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Conserved domains on  [gi|154090949|ref|NP_899091|]
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alpha-defensin 20 precursor [Mus musculus]

Protein Classification

Defensin_propep and Defensin_1 domain-containing protein( domain architecture ID 10467842)

Defensin_propep and Defensin_1 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Defensin_propep pfam00879
Defensin propeptide;
15-51 1.06e-14

Defensin propeptide;


:

Pssm-ID: 459976  Cd Length: 51  Bit Score: 62.24  E-value: 1.06e-14
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 154090949  15 FQVQADPIQNTDEETNTEEQPGEEDQAVSVSFGDPEG 51
Cdd:pfam00879 15 LQAQAEPLQARADEAPDQEQPGAEDQDVSISFAGDES 51
Defensin_1 pfam00323
Mammalian defensin;
64-89 6.48e-05

Mammalian defensin;


:

Pssm-ID: 425607  Cd Length: 29  Bit Score: 36.81  E-value: 6.48e-05
                         10        20
                 ....*....|....*....|....*....
gi 154090949  64 CYCRKGGCNRGEQVYGTC--SGRLL-FCC 89
Cdd:pfam00323  1 CYCRRGGCRFPERRSGTCtiNGRRYrLCC 29
 
Name Accession Description Interval E-value
Defensin_propep pfam00879
Defensin propeptide;
15-51 1.06e-14

Defensin propeptide;


Pssm-ID: 459976  Cd Length: 51  Bit Score: 62.24  E-value: 1.06e-14
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 154090949  15 FQVQADPIQNTDEETNTEEQPGEEDQAVSVSFGDPEG 51
Cdd:pfam00879 15 LQAQAEPLQARADEAPDQEQPGAEDQDVSISFAGDES 51
Defensin_1 pfam00323
Mammalian defensin;
64-89 6.48e-05

Mammalian defensin;


Pssm-ID: 425607  Cd Length: 29  Bit Score: 36.81  E-value: 6.48e-05
                         10        20
                 ....*....|....*....|....*....
gi 154090949  64 CYCRKGGCNRGEQVYGTC--SGRLL-FCC 89
Cdd:pfam00323  1 CYCRRGGCRFPERRSGTCtiNGRRYrLCC 29
 
Name Accession Description Interval E-value
Defensin_propep pfam00879
Defensin propeptide;
15-51 1.06e-14

Defensin propeptide;


Pssm-ID: 459976  Cd Length: 51  Bit Score: 62.24  E-value: 1.06e-14
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 154090949  15 FQVQADPIQNTDEETNTEEQPGEEDQAVSVSFGDPEG 51
Cdd:pfam00879 15 LQAQAEPLQARADEAPDQEQPGAEDQDVSISFAGDES 51
Defensin_1 pfam00323
Mammalian defensin;
64-89 6.48e-05

Mammalian defensin;


Pssm-ID: 425607  Cd Length: 29  Bit Score: 36.81  E-value: 6.48e-05
                         10        20
                 ....*....|....*....|....*....
gi 154090949  64 CYCRKGGCNRGEQVYGTC--SGRLL-FCC 89
Cdd:pfam00323  1 CYCRRGGCRFPERRSGTCtiNGRRYrLCC 29
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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