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Conserved domains on  [gi|568913036|ref|XP_006497790|]
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interleukin-1 receptor antagonist protein isoform X1 [Mus musculus]

Protein Classification

IL1 domain-containing protein( domain architecture ID 10639008)

IL1 domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
IL1 smart00125
Interleukin-1 homologues; Cytokines with various biological functions. Interluekin 1 alpha and ...
1-140 7.02e-74

Interleukin-1 homologues; Cytokines with various biological functions. Interluekin 1 alpha and beta are also known as hematopoietin and catabolin.


:

Pssm-ID: 128430  Cd Length: 147  Bit Score: 216.86  E-value: 7.02e-74
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568913036     1 MQAFRIWDTNQKTFYLRN-NQLIAGYLQGPNIKLEEKIDMVPIDLHS------VFLGIHGGKLCLSCAKSGDDIKLQLEE 73
Cdd:smart00125   3 SQECRLNDANQKSLVLSNpQYLKALHLNGQNLNQEVKFDMSFVQGEEddskipVTLGISGTNLYLSCVKKGDEPTLQLEM 82
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568913036    74 VNITDLSKnKEEDKRFTFIRSEKGPTTSFESAACPGWFLCTTLEADRPVSLTNTPEEpLIVTKFYFQ 140
Cdd:smart00125  83 VDPPKYPK-KEMEKRFVFEKHEIGNKVEFESAAHPNWFISTSQEEDKPVFLGNGPPS-QDITDFQME 147
 
Name Accession Description Interval E-value
IL1 smart00125
Interleukin-1 homologues; Cytokines with various biological functions. Interluekin 1 alpha and ...
1-140 7.02e-74

Interleukin-1 homologues; Cytokines with various biological functions. Interluekin 1 alpha and beta are also known as hematopoietin and catabolin.


Pssm-ID: 128430  Cd Length: 147  Bit Score: 216.86  E-value: 7.02e-74
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568913036     1 MQAFRIWDTNQKTFYLRN-NQLIAGYLQGPNIKLEEKIDMVPIDLHS------VFLGIHGGKLCLSCAKSGDDIKLQLEE 73
Cdd:smart00125   3 SQECRLNDANQKSLVLSNpQYLKALHLNGQNLNQEVKFDMSFVQGEEddskipVTLGISGTNLYLSCVKKGDEPTLQLEM 82
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568913036    74 VNITDLSKnKEEDKRFTFIRSEKGPTTSFESAACPGWFLCTTLEADRPVSLTNTPEEpLIVTKFYFQ 140
Cdd:smart00125  83 VDPPKYPK-KEMEKRFVFEKHEIGNKVEFESAAHPNWFISTSQEEDKPVFLGNGPPS-QDITDFQME 147
IL1 cd00100
Interleukin-1 homologes; Cytokines with various biological functions. Interleukin 1 alpha and ...
3-140 1.02e-70

Interleukin-1 homologes; Cytokines with various biological functions. Interleukin 1 alpha and beta are also known as hematopoietin and catabolin. This family also contains interleukin-1 receptor antagonists (inhibitors).


Pssm-ID: 238048  Cd Length: 144  Bit Score: 208.83  E-value: 1.02e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568913036   3 AFRIWDTNQKTFYLRNN-QLIAGYLQGPNIKLEEKIDMVPI------DLHSVFLGIHGGKLCLSCAKSGDDIKLQLEEVN 75
Cdd:cd00100    1 EFRLNDANQKSLVLSNPqYLKAAHLQGQNLNLEVKFDMSFYqgeesdSKIPVTLGISKTNLYLSCVKEGDDPPLQLEEVP 80
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568913036  76 ITDLSKNKEEDKRFTFIRSEKGPTTSFESAACPGWFLCTTLEADRPVSLTNTPEEPLIvTKFYFQ 140
Cdd:cd00100   81 PKDYPKKKITEKRFVFFWEEIGNKNYFESAAFPNWFIATKQEEDKPVFLANGPGGPSI-TDFQIQ 144
IL1 pfam00340
Interleukin-1 / 18; This family includes interleukin-1 and interleukin-18.
26-139 2.39e-51

Interleukin-1 / 18; This family includes interleukin-1 and interleukin-18.


Pssm-ID: 395269  Cd Length: 119  Bit Score: 159.15  E-value: 2.39e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568913036   26 LQGPNIKLEEKIDMVPIDLHS------VFLGIHGGKLCLSCAKSgDDIKLQLEEVNITDLSKNKEEDKRFTFIRSEKGPT 99
Cdd:pfam00340   1 LQGQNLNLEVKFDMSFYKGDSddskipVTLGIKGKKLYLSCVNK-DEPVLQLEEVNIPKLIKNKESDKRFFFIRSESKNY 79
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 568913036  100 TSFESAACPGWFLCTTLEADRPVSLTNTPEEPLIVTKFYF 139
Cdd:pfam00340  80 VEFESAAYPGWFIATKQEEDLPVFLVNTAGGQDSITDFQI 119
PHA02651 PHA02651
IL-1 receptor antagonist; Provisional
1-142 2.08e-33

IL-1 receptor antagonist; Provisional


Pssm-ID: 165031  Cd Length: 165  Bit Score: 115.13  E-value: 2.08e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568913036   1 MQAFRIWDTNQKTFYLRNNQLIAGYLQgpNIKLEEKIDMVPIDLHSVFLGIHGGKLCLSCAKSGDDIKLQLEEVNITDLS 80
Cdd:PHA02651  22 MFMYNIWDVNQKIFYLRNNQLVAGHIQ--DNSLAEKITAKLIDGNDIFLGVKNGEKSLECTEHGDKVTLSLSDKKTNSLD 99
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568913036  81 KNkeEDKRFTFIRSEKGPTTSFESAACPGWFLCTTL-EADRPVSLT-------NTPEEPLIVtkFYFQED 142
Cdd:PHA02651 100 EN--QDKRFAFIRSDNGHTSTFESVAFPGWFLCTSSgDGIEPVGLTykgdkddNDDDENNIY--FYFEED 165
 
Name Accession Description Interval E-value
IL1 smart00125
Interleukin-1 homologues; Cytokines with various biological functions. Interluekin 1 alpha and ...
1-140 7.02e-74

Interleukin-1 homologues; Cytokines with various biological functions. Interluekin 1 alpha and beta are also known as hematopoietin and catabolin.


Pssm-ID: 128430  Cd Length: 147  Bit Score: 216.86  E-value: 7.02e-74
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568913036     1 MQAFRIWDTNQKTFYLRN-NQLIAGYLQGPNIKLEEKIDMVPIDLHS------VFLGIHGGKLCLSCAKSGDDIKLQLEE 73
Cdd:smart00125   3 SQECRLNDANQKSLVLSNpQYLKALHLNGQNLNQEVKFDMSFVQGEEddskipVTLGISGTNLYLSCVKKGDEPTLQLEM 82
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568913036    74 VNITDLSKnKEEDKRFTFIRSEKGPTTSFESAACPGWFLCTTLEADRPVSLTNTPEEpLIVTKFYFQ 140
Cdd:smart00125  83 VDPPKYPK-KEMEKRFVFEKHEIGNKVEFESAAHPNWFISTSQEEDKPVFLGNGPPS-QDITDFQME 147
IL1 cd00100
Interleukin-1 homologes; Cytokines with various biological functions. Interleukin 1 alpha and ...
3-140 1.02e-70

Interleukin-1 homologes; Cytokines with various biological functions. Interleukin 1 alpha and beta are also known as hematopoietin and catabolin. This family also contains interleukin-1 receptor antagonists (inhibitors).


Pssm-ID: 238048  Cd Length: 144  Bit Score: 208.83  E-value: 1.02e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568913036   3 AFRIWDTNQKTFYLRNN-QLIAGYLQGPNIKLEEKIDMVPI------DLHSVFLGIHGGKLCLSCAKSGDDIKLQLEEVN 75
Cdd:cd00100    1 EFRLNDANQKSLVLSNPqYLKAAHLQGQNLNLEVKFDMSFYqgeesdSKIPVTLGISKTNLYLSCVKEGDDPPLQLEEVP 80
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568913036  76 ITDLSKNKEEDKRFTFIRSEKGPTTSFESAACPGWFLCTTLEADRPVSLTNTPEEPLIvTKFYFQ 140
Cdd:cd00100   81 PKDYPKKKITEKRFVFFWEEIGNKNYFESAAFPNWFIATKQEEDKPVFLANGPGGPSI-TDFQIQ 144
IL1 pfam00340
Interleukin-1 / 18; This family includes interleukin-1 and interleukin-18.
26-139 2.39e-51

Interleukin-1 / 18; This family includes interleukin-1 and interleukin-18.


Pssm-ID: 395269  Cd Length: 119  Bit Score: 159.15  E-value: 2.39e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568913036   26 LQGPNIKLEEKIDMVPIDLHS------VFLGIHGGKLCLSCAKSgDDIKLQLEEVNITDLSKNKEEDKRFTFIRSEKGPT 99
Cdd:pfam00340   1 LQGQNLNLEVKFDMSFYKGDSddskipVTLGIKGKKLYLSCVNK-DEPVLQLEEVNIPKLIKNKESDKRFFFIRSESKNY 79
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 568913036  100 TSFESAACPGWFLCTTLEADRPVSLTNTPEEPLIVTKFYF 139
Cdd:pfam00340  80 VEFESAAYPGWFIATKQEEDLPVFLVNTAGGQDSITDFQI 119
PHA02651 PHA02651
IL-1 receptor antagonist; Provisional
1-142 2.08e-33

IL-1 receptor antagonist; Provisional


Pssm-ID: 165031  Cd Length: 165  Bit Score: 115.13  E-value: 2.08e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568913036   1 MQAFRIWDTNQKTFYLRNNQLIAGYLQgpNIKLEEKIDMVPIDLHSVFLGIHGGKLCLSCAKSGDDIKLQLEEVNITDLS 80
Cdd:PHA02651  22 MFMYNIWDVNQKIFYLRNNQLVAGHIQ--DNSLAEKITAKLIDGNDIFLGVKNGEKSLECTEHGDKVTLSLSDKKTNSLD 99
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568913036  81 KNkeEDKRFTFIRSEKGPTTSFESAACPGWFLCTTL-EADRPVSLT-------NTPEEPLIVtkFYFQED 142
Cdd:PHA02651 100 EN--QDKRFAFIRSDNGHTSTFESVAFPGWFLCTSSgDGIEPVGLTykgdkddNDDDENNIY--FYFEED 165
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.20
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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