|
Name |
Accession |
Description |
Interval |
E-value |
| Tryp_SPc |
smart00020 |
Trypsin-like serine protease; Many of these are synthesised as inactive precursor zymogens ... |
319-548 |
3.43e-99 |
|
Trypsin-like serine protease; Many of these are synthesised as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. A few, however, are active as single chain molecules, and others are inactive due to substitutions of the catalytic triad residues.
Pssm-ID: 214473 Cd Length: 229 Bit Score: 299.98 E-value: 3.43e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 319 RIVGGALTSESKWPWQVSLHF-GTTHICGGTLIDAQWVLTAAHCFfvtREKLLEGWKVYAGTSNLHQLPEA--ASISQII 395
Cdd:smart00020 1 RIVGGSEANIGSFPWQVSLQYgGGRHFCGGSLISPRWVLTAAHCV---RGSDPSNIRVRLGSHDLSSGEEGqvIKVSKVI 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 396 INGNYTDEQDDYDIALIRLSKPLTLSAHIHPACLPMHGQTFGLNETCWITGFGKTKETDEKTSPFLREVQVNLIDFKKCN 475
Cdd:smart00020 78 IHPNYNPSTYDNDIALLKLKEPVTLSDNVRPICLPSSNYNVPAGTTCTVSGWGRTSEGAGSLPDTLQEVNVPIVSNATCR 157
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568959093 476 DYLVYDSYLTPRMMCAGDLRGGRDSCQGDSGGPLVCeQNNRWYLAGVTSWGTGCGQKNKPGVYTKVTEVLPWI 548
Cdd:smart00020 158 RAYSGGGAITDNMLCAGGLEGGKDACQGDSGGPLVC-NDGRWVLVGIVSWGSGCARPGKPGVYTRVSSYLDWI 229
|
|
| Tryp_SPc |
cd00190 |
Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens ... |
320-548 |
8.74e-97 |
|
Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad residues.
Pssm-ID: 238113 [Multi-domain] Cd Length: 232 Bit Score: 293.80 E-value: 8.74e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 320 IVGGALTSESKWPWQVSLHFGT-THICGGTLIDAQWVLTAAHCFfvtREKLLEGWKVYAGTSNLHQLPE---AASISQII 395
Cdd:cd00190 1 IVGGSEAKIGSFPWQVSLQYTGgRHFCGGSLISPRWVLTAAHCV---YSSAPSNYTVRLGSHDLSSNEGggqVIKVKKVI 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 396 INGNYTDEQDDYDIALIRLSKPLTLSAHIHPACLPMHGQTFGLNETCWITGFGKTKETDeKTSPFLREVQVNLIDFKKCN 475
Cdd:cd00190 78 VHPNYNPSTYDNDIALLKLKRPVTLSDNVRPICLPSSGYNLPAGTTCTVSGWGRTSEGG-PLPDVLQEVNVPIVSNAECK 156
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568959093 476 DYLVYDSYLTPRMMCAGDLRGGRDSCQGDSGGPLVCEQNNRWYLAGVTSWGTGCGQKNKPGVYTKVTEVLPWI 548
Cdd:cd00190 157 RAYSYGGTITDNMLCAGGLEGGKDACQGDSGGPLVCNDNGRGVLVGIVSWGSGCARPNYPGVYTRVSSYLDWI 229
|
|
| Trypsin |
pfam00089 |
Trypsin; |
320-548 |
1.52e-69 |
|
Trypsin;
Pssm-ID: 459667 [Multi-domain] Cd Length: 219 Bit Score: 223.09 E-value: 1.52e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 320 IVGGALTSESKWPWQVSLHFGT-THICGGTLIDAQWVLTAAHCFfvtreKLLEGWKVYAGTSNLHQLPEA---ASISQII 395
Cdd:pfam00089 1 IVGGDEAQPGSFPWQVSLQLSSgKHFCGGSLISENWVLTAAHCV-----SGASDVKVVLGAHNIVLREGGeqkFDVEKII 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 396 INGNYTDEQDDYDIALIRLSKPLTLSAHIHPACLPMHGQTFGLNETCWITGFGKTKETDEKTSpfLREVQVNLIDFKKCN 475
Cdd:pfam00089 76 VHPNYNPDTLDNDIALLKLESPVTLGDTVRPICLPDASSDLPVGTTCTVSGWGNTKTLGPSDT--LQEVTVPVVSRETCR 153
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568959093 476 DYlvYDSYLTPRMMCAGDlrGGRDSCQGDSGGPLVCEQNnrwYLAGVTSWGTGCGQKNKPGVYTKVTEVLPWI 548
Cdd:pfam00089 154 SA--YGGTVTDTMICAGA--GGKDACQGDSGGPLVCSDG---ELIGIVSWGYGCASGNYPGVYTPVSSYLDWI 219
|
|
| COG5640 |
COG5640 |
Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, ... |
311-548 |
2.90e-69 |
|
Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 444365 [Multi-domain] Cd Length: 262 Bit Score: 223.76 E-value: 2.90e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 311 CGLRAMTGRIVGGALTSESKWPWQVSLHF---GTTHICGGTLIDAQWVLTAAHCFFVTReklLEGWKVYAGTSNLH-QLP 386
Cdd:COG5640 22 APAADAAPAIVGGTPATVGEYPWMVALQSsngPSGQFCGGTLIAPRWVLTAAHCVDGDG---PSDLRVVIGSTDLStSGG 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 387 EAASISQIIINGNYTDEQDDYDIALIRLSKPLTLSAhihPACLPMHGQTFGLNETCWITGFGKTKETDEKTSPFLREVQV 466
Cdd:COG5640 99 TVVKVARIVVHPDYDPATPGNDIALLKLATPVPGVA---PAPLATSADAAAPGTPATVAGWGRTSEGPGSQSGTLRKADV 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 467 NLIDFKKCNdylVYDSYLTPRMMCAGDLRGGRDSCQGDSGGPLVCEQNNRWYLAGVTSWGTGCGQKNKPGVYTKVTEVLP 546
Cdd:COG5640 176 PVVSDATCA---AYGGFDGGTMLCAGYPEGGKDACQGDSGGPLVVKDGGGWVLVGVVSWGGGPCAAGYPGVYTRVSAYRD 252
|
..
gi 568959093 547 WI 548
Cdd:COG5640 253 WI 254
|
|
| SRCR_2 |
pfam15494 |
Scavenger receptor cysteine-rich domain; SRCR_2 is a scavenger receptor cysteine-rich domain ... |
225-315 |
8.54e-29 |
|
Scavenger receptor cysteine-rich domain; SRCR_2 is a scavenger receptor cysteine-rich domain family found largely on vertebrate sequences up-stream of the trypsin-like transmembrane serine protease, Spinesin.
Pssm-ID: 464747 Cd Length: 99 Bit Score: 109.73 E-value: 8.54e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 225 WDKSLLKVYSGSSGEWLPVCSSSWNDTDSKRTCQQLGFDSAYRTTEVAHRDITSSF-------LLSEYNTTIQESLY-RS 296
Cdd:pfam15494 1 GENFLLQVYSSARPSWLPVCSDDWNPAYGRAACQQLGYLRLTHHKSVNLTDISSNSsqsfmklNSSSLNTDLYEALQpRD 80
|
90
....*....|....*....
gi 568959093 297 QCPSRRYVSLQCSHCGLRA 315
Cdd:pfam15494 81 SCSSGSVVSLRCSECGLRS 99
|
|
| eMpr |
COG3591 |
V8-like Glu-specific endopeptidase [Posttranslational modification, protein turnover, ... |
340-528 |
2.78e-14 |
|
V8-like Glu-specific endopeptidase [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 442810 [Multi-domain] Cd Length: 194 Bit Score: 71.63 E-value: 2.78e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 340 GTTHICGGTLIDAQWVLTAAHCFF-VTREKLLEGWKVYAGTSNLHqlPEAASISQIIINGNYTDEQD-DYDIALIRLSKP 417
Cdd:COG3591 9 GGGGVCTGTLIGPNLVLTAGHCVYdGAGGGWATNIVFVPGYNGGP--YGTATATRFRVPPGWVASGDaGYDYALLRLDEP 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 418 LTLSA---HIHPACLPMHGQTFglnetcWITGFGKtketDEKTSPFLRevqvnlidfkkCNDYLVYDSyltprmmcAGDL 494
Cdd:COG3591 87 LGDTTgwlGLAFNDAPLAGEPV------TIIGYPG----DRPKDLSLD-----------CSGRVTGVQ--------GNRL 137
|
170 180 190
....*....|....*....|....*....|....
gi 568959093 495 RGGRDSCQGDSGGPLVCEQNNRWYLAGVTSWGTG 528
Cdd:COG3591 138 SYDCDTTGGSSGSPVLDDSDGGGRVVGVHSAGGA 171
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
6-122 |
2.57e-12 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 69.71 E-value: 2.57e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 6 HRNSSPARTPPQAS-PARTSPARA-PPQASPAR-TPPQASPTRT-PPQASPARAPPPQASPARASPARASLARAPPsrss 81
Cdd:PHA03378 671 HIPYQPSPTGANTMlPIQWAPGTMqPPPRAPTPmRPPAAPPGRAqRPAAATGRARPPAAAPGRARPPAAAPGRARP---- 746
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 568959093 82 sgrsssarsasTTSSPTRVYLVRATPVGAVPIRASPARSAP 122
Cdd:PHA03378 747 -----------PAAAPGRARPPAAAPGRARPPAAAPGAPTP 776
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
11-131 |
6.76e-12 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 68.56 E-value: 6.76e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 11 PARTPPQASPARTSPARAPPQASPART----PPQASPTRT-PPQASPARAPPPQASPARASPARASLARAPPSRSSSGRS 85
Cdd:PHA03378 655 PQVEITPYKPTWTQIGHIPYQPSPTGAntmlPIQWAPGTMqPPPRAPTPMRPPAAPPGRAQRPAAATGRARPPAAAPGRA 734
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 568959093 86 SSARSASTTSSPTRVYLVRATPVGAVPIRASPARSAPATRATRESP 131
Cdd:PHA03378 735 RPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGAPTPQPPP 780
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
7-136 |
9.47e-12 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 68.17 E-value: 9.47e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 7 RNSSPARTPPQASPARTSPARA-PPQASPART-PPQASPTRT-PPQASPARAPPPQASPARASPARASLARAPPsrSSSG 83
Cdd:PHA03378 693 TMQPPPRAPTPMRPPAAPPGRAqRPAAATGRArPPAAAPGRArPPAAAPGRARPPAAAPGRARPPAAAPGRARP--PAAA 770
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 568959093 84 RSSSARSASTTSSPTRVYLVRATPVGAVPIRASParsAPATRATRESPGLSFP 136
Cdd:PHA03378 771 PGAPTPQPPPQAPPAPQQRPRGAPTPQPPPQAGP---TSMQLMPRAAPGQQGP 820
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
9-131 |
2.62e-11 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 66.63 E-value: 2.62e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 9 SSPARTPPQASPARTSPARaPPQASPART-PPQASPTR-TPPQASPARAPPPQASPARASPARASLARAPPSRSSSGRSS 86
Cdd:PHA03378 667 TQIGHIPYQPSPTGANTML-PIQWAPGTMqPPPRAPTPmRPPAAPPGRAQRPAAATGRARPPAAAPGRARPPAAAPGRAR 745
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 568959093 87 SARSASTTSSPTRVYLVRATPVGAVPIRASPARSAPATRATRESP 131
Cdd:PHA03378 746 PPAAAPGRARPPAAAPGRARPPAAAPGAPTPQPPPQAPPAPQQRP 790
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
7-129 |
3.90e-11 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 65.86 E-value: 3.90e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 7 RNSSPARtPPQASPARTSPARA------PPQASPART-PPQASPTRT-PPQASPARAPPPQASPARASPARASLARAPPS 78
Cdd:PHA03378 699 RAPTPMR-PPAAPPGRAQRPAAatgrarPPAAAPGRArPPAAAPGRArPPAAAPGRARPPAAAPGRARPPAAAPGAPTPQ 777
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 568959093 79 RSSSGRSSSARSASTTSSPTRVYLVRATPVGAVPiRASPARSAPATRATRE 129
Cdd:PHA03378 778 PPPQAPPAPQQRPRGAPTPQPPPQAGPTSMQLMP-RAAPGQQGPTKQILRQ 827
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
4-131 |
5.56e-11 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 65.28 E-value: 5.56e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 4 GSHRNSSPARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASParAPPPQASPARASPARASLARAPPSRSSSG 83
Cdd:PRK12323 367 QSGGGAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAA--ARAVAAAPARRSPAPEALAAARQASARGP 444
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 568959093 84 RSSSARSASTTssptrvylvrATPVGAVPIRASPARSAPATRATRESP 131
Cdd:PRK12323 445 GGAPAPAPAPA----------AAPAAAARPAAAGPRPVAAAAAAAPAR 482
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
3-147 |
4.43e-10 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 62.42 E-value: 4.43e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 3 RGSHRNSSPARTPPQASPARTSPARAPPqasPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPPSRSSS 82
Cdd:PRK14951 367 AAAAEAAAPAEKKTPARPEAAAPAAAPV---AQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPA 443
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 568959093 83 GRSSSARSASTTSSPTRVYLVRATPVGAVPIRASPARSAPA-TRATRESPGLsfpkfSWQETQRQL 147
Cdd:PRK14951 444 AVALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAaARLTPTEEGD-----VWHATVQQL 504
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
12-136 |
4.78e-10 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 62.39 E-value: 4.78e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 12 ARTPPQASPARTSPARA------PPQASPART-PPQASPTRT-PPQASPARAPPPQASPARASPARAslARAPPSRSSSG 83
Cdd:PHA03378 713 RAQRPAAATGRARPPAAapgrarPPAAAPGRArPPAAAPGRArPPAAAPGRARPPAAAPGAPTPQPP--PQAPPAPQQRP 790
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 568959093 84 RSSSARSASTTSSPTRVYLVRATPVGAVPIRASPARSAPATRATRESPGLSFP 136
Cdd:PHA03378 791 RGAPTPQPPPQAGPTSMQLMPRAAPGQQGPTKQILRQLLTGGVKRGRPSLKKP 843
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
3-151 |
7.60e-10 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 61.82 E-value: 7.60e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 3 RGSHRNSSPARTPPQASPARTSPARAPPQASPARTPPQASPTrTPPQASPARAPPPQAS---------PARASPARASLA 73
Cdd:PRK12323 437 RQASARGPGGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAA-APARAAPAAAPAPADDdpppweelpPEFASPAPAQPD 515
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 74 RAPPSRSSSGRSSSARSASTTSSPTRVylVRATPVGAVPIRASPARSAPATRATRESPGLSfPKF--SWQETQRQLPLIG 151
Cdd:PRK12323 516 AAPAGWVAESIPDPATADPDDAFETLA--PAPAAAPAPRAAAATEPVVAPRPPRASASGLP-DMFdgDWPALAARLPVRG 592
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
9-148 |
1.05e-08 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 58.41 E-value: 1.05e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 9 SSPARTPPQASPARTSPARAPPQASPARTPPQA----SPTRTPPQASPARAPPPQASPARASPARASLARAPPSRSSSGR 84
Cdd:PHA03247 2755 ARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAvaslSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSA 2834
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568959093 85 SSSARSASTTSSPTRVYLVRATPVGAVPIRASPARSAPATRATRESP---GLSFPKFSWQETQRQLP 148
Cdd:PHA03247 2835 QPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPpvrRLARPAVSRSTESFALP 2901
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
7-132 |
2.22e-08 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 57.00 E-value: 2.22e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 7 RNSSPARTPPQASPARTSPARA-PPQASPART-PPQASPTRT-PPQASPARA---PPPQASPA-----RASPARASLARA 75
Cdd:PHA03378 723 RARPPAAAPGRARPPAAAPGRArPPAAAPGRArPPAAAPGRArPPAAAPGAPtpqPPPQAPPApqqrpRGAPTPQPPPQA 802
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 568959093 76 PPSRSSSGRSSSARSASTTSSPTRVYLVRATPVG--AVPIRASPARSAPAtrATRESPG 132
Cdd:PHA03378 803 GPTSMQLMPRAAPGQQGPTKQILRQLLTGGVKRGrpSLKKPAALERQAAA--GPTPSPG 859
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
4-130 |
8.18e-08 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 55.38 E-value: 8.18e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 4 GSHRNSSPARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPPSRSSSG 83
Cdd:PRK07764 389 GGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAP 468
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 568959093 84 RSSSARSASTTSSPTRVYLVRATPVGAVPIRASPARSAPATRATRES 130
Cdd:PRK07764 469 APAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAATLRER 515
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
5-124 |
9.98e-08 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 55.33 E-value: 9.98e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 5 SHRNSSPART-PPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPPSRSSSG 83
Cdd:PHA03247 2727 AARQASPALPaAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPAD 2806
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 568959093 84 RSSSARSASTTSSPTrvylvrATPVGAVPIRASPARSAPAT 124
Cdd:PHA03247 2807 PPAAVLAPAAALPPA------ASPAGPLPPPTSAQPTAPPP 2841
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
3-123 |
1.19e-07 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 54.61 E-value: 1.19e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 3 RGSHRNSSPARTPPQASPARTSPARAPPQASPARTPPQASptRTPPQASPARAPPPQASPARASPARASLARAPPSRSSS 82
Cdd:PRK07764 384 RLGVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAP--APAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAA 461
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 568959093 83 GRSSSARSASTTSSPTRVYLVRATPVGAVPIRASPARSAPA 123
Cdd:PRK07764 462 PSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAA 502
|
|
| PHA02682 |
PHA02682 |
ORF080 virion core protein; Provisional |
10-77 |
1.48e-07 |
|
ORF080 virion core protein; Provisional
Pssm-ID: 177464 [Multi-domain] Cd Length: 280 Bit Score: 52.94 E-value: 1.48e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568959093 10 SP-ARTPPQASPARTSPARAPPQASPARTPPQASPTrTPPQASPArAPPPQASPARASPARA---SLARAPP 77
Cdd:PHA02682 80 SPlAPSPACAAPAPACPACAPAAPAPAVTCPAPAPA-CPPATAPT-CPPPAVCPAPARPAPAcppSTRQCPP 149
|
|
| SR |
smart00202 |
Scavenger receptor Cys-rich; The sea urchin egg peptide speract contains 4 repeats of SR ... |
237-310 |
1.64e-07 |
|
Scavenger receptor Cys-rich; The sea urchin egg peptide speract contains 4 repeats of SR domains that contain 6 conserved cysteines. May bind bacterial antigens in the protein MARCO.
Pssm-ID: 214555 [Multi-domain] Cd Length: 101 Bit Score: 49.65 E-value: 1.64e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 568959093 237 SGEWLPVCSSSWNDTDSKRTCQQLGFDSAYRTTEVAH-RDITSSFLLSEYNTTIQE-SLyrSQCPSRRYVSLQCSH 310
Cdd:smart00202 19 NGQWGTVCDDGWDLRDANVVCRQLGFGGAVSASGSAYfGPGSGPIWLDNVRCSGTEaSL--SDCPHSGWGSHNCSH 92
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
7-124 |
3.75e-07 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 53.07 E-value: 3.75e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 7 RNSSPARTPPQASPARTSPARAPPQASPARTPPQ-ASPTRTPPQASPARAPPPQASPARASPARASLARAPPSRSSSGRS 85
Cdd:PRK07764 383 RRLGVAGGAGAPAAAAPSAAAAAPAAAPAPAAAApAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAP 462
|
90 100 110
....*....|....*....|....*....|....*....
gi 568959093 86 SSARSASTTSSPTRVYLVRATPVGAVPIRASPARSAPAT 124
Cdd:PRK07764 463 SAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPA 501
|
|
| PRK14971 |
PRK14971 |
DNA polymerase III subunit gamma/tau; |
11-77 |
4.28e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 52.86 E-value: 4.28e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568959093 11 PARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPP 77
Cdd:PRK14971 393 SAAAAASPSPSQSSAAAQPSAPQSATQPAGTPPTVSVDPPAAVPVNPPSTAPQAVRPAQFKEEKKIP 459
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
8-77 |
4.44e-07 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 52.97 E-value: 4.44e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 8 NSSPARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPP 77
Cdd:PRK12270 40 STAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPA 109
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
11-136 |
4.50e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 52.93 E-value: 4.50e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 11 PARTPP-QASPARTSPARAP-PQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPPSRSSSGRSSSA 88
Cdd:PRK07003 427 PAAPAPpATADRGDDAADGDaPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAA 506
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 568959093 89 RSASttssptrvylvrATPVGAVPIRASPARSAPATRATRESPGLSFP 136
Cdd:PRK07003 507 VPDA------------RAPAAASREDAPAAAAPPAPEARPPTPAAAAP 542
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
12-131 |
5.01e-07 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 53.02 E-value: 5.01e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 12 ARTPPQASPAR--TSPARAPPQASPARTP-PQASPTRTPPQASPARAPPPQASPARASPARASLARAPPSRSSSGRSSSA 88
Cdd:PHA03247 2655 DPAPGRVSRPRraRRLGRAAQASSPPQRPrRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPA 2734
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 568959093 89 RSASTTSSPTRVylVRATPVGAVPIRASPARSAPATRATRESP 131
Cdd:PHA03247 2735 LPAAPAPPAVPA--GPATPGGPARPARPPTTAGPPAPAPPAAP 2775
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
29-136 |
7.20e-07 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 52.02 E-value: 7.20e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 29 PPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPPSRSSSGRSSSARSASTTSSPTRVylVRATPV 108
Cdd:PRK14951 366 PAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAA--PAAAPA 443
|
90 100 110
....*....|....*....|....*....|
gi 568959093 109 GAVPIRASPARSAPATRAT--RESPGLSFP 136
Cdd:PRK14951 444 AVALAPAPPAQAAPETVAIpvRVAPEPAVA 473
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
4-140 |
1.21e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 51.86 E-value: 1.21e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 4 GSHRNSSPARTPPQASPARTSP-----ARAPPQASP---ARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARA 75
Cdd:PHA03247 2860 GDVRRRPPSRSPAAKPAAPARPpvrrlARPAVSRSTesfALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRP 2939
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568959093 76 PPSRSSSGRSSSARSASTTSS--------PTRVYLVRATPVGAVPIRASPARSAPaTRATRESPGLSfpkfSW 140
Cdd:PHA03247 2940 QPPLAPTTDPAGAGEPSGAVPqpwlgalvPGRVAVPRFRVPQPAPSREAPASSTP-PLTGHSLSRVS----SW 3007
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
16-77 |
1.90e-06 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 51.04 E-value: 1.90e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568959093 16 PQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPP 77
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAP 99
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
4-131 |
2.71e-06 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 50.37 E-value: 2.71e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 4 GSHRNSSPARTPPQASPARTSPAraPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPPSRSSSG 83
Cdd:PRK07764 654 PKHVAVPDASDGGDGWPAKAGGA--APAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAP 731
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 568959093 84 RSSSARSASTTSSPTRVYLVRATPVGAVPIRASPARSAPATRATRESP 131
Cdd:PRK07764 732 SPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPP 779
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
17-131 |
2.83e-06 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 50.37 E-value: 2.83e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 17 QASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPPSRSSSGRSSSARSASTTSS 96
Cdd:PRK07764 386 GVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQ 465
|
90 100 110
....*....|....*....|....*....|....*
gi 568959093 97 PTrvylvrATPVGAVPIRASPARSAPATRATRESP 131
Cdd:PRK07764 466 PA------PAPAAAPEPTAAPAPAPPAAPAPAAAP 494
|
|
| PRK14965 |
PRK14965 |
DNA polymerase III subunits gamma and tau; Provisional |
10-77 |
4.35e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237871 [Multi-domain] Cd Length: 576 Bit Score: 49.35 E-value: 4.35e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568959093 10 SPARTPPQASPARTSPARAPPQASpARTPPQASPTRtPPQASPARAPPPqaSPARASPARASLARAPP 77
Cdd:PRK14965 381 APAPPSAAWGAPTPAAPAAPPPAA-APPVPPAAPAR-PAAARPAPAPAP--PAAAAPPARSADPAAAA 444
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
3-136 |
7.74e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 49.17 E-value: 7.74e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 3 RGSHRNSSPARTP-PQASPARTSPARAPPQASP----ARTPPQ-ASPTRTPPQASPARAPPPQASPARASPARASLARAP 76
Cdd:PHA03247 2662 SRPRRARRLGRAAqASSPPQRPRRRAARPTVGSltslADPPPPpPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAP 2741
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 568959093 77 PSRSSSGRS----SSARSASTTSSPTRVYLVRAtPVGAVPIRASPARSAPATRATRESPGLSFP 136
Cdd:PHA03247 2742 PAVPAGPATpggpARPARPPTTAGPPAPAPPAA-PAAGPPRRLTRPAVASLSESRESLPSPWDP 2804
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
8-148 |
9.25e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 48.65 E-value: 9.25e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 8 NSSPARTPPQASPARTSPARapPQASPArTPPQASPTRTPPQASPARAPPPQASPArASPARASLARAPPSRSSSGRSss 87
Cdd:PRK14950 361 VPVPAPQPAKPTAAAPSPVR--PTPAPS-TRPKAAAAANIPPKEPVRETATPPPVP-PRPVAPPVPHTPESAPKLTRA-- 434
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568959093 88 arsasttssptrvylvrATPVGAVPIRASPARSAPATRATRESPG-LSFPKFSWQETQRQLP 148
Cdd:PRK14950 435 -----------------AIPVDEKPKYTPPAPPKEEEKALIADGDvLEQLEAIWKQILRDVP 479
|
|
| PHA02682 |
PHA02682 |
ORF080 virion core protein; Provisional |
7-77 |
9.67e-06 |
|
ORF080 virion core protein; Provisional
Pssm-ID: 177464 [Multi-domain] Cd Length: 280 Bit Score: 47.55 E-value: 9.67e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568959093 7 RNSSPARTPPQASPARTSPARAPPqasparTPPQASPTRTPPQASPARAPPPQASParasPARASLARAPP 77
Cdd:PHA02682 92 APACPACAPAAPAPAVTCPAPAPA------CPPATAPTCPPPAVCPAPARPAPACP----PSTRQCPPAPP 152
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
2-77 |
1.12e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 48.78 E-value: 1.12e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568959093 2 DRGSHRNSSPARTPPQASPARTSPARAPpqASPARTPPQASPTRTPPQASPARAP-PPQASPAR--ASPARASLARAPP 77
Cdd:PHA03247 2604 DRGDPRGPAPPSPLPPDTHAPDPPPPSP--SPAANEPDPHPPPTVPPPERPRDDPaPGRVSRPRraRRLGRAAQASSPP 2680
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
4-131 |
1.15e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 48.31 E-value: 1.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 4 GSHRNSSPARTPPQASPARTSPARAppQASPARTPPQASPTR--TPPQASPARAPPPQASPARASPARASLARAPPSRSS 81
Cdd:PRK07003 369 GGGVPARVAGAVPAPGARAAAAVGA--SAVPAVTAVTGAAGAalAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGD 446
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 568959093 82 SGRSSSARSASTTssPTRVYLVRATPVGAVPIRASPARSAPATRATRESP 131
Cdd:PRK07003 447 APVPAKANARASA--DSRCDERDAQPPADSGSASAPASDAPPDAAFEPAP 494
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
1-132 |
1.34e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 48.06 E-value: 1.34e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 1 MDRGSHRNSSPARTPPQASPARTSPARAPPQASPARTPPQASP-TRTPPQASPARAPPPQASPARASPARASLARAPPSR 79
Cdd:PRK07764 663 SDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPaATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLP 742
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 568959093 80 SSSGRSSSARSASTTSSPTRVyLVRATPVGAVPIRASPARSAPATRATRESPG 132
Cdd:PRK07764 743 PEPDDPPDPAGAPAQPPPPPA-PAPAAAPAAAPPPSPPSEEEEMAEDDAPSMD 794
|
|
| SRCR |
pfam00530 |
Scavenger receptor cysteine-rich domain; These domains are disulphide rich extracellular ... |
238-310 |
1.59e-05 |
|
Scavenger receptor cysteine-rich domain; These domains are disulphide rich extracellular domains. These domains are found in several extracellular receptors and may be involved in protein-protein interactions.
Pssm-ID: 459844 Cd Length: 98 Bit Score: 43.90 E-value: 1.59e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568959093 238 GEWLPVCSSSWNDTDSKRTCQQLGFDSA---YRTTEVAHRDITSSFLLSEYNTTIQE-SLyrSQCPSRRYVSLQCSH 310
Cdd:pfam00530 15 GSWGTVCDDGWDLRDAHVVCRQLGCGGAvsaPSGCSYFGPGSTGPIWLDDVRCSGNEtSL--WQCPHRPWGNHNCSH 89
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
10-136 |
1.72e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 47.92 E-value: 1.72e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 10 SPARTPPQASPARTSPARAPPQASPAR--TPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPPSRSSSGRSSS 87
Cdd:PRK07003 382 APGARAAAAVGASAVPAVTAVTGAAGAalAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADS 461
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 568959093 88 ARSASTTSSPTRVyLVRATPVGAVPiraSPARSAPATRATRESPGLSFP 136
Cdd:PRK07003 462 RCDERDAQPPADS-GSASAPASDAP---PDAAFEPAPRAAAPSAATPAA 506
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
11-132 |
2.17e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 47.63 E-value: 2.17e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 11 PARTPPQASPARTSPARAPPQASP--------AR-----TPPQASPTRTP------PQASPARAPPPQASPARASPARAS 71
Cdd:PHA03247 2552 PPPLPPAAPPAAPDRSVPPPRPAPrpsepavtSRarrpdAPPQSARPRAPvddrgdPRGPAPPSPLPPDTHAPDPPPPSP 2631
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568959093 72 LARA-PPSRSSSGRSSSARSASTTSSPTRVYLVRATPVGAVPIRASPARSAPATRATRESPG 132
Cdd:PHA03247 2632 SPAAnEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVG 2693
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
9-77 |
2.52e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 47.17 E-value: 2.52e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568959093 9 SSPARTPPQASPARTSPARAP---PQASPARTPPQASPTRTPPQASPARAPPPQASPA---RASPARASLARAPP 77
Cdd:PRK07994 387 PTAAVAPPQAPAVPPPPASAPqqaPAVPLPETTSQLLAARQQLQRAQGATKAKKSEPAaasRARPVNSALERLAS 461
|
|
| SPATA3 |
pfam15662 |
Spermatogenesis-associated protein 3 family; The SPATA3 family of proteins is expressed ... |
8-77 |
3.22e-05 |
|
Spermatogenesis-associated protein 3 family; The SPATA3 family of proteins is expressed significantly in testis and faintly in epididymis in the ten tissues of testis, ovary, spleen, kidney, lung, heart, brain, epididymis, liver and skeletal muscle in mouse. Members are not expressed in the eight other tissues. This suggests that SPATA3 plays potential roles in spermatogenesis cell apoptosis or spermatogenesis.
Pssm-ID: 434837 [Multi-domain] Cd Length: 190 Bit Score: 44.96 E-value: 3.22e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568959093 8 NSSPARTPPQASPARTSPARAPPQASPArTPPQASPTRTPPQASPARAPPPQASPARAS--PARASLARAPP 77
Cdd:pfam15662 25 ESTPQQPSSESAPQQPSPESTPQQPSPS-TTPQPSSESTPQQPASQALPAPEIRHSSRCllPPDPNTKAAPP 95
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
9-99 |
4.04e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 46.86 E-value: 4.04e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 9 SSPARTPPQASPARTSPARAPPQASP-ARTP------------PQASPTRTPPQAsPARAPPPQASPARASPARASLARA 75
Cdd:PHA03247 369 SAGRHHPKRASLPTRKRRSARHAATPfARGPggddqtrpaapvPASVPTPAPTPV-PASAPPPPATPLPSAEPGSDDGPA 447
|
90 100
....*....|....*....|....
gi 568959093 76 PPSRSSSGRSSSARSASTTSSPTR 99
Cdd:PHA03247 448 PPPERQPPAPATEPAPDDPDDATR 471
|
|
| PLN02983 |
PLN02983 |
biotin carboxyl carrier protein of acetyl-CoA carboxylase |
10-62 |
4.33e-05 |
|
biotin carboxyl carrier protein of acetyl-CoA carboxylase
Pssm-ID: 215533 [Multi-domain] Cd Length: 274 Bit Score: 45.60 E-value: 4.33e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 568959093 10 SPARTPPQASPARTSPArAPPQASPARTPPQASPTRTPPQASPARAP----PPQASP 62
Cdd:PLN02983 148 APVVMMQPPPPHAMPPA-SPPAAQPAPSAPASSPPPTPASPPPAKAPksshPPLKSP 203
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
2-77 |
5.34e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 45.86 E-value: 5.34e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568959093 2 DRGSHRNSSPARTPPQASPARTSPAR--APPQASPARTPPQASPTRTPPQASPARAPP-PQASPARASPARASLARAPP 77
Cdd:PRK14951 400 APAPAAAPAAAASAPAAPPAAAPPAPvaAPAAAAPAAAPAAAPAAVALAPAPPAQAAPeTVAIPVRVAPEPAVASAAPA 478
|
|
| flhF |
PRK06995 |
flagellar biosynthesis protein FlhF; |
8-148 |
5.38e-05 |
|
flagellar biosynthesis protein FlhF;
Pssm-ID: 235904 [Multi-domain] Cd Length: 484 Bit Score: 45.73 E-value: 5.38e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 8 NSSPARTPPQASPARTSPARAPPQaspARTPPQASPTRtpPQASPARAPPPQASPARASPARASLARAPPSRSSSGRSSS 87
Cdd:PRK06995 73 VSRPAAPAAEPAPWLVEHAKRLTA---QREQLVARAAA--PAAPEAQAPAAPAERAAAENAARRLARAAAAAPRPRVPAD 147
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568959093 88 ARSASTTSSPTRVYLVRATPVGAvPIRasparsapATRATRESpglSFPKFSWQETQRQLP 148
Cdd:PRK06995 148 AAAAVADAVKARIERIVNDTVMQ-ELR--------SLRGMLEE---QLASLAWGERQRRDP 196
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
9-131 |
5.43e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 46.01 E-value: 5.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 9 SSPARTPPQASPARTSPARAPPQASPArtPPQASPTRTPPQASPAraPPPQASPARASPARASLARAPPSRSSSGRSSSA 88
Cdd:PRK07994 370 VPPQSAAPAASAQATAAPTAAVAPPQA--PAVPPPPASAPQQAPA--VPLPETTSQLLAARQQLQRAQGATKAKKSEPAA 445
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 568959093 89 RsasttssptrvylVRATPVGAVPIRASPARSAPATRATRESP 131
Cdd:PRK07994 446 A-------------SRARPVNSALERLASVRPAPSALEKAPAK 475
|
|
| PRK10905 |
PRK10905 |
cell division protein DamX; Validated |
3-76 |
8.36e-05 |
|
cell division protein DamX; Validated
Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 44.93 E-value: 8.36e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 3 RGSHRNSSPARTPPQASPARTSPARA-------PPQASPARTP--PQASPTRTPPQASPARAPPPQASPARASPARASLA 73
Cdd:PRK10905 134 RNGNASRQTAKTQTAERPATTRPARKqaviepkKPQATAKTEPkpVAQTPKRTEPAAPVASTKAPAATSTPAPKETATTA 213
|
...
gi 568959093 74 RAP 76
Cdd:PRK10905 214 PVQ 216
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
9-146 |
8.41e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 45.36 E-value: 8.41e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 9 SSPARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPPSRSSSGRSSSA 88
Cdd:PRK07764 595 AGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAG 674
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 568959093 89 RSASTTSSPTRVYLVRATPVGAVPIRASPARSAPATRATRESPGLSFPKFSWQETQRQ 146
Cdd:PRK07764 675 GAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPS 732
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2-132 |
8.50e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 45.55 E-value: 8.50e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 2 DRGSHRNSSPARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPPSRSS 81
Cdd:PHA03307 114 PDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEP 193
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 568959093 82 SGRSSSARSASTTSSPTRVYLVRATPVGAVPIR--ASPARSAPATRATRESPG 132
Cdd:PHA03307 194 PPSTPPAAASPRPPRRSSPISASASSPAPAPGRsaADDAGASSSDSSSSESSG 246
|
|
| PRK14965 |
PRK14965 |
DNA polymerase III subunits gamma and tau; Provisional |
10-75 |
8.78e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237871 [Multi-domain] Cd Length: 576 Bit Score: 45.50 E-value: 8.78e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 568959093 10 SPARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARA 75
Cdd:PRK14965 392 PTPAAPAAPPPAAAPPVPPAAPARPAAARPAPAPAPPAAAAPPARSADPAAAASAGDRWRAFVAFV 457
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2-76 |
8.95e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 45.55 E-value: 8.95e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 2 DRGSHRNSSP--ARTPPQASPARTSPARAPPQ----ASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARA 75
Cdd:PHA03307 291 PRERSPSPSPssPGSGPAPSSPRASSSSSSSResssSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPR 370
|
.
gi 568959093 76 P 76
Cdd:PHA03307 371 P 371
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
3-77 |
1.06e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 45.16 E-value: 1.06e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568959093 3 RGSHRNSSPARTPPQASPArtSPARAPPQASPARTPPQASPTRTPPQASPARAPPpqaSPARASPARASLARAPP 77
Cdd:PHA03307 345 PSPSRSPSPSRPPPPADPS--SPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGR---ARRRDATGRFPAGRPRP 414
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
3-136 |
1.31e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 45.31 E-value: 1.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 3 RGSHRNSSPART--------PPQASPART-----SPARAPPQASPArtPPQASPTRTPPQASPARA--PPPQASPARASP 67
Cdd:PHA03247 2572 RPAPRPSEPAVTsrarrpdaPPQSARPRApvddrGDPRGPAPPSPL--PPDTHAPDPPPPSPSPAAnePDPHPPPTVPPP 2649
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568959093 68 ARASLARAPPSRSSSGRSSSARSASTTSSPTRVYLVRATPVGAVPI----RASPARSAPATRATRESPGLSFP 136
Cdd:PHA03247 2650 ERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLtslaDPPPPPPTPEPAPHALVSATPLP 2722
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
9-130 |
1.42e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 44.78 E-value: 1.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 9 SSPARTPPQASPARTS-----PARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPPSRSSSG 83
Cdd:PHA03307 74 GPGTEAPANESRSTPTwslstLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPP 153
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 568959093 84 RSSSARSASTTSSPTRVYLVRA------------TPVGAVPIRASPARSAPATRATRES 130
Cdd:PHA03307 154 AAGASPAAVASDAASSRQAALPlsspeetarapsSPPAEPPPSTPPAAASPRPPRRSSP 212
|
|
| PRK14971 |
PRK14971 |
DNA polymerase III subunit gamma/tau; |
10-77 |
1.66e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 44.38 E-value: 1.66e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 568959093 10 SPARTPPQ-ASPARTSPArAPPQAS----PARTPPQASPTRTPPQASPARAP---PPQASPARASPARASLARAPP 77
Cdd:PRK14971 370 SGGRGPKQhIKPVFTQPA-AAPQPSaaaaASPSPSQSSAAAQPSAPQSATQPagtPPTVSVDPPAAVPVNPPSTAP 444
|
|
| PRK14965 |
PRK14965 |
DNA polymerase III subunits gamma and tau; Provisional |
1-75 |
1.80e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237871 [Multi-domain] Cd Length: 576 Bit Score: 44.35 E-value: 1.80e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 568959093 1 MDRGSHRNSSPARTPPQ-ASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARA 75
Cdd:PRK14965 377 LERGAPAPPSAAWGAPTpAAPAAPPPAAAPPVPPAAPARPAAARPAPAPAPPAAAAPPARSADPAAAASAGDRWRA 452
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
7-131 |
1.85e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 44.59 E-value: 1.85e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 7 RNSSPARTPPQASPARTSPARAPPQASPArTPPQASPTRTPPQASPARAPPPQASPARASP--ARASLARAPPSRSSSGR 84
Cdd:PRK07764 606 SGPPEEAARPAAPAAPAAPAAPAPAGAAA-APAEASAAPAPGVAAPEHHPKHVAVPDASDGgdGWPAKAGGAAPAAPPPA 684
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 568959093 85 SSSARSASTTSSPTRVYLVRATPVGAVPIRASPARSAPATRATRESP 131
Cdd:PRK07764 685 PAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAP 731
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
19-77 |
2.18e-04 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 44.50 E-value: 2.18e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 568959093 19 SPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPP 77
Cdd:PRK12270 37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAA 95
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
8-77 |
2.22e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 44.07 E-value: 2.22e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568959093 8 NSSPARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPAR-APPPQASPARASPARASLARAPP 77
Cdd:PRK07003 473 DSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREdAPAAAAPPAPEARPPTPAAAAPA 543
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
27-131 |
2.24e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 44.21 E-value: 2.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 27 RAPPQASPARTPPQASPTRTPPQASPArapPPQASPARASPARASLARAPPSRSSSGRSSSARSASTTSSPTRVYLVRAT 106
Cdd:PRK07764 383 RRLGVAGGAGAPAAAAPSAAAAAPAAA---PAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPA 459
|
90 100
....*....|....*....|....*
gi 568959093 107 PVGAVPIRASPARSAPATRATRESP 131
Cdd:PRK07764 460 AAPSAQPAPAPAAAPEPTAAPAPAP 484
|
|
| PLN02983 |
PLN02983 |
biotin carboxyl carrier protein of acetyl-CoA carboxylase |
15-77 |
2.87e-04 |
|
biotin carboxyl carrier protein of acetyl-CoA carboxylase
Pssm-ID: 215533 [Multi-domain] Cd Length: 274 Bit Score: 42.90 E-value: 2.87e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568959093 15 PPQASPARTSPARAPPQASPArTPPQASPtrtppqASPARAPPPQASPARASPARASLARAPP 77
Cdd:PLN02983 144 PPPPAPVVMMQPPPPHAMPPA-SPPAAQP------APSAPASSPPPTPASPPPAKAPKSSHPP 199
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
10-136 |
3.25e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 43.62 E-value: 3.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 10 SPARTPPQAS-PARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPPSRSSSGRSSSA 88
Cdd:PHA03307 164 SDAASSRQAAlPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSE 243
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 568959093 89 RSASTTSSPTRVYLVRATPVGAVPIRASPARS-APATRATRESPGLSFP 136
Cdd:PHA03307 244 SSGCGWGPENECPLPRPAPITLPTRIWEASGWnGPSSRPGPASSSSSPR 292
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
7-131 |
3.96e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 43.77 E-value: 3.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 7 RNSSPARTP-PQASPARTSP----ARAPPQASPARTPPQ----ASPTRTPPQASPARAPPPQASPA-RASPARASLARAP 76
Cdd:PHA03247 2675 QASSPPQRPrRRAARPTVGSltslADPPPPPPTPEPAPHalvsATPLPPGPAAARQASPALPAAPApPAVPAGPATPGGP 2754
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 568959093 77 PSRSSSGRSSSARSASTTSSPTRVYLVRATPVGAVPIRAS----PARSAPATRATRESP 131
Cdd:PHA03247 2755 ARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESreslPSPWDPADPPAAVLA 2813
|
|
| FAP |
pfam07174 |
Fibronectin-attachment protein (FAP); This family contains bacterial fibronectin-attachment ... |
12-77 |
4.07e-04 |
|
Fibronectin-attachment protein (FAP); This family contains bacterial fibronectin-attachment proteins (FAP). Family members are rich in alanine and proline, are approximately 300 long, and seem to be restricted to mycobacteria. These proteins contain a fibronectin-binding motif that allows mycobacteria to bind to fibronectin in the extracellular matrix.
Pssm-ID: 429334 Cd Length: 301 Bit Score: 42.61 E-value: 4.07e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568959093 12 ARTPPQASPARTSPARAPPQASPARTPPqASPTRTPPQASP--ARAPPPQASPARASPARASLARAPP 77
Cdd:pfam07174 37 AHADPEPAPPPPSTATAPPAPPPPPPAP-AAPAPPPPPAAPnaPNAPPPPADPNAPPPPPADPNAPPP 103
|
|
| PRK06975 |
PRK06975 |
bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase; Reviewed |
11-68 |
4.45e-04 |
|
bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase; Reviewed
Pssm-ID: 235899 [Multi-domain] Cd Length: 656 Bit Score: 43.17 E-value: 4.45e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 568959093 11 PARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPA 68
Cdd:PRK06975 268 AAAQPATAAPAPSRMTDTNDSKSVTSQPAAAAAAPAPPPNPPATPPEPPARRGRGSAA 325
|
|
| PBP1 |
COG5180 |
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification]; ... |
2-139 |
4.48e-04 |
|
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification];
Pssm-ID: 444064 [Multi-domain] Cd Length: 548 Bit Score: 43.13 E-value: 4.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 2 DRGSHR----NSSPARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAP--PPQASPARASPARASLARA 75
Cdd:COG5180 325 DPGTPRpgqpTERPAGVPEAASDAGQPPSAYPPAEEAVPGKPLEQGAPRPGSSGGDGAPfqPPNGAPQPGLGRRGAPGPP 404
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568959093 76 PPSRSSSGRSSSARSASTTSSPT-RVYLVRATPVGAVPIRASPaRSAPAtRATRESPGLSFPKFS 139
Cdd:COG5180 405 MGAGDLVQAALDGGGRETASLGGaAGGAGQGPKADFVPGDAES-VSGPA-GLADQAGAAASTAMA 467
|
|
| PHA03377 |
PHA03377 |
EBNA-3C; Provisional |
14-146 |
4.49e-04 |
|
EBNA-3C; Provisional
Pssm-ID: 177614 [Multi-domain] Cd Length: 1000 Bit Score: 43.12 E-value: 4.49e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 14 TPPQASPARtspaRAPPQASPartPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPPSRSSSGRSSSARSAST 93
Cdd:PHA03377 551 TPPKVSPSD----RGPPKASP---PVMAPPSTGPRVMATPSTGPRDMAPPSTGPRQQAKCKDGPPASGPHEKQPPSSAPR 623
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 568959093 94 TSSPTRVYLVRATPVGAVPIRASPaRSAPATRATRESPGLSFPKFSWQETQRQ 146
Cdd:PHA03377 624 DMAPSVVRMFLRERLLEQSTGPKP-KSFWEMRAGRDGSGIQQEPSSRRQPATQ 675
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
14-77 |
4.73e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 43.03 E-value: 4.73e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 568959093 14 TPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPP 77
Cdd:PRK14948 514 SGSASNTAKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPP 577
|
|
| PHA03269 |
PHA03269 |
envelope glycoprotein C; Provisional |
7-154 |
5.68e-04 |
|
envelope glycoprotein C; Provisional
Pssm-ID: 165527 [Multi-domain] Cd Length: 566 Bit Score: 42.79 E-value: 5.68e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 7 RNSSPARTPPQASPARTSPARAPPQASPARTPPQASPTrtpPQASpaRAPPPQASPARASPARASLARAPPSRSSSgrss 86
Cdd:PHA03269 38 QKPDPAPAPHQAASRAPDPAVAPTSAASRKPDLAQAPT---PAAS--EKFDPAPAPHQAASRAPDPAVAPQLAAAP---- 108
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568959093 87 sarsasttssptrvylvraTPVGAVPIRASP-ARSAPATRATRESPGLSFPKFSWQETQ------RQLPLIGCVI 154
Cdd:PHA03269 109 -------------------KPDAAEAFTSAAqAHEAPADAGTSAASKKPDPAAHTQHSPppfaytRSMEHIACTH 164
|
|
| PLN02983 |
PLN02983 |
biotin carboxyl carrier protein of acetyl-CoA carboxylase |
9-62 |
5.91e-04 |
|
biotin carboxyl carrier protein of acetyl-CoA carboxylase
Pssm-ID: 215533 [Multi-domain] Cd Length: 274 Bit Score: 42.13 E-value: 5.91e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 568959093 9 SSPARTPPqASPARTSPARAPPQASPARTPPQASPTRT-----PPQASPA-----RAPPPQASP 62
Cdd:PLN02983 156 PPPHAMPP-ASPPAAQPAPSAPASSPPPTPASPPPAKApksshPPLKSPMagtfyRSPAPGEPP 218
|
|
| PHA03377 |
PHA03377 |
EBNA-3C; Provisional |
2-67 |
6.16e-04 |
|
EBNA-3C; Provisional
Pssm-ID: 177614 [Multi-domain] Cd Length: 1000 Bit Score: 42.73 E-value: 6.16e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568959093 2 DRGSHRNSSPARTPPQASP-ARTSPARAPPQASPARTPP--QASPTRTPPQASPARAPPPQASPARASP 67
Cdd:PHA03377 559 DRGPPKASPPVMAPPSTGPrVMATPSTGPRDMAPPSTGPrqQAKCKDGPPASGPHEKQPPSSAPRDMAP 627
|
|
| PRK11855 |
PRK11855 |
dihydrolipoamide acetyltransferase; Reviewed |
14-74 |
6.28e-04 |
|
dihydrolipoamide acetyltransferase; Reviewed
Pssm-ID: 237000 [Multi-domain] Cd Length: 547 Bit Score: 42.50 E-value: 6.28e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568959093 14 TPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLAR 74
Cdd:PRK11855 194 VAAAAPAAAAAPAAAAPAAAAAAAPAPAPAAAAAPAAAAPAAAAAPGKAPHASPAVRRLAR 254
|
|
| PRK12757 |
PRK12757 |
cell division protein FtsN; Provisional |
7-73 |
6.78e-04 |
|
cell division protein FtsN; Provisional
Pssm-ID: 237191 [Multi-domain] Cd Length: 256 Bit Score: 41.57 E-value: 6.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 7 RNSSPARTPPQASPARTSPARAPPQASPARTPPQASPTRTP---PQASPARAPPPQASPARAS-------------PA-- 68
Cdd:PRK12757 121 IQQQAQQQQPPATTAQPQPVTPPRQTTAPVQPQTPAPVRTQpaaPVTQAVEAPKVEAEKEKEQrwmvqcgsfkgteQAes 200
|
....*.
gi 568959093 69 -RASLA 73
Cdd:PRK12757 201 vRAQLA 206
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2-75 |
6.95e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 42.85 E-value: 6.95e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 568959093 2 DRGSHRNSSPARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARA 75
Cdd:PHA03307 317 SSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRA 390
|
|
| PHA03269 |
PHA03269 |
envelope glycoprotein C; Provisional |
5-75 |
6.98e-04 |
|
envelope glycoprotein C; Provisional
Pssm-ID: 165527 [Multi-domain] Cd Length: 566 Bit Score: 42.41 E-value: 6.98e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568959093 5 SHRNSSPARTPPQASPARTSPARAP-PQAS----PARTPPQASPTRTPPQASP--ARAPPPQASPARASPARASLARA 75
Cdd:PHA03269 50 ASRAPDPAVAPTSAASRKPDLAQAPtPAASekfdPAPAPHQAASRAPDPAVAPqlAAAPKPDAAEAFTSAAQAHEAPA 127
|
|
| DedD |
COG3147 |
Cell division protein DedD (periplasmic protein involved in septation) [Cell cycle control, ... |
24-77 |
7.38e-04 |
|
Cell division protein DedD (periplasmic protein involved in septation) [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442381 [Multi-domain] Cd Length: 140 Bit Score: 40.14 E-value: 7.38e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 568959093 24 SPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPP 77
Cdd:COG3147 3 EEAAAAPAAAAAPAAPAAAAAPAPAAAAAAAAPKPAAKPAAPKPAAAAAAAPAA 56
|
|
| PRK14965 |
PRK14965 |
DNA polymerase III subunits gamma and tau; Provisional |
21-77 |
7.59e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237871 [Multi-domain] Cd Length: 576 Bit Score: 42.42 E-value: 7.59e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 568959093 21 ARTSPARAPPQASPARTPPQASP--TRTPPQASPARAPPPQASPARASPARAslARAPP 77
Cdd:PRK14965 378 ERGAPAPPSAAWGAPTPAAPAAPppAAAPPVPPAAPARPAAARPAPAPAPPA--AAAPP 434
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
7-136 |
8.24e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 42.62 E-value: 8.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 7 RNSSPARTPPQASPARTSPARA--PPQASPART-PPQASPTRTPPQASPARAPPPQASPARASP----ARASLARAPPSR 79
Cdd:PHA03247 2795 RESLPSPWDPADPPAAVLAPAAalPPAASPAGPlPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPggdvRRRPPSRSPAAK 2874
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 568959093 80 SSSGRSSSARSASTTSSPTRVYLVRATPVGAVPIRASPARSAPATRATRESPGLSFP 136
Cdd:PHA03247 2875 PAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQP 2931
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
13-132 |
8.32e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 42.47 E-value: 8.32e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 13 RTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPPSRSSSGRSSSARSAS 92
Cdd:PHA03307 257 LPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESS 336
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 568959093 93 TTSSPTRVYLV-------RATPVGAVPIRASPARSAPATRATRESPG 132
Cdd:PHA03307 337 RGAAVSPGPSPsrspspsRPPPPADPSSPRKRPRPSRAPSSPAASAG 383
|
|
| PRK12373 |
PRK12373 |
NADH-quinone oxidoreductase subunit E; |
9-76 |
1.06e-03 |
|
NADH-quinone oxidoreductase subunit E;
Pssm-ID: 237082 [Multi-domain] Cd Length: 400 Bit Score: 41.71 E-value: 1.06e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568959093 9 SSPARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPArapPPQASPARASPARASLARAP 76
Cdd:PRK12373 247 ARPKSADAETNAALKTPATAPKAAAKNAKAPEAQPVSGTAAAEPA---PKEAAKAAAAAAKPALEDKP 311
|
|
| PBP1 |
COG5180 |
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification]; ... |
15-131 |
1.28e-03 |
|
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification];
Pssm-ID: 444064 [Multi-domain] Cd Length: 548 Bit Score: 41.59 E-value: 1.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 15 PPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPPSRSSSGRSSSARSASTT 94
Cdd:COG5180 319 PPGGARDPGTPRPGQPTERPAGVPEAASDAGQPPSAYPPAEEAVPGKPLEQGAPRPGSSGGDGAPFQPPNGAPQPGLGRR 398
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 568959093 95 SSPTRVY----LVRATPVGAVPIRASPARsaPATRATRESP 131
Cdd:COG5180 399 GAPGPPMgagdLVQAALDGGGRETASLGG--AAGGAGQGPK 437
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
8-123 |
1.32e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 41.70 E-value: 1.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 8 NSSPARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPPSRSSSGRSSS 87
Cdd:PHA03307 110 GPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSP 189
|
90 100 110
....*....|....*....|....*....|....*.
gi 568959093 88 ARSASTTSSPTRvyLVRATPVGAVPIRASPARSAPA 123
Cdd:PHA03307 190 PAEPPPSTPPAA--ASPRPPRRSSPISASASSPAPA 223
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
10-77 |
1.39e-03 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 41.68 E-value: 1.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 10 SPARTPPQASPARTSPARAP---PQASPARTPPQASP-TRTPPQASPARAPP-----------PQASPARASPARASLAR 74
Cdd:pfam03154 176 AQSGAASPPSPPPPGTTQAAtagPTPSAPSVPPQGSPaTSQPPNQTQSTAAPhtliqqtptlhPQRLPSPHPPLQPMTQP 255
|
...
gi 568959093 75 APP 77
Cdd:pfam03154 256 PPP 258
|
|
| PHA03381 |
PHA03381 |
tegument protein VP22; Provisional |
10-77 |
1.54e-03 |
|
tegument protein VP22; Provisional
Pssm-ID: 177618 [Multi-domain] Cd Length: 290 Bit Score: 40.76 E-value: 1.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 10 SPARTPPQASPARTSPARAPpqASPARTPPQ---ASPTRTPPQASPARAPPPQAsPARASPAR----ASLAR------AP 76
Cdd:PHA03381 103 GPARGARGPAGSRGRGRRAE--SPSPRDPPNpkgASAPRGRKSACADSAALLDA-PAPAAPKRqktpAGLARklhfstAP 179
|
.
gi 568959093 77 P 77
Cdd:PHA03381 180 T 180
|
|
| PRK01297 |
PRK01297 |
ATP-dependent RNA helicase RhlB; Provisional |
10-63 |
1.57e-03 |
|
ATP-dependent RNA helicase RhlB; Provisional
Pssm-ID: 234938 [Multi-domain] Cd Length: 475 Bit Score: 41.05 E-value: 1.57e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 568959093 10 SPARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQAS-PARAPPPQASPA 63
Cdd:PRK01297 18 APAPPSPAAAPAPPPPAKTAAPATKAAAPAAAAPRAEKPKKDkPRRERKPKPASL 72
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
4-137 |
1.63e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 41.31 E-value: 1.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 4 GSHRNSSPARTPPQASPARTSPARAPPQAS-PARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPPSRSSS 82
Cdd:PHA03307 163 ASDAASSRQAALPLSSPEETARAPSSPPAEpPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSS 242
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 568959093 83 GRSSSARSASTTSSPTRVYLVRATPVGAVPIRASPARSAPATRATRESPGLSFPK 137
Cdd:PHA03307 243 ESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPS 297
|
|
| PHA03291 |
PHA03291 |
envelope glycoprotein I; Provisional |
9-77 |
1.74e-03 |
|
envelope glycoprotein I; Provisional
Pssm-ID: 223033 [Multi-domain] Cd Length: 401 Bit Score: 41.09 E-value: 1.74e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568959093 9 SSPARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPP 77
Cdd:PHA03291 206 ATPRPTPRTTASPETTPTPSTTTSPPSTTIPAPSTTIAAPQAGTTPEAEGTPAPPTPGGGEAPPANATP 274
|
|
| PHA03309 |
PHA03309 |
transcriptional regulator ICP4; Provisional |
5-76 |
1.81e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 165564 [Multi-domain] Cd Length: 2033 Bit Score: 41.38 E-value: 1.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 5 SHRNSSPARTPPQASPARTsparAPPQASPARTPPQASPT----------RTPPQASPARAPPPQASPARASPARASLAR 74
Cdd:PHA03309 1820 SSSSSSSSSSSPSSRPSRS----ATPSLSPSPSPPRRAPVdrsrsgrrreRDRPSANPFRWAPRQRSRADHSPDGTAPGD 1895
|
..
gi 568959093 75 AP 76
Cdd:PHA03309 1896 AP 1897
|
|
| PTZ00436 |
PTZ00436 |
60S ribosomal protein L19-like protein; Provisional |
5-136 |
1.82e-03 |
|
60S ribosomal protein L19-like protein; Provisional
Pssm-ID: 185616 [Multi-domain] Cd Length: 357 Bit Score: 40.70 E-value: 1.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 5 SHRNSSPARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQAS--PARAS--PARASlarAPPSRS 80
Cdd:PTZ00436 212 SGKKSAKAAAPAKAAAAPAKAAAPPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAAapPAKAAapPAKAA---APPAKA 288
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 81 SSGRSSSARSASTTSSPTRVYLVRATPVGAVPIR--ASPARSA--PATRATRESPGLSFP 136
Cdd:PTZ00436 289 AAPPAKAAAAPAKAAAAPAKAAAAPAKAAAPPAKaaAPPAKAAtpPAKAAAPPAKAAAAP 348
|
|
| PHA03381 |
PHA03381 |
tegument protein VP22; Provisional |
5-77 |
1.91e-03 |
|
tegument protein VP22; Provisional
Pssm-ID: 177618 [Multi-domain] Cd Length: 290 Bit Score: 40.38 E-value: 1.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 5 SHRNSSPARTPPQAS-------PARTSPARAPPQASPARTPPQASPTRTP------PQASPARAPPPQASP-ARASPARA 70
Cdd:PHA03381 44 ARRGAGQARGRSQAErrfhhydEARADYPYYTGSSSEDERPADPRPSRRPhaqpeaSGPGPARGARGPAGSrGRGRRAES 123
|
....*..
gi 568959093 71 SLARAPP 77
Cdd:PHA03381 124 PSPRDPP 130
|
|
| PRK06549 |
PRK06549 |
acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; Validated |
24-76 |
1.96e-03 |
|
acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; Validated
Pssm-ID: 235826 [Multi-domain] Cd Length: 130 Bit Score: 38.64 E-value: 1.96e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 568959093 24 SPARAPPQASPARTPpqasptrTPPQASPARAPPPQAsPARASPARASLARAP 76
Cdd:PRK06549 23 APAQAAAPAQPASTP-------VPVPTEASPQVEAQA-PQPAAAAGADAMPSP 67
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
23-130 |
2.03e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 41.12 E-value: 2.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 23 TSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARA----SLARAPPSRSSSGRSSSARSASTTSSPT 98
Cdd:PRK07764 590 PAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAeasaAPAPGVAAPEHHPKHVAVPDASDGGDGW 669
|
90 100 110
....*....|....*....|....*....|..
gi 568959093 99 RVYLVRATPVGAVPIRASPARSAPATRATRES 130
Cdd:PRK07764 670 PAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQP 701
|
|
| PRK12495 |
PRK12495 |
hypothetical protein; Provisional |
9-75 |
2.28e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 183558 [Multi-domain] Cd Length: 226 Bit Score: 39.85 E-value: 2.28e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 9 SSPARTPPQASPARTSPARAPPQASPARTPPQASPTRTPP--QASPA-RAPPPQASPARASPARASLARA 75
Cdd:PRK12495 106 AEAADQSAPPEASSTSATDEAATDPPATAAARDGPTPDPTaqPATPDeRRSPRQRPPVSGEPPTPSTPDA 175
|
|
| PRK12757 |
PRK12757 |
cell division protein FtsN; Provisional |
8-63 |
2.30e-03 |
|
cell division protein FtsN; Provisional
Pssm-ID: 237191 [Multi-domain] Cd Length: 256 Bit Score: 40.03 E-value: 2.30e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 568959093 8 NSSPARTPPQASPARTSPA--RAPPQASPARTPPQASPTRTPPQASPARAPPPQASPA 63
Cdd:PRK12757 119 VQIQQQAQQQQPPATTAQPqpVTPPRQTTAPVQPQTPAPVRTQPAAPVTQAVEAPKVE 176
|
|
| SAV_2336_NTERM |
NF041121 |
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ... |
1-76 |
2.37e-03 |
|
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.
Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 40.76 E-value: 2.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 1 MDRGSHRNSSPARTPPQAS--PARTSPARAPPQASPARTPPQASPTRTPPQA--SPARAPPPQASPARASPARASLARAP 76
Cdd:NF041121 15 MGRAAAPPSPEGPAPTAASqpATPPPPAAPPSPPGDPPEPPAPEPAPLPAPYpgSLAPPPPPPPGPAGAAPGAALPVRVP 94
|
|
| PRK10856 |
PRK10856 |
cytoskeleton protein RodZ; |
8-72 |
2.40e-03 |
|
cytoskeleton protein RodZ;
Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 40.39 E-value: 2.40e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568959093 8 NSSPARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASL 72
Cdd:PRK10856 190 QTPAVATAPAPAVDPQQNAVVAPSQANVDTAATPAPAAPATPDGAAPLPTDQAGVSTPAADPNAL 254
|
|
| FimV |
COG3170 |
Type IV pilus assembly protein FimV [Cell motility, Extracellular structures]; |
15-77 |
2.55e-03 |
|
Type IV pilus assembly protein FimV [Cell motility, Extracellular structures];
Pssm-ID: 442403 [Multi-domain] Cd Length: 508 Bit Score: 40.55 E-value: 2.55e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568959093 15 PPQASPARTSPARAPPQASPArtPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPP 77
Cdd:COG3170 106 PPAYAAAAAAPAAAPAPAPAA--PAAAAAAADQPAAEAAPAASGEYYPVRPGDTLWSIAARPV 166
|
|
| PRK06975 |
PRK06975 |
bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase; Reviewed |
17-76 |
2.57e-03 |
|
bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase; Reviewed
Pssm-ID: 235899 [Multi-domain] Cd Length: 656 Bit Score: 40.47 E-value: 2.57e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568959093 17 QASPARTSPARAPP-QASPARTPPQASPTRTPPQASPARAPPP-QASPARASPARASLARAP 76
Cdd:PRK06975 264 TWADAAAQPATAAPaPSRMTDTNDSKSVTSQPAAAAAAPAPPPnPPATPPEPPARRGRGSAA 325
|
|
| PRK01297 |
PRK01297 |
ATP-dependent RNA helicase RhlB; Provisional |
17-69 |
2.85e-03 |
|
ATP-dependent RNA helicase RhlB; Provisional
Pssm-ID: 234938 [Multi-domain] Cd Length: 475 Bit Score: 40.28 E-value: 2.85e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 568959093 17 QASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPAR 69
Cdd:PRK01297 11 KGEAEQPAPAPPSPAAAPAPPPPAKTAAPATKAAAPAAAAPRAEKPKKDKPRR 63
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
12-123 |
2.93e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 40.69 E-value: 2.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 12 ARTPPQASPARTS-PARAPPQASPARTPPQASPTRTP-----PQASPARAPPPQASPAR-ASPAR---ASLARAPPSRSS 81
Cdd:PHA03247 2816 AALPPAASPAGPLpPPTSAQPTAPPPPPGPPPPSLPLggsvaPGGDVRRRPPSRSPAAKpAAPARppvRRLARPAVSRST 2895
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 568959093 82 SGRSSSARSASTTSSPTRVYLVRATPVGAVPIRASPARSAPA 123
Cdd:PHA03247 2896 ESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPP 2937
|
|
| Rib_recp_KP_reg |
pfam05104 |
Ribosome receptor lysine/proline rich region; This highly conserved region is found towards ... |
9-73 |
3.11e-03 |
|
Ribosome receptor lysine/proline rich region; This highly conserved region is found towards the C-terminus of the transmembrane domain. The function is unclear.
Pssm-ID: 461548 [Multi-domain] Cd Length: 140 Bit Score: 38.18 E-value: 3.11e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568959093 9 SSPARTP---PQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLA 73
Cdd:pfam05104 73 PSAALEPepvPTPVPAPVEPEPAPPSESPAPSPKEKKKKEKKSAKVEPAETPEAVQPKPALEKEEPPA 140
|
|
| Metaviral_G |
pfam09595 |
Metaviral_G glycoprotein; This is a viral attachment glycoprotein from region G of metaviruses. ... |
5-77 |
3.12e-03 |
|
Metaviral_G glycoprotein; This is a viral attachment glycoprotein from region G of metaviruses. It is high in serine and threonine suggesting it is highly glycosylated.
Pssm-ID: 462833 [Multi-domain] Cd Length: 183 Bit Score: 39.17 E-value: 3.12e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568959093 5 SHRNSSPART--PPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPP 77
Cdd:pfam09595 90 NNQHPSQDRSeaPPLEPAAKTKPSEHEPANPPDASNRLSPPDASTAAIREARTFRKPSTGKRNNPSSAQSDQSPP 164
|
|
| PRK10905 |
PRK10905 |
cell division protein DamX; Validated |
20-132 |
3.23e-03 |
|
cell division protein DamX; Validated
Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 39.92 E-value: 3.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 20 PARTSPAR---APPQASPARTPPQASPTR----------TPPQASPARAPPPQASPARASPARASLARAPpsrsssgrss 86
Cdd:PRK10905 127 PATVAPVRngnASRQTAKTQTAERPATTRparkqaviepKKPQATAKTEPKPVAQTPKRTEPAAPVASTK---------- 196
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 568959093 87 sarsastTSSPTRVYLVRATPVGAVPIRASPARSAPATRATRESPG 132
Cdd:PRK10905 197 -------APAATSTPAPKETATTAPVQTASPAQTTATPAAGGKTAG 235
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
11-136 |
3.25e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 40.60 E-value: 3.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 11 PARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQA-SPARASPARASLARAPPsRSSSGRSSSAR 89
Cdd:PRK07003 360 PAVTGGGAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAAlAPKAAAAAAATRAEAPP-AAPAPPATADR 438
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 568959093 90 SASTTSSPTRVYLVRATPVGAVPIRASPARSAPATRATRESPGLSFP 136
Cdd:PRK07003 439 GDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAP 485
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
9-74 |
3.41e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 40.37 E-value: 3.41e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 568959093 9 SSPARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLAR 74
Cdd:COG5373 44 ASAPAEPEPEAAAAATAAAPEAAPAPVPEAPAAPPAAAEAPAPAAAAPPAEAEPAAAPAAASSFEE 109
|
|
| motB |
PRK12799 |
flagellar motor protein MotB; Reviewed |
8-130 |
3.46e-03 |
|
flagellar motor protein MotB; Reviewed
Pssm-ID: 183756 [Multi-domain] Cd Length: 421 Bit Score: 40.08 E-value: 3.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 8 NSSPARTPPQASPARTSPARAPpqaSPARTPPqASPTRTPPQASPARAPPPQASPARASPARASLARAPPSRSSSGRSSS 87
Cdd:PRK12799 309 AVTQSSAITPSSAAIPSPAVIP---SSVTTQS-ATTTQASAVALSSAGVLPSDVTLPGTVALPAAEPVNMQPQPMSTTET 384
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 568959093 88 ARSASTTSSPTrvylvRATPVGAVPirASPARSAPATRATRES 130
Cdd:PRK12799 385 QQSSTGNITST-----ANGPTTSLP--AAPASNIPVSPTSRDA 420
|
|
| DUF1986 |
pfam09342 |
Domain of unknown function (DUF1986); This domain is found in serine proteases and is ... |
331-430 |
3.62e-03 |
|
Domain of unknown function (DUF1986); This domain is found in serine proteases and is predicted to contain disulphide bonds.
Pssm-ID: 286432 Cd Length: 116 Bit Score: 37.53 E-value: 3.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 331 WPWQVSLHFGTTHICGGTLIDAQWVLTAAHCFfvtrekllegWKVYAGTSNLHQLPEAASiSQIIINGNYtdEQ----DD 406
Cdd:pfam09342 1 WPWIAKVYLDGNMICSGVLIDASWVIVSGSCL----------RDTNLRHQYISVVLGGAK-TLKSIEGPY--EQivrvDC 67
|
90 100 110
....*....|....*....|....*....|
gi 568959093 407 Y------DIALIRLSKPLTLSAHIHPACLP 430
Cdd:pfam09342 68 RhdipesEISLLHLASPASFSNHVLPTFVP 97
|
|
| PHA03291 |
PHA03291 |
envelope glycoprotein I; Provisional |
3-74 |
3.90e-03 |
|
envelope glycoprotein I; Provisional
Pssm-ID: 223033 [Multi-domain] Cd Length: 401 Bit Score: 39.94 E-value: 3.90e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568959093 3 RGSHRNSSPARTPPQASPARTSPARAPPQASPARTPPQAS----PTRTPPQASPA--RAPPPQASPA-RASPARASLAR 74
Cdd:PHA03291 209 RPTPRTTASPETTPTPSTTTSPPSTTIPAPSTTIAAPQAGttpeAEGTPAPPTPGggEAPPANATPApEASRYELTVTQ 287
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
8-68 |
4.00e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 39.95 E-value: 4.00e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568959093 8 NSSPARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPA 68
Cdd:PRK14948 517 ASNTAKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPP 577
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
11-68 |
4.00e-03 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 39.22 E-value: 4.00e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 568959093 11 PARTPPQASPARTSPARAPPQASPARTPPQASPTRtPPQASPARAPPPQASPARASPA 68
Cdd:PRK11633 87 PATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKP-QQKVEAPPAPKPEPKPVVEEKA 143
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
3-77 |
4.10e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 40.15 E-value: 4.10e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568959093 3 RGSHRNSSPARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARaspaRASLARAPP 77
Cdd:PHA03307 862 GGRARGKNGRRRPRPPEPRARPGAAAPPKAAAAAPPAGAPAPRPRPAPRVKLGPMPPGGPDP----RGGFRRVPP 932
|
|
| PRK12495 |
PRK12495 |
hypothetical protein; Provisional |
12-129 |
4.30e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 183558 [Multi-domain] Cd Length: 226 Bit Score: 39.08 E-value: 4.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 12 ARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQasPARASPARASLARAPPSRSSSGRSSSARSA 91
Cdd:PRK12495 100 AQPAAEAEAADQSAPPEASSTSATDEAATDPPATAAARDGPTPDPTAQ--PATPDERRSPRQRPPVSGEPPTPSTPDAHV 177
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 568959093 92 STTSSPTRVYLVRAtpVGAVPIRAS----PARSAPATRATRE 129
Cdd:PRK12495 178 AGTLQAARESLVET--LARFARRAAatddPRRAREYLEAARE 217
|
|
| PRK14954 |
PRK14954 |
DNA polymerase III subunits gamma and tau; Provisional |
13-76 |
4.74e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 184918 [Multi-domain] Cd Length: 620 Bit Score: 39.93 E-value: 4.74e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568959093 13 RTPPQASPART-SPARAPPQASPARTPPQASP--TRTPPQASPARAPPPQASPARASPARASLARAP 76
Cdd:PRK14954 393 KAPEPDLPQPDrHPGPAKPEAPGARPAELPSPasAPTPEQQPPVARSAPLPPSPQASAPRNVASGKP 459
|
|
| PRK10547 |
PRK10547 |
chemotaxis protein CheA; Provisional |
15-71 |
4.77e-03 |
|
chemotaxis protein CheA; Provisional
Pssm-ID: 236712 [Multi-domain] Cd Length: 670 Bit Score: 39.71 E-value: 4.77e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 568959093 15 PPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARAS 71
Cdd:PRK10547 219 ADQITFETAVAAPQEKAEETTEVVEVSPKISVPPVLKLAAEQAPAGRVEREKTARSS 275
|
|
| half-pint |
TIGR01645 |
poly-U binding splicing factor, half-pint family; The proteins represented by this model ... |
14-68 |
4.83e-03 |
|
poly-U binding splicing factor, half-pint family; The proteins represented by this model contain three RNA recognition motifs (rrm: pfam00076) and have been characterized as poly-pyrimidine tract binding proteins associated with RNA splicing factors. In the case of PUF60 (GP|6176532), in complex with p54, and in the presence of U2AF, facilitates association of U2 snRNP with pre-mRNA.
Pssm-ID: 130706 [Multi-domain] Cd Length: 612 Bit Score: 39.67 E-value: 4.83e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568959093 14 TPPQASPARTSPARAP--PQASPARTPPQ----ASPTRTPPQASPARAPPPQA-SPARASPA 68
Cdd:TIGR01645 344 NKAVVSSAKKEAEEVPplPQAAPAVVKPGpmeiPTPVPPPGLAIPSLVAPPGLvAPTEINPS 405
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
9-136 |
6.02e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 39.58 E-value: 6.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 9 SSPARTPPQASPARTSPARAPPQASPARTPPQASPTRTP-------------PQASPARAPPP-QASPARASPARASLAR 74
Cdd:PRK07764 616 AAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPkhvavpdasdggdGWPAKAGGAAPaAPPPAPAPAAPAAPAG 695
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568959093 75 APPSRSSSgrsssarsasttssptrvylvrATPVGAVPIRASPARSAPATRATRESPGLSFP 136
Cdd:PRK07764 696 AAPAQPAP----------------------APAATPPAGQADDPAAQPPQAAQGASAPSPAA 735
|
|
| PRK14954 |
PRK14954 |
DNA polymerase III subunits gamma and tau; Provisional |
10-77 |
6.08e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 184918 [Multi-domain] Cd Length: 620 Bit Score: 39.54 E-value: 6.08e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568959093 10 SPARTPPQASPARTSPARAPPQASPARTPpqASPTRTPPQA-SPARAPPPQASPARASPA---RASLARAPP 77
Cdd:PRK14954 383 SPAGSPDVKKKAPEPDLPQPDRHPGPAKP--EAPGARPAELpSPASAPTPEQQPPVARSAplpPSPQASAPR 452
|
|
| Mif2_N |
pfam15624 |
Kinetochore CENP-C fungal homolog, Mif2, N-terminal; Mif2_N is a family of fungal proteins ... |
2-57 |
6.29e-03 |
|
Kinetochore CENP-C fungal homolog, Mif2, N-terminal; Mif2_N is a family of fungal proteins homologous to mammalian CENP-C. On depletion of CENP-C proper formation of both centromeres and kinetochores is prevented. The N-terminal of CENP-C is necessary for recruitment of some but not all components of the Mis12 complex of the kinetochore.
Pssm-ID: 434820 Cd Length: 134 Bit Score: 37.30 E-value: 6.29e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 2 DRGSHRNSSPARTPPQA-SPART---SPARappqaspaRTPPQASPTRTPPQASPARAPP 57
Cdd:pfam15624 73 DLLSGRRRSPRLPPPRArSPAKTnlnSPAR--------RNPSLALDQPARPSSSPTRGAS 124
|
|
| PHA03201 |
PHA03201 |
uracil DNA glycosylase; Provisional |
1-70 |
6.35e-03 |
|
uracil DNA glycosylase; Provisional
Pssm-ID: 165468 Cd Length: 318 Bit Score: 39.11 E-value: 6.35e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 1 MDRGSHRNSSPARTPPqaSPARTSPAraPPQASPARTPPqasptrTPPqaSPARAPPPQASPARASPARA 70
Cdd:PHA03201 1 MKRARSRSPSPPRRPS--PPRPTPPR--SPDASPEETPP------SPP--GPGAEPPPGRAAGPAAPRRR 58
|
|
| PTZ00436 |
PTZ00436 |
60S ribosomal protein L19-like protein; Provisional |
2-132 |
6.47e-03 |
|
60S ribosomal protein L19-like protein; Provisional
Pssm-ID: 185616 [Multi-domain] Cd Length: 357 Bit Score: 39.16 E-value: 6.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 2 DRGSHRNSSPARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARA--PPPQAS--PARASPARASLARAPP 77
Cdd:PTZ00436 186 ERARREDAAAAAAAKQKAAAKKAAAPSGKKSAKAAAPAKAAAAPAKAAAPPAKAaaAPAKAAaaPAKAAAPPAKAAAPPA 265
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 568959093 78 SRSSSGRSSSARSASTTSSPTRVYLVRATPVGA-VPIRASPARSAPATRATRESPG 132
Cdd:PTZ00436 266 KAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAApAKAAAAPAKAAAAPAKAAAPPA 321
|
|
| Treacle |
pfam03546 |
Treacher Collins syndrome protein Treacle; |
12-70 |
6.56e-03 |
|
Treacher Collins syndrome protein Treacle;
Pssm-ID: 460967 [Multi-domain] Cd Length: 531 Bit Score: 39.29 E-value: 6.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 12 ARTPPQASPARTSP----ARAPPQASPARTPPQASPTRTPPQASPARAPPPQ------------------ASPARASPAR 69
Cdd:pfam03546 41 AKTPLQAKPSGKTPqvraASAPAKESPRKGAPPVPPGKTGPAAAQAQAGKPEedsessseesdsdgetpaAATLTTSPAQ 120
|
.
gi 568959093 70 A 70
Cdd:pfam03546 121 V 121
|
|
| PRK14959 |
PRK14959 |
DNA polymerase III subunits gamma and tau; Provisional |
9-77 |
6.59e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 184923 [Multi-domain] Cd Length: 624 Bit Score: 39.28 E-value: 6.59e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568959093 9 SSPARTPPQASPARTSPARAPpqaSPaRTPPQASPTRTPPQASPARAPP--PQASPARASPAR-ASLARAPP 77
Cdd:PRK14959 410 PAAGMTPSSAAPATPAPSAAP---SP-RVPWDDAPPAPPRSGIPPRPAPrmPEASPVPGAPDSvASASDAPP 477
|
|
| AvrBs3 |
NF041308 |
type III secretion system effector avirulence protein AvrBs3; |
1-74 |
6.73e-03 |
|
type III secretion system effector avirulence protein AvrBs3;
Pssm-ID: 469205 [Multi-domain] Cd Length: 1179 Bit Score: 39.56 E-value: 6.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 1 MDRGSHRNSSPARTP----------PQASPARTSPARAPPQASPARtpPQASPTRTPPqasparapPPQASPARASPARA 70
Cdd:NF041308 1 MEPIRSRTPSPAREPqagsqpdgvqPIAGRLVSTAASSPLDGLPAR--PAMSRTRQPA--------TPAPSPAFSVGSFS 70
|
....
gi 568959093 71 SLAR 74
Cdd:NF041308 71 DLLR 74
|
|
| PHA03381 |
PHA03381 |
tegument protein VP22; Provisional |
6-76 |
7.45e-03 |
|
tegument protein VP22; Provisional
Pssm-ID: 177618 [Multi-domain] Cd Length: 290 Bit Score: 38.45 E-value: 7.45e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568959093 6 HRNSSPARTP-PQASPARTSPARAPPQASPARTPPQASPT---RTPPQ---ASPARAPPPqASPARASPARASLARAP 76
Cdd:PHA03381 84 PADPRPSRRPhAQPEASGPGPARGARGPAGSRGRGRRAESpspRDPPNpkgASAPRGRKS-ACADSAALLDAPAPAAP 160
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
17-77 |
7.63e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 39.21 E-value: 7.63e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568959093 17 QASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARAslARAPP 77
Cdd:COG5373 39 EAAEAASAPAEPEPEAAAAATAAAPEAAPAPVPEAPAAPPAAAEAPAPAAAAPP--AEAEP 97
|
|
| PRK11901 |
PRK11901 |
hypothetical protein; Reviewed |
11-77 |
7.84e-03 |
|
hypothetical protein; Reviewed
Pssm-ID: 237015 [Multi-domain] Cd Length: 327 Bit Score: 38.51 E-value: 7.84e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568959093 11 PARTPPQASPARTSPARAPPQAS--PARTPPQASPTRTPPQAspaRAPPPQASPARASPARASLARAPP 77
Cdd:PRK11901 178 PATVAPSKGAKVPATAETHPTPPqkPATKKPAVNHHKTATVA---VPPATSGKPKSGAASARALSSAPA 243
|
|
| Treacle |
pfam03546 |
Treacher Collins syndrome protein Treacle; |
19-75 |
8.21e-03 |
|
Treacher Collins syndrome protein Treacle;
Pssm-ID: 460967 [Multi-domain] Cd Length: 531 Bit Score: 38.90 E-value: 8.21e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 568959093 19 SPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPqASPARASPArASLARA 75
Cdd:pfam03546 34 SEEETPAAKTPLQAKPSGKTPQVRAASAPAKESPRKGAPP-VPPGKTGPA-AAQAQA 88
|
|
| SAV_2336_NTERM |
NF041121 |
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ... |
7-75 |
8.38e-03 |
|
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.
Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 38.83 E-value: 8.38e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568959093 7 RNSSPAR-TPPQASPARTSPARAPPQASPARTP---PQASPTRTPPQASPARAPPPQASPARAsPARASLARA 75
Cdd:NF041121 31 AASQPATpPPPAAPPSPPGDPPEPPAPEPAPLPapyPGSLAPPPPPPPGPAGAAPGAALPVRV-PAPPALPNP 102
|
|
| PRK12757 |
PRK12757 |
cell division protein FtsN; Provisional |
13-77 |
8.41e-03 |
|
cell division protein FtsN; Provisional
Pssm-ID: 237191 [Multi-domain] Cd Length: 256 Bit Score: 38.10 E-value: 8.41e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568959093 13 RTPPQASPARTSPARAPPQASPARTPPQAspTRTPPQASPARAPPPQASPARASPArASLARAPP 77
Cdd:PRK12757 110 QTPQVPRSTVQIQQQAQQQQPPATTAQPQ--PVTPPRQTTAPVQPQTPAPVRTQPA-APVTQAVE 171
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
8-142 |
9.00e-03 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 38.59 E-value: 9.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 8 NSSPARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPPSRSSSGRSSS 87
Cdd:NF040712 202 VPRLAREPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGPGAAPAAEPDEATRDAGEPP 281
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 568959093 88 ARSASTTSSPTRVYLVRATPVG--AVPIRASPARSA--PATRATRESPGLSFPkfSWQE 142
Cdd:NF040712 282 APGAAETPEAAEPPAPAPAAPAapAAPEAEEPARPEppPAPKPKRRRRRASVP--SWDD 338
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
9-136 |
9.19e-03 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 38.79 E-value: 9.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 9 SSPARTPPQASP---ARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPPSRSSSGRS 85
Cdd:pfam17823 112 SRALAAAASSSPssaAQSLPAAIAALPSEAFSAPRAAACRANASAAPRAAIAAASAPHAASPAPRTAASSTTAASSTTAA 191
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 568959093 86 SSARSASTTSSPTRVYLVRATPVGAV--------PIRASPARSAPATRATRESPGLSFP 136
Cdd:pfam17823 192 SSAPTTAASSAPATLTPARGISTAATatghpaagTALAAVGNSSPAAGTVTAAVGTVTP 250
|
|
| FimV |
COG3170 |
Type IV pilus assembly protein FimV [Cell motility, Extracellular structures]; |
10-76 |
9.55e-03 |
|
Type IV pilus assembly protein FimV [Cell motility, Extracellular structures];
Pssm-ID: 442403 [Multi-domain] Cd Length: 508 Bit Score: 38.62 E-value: 9.55e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568959093 10 SPARTPPQASPARTSPA------RAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAP 76
Cdd:COG3170 201 AVLRVPAAEEVAALSPAearqevQAQSADWAAYRARLAAAVEPAPAAAAPAAPPAAAAAAGPVPAAAEDTLSP 273
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2-136 |
9.63e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 39.00 E-value: 9.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959093 2 DRGSHRNSSPARTPPQAS-----PARTSPAR-APPQASPARTPPQASPTRTPPQASPARAPPPQASParaSPARASLARA 75
Cdd:PHA03307 779 EPQRGAGSSPPVRAEAAFrrpgrLRRSGPAAdAASRTASKRKSRSHTPDGGSESSGPARPPGAAARP---PPARSSESSK 855
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568959093 76 PPSRSSSGRSSSARSASTTSSPTRvylvRATPVGAVPIRASPARSAPATRATRESPGLSFP 136
Cdd:PHA03307 856 SKPAAAGGRARGKNGRRRPRPPEP----RARPGAAAPPKAAAAAPPAGAPAPRPRPAPRVK 912
|
|
| Pro-rich |
pfam15240 |
Proline-rich protein; This family includes several eukaryotic proline-rich proteins. |
8-77 |
9.82e-03 |
|
Proline-rich protein; This family includes several eukaryotic proline-rich proteins.
Pssm-ID: 464580 [Multi-domain] Cd Length: 167 Bit Score: 37.32 E-value: 9.82e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568959093 8 NSSPARTPPQASPArtsparaPPQASPARTPPQASP-TRTPPQASPARAPPPQASPARASPARASLARAPP 77
Cdd:pfam15240 82 KQKPQGPPPQGGPR-------PPPGKPQGPPPQGGNqQQGPPPPGKPQGPPPQGGGPPPQGGNQQGPPPPP 145
|
|
| |
