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Conserved domains on  [gi|25057284|ref|NP_739848|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Cetostoma regani]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009581)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 6.31e-72

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 209.78  E-value: 6.31e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25057284    1 MNLVLTIMILTIALSTILAIVSFWLPQISSDYEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPLPWGV 80
Cdd:MTH00136   1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 25057284   81 QLISPLLTFTWATAVLVLLTLGLIYEWAQGGLEWAE 116
Cdd:MTH00136  81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 6.31e-72

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 209.78  E-value: 6.31e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25057284    1 MNLVLTIMILTIALSTILAIVSFWLPQISSDYEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPLPWGV 80
Cdd:MTH00136   1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 25057284   81 QLISPLLTFTWATAVLVLLTLGLIYEWAQGGLEWAE 116
Cdd:MTH00136  81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
20-113 3.38e-29

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 100.96  E-value: 3.38e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25057284    20 IVSFWLPQISSDYEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLlpLPWGVQL-ISPLLTFTWATAVLVL 98
Cdd:pfam00507   2 LLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFrELGWFGFVEMLIFIAI 79

                          90
                  ....*....|....*
gi 25057284    99 LTLGLIYEWAQGGLE 113
Cdd:pfam00507  80 LLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 4-114 1.17e-24

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 90.18  E-value: 1.17e-24
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25057284   4 VLTIMILTIALSTILAIVSFWLPQISSDYEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLlpLPWGVQLI 83
Cdd:COG0838   8 ILIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFR 85

                        90       100       110
                ....*....|....*....|....*....|..
gi 25057284  84 S-PLLTFTWATAVLVLLTLGLIYEWAQGGLEW 114
Cdd:COG0838  86 ElGWFGLIEMLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 6.31e-72

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 209.78  E-value: 6.31e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25057284    1 MNLVLTIMILTIALSTILAIVSFWLPQISSDYEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPLPWGV 80
Cdd:MTH00136   1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 25057284   81 QLISPLLTFTWATAVLVLLTLGLIYEWAQGGLEWAE 116
Cdd:MTH00136  81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 3-116 3.86e-58

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 174.80  E-value: 3.86e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25057284    3 LVLTIMILTIALSTILAIVSFWLPQISSDYEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPLPWGVQL 82
Cdd:MTH00069   1 LIMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQL 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 25057284   83 ISPLLTFTWATAVLVLLTLGLIYEWAQGGLEWAE 116
Cdd:MTH00069  81 NTPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 2-115 3.21e-53

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 162.36  E-value: 3.21e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25057284    2 NLVLTIMILTIALSTILAIVSFWLPQISSDYEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPLPWGVQ 81
Cdd:MTH00113   1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 25057284   82 LISPLLTFTWATAVLVLLTLGLIYEWAQGGLEWA 115
Cdd:MTH00113  81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-116 1.04e-47

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 148.55  E-value: 1.04e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25057284    1 MNLVLTIMIlTIALSTILAIVSFWLPQISSDYEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPLPWGV 80
Cdd:MTH00106   1 MNLMLTLLT-NTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAS 79

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 25057284   81 QLISPLLTFTWATAVLVLLTLGLIYEWAQGGLEWAE 116
Cdd:MTH00106  80 QTNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-116 1.27e-40

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 130.49  E-value: 1.27e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25057284    1 MNLVLTIMILTIALSTILAIVSFWLPQISSDYEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPLPWGV 80
Cdd:MTH00042   1 MTNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPAT 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 25057284   81 QLISPLLTFTWATAVLVLLTLGLIYEWAQGGLEWAE 116
Cdd:MTH00042  81 LITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-114 1.04e-37

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 123.08  E-value: 1.04e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25057284    1 MNLVLTIMILTIALSTILAIVSFWLPQISSDYEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPLPWGV 80
Cdd:MTH00203   1 MNLIMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSN 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 25057284   81 QLISPllTFTWATAVLVLLTLGLIYEWAQGGLEW 114
Cdd:MTH00203  81 QLSSL--SLLLAFLFLILLTLGLIYEWLQGGLEW 112
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-116 3.60e-31

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 106.48  E-value: 3.60e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25057284    1 MNLVLTIMILTIALSTILAIVSFWLPQIS-SDYEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPLPWG 79
Cdd:MTH00148   1 MLSILLSLLFALILSPVLLLLGLVLSKRSySDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 25057284   80 VQLISPLLTFTWATAVLVLLTLGLIYEWAQGGLEWAE 116
Cdd:MTH00148  81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-114 4.37e-30

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 103.70  E-value: 4.37e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25057284    3 LVLTIMILTIALSTILAIVSFWL-PQISSDYEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPLPWGVQ 81
Cdd:MTH00161   1 MILIILLIILLISIILMILASLLsKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 25057284   82 LISPLLTFTWATAVLVLLTLGLIYEWAQGGLEW 114
Cdd:MTH00161  81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
20-113 3.38e-29

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 100.96  E-value: 3.38e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25057284    20 IVSFWLPQISSDYEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLlpLPWGVQL-ISPLLTFTWATAVLVL 98
Cdd:pfam00507   2 LLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFrELGWFGFVEMLIFIAI 79

                          90
                  ....*....|....*
gi 25057284    99 LTLGLIYEWAQGGLE 113
Cdd:pfam00507  80 LLVGLVYAWKKGALE 94
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-116 6.17e-27

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 95.83  E-value: 6.17e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25057284    1 MNLVLTIMILTIALSTILAIVSFWLPQIS-SDYEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPLPWG 79
Cdd:MTH00202   1 MLLILFMSILSILISSLLFLVSWMLSFRSlMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 25057284   80 VQLISPLLTFTWATAVLVLLTLGLIYEWAQGGLEWAE 116
Cdd:MTH00202  81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWVK 117
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 4-114 6.96e-27

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 95.93  E-value: 6.96e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25057284    4 VLTIMILTIALSTILAIVSFWLPQISSDYEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLlpLPWGVQLI 83
Cdd:MTH00055   8 IFILLLFSIGLSTVISGASYIVGVKQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFL--FPWCVVYN 85

                         90       100       110
                 ....*....|....*....|....*....|..
gi 25057284   84 SPLLTFTWATAV-LVLLTLGLIYEWAQGGLEW 114
Cdd:MTH00055  86 QIGLFGFWVMYLfLIILTIGLIYEWVKGGLEW 117
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 4-114 4.17e-25

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 91.28  E-value: 4.17e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25057284    4 VLTIMILTIALSTILAIVSFWLPQISSDYEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPLPWGVQLI 83
Cdd:MTH00018   3 LFILLIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQI 82

                         90       100       110
                 ....*....|....*....|....*....|.
gi 25057284   84 SPLLTFTWAtAVLVLLTLGLIYEWAQGGLEW 114
Cdd:MTH00018  83 APFGFWTMV-GFLFILTLGLIYEWIKGGLEW 112
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 4-114 1.17e-24

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 90.18  E-value: 1.17e-24
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25057284   4 VLTIMILTIALSTILAIVSFWLPQISSDYEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLlpLPWGVQLI 83
Cdd:COG0838   8 ILIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFR 85

                        90       100       110
                ....*....|....*....|....*....|..
gi 25057284  84 S-PLLTFTWATAVLVLLTLGLIYEWAQGGLEW 114
Cdd:COG0838  86 ElGWFGLIEMLVFIAILLVGLIYAWKKGALEW 117
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 4-115 3.91e-24

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 88.77  E-value: 3.91e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25057284    4 VLTIMILTIALSTILAIVSFWLPQISSDYEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLlpLPWGVQLI 83
Cdd:PRK06602  11 FLIFLIVAIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAVSFR 88

                         90       100       110
                 ....*....|....*....|....*....|...
gi 25057284   84 -SPLLTFTWATAVLVLLTLGLIYEWAQGGLEWA 115
Cdd:PRK06602  89 eIGWLGFVEAMIFILVLLVGLVYLWRKGALDWE 121
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-115 7.03e-24

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 88.38  E-value: 7.03e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25057284    1 MNLVLTIMILTIALSTILAIVSFWLPQISS-DYEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPLPWG 79
Cdd:MTH00012   1 MSLMMIPMMISLILPPLVLGAAWVLAARSTaDREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 25057284   80 VQLISPLLTFTWATAVLVLLTLGLIYEWAQGGLEWA 115
Cdd:MTH00012  81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 4-114 2.12e-17

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 71.89  E-value: 2.12e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25057284    4 VLTIMILTIALSTILAIVSFWLPQISSDYEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPLPWGVQLI 83
Cdd:MTH00030  13 LLGVGIILLLVSISFTLGNSRIGLTKPDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFNQL 92

                         90       100       110
                 ....*....|....*....|....*....|.
gi 25057284   84 SpLLTFTWATAVLVLLTLGLIYEWAQGGLEW 114
Cdd:MTH00030  93 N-LFSFWIVYTFLIVLAIGLAYEWIKGGLEW 122
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 1-114 1.55e-11

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 56.60  E-value: 1.55e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25057284    1 MNLVLTIMILtIALSTILAIVSFWLPQISS----DYEKLSPYECGFDPLGTARLP--FSLRFFLVAILFLLFDLEIALLL 74
Cdd:PRK07928   1 MNVYIPILVL-GALAAAFAVVSVVVASLVGpkryNRAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLY 79

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 25057284   75 PlpWGVQLISpLLTFTWATAVLVLLTLGL--IYEWAQGGLEW 114
Cdd:PRK07928  80 P--WAVSFDA-LGVFGLVEMALFMLTVFVayAYVWRRGGLEW 118
ndhC CHL00022
NADH dehydrogenase subunit 3
 3-114 1.93e-11

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 56.53  E-value: 1.93e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25057284    3 LVLTIMILTIALStilaiVSFWLPQISSDYEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLlpLPWGVQL 82
Cdd:CHL00022  14 LIISSLIPILAFL-----ISGLLAPISKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSF 86

                         90       100       110
                 ....*....|....*....|....*....|...
gi 25057284   83 -ISPLLTFTWATAVLVLLTLGLIYEWAQGGLEW 114
Cdd:CHL00022  87 dVLGVSAFIEALIFVLILIVGLVYAWRKGALEW 119
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
3-114 3.04e-09

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 50.82  E-value: 3.04e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25057284    3 LVLTIMILTiaLSTILA-IVSFWLPQISSDYEKLSPYECGFDPLGTARlPFSLRFFLVAILFLLFDLEIALLLPLPWGVQ 81
Cdd:PRK08489  17 LVLTFVAFF--LTTRLArFISRKLAQKNTEKLKLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFMFPWAVDFK 93

                         90       100       110
                 ....*....|....*....|....*....|...
gi 25057284   82 LISpLLTFTWATAVLVLLTLGLIYEWAQGGLEW 114
Cdd:PRK08489  94 LLG-LFGLIEMLLFIVLLTIGFIYAWKKGALEW 125
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
3-114 4.41e-08

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 47.82  E-value: 4.41e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25057284    3 LVLTIMILTIALSTILAIVSFWLPQISSDYEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPlpWGVQL 82
Cdd:PRK07756  11 IVLIFLLLGILLPVVALTLGRMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP--WAVAY 88

                         90       100       110
                 ....*....|....*....|....*....|...
gi 25057284   83 IS-PLLTFTWATAVLVLLTLGLIYEWAQGGLEW 114
Cdd:PRK07756  89 DKlGLFALIEMLIFVVMLLVGLAYAWKKKVLQW 121
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-114 2.70e-07

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 45.27  E-value: 2.70e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25057284    1 MNLVLTIMILTIALSTILAIVSFWLPQISSDYEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPLpwgv 80
Cdd:MTH00092   1 MLVLIFVFLFTLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGL---- 76

                         90       100       110
                 ....*....|....*....|....*....|....
gi 25057284   81 qLISPLLTFTWATAVLVLLTLGLIYEWAQGGLEW 114
Cdd:MTH00092  77 -LVSDFSSLISFFMLMIFIFFGFYMEWWYGKLIW 109
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 29-114 2.10e-05

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 40.65  E-value: 2.10e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25057284   29 SSDYEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPLPWGVQLISpllTFTWATAVLVLLTLGLIYEWA 108
Cdd:MTH00060  32 SGGFSWVSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMPFQGLLFY---NFWYYYFFLLLLFLGFVVELF 108


                 ....*.
gi 25057284  109 QGGLEW 114
Cdd:MTH00060 109 SGYVRW 114
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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