|
Name |
Accession |
Description |
Interval |
E-value |
| GcvT |
COG0404 |
Glycine cleavage system protein T (aminomethyltransferase) [Amino acid transport and ... |
472-863 |
3.44e-120 |
|
Glycine cleavage system protein T (aminomethyltransferase) [Amino acid transport and metabolism]; Glycine cleavage system protein T (aminomethyltransferase) is part of the Pathway/BioSystem: Glycine cleavage
Pssm-ID: 440173 [Multi-domain] Cd Length: 372 Bit Score: 368.64 E-value: 3.44e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 472 GRPTERTS--GLYEELKTKcsMGFHAGWEQPHWFYkpgddtgykpsfrrtnwfEPVRREYKQVMEKVGVIDLTPFGKFTV 549
Cdd:COG0404 1 FRPLRRTPlhDRHVALGAK--FVDFGGWEMPVQYP------------------GGVIAEHLAVREAVGLFDVSHMGKIEV 60
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 550 KGKDSIHLLDHLFANTIPK--VGFTNISHILTPRGRVYAELTVSQLSPGEFLLITGSGSELHDLRWIEEVAVRGkYNTDI 627
Cdd:COG0404 61 TGPDAAAFLDRLVTNDVSKlkPGRARYTLMLNEDGGIIDDLTVYRLGEDRFLLVVNAANAAKDLAWLEEHLPPD-FDVTI 139
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 628 ANVTDEIGVLGIAGPLARKVLQKLTPDDLgnTSFKFLQSRKLNIAGIPVTAIRISYTGELGWELYHKRQDTSALYRALMQ 707
Cdd:COG0404 140 TDVTDDWALLAVQGPKAREVLAKLTDADL--SALPFMSFREGTVAGVPVRVSRTGYTGEDGFEIYVPAEDAEALWDALLE 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 708 AGQEEGIDNFGTYAMNALRLEKGFRAWGAEMNCDTNPLEAGLQYFIKLNKPaDFIGKQALTKIKEKGLQRKLVYLTLnTD 787
Cdd:COG0404 218 AGEEFGVKPCGLGARDTLRLEAGYPLYGHELDETTTPLEAGLGWAVKLDKG-DFIGKEALLRQKEEGPRRKLVGLEL-DG 295
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1785338732 788 NVDPEGNESVWHNGKVVGNTTSGTYSYSTNQSLAFAYVPVELSTTGQKLEVELLGNKYPATVIQEPLVltEPTRSR 863
Cdd:COG0404 296 RGVPRAGAPVLADGEVVGEVTSGTFSPTLGKSIALAYVPAGLARPGTELEVEIRGKRVPAEVVKPPFY--DPEGER 369
|
|
| DadA |
COG0665 |
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; |
56-438 |
5.55e-92 |
|
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
Pssm-ID: 440429 [Multi-domain] Cd Length: 364 Bit Score: 294.51 E-value: 5.55e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 56 TAETVIIGGGCIGVSLAYHLAKAGMkDVVLLEKSELTAGSTWHAAGL--TTYFHPGIN-LKKIHYYSIKLYERLEEETGQ 132
Cdd:COG0665 2 TADVVVIGGGIAGLSTAYHLARRGL-DVTVLERGRPGSGASGRNAGQlrPGLAALADRaLVRLAREALDLWRELAAELGI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 133 AVGFHQPGSIRIASTPTRVDELKHQMTRAHWHPTPQYLVEPEKVQELFPLLNMNKVLAGLYNPGDGHIDPYSLTMALAAG 212
Cdd:COG0665 81 DCDFRRTGVLYLARTEAELAALRAEAEALRALGLPVELLDAAELREREPGLGSPDYAGGLYDPDDGHVDPAKLVRALARA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 213 ARKYGAQLYYPAEVTGLIPQPNGTWDVVTAHGTIHANRIVNAAGFWAREVGKLIGLPHPLIPVHHQYVVTATVPEvkalN 292
Cdd:COG0665 161 ARAAGVRIREGTPVTGLEREGGRVTGVRTERGTVRADAVVLAAGAWSARLLPMLGLRLPLRPVRGYVLVTEPLPD----L 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 293 RELPVLRDleGSYYLRQERDG-LLFGPYESqekmklqdswvtdgvppgFGKELFESDLDRIMDHVEAAMDMVPVLRNADI 371
Cdd:COG0665 237 PLRPVLDD--TGVYLRPTADGrLLVGGTAE------------------PAGFDRAPTPERLEALLRRLRRLFPALADAEI 296
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1785338732 372 INIVSGPITYSPDILPMVGPHQGVQNYWVAIGF-GYGIIHAGGIGKFLSDWIMSGEPQFDLIELDPNR 438
Cdd:COG0665 297 VRAWAGLRPMTPDGLPIIGRLPGAPGLYVATGHgGHGVTLAPAAGRLLADLILGGEPPLDLAPFSPDR 364
|
|
| GCV_T |
pfam01571 |
Aminomethyltransferase folate-binding domain; This is a family of glycine cleavage T-proteins, ... |
495-752 |
9.92e-72 |
|
Aminomethyltransferase folate-binding domain; This is a family of glycine cleavage T-proteins, part of the glycine cleavage multienzyme complex (GCV) found in bacteria and the mitochondria of eukaryotes. GCV catalyzes the catabolism of glycine in eukaryotes. The T-protein is an aminomethyl transferase.
Pssm-ID: 460255 Cd Length: 254 Bit Score: 236.33 E-value: 9.92e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 495 AGWEQPHWFYKPGDdtgykpsfrrtnwfepvRREYKQVMEKVGVIDLTPFGKFTVKGKDSIHLLDHLFANTI--PKVGFT 572
Cdd:pfam01571 15 AGWEMPVQYGSNGI-----------------LAEHRAVREAAGLFDVSHMGKIEVSGPDAAAFLQRLTTNDVskLKPGRA 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 573 NISHILTPRGRVYAELTVSQLSPGEFLLITGSGSELHDLRWIEEVAVrgKYNTDIANVTDEIGVLGIAGPLARKVLQKLT 652
Cdd:pfam01571 78 TYTLMLNERGGVIDDLTVYRLGDDHFLLVVNAANREKDLAWLRKHAE--KLDVVVVDVTDDYALLALQGPKAREVLEKLT 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 653 PDDLgNTSFKFLQSRKLNIAGIPVTAIRISYTGELGWELYHKRQDTSALYRALMQAGQEEGIDNFGTYAMNALRLEKGFR 732
Cdd:pfam01571 156 DGDL-LEALPFFSFREIEIGGVPVRVSRTGYTGEDGFEIYVPAEDAVELWEALLEAGAELGLRPAGLGARDSLRLEAGLP 234
|
250 260
....*....|....*....|
gi 1785338732 733 AWGAEMNCDTNPLEAGLQYF 752
Cdd:pfam01571 235 LYGHDLDEETTPLEAGLGWA 254
|
|
| DAO |
pfam01266 |
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ... |
60-421 |
4.41e-65 |
|
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.
Pssm-ID: 426168 [Multi-domain] Cd Length: 339 Bit Score: 221.50 E-value: 4.41e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 60 VIIGGGCIGVSLAYHLAKAGMkDVVLLEK-SELTAGSTWHAAGLttyFHPGI------NLKKIHYYSIKLYERLEEETGQ 132
Cdd:pfam01266 3 VVIGGGIVGLSTAYELARRGL-SVTLLERgDDPGSGASGRNAGL---IHPGLrylepsELARLALEALDLWEELEEELGI 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 133 AVGFHQPGSIRIASTPTRvDELKHQMTRAHWHPTPQYLVEPEKVQELFPLLNmnKVLAGLYNPGDGHIDPYSLTMALAAG 212
Cdd:pfam01266 79 DCGFRRCGVLVLARDEEE-EALEKLLAALRRLGVPAELLDAEELRELEPLLP--GLRGGLFYPDGGHVDPARLLRALARA 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 213 ARKYGAQLYYPAEVTGlIPQPNGTWDVVTAhGTIHAnrIVNAAGFWAREVGkLIGLPHPLIPVHHQYVVTATVPEvKALN 292
Cdd:pfam01266 156 AEALGVRIIEGTEVTG-IEEEGGVWGVVTT-GEADA--VVNAAGAWADLLA-LPGLRLPVRPVRGQVLVLEPLPE-ALLI 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 293 RELPVLRDLEGSYYLRQERDG-LLFGPYEsqekmklqdswvtdgvpPGFGKELFESDLDRIMDHVEAAMDMVPVLrnADI 371
Cdd:pfam01266 230 LPVPITVDPGRGVYLRPRADGrLLLGGTD-----------------EEDGFDDPTPDPEEIEELLEAARRLFPAL--ADI 290
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 1785338732 372 INIVSGPITYsPDILPMVGPHqGVQNYWVAIGF-GYGIIHAGGIGKFLSDW 421
Cdd:pfam01266 291 ERAWAGLRPL-PDGLPIIGRP-GSPGLYLATGHgGHGLTLAPGIGKLLAEL 339
|
|
| gcvT |
PRK00389 |
glycine cleavage system aminomethyltransferase GcvT; |
481-855 |
4.43e-61 |
|
glycine cleavage system aminomethyltransferase GcvT;
Pssm-ID: 234742 [Multi-domain] Cd Length: 359 Bit Score: 211.13 E-value: 4.43e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 481 LYEELKTKcsMGFHAGWEQPHWFykpgddTGYKpsfrrtnwfepvrREYKQVMEKVGVIDLTPFGKFTVKGKDSIHLLDH 560
Cdd:PRK00389 10 LHVALGAK--MVDFGGWEMPVQY------GSII-------------EEHHAVRTDAGLFDVSHMGEVDVTGPDALAFLQY 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 561 LFANTIPK--VGFTNISHILTPRGRVYAELTVSQLSPGEFLLITGSGSELHDLRWIEEVAvrGKYNTDIANVTDEIGVLG 638
Cdd:PRK00389 69 LLANDVSKlkPGKAQYTCMLNEDGGVIDDLIVYKLSEDEYLLVVNAANREKDLAWIKSHA--AGFGVEVTDRSDDLAMIA 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 639 IAGPLARKVLQKLTPDDLgnTSFKFLQSRKL-NIAGIPVTAIRISYTGELGWELYHKRQDTSALYRALMQAGqeegIDNF 717
Cdd:PRK00389 147 VQGPKAREKLQKLTDADL--SELKPFFGAQGaEVGGGDVLVARTGYTGEDGFEIYLPAEDAEALWDALLEAG----VKPC 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 718 GTYAMNALRLEKGFRAWGAEMNCDTNPLEAGLQYFIKLNKPADFIGKQALTKIKEKGLQRKLVYLTLnTDNVDPEGNESV 797
Cdd:PRK00389 221 GLGARDTLRLEAGMPLYGQDMDETITPLEAGLGWTVKLEEKRDFIGREALEAQKEAGVERKLVGLEL-EERGIPRHGYPV 299
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 1785338732 798 WHNGKVVGNTTSGTYSYSTNQSLAFAYVPVELsttGQKLEVELLGNKYPATVIQEPLV 855
Cdd:PRK00389 300 LADGEEIGEVTSGTFSPTLGKSIALAYVPAGV---GDEVEVEIRGKQVPAKVVKPPFV 354
|
|
| FAO_M |
pfam16350 |
FAD dependent oxidoreductase central domain; This domain occurs in several FAD dependent ... |
425-479 |
4.87e-14 |
|
FAD dependent oxidoreductase central domain; This domain occurs in several FAD dependent oxidoreductases: Sarcosine dehydrogenase, Dimethylglycine dehydrogenase and Dimethylglycine dehydrogenase. It is situated between the DAO domain (pfam01266) and the GCV_T domain (pfam01571).
Pssm-ID: 465100 Cd Length: 56 Bit Score: 67.09 E-value: 4.87e-14
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 1785338732 425 GEPQFDLIELDPNRYGR-WTTTQYTALKARESYGFNNIVGYPKEERFAGRPTeRTS 479
Cdd:pfam16350 2 GEPPIDLWECDIRRFGPhQNNREYLRERVAENYGEVYDIHHPNEEREAGRPL-RTS 56
|
|
| solA |
PRK11259 |
N-methyl-L-tryptophan oxidase; |
60-438 |
9.46e-14 |
|
N-methyl-L-tryptophan oxidase;
Pssm-ID: 236887 [Multi-domain] Cd Length: 376 Bit Score: 73.72 E-value: 9.46e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 60 VIIGGGCIGVSLAYHLAKAGmKDVVLLEKSEL--TAGS-------TWHAaglttYF-HPGinlkkihyY------SIKLY 123
Cdd:PRK11259 7 IVIGLGSMGSAAGYYLARRG-LRVLGLDRFMPphQQGSshgdtriIRHA-----YGeGPA--------YvplvlrAQELW 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 124 ERLEEETGQAVgFHQPGSIRIAstPTRVDELKHQMTRAHWHPTPQYLVEPEKVQELFPLLNMNKVLAGLYNPGDGHIDPY 203
Cdd:PRK11259 73 RELERESGEPL-FVRTGVLNLG--PADSDFLANSIRSARQHGLPHEVLDAAEIRRRFPQFRLPDGYIALFEPDGGFLRPE 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 204 SLTMALAAGARKYGAQLYYPAEVTGLIPQPNGTwDVVTAHGTIHANRIVNAAGFWAREVGKLIGLphPLIPVHHQYVVTA 283
Cdd:PRK11259 150 LAIKAHLRLAREAGAELLFNEPVTAIEADGDGV-TVTTADGTYEAKKLVVSAGAWVKDLLPPLEL--PLTPVRQVLAWFQ 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 284 TVPEVKALNReLPVlrdlegsyYLRQERDGLLFgpYesqekmklqdswvtdGVPPG------FGKELF------ESDLDR 351
Cdd:PRK11259 227 ADGRYSEPNR-FPA--------FIWEVPDGDQY--Y---------------GFPAEngpglkIGKHNGgqeitsPDERDR 280
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 352 IMDHVEAAMDMVPVLRN--ADIINIVSGPI---TYSPDILPMVGPHQGVQNYWVAIGF-GYGIIHAGGIGKFLSDWIMSG 425
Cdd:PRK11259 281 FVTVAEDGAELRPFLRNylPGVGPCLRGAActyTNTPDEHFIIDTLPGHPNVLVASGCsGHGFKFASVLGEILADLAQDG 360
|
410
....*....|...
gi 1785338732 426 EPQFDLIELDPNR 438
Cdd:PRK11259 361 TSDFDLSPFSLSR 373
|
|
| soxA_mon |
TIGR01377 |
sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of ... |
58-439 |
3.89e-08 |
|
sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms [Energy metabolism, Amino acids and amines]
Pssm-ID: 130444 [Multi-domain] Cd Length: 380 Bit Score: 56.38 E-value: 3.89e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 58 ETVIIGGGCIGVSLAYHLAKAGMKdVVLLEKSEL--TAGS------TWHAAGLTTYFHPginlkkIHYYSIKLYERLEEE 129
Cdd:TIGR01377 2 DVIVVGAGIMGCFAAYHLAKHGKK-TLLLEQFDLphSRGSshgqsrIIRKAYPEDFYTP------MMLECYQLWAQLEKE 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 130 TGQAVgFHQPGSIRIAstPTRVDELKHQMTRAHWHPTPQYLVEPEKVQELFPLLNMNKVLAGLYNPGDGHIDPYSLTMAL 209
Cdd:TIGR01377 75 AGTKL-HRQTGLLLLG--PKENQFLKTIQATLSRHGLEHELLSSKQLKQRFPNIRVPRNEVGLLDPNGGVLYAEKALRAL 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 210 AAGARKYGAQLYYPAEVTGLIPQpNGTWDVVTAHGTIHANRIVNAAGFWAREVGKLIGLPHPLIP-----------VHHQ 278
Cdd:TIGR01377 152 QELAEAHGATVRDGTKVVEIEPT-ELLVTVKTTKGSYQANKLVVTAGAWTSKLLSPLGIEIPLQPlrinvcywrekEPGS 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 279 YVVTATVPEVKALnrelpvlrDLEGSYY--LRQERDGLLFGPYESQEkmklqdsWVT-DGVPPGFGKELfeSDLDRIMDH 355
Cdd:TIGR01377 231 YGVSQAFPCFLVL--------GLNPHIYglPSFEYPGLMKVYYHHGQ-------QIDpDERDCPFGADI--EDVQILRKF 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 356 VEaamDMVPVLrNADIINIVSGPITYSPDILPMVGPHQGVQNYWVAIGF-GYGIIHAGGIGKFLSDWIMSGEPQFDLIEL 434
Cdd:TIGR01377 294 VR---DHLPGL-NGEPKKGEVCMYTNTPDEHFVIDLHPKYDNVVIGAGFsGHGFKLAPVVGKILAELAMKLKPSYDLAIF 369
|
....*
gi 1785338732 435 DPNRY 439
Cdd:TIGR01377 370 SLNRF 374
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| GcvT |
COG0404 |
Glycine cleavage system protein T (aminomethyltransferase) [Amino acid transport and ... |
472-863 |
3.44e-120 |
|
Glycine cleavage system protein T (aminomethyltransferase) [Amino acid transport and metabolism]; Glycine cleavage system protein T (aminomethyltransferase) is part of the Pathway/BioSystem: Glycine cleavage
Pssm-ID: 440173 [Multi-domain] Cd Length: 372 Bit Score: 368.64 E-value: 3.44e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 472 GRPTERTS--GLYEELKTKcsMGFHAGWEQPHWFYkpgddtgykpsfrrtnwfEPVRREYKQVMEKVGVIDLTPFGKFTV 549
Cdd:COG0404 1 FRPLRRTPlhDRHVALGAK--FVDFGGWEMPVQYP------------------GGVIAEHLAVREAVGLFDVSHMGKIEV 60
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 550 KGKDSIHLLDHLFANTIPK--VGFTNISHILTPRGRVYAELTVSQLSPGEFLLITGSGSELHDLRWIEEVAVRGkYNTDI 627
Cdd:COG0404 61 TGPDAAAFLDRLVTNDVSKlkPGRARYTLMLNEDGGIIDDLTVYRLGEDRFLLVVNAANAAKDLAWLEEHLPPD-FDVTI 139
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 628 ANVTDEIGVLGIAGPLARKVLQKLTPDDLgnTSFKFLQSRKLNIAGIPVTAIRISYTGELGWELYHKRQDTSALYRALMQ 707
Cdd:COG0404 140 TDVTDDWALLAVQGPKAREVLAKLTDADL--SALPFMSFREGTVAGVPVRVSRTGYTGEDGFEIYVPAEDAEALWDALLE 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 708 AGQEEGIDNFGTYAMNALRLEKGFRAWGAEMNCDTNPLEAGLQYFIKLNKPaDFIGKQALTKIKEKGLQRKLVYLTLnTD 787
Cdd:COG0404 218 AGEEFGVKPCGLGARDTLRLEAGYPLYGHELDETTTPLEAGLGWAVKLDKG-DFIGKEALLRQKEEGPRRKLVGLEL-DG 295
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1785338732 788 NVDPEGNESVWHNGKVVGNTTSGTYSYSTNQSLAFAYVPVELSTTGQKLEVELLGNKYPATVIQEPLVltEPTRSR 863
Cdd:COG0404 296 RGVPRAGAPVLADGEVVGEVTSGTFSPTLGKSIALAYVPAGLARPGTELEVEIRGKRVPAEVVKPPFY--DPEGER 369
|
|
| DadA |
COG0665 |
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; |
56-438 |
5.55e-92 |
|
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
Pssm-ID: 440429 [Multi-domain] Cd Length: 364 Bit Score: 294.51 E-value: 5.55e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 56 TAETVIIGGGCIGVSLAYHLAKAGMkDVVLLEKSELTAGSTWHAAGL--TTYFHPGIN-LKKIHYYSIKLYERLEEETGQ 132
Cdd:COG0665 2 TADVVVIGGGIAGLSTAYHLARRGL-DVTVLERGRPGSGASGRNAGQlrPGLAALADRaLVRLAREALDLWRELAAELGI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 133 AVGFHQPGSIRIASTPTRVDELKHQMTRAHWHPTPQYLVEPEKVQELFPLLNMNKVLAGLYNPGDGHIDPYSLTMALAAG 212
Cdd:COG0665 81 DCDFRRTGVLYLARTEAELAALRAEAEALRALGLPVELLDAAELREREPGLGSPDYAGGLYDPDDGHVDPAKLVRALARA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 213 ARKYGAQLYYPAEVTGLIPQPNGTWDVVTAHGTIHANRIVNAAGFWAREVGKLIGLPHPLIPVHHQYVVTATVPEvkalN 292
Cdd:COG0665 161 ARAAGVRIREGTPVTGLEREGGRVTGVRTERGTVRADAVVLAAGAWSARLLPMLGLRLPLRPVRGYVLVTEPLPD----L 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 293 RELPVLRDleGSYYLRQERDG-LLFGPYESqekmklqdswvtdgvppgFGKELFESDLDRIMDHVEAAMDMVPVLRNADI 371
Cdd:COG0665 237 PLRPVLDD--TGVYLRPTADGrLLVGGTAE------------------PAGFDRAPTPERLEALLRRLRRLFPALADAEI 296
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1785338732 372 INIVSGPITYSPDILPMVGPHQGVQNYWVAIGF-GYGIIHAGGIGKFLSDWIMSGEPQFDLIELDPNR 438
Cdd:COG0665 297 VRAWAGLRPMTPDGLPIIGRLPGAPGLYVATGHgGHGVTLAPAAGRLLADLILGGEPPLDLAPFSPDR 364
|
|
| GCV_T |
pfam01571 |
Aminomethyltransferase folate-binding domain; This is a family of glycine cleavage T-proteins, ... |
495-752 |
9.92e-72 |
|
Aminomethyltransferase folate-binding domain; This is a family of glycine cleavage T-proteins, part of the glycine cleavage multienzyme complex (GCV) found in bacteria and the mitochondria of eukaryotes. GCV catalyzes the catabolism of glycine in eukaryotes. The T-protein is an aminomethyl transferase.
Pssm-ID: 460255 Cd Length: 254 Bit Score: 236.33 E-value: 9.92e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 495 AGWEQPHWFYKPGDdtgykpsfrrtnwfepvRREYKQVMEKVGVIDLTPFGKFTVKGKDSIHLLDHLFANTI--PKVGFT 572
Cdd:pfam01571 15 AGWEMPVQYGSNGI-----------------LAEHRAVREAAGLFDVSHMGKIEVSGPDAAAFLQRLTTNDVskLKPGRA 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 573 NISHILTPRGRVYAELTVSQLSPGEFLLITGSGSELHDLRWIEEVAVrgKYNTDIANVTDEIGVLGIAGPLARKVLQKLT 652
Cdd:pfam01571 78 TYTLMLNERGGVIDDLTVYRLGDDHFLLVVNAANREKDLAWLRKHAE--KLDVVVVDVTDDYALLALQGPKAREVLEKLT 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 653 PDDLgNTSFKFLQSRKLNIAGIPVTAIRISYTGELGWELYHKRQDTSALYRALMQAGQEEGIDNFGTYAMNALRLEKGFR 732
Cdd:pfam01571 156 DGDL-LEALPFFSFREIEIGGVPVRVSRTGYTGEDGFEIYVPAEDAVELWEALLEAGAELGLRPAGLGARDSLRLEAGLP 234
|
250 260
....*....|....*....|
gi 1785338732 733 AWGAEMNCDTNPLEAGLQYF 752
Cdd:pfam01571 235 LYGHDLDEETTPLEAGLGWA 254
|
|
| DAO |
pfam01266 |
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ... |
60-421 |
4.41e-65 |
|
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.
Pssm-ID: 426168 [Multi-domain] Cd Length: 339 Bit Score: 221.50 E-value: 4.41e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 60 VIIGGGCIGVSLAYHLAKAGMkDVVLLEK-SELTAGSTWHAAGLttyFHPGI------NLKKIHYYSIKLYERLEEETGQ 132
Cdd:pfam01266 3 VVIGGGIVGLSTAYELARRGL-SVTLLERgDDPGSGASGRNAGL---IHPGLrylepsELARLALEALDLWEELEEELGI 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 133 AVGFHQPGSIRIASTPTRvDELKHQMTRAHWHPTPQYLVEPEKVQELFPLLNmnKVLAGLYNPGDGHIDPYSLTMALAAG 212
Cdd:pfam01266 79 DCGFRRCGVLVLARDEEE-EALEKLLAALRRLGVPAELLDAEELRELEPLLP--GLRGGLFYPDGGHVDPARLLRALARA 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 213 ARKYGAQLYYPAEVTGlIPQPNGTWDVVTAhGTIHAnrIVNAAGFWAREVGkLIGLPHPLIPVHHQYVVTATVPEvKALN 292
Cdd:pfam01266 156 AEALGVRIIEGTEVTG-IEEEGGVWGVVTT-GEADA--VVNAAGAWADLLA-LPGLRLPVRPVRGQVLVLEPLPE-ALLI 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 293 RELPVLRDLEGSYYLRQERDG-LLFGPYEsqekmklqdswvtdgvpPGFGKELFESDLDRIMDHVEAAMDMVPVLrnADI 371
Cdd:pfam01266 230 LPVPITVDPGRGVYLRPRADGrLLLGGTD-----------------EEDGFDDPTPDPEEIEELLEAARRLFPAL--ADI 290
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 1785338732 372 INIVSGPITYsPDILPMVGPHqGVQNYWVAIGF-GYGIIHAGGIGKFLSDW 421
Cdd:pfam01266 291 ERAWAGLRPL-PDGLPIIGRP-GSPGLYLATGHgGHGLTLAPGIGKLLAEL 339
|
|
| gcvT |
PRK00389 |
glycine cleavage system aminomethyltransferase GcvT; |
481-855 |
4.43e-61 |
|
glycine cleavage system aminomethyltransferase GcvT;
Pssm-ID: 234742 [Multi-domain] Cd Length: 359 Bit Score: 211.13 E-value: 4.43e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 481 LYEELKTKcsMGFHAGWEQPHWFykpgddTGYKpsfrrtnwfepvrREYKQVMEKVGVIDLTPFGKFTVKGKDSIHLLDH 560
Cdd:PRK00389 10 LHVALGAK--MVDFGGWEMPVQY------GSII-------------EEHHAVRTDAGLFDVSHMGEVDVTGPDALAFLQY 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 561 LFANTIPK--VGFTNISHILTPRGRVYAELTVSQLSPGEFLLITGSGSELHDLRWIEEVAvrGKYNTDIANVTDEIGVLG 638
Cdd:PRK00389 69 LLANDVSKlkPGKAQYTCMLNEDGGVIDDLIVYKLSEDEYLLVVNAANREKDLAWIKSHA--AGFGVEVTDRSDDLAMIA 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 639 IAGPLARKVLQKLTPDDLgnTSFKFLQSRKL-NIAGIPVTAIRISYTGELGWELYHKRQDTSALYRALMQAGqeegIDNF 717
Cdd:PRK00389 147 VQGPKAREKLQKLTDADL--SELKPFFGAQGaEVGGGDVLVARTGYTGEDGFEIYLPAEDAEALWDALLEAG----VKPC 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 718 GTYAMNALRLEKGFRAWGAEMNCDTNPLEAGLQYFIKLNKPADFIGKQALTKIKEKGLQRKLVYLTLnTDNVDPEGNESV 797
Cdd:PRK00389 221 GLGARDTLRLEAGMPLYGQDMDETITPLEAGLGWTVKLEEKRDFIGREALEAQKEAGVERKLVGLEL-EERGIPRHGYPV 299
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 1785338732 798 WHNGKVVGNTTSGTYSYSTNQSLAFAYVPVELsttGQKLEVELLGNKYPATVIQEPLV 855
Cdd:PRK00389 300 LADGEEIGEVTSGTFSPTLGKSIALAYVPAGV---GDEVEVEIRGKQVPAKVVKPPFV 354
|
|
| LhgO |
COG0579 |
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism]; |
55-377 |
1.34e-35 |
|
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];
Pssm-ID: 440344 [Multi-domain] Cd Length: 418 Bit Score: 140.28 E-value: 1.34e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 55 DTAETVIIGGGCIGVSLAYHLAKAGMKDVVLLEK-SELTAGSTWHAAGLttyFHPGINLKKihyYSIK---------LYE 124
Cdd:COG0579 3 EMYDVVIIGAGIVGLALARELSRYEDLKVLVLEKeDDVAQESSGNNSGV---IHAGLYYTP---GSLKarlcvegneLFY 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 125 RLEEETGqaVGFHQPGSIRIASTPTRVDELKHQMTRAHWHPTPQY-LVEPEKVQELFPLLNmNKVLAGLYNPGDGHIDPY 203
Cdd:COG0579 77 ELCRELG--IPFKRCGKLVVATGEEEVAFLEKLYERGKANGVPGLeILDREELRELEPLLS-DEGVAALYSPSTGIVDPG 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 204 SLTMALAAGARKYGAQLYYPAEVTGLIPQPNGtWDVVTAHGTIHANRIVNAAGFWAREVGKLIGLPHP--LIPVHHQYVV 281
Cdd:COG0579 154 ALTRALAENAEANGVELLLNTEVTGIEREGDG-WEVTTNGGTIRARFVINAAGLYADRLAQMAGIGKDfgIFPVKGEYLV 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 282 TA-----------TVPEVKAlnrelP-----VLRDLEGSyylrqerdgLLFGPY--ESQEK----MKLQDSWVTDGVPPG 339
Cdd:COG0579 233 LDkpaelvnakvyPVPDPGA-----PflgvhLTRTIDGN---------LLFGPNavFVPKKedslLDLFESLRFPNFWPM 298
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1785338732 340 FGKE-----LFESDLDRIMDHVEAAMDMVPVLRNADIINIVSG 377
Cdd:COG0579 299 LAKNlltkyLESVTSLSKEAFLEALRKYVPELPDEDLIPAFAG 341
|
|
| PLN02319 |
PLN02319 |
aminomethyltransferase |
540-864 |
2.01e-29 |
|
aminomethyltransferase
Pssm-ID: 177953 [Multi-domain] Cd Length: 404 Bit Score: 121.75 E-value: 2.01e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 540 DLTPFGKFTVKGKDSIHLLDHLFANTIP--KVGFTNISHILTPRGRVYAELTVSQLSPGEFLLITGSGSELHDLRWIEE- 616
Cdd:PLN02319 79 DVSHMCGLSLKGKDAIPFLETLVVADIAglKDGTGTLSVFTNEKGGIIDDTVITKVTDDHIYLVVNAGCRDKDLAHIEEh 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 617 VAVRGKYNTDIA-NVTDEIGVLGIAGPLARKVLQKLTPDDLgnTSFKFLQSRKLNIAGIPVTAIRISYTGELGWELYHKR 695
Cdd:PLN02319 159 MKAFKAKGGDVSwHVHDERSLLALQGPLAAPVLQHLTKEDL--SKMYFGDFRITDINGADCFLTRTGYTGEDGFEISVPS 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 696 QDTSALYRALMqAGQEEGIDNFGTYAMNALRLEKGFRAWGAEMNCDTNPLEAGLQYFIKLNKPA--DFIGKQALTKIKEK 773
Cdd:PLN02319 237 EHAVDLAKALL-EKSEGKVRLTGLGARDSLRLEAGLCLYGNDLEEHITPVEAGLAWTIGKRRRAegGFLGADVILKQLKE 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 774 GLQRKLVYLTlNTDNVDPEGNESVWHNGKVVGNTTSGTYSYSTNQSLAFAYVPVELSTTGQKLEVELLGNKYPATVIQEP 853
Cdd:PLN02319 316 GVSRRRVGFI-SSGAPARSHSEILDESGEKIGEVTSGGFSPCLKKNIAMGYVKSGFHKAGTEVKVEVRGKMYDAVVTKMP 394
|
330
....*....|.
gi 1785338732 854 LVltePTRSRK 864
Cdd:PLN02319 395 FV---PTKYYK 402
|
|
| GCV_T_C |
pfam08669 |
Glycine cleavage T-protein C-terminal barrel domain; This is a family of glycine cleavage ... |
777-855 |
3.33e-25 |
|
Glycine cleavage T-protein C-terminal barrel domain; This is a family of glycine cleavage T-proteins, part of the glycine cleavage multienzyme complex (GCV) found in bacteria and the mitochondria of eukaryotes. GCV catalyzes the catabolism of glycine in eukaryotes. The T-protein is an aminomethyl transferase.
Pssm-ID: 462554 [Multi-domain] Cd Length: 80 Bit Score: 99.86 E-value: 3.33e-25
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1785338732 777 RKLVYLTLNTDNVDPEGNESVWHNGKVVGNTTSGTYSYSTNQSLAFAYVPVELSTTGQKLEVELLGNKYPATVIQEPLV 855
Cdd:pfam08669 1 RRLVGLELDDGDPLLRGGEPVLRDGEVVGYVTSGAYSPTLGKSIALAYVDAELAKPGTEVEVEIRGKRVPATVVKLPFY 79
|
|
| gcvT |
PRK13579 |
glycine cleavage system aminomethyltransferase GcvT; |
491-864 |
5.67e-24 |
|
glycine cleavage system aminomethyltransferase GcvT;
Pssm-ID: 237435 [Multi-domain] Cd Length: 370 Bit Score: 104.65 E-value: 5.67e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 491 MGFHAGWEQPHWfYKPGddtgykpsfrrtnwfepVRREYKQVMEKVGVIDLTPFGKFTVKGKDSIHLLDHLFANTIP--K 568
Cdd:PRK13579 25 MVPFAGYDMPVQ-YPAG-----------------VLKEHLHTRAHAGLFDVSHMGQIEVSGKDAAAALERLVPVDILalK 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 569 VGFTNISHILTPRGRVYAELTVSQLSpGEFLLITGSGSELHDLRWIEEVAVrgkyntDIANVT--DEIGVLGIAGPLARK 646
Cdd:PRK13579 87 EGRQRYTFFTNEQGGILDDLMVTNLG-DHLFLVVNAACKDADIAHLREHLS------DECEVNplDDRALLALQGPEAEA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 647 VLQKLTPDdlgNTSFKFLQSRKLNIAGIPVTAIRISYTGELGWELYHKRQDTSALYRALMQAGQEEGIdnfGTYAMNALR 726
Cdd:PRK13579 160 VLADLGPP---VAALRFMDGFEPRLHGVDCFVSRSGYTGEDGFEISVPADAAEALAEALLADPRVEPI---GLGARDSLR 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 727 LEKGFRAWGAEMNCDTNPLEAGLQYFIKLNK--PADFIGKQALTKIKEKGLQRKLVYLTlntdnvdPEGNESVWHN---- 800
Cdd:PRK13579 234 LEAGLCLYGHDIDTTTTPVEAALEWAIQKARreAGGFPGAKAILAALAKGASRRRVGLK-------PEGRAPVREGaplf 306
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1785338732 801 ---GKVVGNTTSGTYSYSTNQSLAFAYVPVELSTTGQKLEVELLGNKYPATVIQEPLVltePTRSRK 864
Cdd:PRK13579 307 ddaGTEIGTVTSGGFGPSVGGPVAMGYVPASLAAPGTAVFAEVRGKRLPVTVHALPFV---PHRYKR 370
|
|
| dmdA |
PRK12486 |
dimethylsulfoniopropionate demethylase; |
522-854 |
3.84e-20 |
|
dimethylsulfoniopropionate demethylase;
Pssm-ID: 237113 [Multi-domain] Cd Length: 368 Bit Score: 93.28 E-value: 3.84e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 522 FEPVRREYKQVMEKVGVIDLTPFGKFTVKGKDSIHLLdhlfantipkvgftnisHILTPRgrvyaelTVSQLSPGEFL-- 599
Cdd:PRK12486 40 FESVEDDYAHLKEHVQVWDVAVERQVEIRGPDAARLV-----------------QMLTPR-------DLRGMKPGQCYyv 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 600 -LITGSGSELHD--------------------LRWIEEVAVRGKYNTDIanVTDEIGVLGIAGPLARKVLQKLTPDDLgn 658
Cdd:PRK12486 96 pIVDETGGMLNDpvalklaedrwwisiadsdlLLWVKGLANGRKLDVLV--VEPDVSPLAVQGPKADALMARVFGEAI-- 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 659 TSFKFLQSRKLNIAGIPVTAIRISYTGELGWELY-HKRQDTSALYRALMQAGQEEgidNFGTYAMNAL-RLEKGFRAWGA 736
Cdd:PRK12486 172 RDLRFFRFGYFDFEGTDLVIARSGYSKQGGFEIYvEGSDLGMPLWDALFEAGKDL---NVRAGCPNLIeRIEGGLLSYGN 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 737 EMNCDTNPLEAGLQYFIKLNKPADFIGKQALTKIKEKGLQRKLVYLTLNTDNVDPEGneSVW---HNGKVVGNTTSGTYS 813
Cdd:PRK12486 249 DMTRDNTPHECGLGRFCNTQTDIGCIGKDALLRVAKEGPQKQIRGIKIGGERIPPCD--RAWpllAGDNRVGQVTSAAYS 326
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1785338732 814 YSTNQSLAFAYVPVELSTTGQKLEVELLGNKYPATViQEPL 854
Cdd:PRK12486 327 PDFQTNVAIGMVRMTHWDPGTGLEVETPDGMRPATV-REGF 366
|
|
| FAO_M |
pfam16350 |
FAD dependent oxidoreductase central domain; This domain occurs in several FAD dependent ... |
425-479 |
4.87e-14 |
|
FAD dependent oxidoreductase central domain; This domain occurs in several FAD dependent oxidoreductases: Sarcosine dehydrogenase, Dimethylglycine dehydrogenase and Dimethylglycine dehydrogenase. It is situated between the DAO domain (pfam01266) and the GCV_T domain (pfam01571).
Pssm-ID: 465100 Cd Length: 56 Bit Score: 67.09 E-value: 4.87e-14
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 1785338732 425 GEPQFDLIELDPNRYGR-WTTTQYTALKARESYGFNNIVGYPKEERFAGRPTeRTS 479
Cdd:pfam16350 2 GEPPIDLWECDIRRFGPhQNNREYLRERVAENYGEVYDIHHPNEEREAGRPL-RTS 56
|
|
| solA |
PRK11259 |
N-methyl-L-tryptophan oxidase; |
60-438 |
9.46e-14 |
|
N-methyl-L-tryptophan oxidase;
Pssm-ID: 236887 [Multi-domain] Cd Length: 376 Bit Score: 73.72 E-value: 9.46e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 60 VIIGGGCIGVSLAYHLAKAGmKDVVLLEKSEL--TAGS-------TWHAaglttYF-HPGinlkkihyY------SIKLY 123
Cdd:PRK11259 7 IVIGLGSMGSAAGYYLARRG-LRVLGLDRFMPphQQGSshgdtriIRHA-----YGeGPA--------YvplvlrAQELW 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 124 ERLEEETGQAVgFHQPGSIRIAstPTRVDELKHQMTRAHWHPTPQYLVEPEKVQELFPLLNMNKVLAGLYNPGDGHIDPY 203
Cdd:PRK11259 73 RELERESGEPL-FVRTGVLNLG--PADSDFLANSIRSARQHGLPHEVLDAAEIRRRFPQFRLPDGYIALFEPDGGFLRPE 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 204 SLTMALAAGARKYGAQLYYPAEVTGLIPQPNGTwDVVTAHGTIHANRIVNAAGFWAREVGKLIGLphPLIPVHHQYVVTA 283
Cdd:PRK11259 150 LAIKAHLRLAREAGAELLFNEPVTAIEADGDGV-TVTTADGTYEAKKLVVSAGAWVKDLLPPLEL--PLTPVRQVLAWFQ 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 284 TVPEVKALNReLPVlrdlegsyYLRQERDGLLFgpYesqekmklqdswvtdGVPPG------FGKELF------ESDLDR 351
Cdd:PRK11259 227 ADGRYSEPNR-FPA--------FIWEVPDGDQY--Y---------------GFPAEngpglkIGKHNGgqeitsPDERDR 280
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 352 IMDHVEAAMDMVPVLRN--ADIINIVSGPI---TYSPDILPMVGPHQGVQNYWVAIGF-GYGIIHAGGIGKFLSDWIMSG 425
Cdd:PRK11259 281 FVTVAEDGAELRPFLRNylPGVGPCLRGAActyTNTPDEHFIIDTLPGHPNVLVASGCsGHGFKFASVLGEILADLAQDG 360
|
410
....*....|...
gi 1785338732 426 EPQFDLIELDPNR 438
Cdd:PRK11259 361 TSDFDLSPFSLSR 373
|
|
| PRK11728 |
PRK11728 |
L-2-hydroxyglutarate oxidase; |
60-269 |
4.01e-10 |
|
L-2-hydroxyglutarate oxidase;
Pssm-ID: 183292 [Multi-domain] Cd Length: 393 Bit Score: 62.53 E-value: 4.01e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 60 VIIGGGCIGVSLAYHLAKA--GMKdVVLLEK-SELTAGSTWHAAGLttyFHPGInlkkihYY---SIKlyERLEEETGQA 133
Cdd:PRK11728 6 VIIGGGIVGLSTAMQLQERypGAR-IAVLEKeSGPARHQTGHNSGV---IHAGV------YYtpgSLK--ARFCRRGNEA 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 134 -VGFHQPGSIR--------IASTPTRVDELKHQMTRAHWHPTPQYLVEPEKVQELFPllNMNKvLAGLYNPGDGHIDPYS 204
Cdd:PRK11728 74 tKAFCDQHGIPyeecgkllVATSELELERMEALYERARANGIEVERLDAEELREREP--NIRG-LGAIFVPSTGIVDYRA 150
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1785338732 205 LTMALAAGARKYGAQLYYPAEVTGLIPQPNGTwDVVTAHGTIHANRIVNAAGFWAREVGKLIGLP 269
Cdd:PRK11728 151 VAEAMAELIQARGGEIRLGAEVTALDEHANGV-VVRTTQGEYEARTLINCAGLMSDRLAKMAGLE 214
|
|
| glpA |
PRK11101 |
anaerobic glycerol-3-phosphate dehydrogenase subunit A; |
56-262 |
2.80e-09 |
|
anaerobic glycerol-3-phosphate dehydrogenase subunit A;
Pssm-ID: 236847 [Multi-domain] Cd Length: 546 Bit Score: 60.42 E-value: 2.80e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 56 TAETVIIGGGCIGVSLAYHLAKAGMKdVVLLEKSELTAGSTWHAAGLttyFHPGINlkkihyYSIKLYERLEE--ETGQA 133
Cdd:PRK11101 6 ETDVIIIGGGATGAGIARDCALRGLR-CILVERHDIATGATGRNHGL---LHSGAR------YAVTDAESAREciSENQI 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 134 VGfhqpgsiRIAS---TPTR-------VDELKHQMT-----RAHWHPTPQylVEPEKVQELFPllNMNKVLAGLYNPGDG 198
Cdd:PRK11101 76 LK-------RIARhcvEPTDglfitlpEDDLAFQATfiracEEAGIEAEA--IDPQQALILEP--AVNPALIGAVKVPDG 144
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 199 HIDPYSLTMALAAGARKYGAQLYYPAEVTGLIPQPNGTWDV-VTAHGT-----IHANRIVNAAGFWAREV 262
Cdd:PRK11101 145 TVDPFRLTAANMLDAKEHGAQILTYHEVTGLIREGDTVCGVrVRDHLTgetqeIHAPVVVNAAGIWGQHI 214
|
|
| soxA_mon |
TIGR01377 |
sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of ... |
58-439 |
3.89e-08 |
|
sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms [Energy metabolism, Amino acids and amines]
Pssm-ID: 130444 [Multi-domain] Cd Length: 380 Bit Score: 56.38 E-value: 3.89e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 58 ETVIIGGGCIGVSLAYHLAKAGMKdVVLLEKSEL--TAGS------TWHAAGLTTYFHPginlkkIHYYSIKLYERLEEE 129
Cdd:TIGR01377 2 DVIVVGAGIMGCFAAYHLAKHGKK-TLLLEQFDLphSRGSshgqsrIIRKAYPEDFYTP------MMLECYQLWAQLEKE 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 130 TGQAVgFHQPGSIRIAstPTRVDELKHQMTRAHWHPTPQYLVEPEKVQELFPLLNMNKVLAGLYNPGDGHIDPYSLTMAL 209
Cdd:TIGR01377 75 AGTKL-HRQTGLLLLG--PKENQFLKTIQATLSRHGLEHELLSSKQLKQRFPNIRVPRNEVGLLDPNGGVLYAEKALRAL 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 210 AAGARKYGAQLYYPAEVTGLIPQpNGTWDVVTAHGTIHANRIVNAAGFWAREVGKLIGLPHPLIP-----------VHHQ 278
Cdd:TIGR01377 152 QELAEAHGATVRDGTKVVEIEPT-ELLVTVKTTKGSYQANKLVVTAGAWTSKLLSPLGIEIPLQPlrinvcywrekEPGS 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 279 YVVTATVPEVKALnrelpvlrDLEGSYY--LRQERDGLLFGPYESQEkmklqdsWVT-DGVPPGFGKELfeSDLDRIMDH 355
Cdd:TIGR01377 231 YGVSQAFPCFLVL--------GLNPHIYglPSFEYPGLMKVYYHHGQ-------QIDpDERDCPFGADI--EDVQILRKF 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 356 VEaamDMVPVLrNADIINIVSGPITYSPDILPMVGPHQGVQNYWVAIGF-GYGIIHAGGIGKFLSDWIMSGEPQFDLIEL 434
Cdd:TIGR01377 294 VR---DHLPGL-NGEPKKGEVCMYTNTPDEHFVIDLHPKYDNVVIGAGFsGHGFKLAPVVGKILAELAMKLKPSYDLAIF 369
|
....*
gi 1785338732 435 DPNRY 439
Cdd:TIGR01377 370 SLNRF 374
|
|
| PRK00711 |
PRK00711 |
D-amino acid dehydrogenase; |
60-275 |
6.93e-08 |
|
D-amino acid dehydrogenase;
Pssm-ID: 234819 [Multi-domain] Cd Length: 416 Bit Score: 55.58 E-value: 6.93e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 60 VIIGGGCIGVSLAYHLAKAGMKDVVL-------LEKSELTAG-------STWHAaglttyfhPGINLKKI---------- 115
Cdd:PRK00711 4 VVLGSGVIGVTSAWYLAQAGHEVTVIdrqpgpaLETSFANAGqispgyaAPWAA--------PGVPLKAIkwlfqrhapl 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 116 ------------------------HY------------YSIKLYERLEEETGQAVGFHQPGSIRIASTPTRVDELKHQM- 158
Cdd:PRK00711 76 airpdgdpfqlrwmwqmlrnctasRYavnksrmvrlaeYSRDCLKALRAETGIQYEGRQGGTLQLFRTQQQLDAAAKDIa 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 159 --TRAHwhpTPQYLVEPEKVQELFPLLN--MNKVLAGLYNPGDGHIDPYSLTMALAAGARKYGAQLYYPAEVTGLIPQPN 234
Cdd:PRK00711 156 vlEEAG---VPYELLDRDELAAVEPALAgvRHKLVGGLRLPNDETGDCQLFTQRLAAMAEQLGVKFRFNTPVDGLLVEGG 232
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 1785338732 235 GTWDVVTAHGTIHANRIVNAAGFWAREVGKLIGLPHPLIPV 275
Cdd:PRK00711 233 RITGVQTGGGVITADAYVVALGSYSTALLKPLGVDIPVYPL 273
|
|
| UbiH |
COG0654 |
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ... |
60-302 |
1.43e-07 |
|
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 440419 [Multi-domain] Cd Length: 326 Bit Score: 54.17 E-value: 1.43e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 60 VIIGGGCIGVSLAYHLAKAGMkDVVLLEKSELTAgstWHAAGLTtyfhpginlkkIHYYSIKLYERLeeetgqavGFHQp 139
Cdd:COG0654 7 LIVGGGPAGLALALALARAGI-RVTVVERAPPPR---PDGRGIA-----------LSPRSLELLRRL--------GLWD- 62
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 140 gsiriastptRVDELKHQMTRAHWHPTPQylvepekvqelfpllnmNKVLAGLYNPGDGHIDPYS-----LTMALAAGAR 214
Cdd:COG0654 63 ----------RLLARGAPIRGIRVRDGSD-----------------GRVLARFDAAETGLPAGLVvpradLERALLEAAR 115
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 215 KYGAQLYYPAEVTGLIPQPNGtWDVVTAHG-TIHANRIVNAAGFWAReVGKLIGLPHPLIPVHHQYVVTATVPEVKA-LN 292
Cdd:COG0654 116 ALGVELRFGTEVTGLEQDADG-VTVTLADGrTLRADLVVGADGARSA-VRRLLGIGFTGRDYPQRALWAGVRTELRArLA 193
|
250
....*....|
gi 1785338732 293 RELPVLRDLE 302
Cdd:COG0654 194 AAGPRLGELL 203
|
|
| mnmC |
PRK01747 |
bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent ... |
24-439 |
1.51e-07 |
|
bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;
Pssm-ID: 234978 [Multi-domain] Cd Length: 662 Bit Score: 55.24 E-value: 1.51e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 24 TAAAATRRSL-SAGPSTQ---G------------EEKQSAFLGKRWK------DTAETVIIGGGCIGVSLAYHLAKAGmK 81
Cdd:PRK01747 206 TSAGFVRRGLqEAGFTVRkvkGfgrkremlvgelEQTLPAPLAAPWFarpgspKARDAAIIGGGIAGAALALALARRG-W 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 82 DVVLLEK-SELTAGSTWHAAGLttyFHPGINLKKIHY---------YSIKLYERLEEEtGQAVGFHQPGSIRIAstptrV 151
Cdd:PRK01747 285 QVTLYEAdEAPAQGASGNRQGA---LYPLLSKDDNALsrffraaflFARRFYDALPAA-GVAFDHDWCGVLQLA-----W 355
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 152 DELK----HQMTRAHWhptPQYLVEPEKVQELFPLLNMNKVLAGLYNPGDGHIDPYSLTMALAAGArKYGAQLYYPAEVT 227
Cdd:PRK01747 356 DEKSaekiAKMLALGL---PAELARALDAEEAEELAGLPVPCGGIFYPQGGWLCPAELCRALLALA-GQQLTIHFGHEVA 431
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 228 GLIPQpNGTWDVVTAHGTIHANRIVNAAGfwAREVGKLIGLPH-PLIPVHHQyvVT--ATVPEVKALNREL-------PV 297
Cdd:PRK01747 432 RLERE-DDGWQLDFAGGTLASAPVVVLAN--GHDAARFAQTAHlPLYSVRGQ--VShlPTTPALSALKQVLcydgyltPQ 506
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 298 LRD---LEGSYYLRQERDgLLFGPYESQEkmklqdswvtdgvppgfgkelfesDLDRImdhveaaMDMVPVLRNADIINI 374
Cdd:PRK01747 507 PANgthCIGASYDRDDTD-TAFREADHQE------------------------NLERL-------AECLPQALWAKEVDV 554
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 375 --VSGPI---TYSPDILPMVGP----HQGVQNY------------------WVAIGFG-YGIIHAGGIGKFLSDWImSGE 426
Cdd:PRK01747 555 saLQGRVgfrCASRDRLPMVGNvpdeAATLAEYaalanqqpardaprlpglYVAGALGsRGLCSAPLGAELLASQI-EGE 633
|
490
....*....|....*..
gi 1785338732 427 P---QFDLIE-LDPNRY 439
Cdd:PRK01747 634 PlplERDLLAaLHPNRF 650
|
|
| GlpA |
COG0578 |
Glycerol-3-phosphate dehydrogenase [Energy production and conversion]; Glycerol-3-phosphate ... |
173-271 |
1.62e-06 |
|
Glycerol-3-phosphate dehydrogenase [Energy production and conversion]; Glycerol-3-phosphate dehydrogenase is part of the Pathway/BioSystem: Isoprenoid biosynthesis
Pssm-ID: 440343 [Multi-domain] Cd Length: 501 Bit Score: 51.67 E-value: 1.62e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 173 PEKVQELFPLLNMNKVLAG-LYnpGDGHIDPYSLTMALAAGARKYGAQL--YypAEVTGLIPQPNGTW-----DVVT-AH 243
Cdd:COG0578 107 RAEALALAPLLRPDGLRGGfEY--YDAQVDDARLVLELARTAAERGAVVlnY--TRVTGLLRDGGRVWgvtvrDRLTgEE 182
|
90 100
....*....|....*....|....*...
gi 1785338732 244 GTIHANRIVNAAGFWAREVGKLIGLPHP 271
Cdd:COG0578 183 FTVRARVVVNATGPWVDELRALDGPKAP 210
|
|
| SoxG |
COG4583 |
Sarcosine oxidase gamma subunit [Amino acid transport and metabolism]; |
579-711 |
2.45e-06 |
|
Sarcosine oxidase gamma subunit [Amino acid transport and metabolism];
Pssm-ID: 443640 Cd Length: 169 Bit Score: 48.32 E-value: 2.45e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 579 TPRGRVYAELTVSQLSPGEFLLItGSGSELHDLrwieEVAVRGKYNTDIANVTDEIG---VLGIAGPLARKVLQKLTPDD 655
Cdd:COG4583 39 PPRVAAAGGRAALWLGPDEWLLL-APYGAAEDL----AAALAAALAGLHAAVVDVSDgrtVFELSGPRARDVLAKLCPLD 113
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1785338732 656 LGNTSFK---FLQSRklnIAGIPVTAIRisyTGELGWELYHKRqdTSA--LYRALMQAGQE 711
Cdd:COG4583 114 LHPRAFPvgaAARTV---LAHVGVVLWR---TGEDRFRLLVRR--SFAdyLWHWLEDAARE 166
|
|
| NadB |
COG0029 |
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the ... |
53-101 |
3.65e-05 |
|
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the Pathway/BioSystem: NAD biosynthesis
Pssm-ID: 439800 [Multi-domain] Cd Length: 521 Bit Score: 47.41 E-value: 3.65e-05
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 1785338732 53 WKDTAETVIIGGGCIGVSLAYHLAKAGmkDVVLLEKSELTAGSTWHAAG 101
Cdd:COG0029 1 ERLKTDVLVIGSGIAGLSAALKLAERG--RVTLLTKGELGESNTRWAQG 47
|
|
| CzcO |
COG2072 |
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ... |
58-98 |
2.05e-04 |
|
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];
Pssm-ID: 441675 [Multi-domain] Cd Length: 414 Bit Score: 44.85 E-value: 2.05e-04
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 1785338732 58 ETVIIGGGCIGVSLAYHLAKAGMkDVVLLEKSElTAGSTWH 98
Cdd:COG2072 8 DVVVIGAGQAGLAAAYHLRRAGI-DFVVLEKAD-DVGGTWR 46
|
|
| FixC |
COG0644 |
Dehydrogenase (flavoprotein) [Energy production and conversion]; |
64-282 |
4.55e-04 |
|
Dehydrogenase (flavoprotein) [Energy production and conversion];
Pssm-ID: 440409 [Multi-domain] Cd Length: 281 Bit Score: 43.03 E-value: 4.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 64 GGCIGVSLAYHLAKAGMkDVVLLEKSEL-----TAGSTWhAAGLTTYFHPGINlkkihyysiklyERLEEE-TGQAVGFH 137
Cdd:COG0644 1 AGPAGSAAARRLARAGL-SVLLLEKGSFpgdkiCGGGLL-PRALEELEPLGLD------------EPLERPvRGARFYSP 66
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 138 QPGSIRIASTPTRVdelkHQMTRAHWHPtpqylvepekvqelfpllnmnkvlaglynpgdghidpysltmALAAGARKYG 217
Cdd:COG0644 67 GGKSVELPPGRGGG----YVVDRARFDR------------------------------------------WLAEQAEEAG 100
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1785338732 218 AQLYYPAEVTGLIPQpNGTWDVVTAHG-TIHANRIVNAAGFWAReVGKLIGLpHPLIPVHHQYVVT 282
Cdd:COG0644 101 AEVRTGTRVTDVLRD-DGRVVVRTGDGeEIRADYVVDADGARSL-LARKLGL-KRRSDEPQDYALA 163
|
|
| PRK07233 |
PRK07233 |
hypothetical protein; Provisional |
60-107 |
1.04e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 235977 [Multi-domain] Cd Length: 434 Bit Score: 42.57 E-value: 1.04e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 1785338732 60 VIIGGGCIGVSLAYHLAKAGmKDVVLLEKSELTAG--STWHAAGLT--TYFH 107
Cdd:PRK07233 3 AIVGGGIAGLAAAYRLAKRG-HEVTVFEADDQLGGlaASFEFGGLPieRFYH 53
|
|
| HemY |
COG1232 |
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ... |
59-90 |
1.39e-03 |
|
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis
Pssm-ID: 440845 [Multi-domain] Cd Length: 443 Bit Score: 42.13 E-value: 1.39e-03
10 20 30
....*....|....*....|....*....|..
gi 1785338732 59 TVIIGGGCIGVSLAYHLAKAGMkDVVLLEKSE 90
Cdd:COG1232 4 VAVIGGGIAGLTAAYRLAKAGH-EVTVLEASD 34
|
|
| GG-red-SF |
TIGR02032 |
geranylgeranyl reductase family; This model represents a subfamily which includes ... |
59-91 |
1.74e-03 |
|
geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]
Pssm-ID: 273936 [Multi-domain] Cd Length: 295 Bit Score: 41.15 E-value: 1.74e-03
10 20 30
....*....|....*....|....*....|...
gi 1785338732 59 TVIIGGGCIGVSLAYHLAKAGMkDVVLLEKSEL 91
Cdd:TIGR02032 3 VVVVGAGPAGASAAYRLADKGL-RVLLLEKKSF 34
|
|
| COG1233 |
COG1233 |
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ... |
60-259 |
2.62e-03 |
|
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 440846 [Multi-domain] Cd Length: 491 Bit Score: 41.37 E-value: 2.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 60 VIIGGGcI-GVSLAYHLAKAGmKDVVLLEKSELT---------------AGSTWH-----------AAGL---------- 102
Cdd:COG1233 7 VVIGAG-IgGLAAAALLARAG-YRVTVLEKNDTPggrartferpgfrfdVGPSVLtmpgvlerlfrELGLedylelvpld 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 103 TTYFHPGINLKKIHYYS--IKLYERLEEETG-----------QAVGFHQPGSIRIASTPtrVDELKHQMTRAHWHPTPQY 169
Cdd:COG1233 85 PAYRVPFPDGRALDLPRdlERTAAELERLFPgdaeayrrflaELRRLYDALLEDLLYRP--LLSLRDLLRPLALARLLRL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785338732 170 LVEP-----------EKVQELF------------------PLLNMNKVLAGLYNPgDGHIdpYSLTMALAAGARKYGAQL 220
Cdd:COG1233 163 LLRSlrdllrryfkdPRLRALLagqalylglspdrtpalyALIAYLEYAGGVWYP-KGGM--GALADALARLAEELGGEI 239
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 1785338732 221 YYPAEVTGLIPQPNGTWDVVTAHG-TIHANRIVNAAGFWA 259
Cdd:COG1233 240 RTGAEVERILVEGGRATGVRLADGeEIRADAVVSNADPAH 279
|
|
| |
