDERFLPDRYV 135
|
|
| leuS |
PRK12300 |
leucyl-tRNA synthetase; Reviewed |
96-213 |
2.66e-17 |
|
leucyl-tRNA synthetase; Reviewed
Pssm-ID: 237049 [Multi-domain] Cd Length: 897 Bit Score: 86.85 E-value: 2.66e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 96 LHMGHVRVYTLSDTIARFQKMRGMQVINPMGWDAFGLP----AENAA------IE--RNLH------------PESWTQS 151
Cdd:PRK12300 1 LHVGHGRTYTIGDVIARYKRMRGYNVLFPMAFHVTGTPilgiAERIArgdpetIElyKSLYgipeeelekfkdPEYIVEY 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 23346617 152 NIKHMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLAYQKEALVNWDPVDQTV 213
Cdd:PRK12300 81 FSEEAKEDMKRIGYSIDWRREFTTTDPEYSKFIEWQFRKLKEKGLIVKGSHPVRYCPNDNNP 142
|
|
| PRK11893 |
PRK11893 |
methionyl-tRNA synthetase; Reviewed |
82-261 |
4.67e-17 |
|
methionyl-tRNA synthetase; Reviewed
Pssm-ID: 237012 [Multi-domain] Cd Length: 511 Bit Score: 85.32 E-value: 4.67e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 82 KFYLLSMFPYPSGKLHMGHVRVYTLSDTIARFQKMRGMQVINPMGWDAFGLPAENAAIERNLHPESWTQSNIKHMRKQLD 161
Cdd:PRK11893 2 KFYITTPIYYPNGKPHIGHAYTTLAADVLARFKRLRGYDVFFLTGTDEHGQKIQRKAEEAGISPQELADRNSAAFKRLWE 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 162 RLGlcFSWDREITTCLPDYYKWTQYLFIKLYEAGLAYQKEAL--------VNWDPvdqtvlaNEQVNEYGCSWRSGAKVE 233
Cdd:PRK11893 82 ALN--ISYDDFIRTTDPRHKEAVQEIFQRLLANGDIYLGKYEgwycvrceEFYTE-------SELIEDGYRCPPTGAPVE 152
|
170 180
....*....|....*....|....*...
gi 23346617 234 KKYLRQWFIKTTAYAKAMQDALADLPEW 261
Cdd:PRK11893 153 WVEEESYFFRLSKYQDKLLELYEANPDF 180
|
|
| PTZ00419 |
PTZ00419 |
valyl-tRNA synthetase-like protein; Provisional |
56-831 |
7.79e-17 |
|
valyl-tRNA synthetase-like protein; Provisional
Pssm-ID: 240411 [Multi-domain] Cd Length: 995 Bit Score: 85.44 E-value: 7.79e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 56 KDVE----KWWHQ----QIKEQASRVSEEDKlkpkFYLLSMFPYPSGKLHMGHVRVYTLSDTIARFQKMRGMQVINPMGW 127
Cdd:PTZ00419 31 KEVEsgwyEWWEKsgffKPAEDAKSLNSGKK----FVIVLPPPNVTGYLHIGHALTGAIQDSLIRYHRMKGDETLWVPGT 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 128 DAFGLpAENAAIERNLHPES------------------WTQ---SNIKhmrKQLDRLGLCFSWDREITTCLPDYYKWTQY 186
Cdd:PTZ00419 107 DHAGI-ATQVVVEKKLMKEEnktrhdlgreeflkkvweWKDkhgNNIC---NQLRRLGSSLDWSREVFTMDEQRSKAVKE 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 187 LFIKLYEAGLAYQKEALVNWDPVDQTVLANEQVNEygcswrsgAKVEKKYlrqwFIKTTAYAKAMQdaladlpewygikg 266
Cdd:PTZ00419 183 AFVRLYEDGLIYRDTRLVNWCCYLKTAISDIEVEF--------EEIEKPT----KITIPGYDKKVE-------------- 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 267 MQAHWigdcvgcHLDFTLKVDGEdtgEKLTAYTATPEAIYGISHVAISP-----SHglLHGCSsvkkaLQKALVPGRDcl 341
Cdd:PTZ00419 237 VGVLW-------HFAYPLEDSGQ---EEIVVATTRIETMLGDVAVAVHPkderyKK--LHGKE-----LIHPFIPDRK-- 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 342 tpvmavsmltlqevpIVIMANPDLegsLDSKIG------IPSTSSEDTRLAQALGLPYSEVIEAspDGTERLSGsAEFTG 415
Cdd:PTZ00419 298 ---------------IPIIADDEL---VDMEFGtgavkiTPAHDPNDYEIAKRHNLPFINIFTL--DGKINENG-GEFAG 356
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 416 MTRQDAFVALTRK-----------ARGMRVG-----------------------------GHVTSNKLK----------- 444
Cdd:PTZ00419 357 MHRFDCRRKIEEElkemgllrdkvPNPMRLPrcsrsgdivepmlipqwyvnckdmakravEAVRNGELKiipsshenvwy 436
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 445 -------DWLISRQRYWGTPIPIVHCPACGPVPVPL-QDLPVILPSIAsltgrggSPLATALEWVNCSCPRCkgSAKRET 516
Cdd:PTZ00419 437 hwleniqDWCISRQLWWGHRIPAYRVISKGPETDPSdEEPWVVARSEE-------EALEKAKKKFGLSEEDF--ELEQDE 507
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 517 DTMDTFVDSAWYYFrytdphntqSPFG--SALADF--WMPVDLYIGGkeHAVMHLFYARFLSHFCHDQKMVkhrePFHKL 592
Cdd:PTZ00419 508 DVLDTWFSSGLFPF---------STLGwpDQTDDLqrFFPTSLLETG--SDILFFWVARMVMMSLHLTDKL----PFKTV 572
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 593 LAQGLIKgqtfrlpsgqclkkediDFTGpapvcaktkeklevtwEKMSKSKHNGVDPEEIVAqyGI------DTIRLYIL 666
Cdd:PTZ00419 573 FLHAMVR-----------------DSQG----------------EKMSKSKGNVIDPLEVIE--GIslqdlnQKLYEGNL 617
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 667 faapPEKDILWDVK--------------TDALP-GVLRWQQ--------------------RLWSlTTRFIEARTSGTVP 711
Cdd:PTZ00419 618 ----PEKEIKRAIElqkkefpngipecgTDALRfGLLAYTQqgrninldinrvvgyrhfcnKLWN-AVKFALMKLLKDFN 692
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 712 QPQLLNSKEKTKAQNLWEYK------NAVIAQVTTHFTE-DFAL--NSVVS----QL-------------MGLSSALSQA 765
Cdd:PTZ00419 693 LPNSTLFKPNNVESLPWEDKwilhrlNVAIKEVTEGFKEyDFSEatQATYNfwlyELcdvylelikprlsKQSDGERKQH 772
|
890 900 910 920 930 940
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 23346617 766 SQRVVLHSPEFEdalcalLVMAAPLAPHVTSELWAGLTLVPSKLcdhyawdSGVMLQAWPTVDSQF 831
Cdd:PTZ00419 773 AQDVLHTVLDIG------LRLLHPMMPFITEELYQRLPNYLRKS-------ESISIAKYPQPNPGW 825
|
|
| PLN02943 |
PLN02943 |
aminoacyl-tRNA ligase |
48-460 |
6.66e-14 |
|
aminoacyl-tRNA ligase
Pssm-ID: 215509 [Multi-domain] Cd Length: 958 Bit Score: 76.13 E-value: 6.66e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 48 KEYTLQTRKDVEKWWHQQ--IKEQASRVSEEdklkpkfYLLSMfPYP--SGKLHMGHVRVYTLSDTIARFQKMRGMQVIN 123
Cdd:PLN02943 59 KSFDFTSEERIYNWWESQgyFKPNFDRGGDP-------FVIPM-PPPnvTGSLHMGHAMFVTLEDIMVRYNRMKGRPTLW 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 124 PMGWDAFGLpAENAAIERNLHPE-----------------SWTQSNIKHMRKQLDRLGLCFSWDREITTcLPDYYKWTQY 186
Cdd:PLN02943 131 IPGTDHAGI-ATQLVVEKMLASEgikrtdlgrdeftkrvwEWKEKYGGTITNQIKRLGASCDWSRERFT-LDEQLSRAVV 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 187 -LFIKLYEAGLAYQKEALVNWDPVDQTVLANEQVnEYgcSWRSGakvekkylRQWFIKttayakamqdaladlpewYGIK 265
Cdd:PLN02943 209 eAFVRLHEKGLIYQGSYMVNWSPNLQTAVSDLEV-EY--SEEPG--------TLYYIK------------------YRVA 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 266 GmqahwigdcvgchldftlkvdgeDTGEKLTAYTATPEAIYGISHVAISPSHGLLHgcssvKKALQKALVPgrdcltpvm 345
Cdd:PLN02943 260 G-----------------------GSEDFLTIATTRPETLFGDVAIAVNPEDDRYS-----KYIGKMAIVP--------- 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 346 avsMLTLQEVPIVIMANPDLE-GSLDSKIgIPSTSSEDTRLAQALGLPYSEVIeaSPDGT-------------ERLSGSA 411
Cdd:PLN02943 303 ---MTYGRHVPIIADRYVDKDfGTGVLKI-SPGHDHNDYLLARKLGLPILNVM--NKDGTlnevaglywfearEKLWSDL 376
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 412 EFTGMT------------------------RQDAFVA---LTRKA--------------RGMRVGGHVTSNkLKDWLISR 450
Cdd:PLN02943 377 EETGLAvkkephtlrvprsqrggevieplvSKQWFVTmepLAEKAlkavengeltiipeRFEKIYNHWLSN-IKDWCISR 455
|
490
....*....|
gi 23346617 451 QRYWGTPIPI 460
Cdd:PLN02943 456 QLWWGHRIPV 465
|
|
| PLN02843 |
PLN02843 |
isoleucyl-tRNA synthetase |
47-222 |
1.22e-12 |
|
isoleucyl-tRNA synthetase
Pssm-ID: 215452 [Multi-domain] Cd Length: 974 Bit Score: 72.11 E-value: 1.22e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 47 TKEYTLQtrkdveKWWHQ-QIKEqasRVSEEDKLKPkFYLLSMFPYPSGKLHMGHVRVYTLSDTIARFQKMRGMQVINPM 125
Cdd:PLN02843 7 TREPEIQ------KLWEEnQVYK---RVSDRNNGES-FTLHDGPPYANGDLHIGHALNKILKDFINRYQLLQGKKVHYVP 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 126 GWDAFGLPAE-------NAAIERNLHP-------ESWTQSNIKHMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKL 191
Cdd:PLN02843 77 GWDCHGLPIElkvlqslDQEARKELTPiklrakaAKFAKKTVDTQRESFKRYGVWGDWENPYLTLDPEYEAAQIEVFGQM 156
|
170 180 190
....*....|....*....|....*....|.
gi 23346617 192 YEAGLAYQKEALVNWDPVDQTVLANEQVnEY 222
Cdd:PLN02843 157 FLNGYIYRGRKPVHWSPSSRTALAEAEL-EY 186
|
|
| PLN02381 |
PLN02381 |
valyl-tRNA synthetase |
58-459 |
3.08e-12 |
|
valyl-tRNA synthetase
Pssm-ID: 215214 [Multi-domain] Cd Length: 1066 Bit Score: 70.70 E-value: 3.08e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 58 VEKWWHQQIKEQASRVSEEDKLKPKFYLLSMFPYPSGKLHMGHVRVYTLSDTIARFQKMRGMQVINPMGWDAFGLpAENA 137
Cdd:PLN02381 105 VEKSWYAWWEKSGYFGADAKSSKPPFVIVLPPPNVTGALHIGHALTAAIEDTIIRWKRMSGYNALWVPGVDHAGI-ATQV 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 138 AIERNLHPE------------------SWTQSNIKHMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLAYQ 199
Cdd:PLN02381 184 VVEKKLMRErhltrhdigreefvsevwKWKDEYGGTILNQLRRLGASLDWSRECFTMDEQRSKAVTEAFVRLYKEGLIYR 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 200 KEALVNWDPVDQTVLANEQVNeygcswrsgaKVEKKylRQWFIKTTAYAKAMQdaladlpewygikgmqahwigdcVGCH 279
Cdd:PLN02381 264 DIRLVNWDCTLRTAISDVEVD----------YIDIK--ERTLLKVPGYDKPVE-----------------------FGVL 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 280 LDFTLKVDGeDTGEKLTAYTATpEAIYGISHVAISP-----SHglLHGcssvkkalqkalvpgrdcltpVMAVSMLTLQE 354
Cdd:PLN02381 309 TSFAYPLEG-GLGEIVVATTRI-ETMLGDTAIAIHPdderyKH--LHG---------------------KFAVHPFNGRK 363
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 355 VPIV---IMANPDLeGSLDSKIgIPSTSSEDTRLAQALGLPYSEVIeaSPDGTERLSGSAEFTGMTRQDAFVALTR--KA 429
Cdd:PLN02381 364 LPIIcdaILVDPNF-GTGAVKI-TPAHDPNDFEVGKRHNLEFINIF--TDDGKINSNGGSEFAGMPRFAAREAVIEalQK 439
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 430 RG---------MRVGGHVTSN--------------------------------------------------KLKDWLISR 450
Cdd:PLN02381 440 KGlyrgaknneMRLGLCSRTNdvvepmikpqwfvncssmakqaldaaidgenkklefipkqylaewkrwleNIRDWCISR 519
|
....*....
gi 23346617 451 QRYWGTPIP 459
Cdd:PLN02381 520 QLWWGHRIP 528
|
|
| metG |
PRK00133 |
methionyl-tRNA synthetase; Reviewed |
90-215 |
1.30e-10 |
|
methionyl-tRNA synthetase; Reviewed
Pssm-ID: 234655 [Multi-domain] Cd Length: 673 Bit Score: 65.17 E-value: 1.30e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 90 PYPSGKLHMGHVRVYTLSDTIARFQKMRGMQVINPMGWDAFGLPAENAAIERNLHPESWTqSNIKHMRKQ-LDRLGLCF- 167
Cdd:PRK00133 11 PYANGPIHLGHLVEYIQADIWVRYQRMRGHEVLFVCADDAHGTPIMLKAEKEGITPEELI-ARYHAEHKRdFAGFGISFd 89
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 23346617 168 SWDReitTCLPDYYKWTQYLFIKLYEAGLAYQKEALVNWDPVDQTVLA 215
Cdd:PRK00133 90 NYGS---THSEENRELAQEIYLKLKENGYIYEKTIEQLYDPEKGMFLP 134
|
|
| PRK12267 |
PRK12267 |
methionyl-tRNA synthetase; Reviewed |
80-195 |
4.97e-10 |
|
methionyl-tRNA synthetase; Reviewed
Pssm-ID: 237028 [Multi-domain] Cd Length: 648 Bit Score: 63.28 E-value: 4.97e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 80 KPKFYLLSMFPYPSGKLHMGHVrvYT--LSDTIARFQKMRGMQVINPMGWDAFGLPAENAAIERNLHPESWTQSNIKHMR 157
Cdd:PRK12267 3 KKTFYITTPIYYPNGKPHIGHA--YTtiAADALARYKRLQGYDVFFLTGTDEHGQKIQQAAEKAGKTPQEYVDEISAGFK 80
|
90 100 110
....*....|....*....|....*....|....*...
gi 23346617 158 KQLDRLGLcfSWDREITTCLPDYYKWTQYLFIKLYEAG 195
Cdd:PRK12267 81 ELWKKLDI--SYDKFIRTTDERHKKVVQKIFEKLYEQG 116
|
|
| tRNA-synt_1_2 |
pfam13603 |
Leucyl-tRNA synthetase, Domain 2; This is a family of the conserved region of Leucine-tRNA ... |
270-429 |
7.70e-10 |
|
Leucyl-tRNA synthetase, Domain 2; This is a family of the conserved region of Leucine-tRNA ligase or Leucyl-tRNA synthetase, EC:6.1.1.4.
Pssm-ID: 433342 [Multi-domain] Cd Length: 185 Bit Score: 59.10 E-value: 7.70e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 270 HWIGDCVGCHLDFTLkvdgEDTGEKLTAYTATPEAIYGISHVAISPSHGLLHGCSSVKKALQK---------------AL 334
Cdd:pfam13603 2 NWIGRSEGAEITFPV----EGTDEKIEVFTTRPDTLMGVTFVALAPEHPLVEKLAEKNPEVAAfieeckntseiertsET 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 335 VPGRDCLTPVMAVSMLTLQEVPIVImANPDLE--GSlDSKIGIPSTSSEDTRLAQALGLPYSEVIEaSPDGTE------- 405
Cdd:pfam13603 78 KEKEGVFTGLYAIHPITGEKIPIWI-ANFVLMeyGT-GAVMAVPAHDQRDFEFAKKYNLPIKPVIQ-PEDGDLdldimte 154
|
170 180 190
....*....|....*....|....*....|
gi 23346617 406 ------RLSGSAEFTGMTRQDAFVALTRKA 429
Cdd:pfam13603 155 ayteegILVNSGEFDGLDSEEAKEAIIKKL 184
|
|
| PLN02882 |
PLN02882 |
aminoacyl-tRNA ligase |
67-199 |
2.58e-08 |
|
aminoacyl-tRNA ligase
Pssm-ID: 215477 [Multi-domain] Cd Length: 1159 Bit Score: 57.81 E-value: 2.58e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 67 KEQASRvseeDKLKPKFYLLSMFPYPSGKLHMGHVRVYTLSDTIARFQKMRGMQVINPMGWDAFGLPAENaAIERNLhpe 146
Cdd:PLN02882 28 KTQLKR----TEGLPEYIFYDGPPFATGLPHYGHILAGTIKDIVTRYQSMTGHHVTRRFGWDCHGLPVEY-EIDKKL--- 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 147 swtqsNIKHmRKQLDRLGL------CFS--------WDREITTC-----LPDYYK----------WtqYLFIKLYEAGLA 197
Cdd:PLN02882 100 -----GIKR-RDDVLKMGIdkyneeCRSivtryskeWEKTVTRTgrwidFENDYKtmdpkfmesvW--WVFKQLFEKGLV 171
|
..
gi 23346617 198 YQ 199
Cdd:PLN02882 172 YK 173
|
|
| MetRS_core |
cd00814 |
catalytic core domain of methioninyl-tRNA synthetases; Methionine tRNA synthetase (MetRS) ... |
637-674 |
3.91e-08 |
|
catalytic core domain of methioninyl-tRNA synthetases; Methionine tRNA synthetase (MetRS) catalytic core domain. This class I enzyme aminoacylates the 2'-OH of the nucleotide at the 3' of the appropriate tRNA. MetRS, which consists of the core domain and an anti-codon binding domain, functions as a monomer. However, in some species the anti-codon binding domain is followed by an EMAP domain. In this case, MetRS functions as a homodimer. The core domain is based on the Rossman fold and is responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate. It contains the characteristic class I HIGH and KMSKS motifs, which are involved in ATP binding. As a result of a deletion event, MetRS has a significantly shorter core domain insertion than IleRS, ValRS, and LeuR. Consequently, the MetRS insertion lacks the editing function.
Pssm-ID: 173907 [Multi-domain] Cd Length: 319 Bit Score: 56.00 E-value: 3.91e-08
10 20 30
....*....|....*....|....*....|....*...
gi 23346617 637 EKMSKSKHNGVDPEEIVAQYGIDTIRLYILFAAPPEKD 674
Cdd:cd00814 279 KKMSKSRGNVVDPDDLLERYGADALRYYLLRERPEGKD 316
|
|
| Anticodon_1 |
pfam08264 |
Anticodon-binding domain of tRNA; This domain is found mainly hydrophobic tRNA synthetases. ... |
732-848 |
4.92e-08 |
|
Anticodon-binding domain of tRNA; This domain is found mainly hydrophobic tRNA synthetases. The domain binds to the anticodon of the tRNA.
Pssm-ID: 400523 [Multi-domain] Cd Length: 141 Bit Score: 52.79 E-value: 4.92e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 732 NAVIAQVTTHFtEDFALNSVVSQLM-GLSSALS----QASQRVVLHSPEFEDA-------LCALLVMAAPLAPHVTSELW 799
Cdd:pfam08264 9 NKLIKEVTEAY-ENYRFNTAAQALYeFFWNDLSdwylELIKDRLYGEEPDSRAqttlyevLETLLRLLAPFMPFITEELW 87
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 23346617 800 AGLTlvpsklcdhyawdsgVMLQAWPTV----DSQFLQKPDMVQMAVLINNKA 848
Cdd:pfam08264 88 QKES---------------IHLAPWPEDaeleEAELEEAFELRQEIVQAIRKL 125
|
|
| PRK12267 |
PRK12267 |
methionyl-tRNA synthetase; Reviewed |
637-670 |
1.18e-06 |
|
methionyl-tRNA synthetase; Reviewed
Pssm-ID: 237028 [Multi-domain] Cd Length: 648 Bit Score: 52.11 E-value: 1.18e-06
10 20 30
....*....|....*....|....*....|....
gi 23346617 637 EKMSKSKHNGVDPEEIVAQYGIDTIRLYILFAAP 670
Cdd:PRK12267 298 GKMSKSKGNVVDPEELVDRYGLDALRYYLLREVP 331
|
|
| PLN02959 |
PLN02959 |
aminoacyl-tRNA ligase |
52-138 |
2.72e-06 |
|
aminoacyl-tRNA ligase
Pssm-ID: 215518 [Multi-domain] Cd Length: 1084 Bit Score: 51.22 E-value: 2.72e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 52 LQTRKDVEKWWHQQIKEQASRVSEEDKLKPKFYllSMFPYP--SGKLHMGHvrVYTLSDTI--ARFQKMRGMQVINPMGW 127
Cdd:PLN02959 16 LEIEVAVQKWWEEEKVFEAEAGDEPPKPGEKFF--GNFPYPymNGLLHLGH--AFSLSKLEfaAAYHRLRGANVLLPFAF 91
|
90
....*....|.
gi 23346617 128 DAFGLPAENAA 138
Cdd:PLN02959 92 HCTGMPIKASA 102
|
|
| PTZ00427 |
PTZ00427 |
isoleucine-tRNA ligase, putative; Provisional |
444-666 |
4.36e-06 |
|
isoleucine-tRNA ligase, putative; Provisional
Pssm-ID: 173617 [Multi-domain] Cd Length: 1205 Bit Score: 50.74 E-value: 4.36e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 444 KDWLISRQRYWGTPIPIVHCPACGPVpvplqdlpVILPSIASLTGRGGSPLATAL-----EWVNCSCPRCKG--SAKRET 516
Cdd:PTZ00427 569 KDWCISRNRYWGTPIPIWADEKMETV--------ICVESIKHLEELSGVKNINDLhrhfiDHIEIKNPKGKTypKLKRIP 640
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 517 DTMDTFVDSAwyYFRYTDPHntqSPFGSALADFW--MPVDLYIGGKEHAVMHLFYARFLSHFCHDqkmvkhREPFHKLLA 594
Cdd:PTZ00427 641 EVFDCWFESG--SMPYAKVH---YPFSTEKEDFHkiFPADFIAEGLDQTRGWFYTLLVISTLLFD------KAPFKNLIC 709
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 23346617 595 QGLIkgqtfrlpsgqclkkedidftgpapvcaktkekLEVTWEKMSKSKHNGVDPEEIVAQYGIDTIRLYIL 666
Cdd:PTZ00427 710 NGLV---------------------------------LASDGKKMSKRLKNYPDPLYILDKYGADSLRLYLI 748
|
|
| PLN02224 |
PLN02224 |
methionine-tRNA ligase |
69-272 |
6.19e-04 |
|
methionine-tRNA ligase
Pssm-ID: 177869 [Multi-domain] Cd Length: 616 Bit Score: 43.55 E-value: 6.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 69 QASRVSEEDKlkpkFYLLSMFPYPSGKLHMGHVRVYTLSDTIARFQKMRGMQVINPMGWDAFG--LPAENAAIERN--LH 144
Cdd:PLN02224 61 QESTVDEADT----FVLTTPLYYVNAPPHMGSAYTTIAADSIARFQRLLGKKVIFITGTDEHGekIATSAAANGRNppEH 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 145 PESWTQSnIKHMRKQLDrlglcFSWDREITTCLPDYYKWTQYLFIKLYEAGLAYQK--EAL--VNWDPV--DQTVLANE- 217
Cdd:PLN02224 137 CDIISQS-YRTLWKDLD-----IAYDKFIRTTDPKHEAIVKEFYARVFANGDIYRAdyEGLycVNCEEYkdEKELLENNc 210
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 23346617 218 -QVNEYGCSwrsgAKVEKKYlrqwFIKTTAYAKAMQDALADLPEW----YGIKGMQAhWI 272
Cdd:PLN02224 211 cPVHQMPCV----ARKEDNY----FFALSKYQKPLEDILAQNPRFvqpsYRLNEVQS-WI 261
|
|
|