homeobox-containing protein 1 isoform X1 [Mus musculus]
HTH_XRE and homeodomain domain-containing protein( domain architecture ID 11153336)
HTH_XRE and homeodomain domain-containing protein
List of domain hits
Name | Accession | Description | Interval | E-value | ||||
HNF-1_N | pfam04814 | Hepatocyte nuclear factor 1 (HNF-1), N-terminus; This family consists of the N-terminus of ... |
25-227 | 6.64e-58 | ||||
Hepatocyte nuclear factor 1 (HNF-1), N-terminus; This family consists of the N-terminus of homeobox-containing transcription factor HNF-1. This region contains a dimerization sequence and an acidic region that may be involved in transcription activation. Mutations and the common Ala/Val 98 polymorphism in HNF-1 cause the type 3 form of maturity-onset diabetes of the young (MODY3). : Pssm-ID: 428137 Cd Length: 178 Bit Score: 188.10 E-value: 6.64e-58
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homeodomain | cd00086 | Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic ... |
268-340 | 2.44e-10 | ||||
Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner. : Pssm-ID: 238039 Cd Length: 59 Bit Score: 55.71 E-value: 2.44e-10
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Name | Accession | Description | Interval | E-value | ||||
HNF-1_N | pfam04814 | Hepatocyte nuclear factor 1 (HNF-1), N-terminus; This family consists of the N-terminus of ... |
25-227 | 6.64e-58 | ||||
Hepatocyte nuclear factor 1 (HNF-1), N-terminus; This family consists of the N-terminus of homeobox-containing transcription factor HNF-1. This region contains a dimerization sequence and an acidic region that may be involved in transcription activation. Mutations and the common Ala/Val 98 polymorphism in HNF-1 cause the type 3 form of maturity-onset diabetes of the young (MODY3). Pssm-ID: 428137 Cd Length: 178 Bit Score: 188.10 E-value: 6.64e-58
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homeodomain | cd00086 | Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic ... |
268-340 | 2.44e-10 | ||||
Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner. Pssm-ID: 238039 Cd Length: 59 Bit Score: 55.71 E-value: 2.44e-10
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HOX | smart00389 | Homeodomain; DNA-binding factors that are involved in the transcriptional regulation of key ... |
267-338 | 1.34e-08 | ||||
Homeodomain; DNA-binding factors that are involved in the transcriptional regulation of key developmental processes Pssm-ID: 197696 [Multi-domain] Cd Length: 57 Bit Score: 50.71 E-value: 1.34e-08
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Homeobox | pfam00046 | Homeobox domain; |
271-334 | 5.37e-08 | ||||
Homeobox domain; Pssm-ID: 425441 Cd Length: 54 Bit Score: 49.04 E-value: 5.37e-08
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HTH_XRE | cd00093 | Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the ... |
175-205 | 7.88e-03 | ||||
Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators. Pssm-ID: 238045 [Multi-domain] Cd Length: 58 Bit Score: 34.45 E-value: 7.88e-03
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Name | Accession | Description | Interval | E-value | ||||
HNF-1_N | pfam04814 | Hepatocyte nuclear factor 1 (HNF-1), N-terminus; This family consists of the N-terminus of ... |
25-227 | 6.64e-58 | ||||
Hepatocyte nuclear factor 1 (HNF-1), N-terminus; This family consists of the N-terminus of homeobox-containing transcription factor HNF-1. This region contains a dimerization sequence and an acidic region that may be involved in transcription activation. Mutations and the common Ala/Val 98 polymorphism in HNF-1 cause the type 3 form of maturity-onset diabetes of the young (MODY3). Pssm-ID: 428137 Cd Length: 178 Bit Score: 188.10 E-value: 6.64e-58
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homeodomain | cd00086 | Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic ... |
268-340 | 2.44e-10 | ||||
Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner. Pssm-ID: 238039 Cd Length: 59 Bit Score: 55.71 E-value: 2.44e-10
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HOX | smart00389 | Homeodomain; DNA-binding factors that are involved in the transcriptional regulation of key ... |
267-338 | 1.34e-08 | ||||
Homeodomain; DNA-binding factors that are involved in the transcriptional regulation of key developmental processes Pssm-ID: 197696 [Multi-domain] Cd Length: 57 Bit Score: 50.71 E-value: 1.34e-08
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Homeobox | pfam00046 | Homeobox domain; |
271-334 | 5.37e-08 | ||||
Homeobox domain; Pssm-ID: 425441 Cd Length: 54 Bit Score: 49.04 E-value: 5.37e-08
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HTH_37 | pfam13744 | Helix-turn-helix domain; Members of this family contains a DNA-binding helix-turn-helix domain. |
164-217 | 2.92e-03 | ||||
Helix-turn-helix domain; Members of this family contains a DNA-binding helix-turn-helix domain. Pssm-ID: 433449 [Multi-domain] Cd Length: 80 Bit Score: 36.43 E-value: 2.92e-03
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HTH_XRE | cd00093 | Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the ... |
175-205 | 7.88e-03 | ||||
Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators. Pssm-ID: 238045 [Multi-domain] Cd Length: 58 Bit Score: 34.45 E-value: 7.88e-03
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Blast search parameters | ||||
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