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Conserved domains on  [gi|551490474|ref|XP_005796809|]
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alpha-2,8-sialyltransferase 8F-like isoform X1 [Xiphophorus maculatus]

Protein Classification

glycosyltransferase family 29 protein (domain architecture ID 10466376)

glycosyltransferase family 29 protein similar to sialyltransferase 8F, an enzyme involved in protein glycosylation that prefers O-glycans to N-glycans or glycolipids as acceptor substrates

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Glyco_transf_29 pfam00777
Glycosyltransferase family 29 (sialyltransferase); Members of this family belong to ...
97-350 1.35e-98

Glycosyltransferase family 29 (sialyltransferase); Members of this family belong to glycosyltransferase family 29.


:

Pssm-ID: 395627  Cd Length: 267  Bit Score: 292.98  E-value: 1.35e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 551490474   97 IISQMNTPLGSKLVYD-GEKKRAAQINAELFSTFPK-VSPFSNKTMA---SCAVVGNGGILANSQCGKMIDSAEFVIRCN 171
Cdd:pfam00777   3 FLTKENFPLGEWLRYWwGEFKGSYKVLEELLKLLPKpDSPFENKRPDrcrRCAVVGNGGILRGSGCGKEIDSHDFVIRCN 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 551490474  172 LPPVsDGYEKHVGSKTNLVTVNP-SILLDKYGSLMTR--RRPFVEKLRNYGDSMMLLPAFSFgmNTPVSLRAFYTVE-DF 247
Cdd:pfam00777  83 LAPT-KGYEKDVGSKTTLRTMNPeSIIQSRFGKLKIPldRDVFLVLLPFKGRDFLWLPAFLT--KGEVSLGVRYFLWkRV 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 551490474  248 KS-----PIRPLFLNPQYLESLDVFW-KSQGVKAQRLSSGIMMISLALEICDNVHLYGFWPFSIHPHsfqdLSNHYYDDK 321
Cdd:pfam00777 160 KSyipadPDKVRILHPDFLRYVADFWlRSKGLKARRPSTGALALTLALHLCDEVSLYGFGPFLDSPG----NSYHYYDNK 235
                         250       260       270
                  ....*....|....*....|....*....|..
gi 551490474  322 QDKKNF---HAMPTEFNLLLKLHTQGVLHLHL 350
Cdd:pfam00777 236 MGAMRFtgvHDMPFEFKLLKKLHKEGVIKLHT 267
 
Name Accession Description Interval E-value
Glyco_transf_29 pfam00777
Glycosyltransferase family 29 (sialyltransferase); Members of this family belong to ...
97-350 1.35e-98

Glycosyltransferase family 29 (sialyltransferase); Members of this family belong to glycosyltransferase family 29.


Pssm-ID: 395627  Cd Length: 267  Bit Score: 292.98  E-value: 1.35e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 551490474   97 IISQMNTPLGSKLVYD-GEKKRAAQINAELFSTFPK-VSPFSNKTMA---SCAVVGNGGILANSQCGKMIDSAEFVIRCN 171
Cdd:pfam00777   3 FLTKENFPLGEWLRYWwGEFKGSYKVLEELLKLLPKpDSPFENKRPDrcrRCAVVGNGGILRGSGCGKEIDSHDFVIRCN 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 551490474  172 LPPVsDGYEKHVGSKTNLVTVNP-SILLDKYGSLMTR--RRPFVEKLRNYGDSMMLLPAFSFgmNTPVSLRAFYTVE-DF 247
Cdd:pfam00777  83 LAPT-KGYEKDVGSKTTLRTMNPeSIIQSRFGKLKIPldRDVFLVLLPFKGRDFLWLPAFLT--KGEVSLGVRYFLWkRV 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 551490474  248 KS-----PIRPLFLNPQYLESLDVFW-KSQGVKAQRLSSGIMMISLALEICDNVHLYGFWPFSIHPHsfqdLSNHYYDDK 321
Cdd:pfam00777 160 KSyipadPDKVRILHPDFLRYVADFWlRSKGLKARRPSTGALALTLALHLCDEVSLYGFGPFLDSPG----NSYHYYDNK 235
                         250       260       270
                  ....*....|....*....|....*....|..
gi 551490474  322 QDKKNF---HAMPTEFNLLLKLHTQGVLHLHL 350
Cdd:pfam00777 236 MGAMRFtgvHDMPFEFKLLKKLHKEGVIKLHT 267
 
Name Accession Description Interval E-value
Glyco_transf_29 pfam00777
Glycosyltransferase family 29 (sialyltransferase); Members of this family belong to ...
97-350 1.35e-98

Glycosyltransferase family 29 (sialyltransferase); Members of this family belong to glycosyltransferase family 29.


Pssm-ID: 395627  Cd Length: 267  Bit Score: 292.98  E-value: 1.35e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 551490474   97 IISQMNTPLGSKLVYD-GEKKRAAQINAELFSTFPK-VSPFSNKTMA---SCAVVGNGGILANSQCGKMIDSAEFVIRCN 171
Cdd:pfam00777   3 FLTKENFPLGEWLRYWwGEFKGSYKVLEELLKLLPKpDSPFENKRPDrcrRCAVVGNGGILRGSGCGKEIDSHDFVIRCN 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 551490474  172 LPPVsDGYEKHVGSKTNLVTVNP-SILLDKYGSLMTR--RRPFVEKLRNYGDSMMLLPAFSFgmNTPVSLRAFYTVE-DF 247
Cdd:pfam00777  83 LAPT-KGYEKDVGSKTTLRTMNPeSIIQSRFGKLKIPldRDVFLVLLPFKGRDFLWLPAFLT--KGEVSLGVRYFLWkRV 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 551490474  248 KS-----PIRPLFLNPQYLESLDVFW-KSQGVKAQRLSSGIMMISLALEICDNVHLYGFWPFSIHPHsfqdLSNHYYDDK 321
Cdd:pfam00777 160 KSyipadPDKVRILHPDFLRYVADFWlRSKGLKARRPSTGALALTLALHLCDEVSLYGFGPFLDSPG----NSYHYYDNK 235
                         250       260       270
                  ....*....|....*....|....*....|..
gi 551490474  322 QDKKNF---HAMPTEFNLLLKLHTQGVLHLHL 350
Cdd:pfam00777 236 MGAMRFtgvHDMPFEFKLLKKLHKEGVIKLHT 267
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.19
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
  • Marchler-Bauer A et al. (2015), "CDD: NCBI's conserved domain database.", Nucleic Acids Res.43(D)222-6.
  • Marchler-Bauer A et al. (2011), "CDD: a Conserved Domain Database for the functional annotation of proteins.", Nucleic Acids Res.39(D)225-9.
  • Marchler-Bauer A, Bryant SH (2004), "CD-Search: protein domain annotations on the fly.", Nucleic Acids Res.32(W)327-331.
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