|
Name |
Accession |
Description |
Interval |
E-value |
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
507-1072 |
1.65e-15 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 83.06 E-value: 1.65e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 507 PSTPKRQSTPKPPRVKPAPEPETRPS--AQTTKAPRKTKKPGHHRLRRPKTTR-SPEVPKSKPALEPATVTPEILVPKIV 583
Cdd:PHA03247 2553 PPLPPAAPPAAPDRSVPPPRPAPRPSepAVTSRARRPDAPPQSARPRAPVDDRgDPRGPAPPSPLPPDTHAPDPPPPSPS 2632
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 584 PKPPQ----KPKATRRPEVPQVKPAHEPVTFGSEAPALAIVTTTDIEPVITRTKA------SVTTLAPKPPRPRTHRQRT 653
Cdd:PHA03247 2633 PAANEpdphPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAarptvgSLTSLADPPPPPPTPEPAP 2712
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 654 KYKTTQSPKIP-------HSKPADLGPITSEPPLASTTKKVRRPRPKPQTTPHPEVPHTILVPATSLEPfIITEAPGTTL 726
Cdd:PHA03247 2713 HALVSATPLPPgpaaarqASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPR-RLTRPAVASL 2791
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 727 VPKLPQQPD----YPHPKPKTTRSPAASPTELVPTPVFEPVTPLKEDPVTTIVPitdLERVTDLETPVA----FRTEAPG 798
Cdd:PHA03247 2792 SESRESLPSpwdpADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGP---PPPSLPLGGSVApggdVRRRPPS 2868
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 799 TTLASKISQRTHRPRPRPRPRPRPRPRPKATLSPQAPETKTVPAVVLEPVTLRPEVQVTTLAPQKTQKKHRPSPKPKPVP 878
Cdd:PHA03247 2869 RSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTD 2948
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 879 SPEVTESKPVLPrvrepvtlrtETWVTTKAPKTPKRTRRPRPkpqttptpetpltkpvaatdlePSALSTEVPATVvlat 958
Cdd:PHA03247 2949 PAGAGEPSGAVP----------QPWLGALVPGRVAVPRFRVP----------------------QPAPSREAPASS---- 2992
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 959 alTPVTLRTKAPKTTTLAPNVQRTRRPHPRPKTTASTgvsesKSVSDDLElvafstESPQKTIVPKEPLHTTSKPKMPPS 1038
Cdd:PHA03247 2993 --TPPLTGHSLSRVSSWASSLALHEETDPPPVSLKQT-----LWPPDDTE------DSDADSLFDSDSERSDLEALDPLP 3059
|
570 580 590
....*....|....*....|....*....|....
gi 568995618 1039 PEVADTTSVPKDERLSLKPDPEVTHSETVLPPVT 1072
Cdd:PHA03247 3060 PEPHDPFAHEPDPATPEAGARESPSSQFGPPPLS 3093
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1353-1444 |
3.26e-10 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 58.28 E-value: 3.26e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 1353 NPPTNLTVVTVEgcPSFVILDWEKPLNDT--VTEYEVISRENGSFSGKNKSIQITNQTFSTVENLKPDTSYEFQVKPKNP 1430
Cdd:cd00063 2 SPPTNLRVTDVT--STSVTLSWTPPEDDGgpITGYVVEYREKGSGDWKEVEVTPGSETSYTLTGLKPGTEYEFRVRAVNG 79
|
90
....*....|....
gi 568995618 1431 LGEGPASNTVAFST 1444
Cdd:cd00063 80 GGESPPSESVTVTT 93
|
|
| FN3 |
smart00060 |
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1354-1434 |
9.84e-08 |
|
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 51.08 E-value: 9.84e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 1354 PPTNLTVVTVEgcPSFVILDWEKPLNDTVTEYEV-ISRENGSFSGKNKSIQITNQTFS-TVENLKPDTSYEFQVKPKNPL 1431
Cdd:smart00060 3 PPSNLRVTDVT--STSVTLSWEPPPDDGITGYIVgYRVEYREEGSEWKEVNVTPSSTSyTLTGLKPGTEYEFRVRAVNGA 80
|
...
gi 568995618 1432 GEG 1434
Cdd:smart00060 81 GEG 83
|
|
| fn3 |
pfam00041 |
Fibronectin type III domain; |
1354-1437 |
1.20e-06 |
|
Fibronectin type III domain;
Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 47.79 E-value: 1.20e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 1354 PPTNLTVVTVEgcPSFVILDWEKP--LNDTVTEYEVISRENGSFSGKNkSIQITNQTFS-TVENLKPDTSYEFQVKPKNP 1430
Cdd:pfam00041 2 APSNLTVTDVT--STSLTVSWTPPpdGNGPITGYEVEYRPKNSGEPWN-EITVPGTTTSvTLTGLKPGTEYEVRVQAVNG 78
|
....*..
gi 568995618 1431 LGEGPAS 1437
Cdd:pfam00041 79 GGEGPPS 85
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
495-758 |
2.18e-06 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 52.46 E-value: 2.18e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 495 PTTAAPQQTTSIPSTPKRQS---TPKPPRVKPAPE-----PETRPSAQT----TKAPRKTKKPGHhrLRRPKTTRSPEVP 562
Cdd:pfam03154 313 PSPAAPGQSQQRIHTPPSQSqlqSQQPPREQPLPPaplsmPHIKPPPTTpipqLPNPQSHKHPPH--LSGPSPFQMNSNL 390
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 563 KSKPALEPATVTPEILVPKIVPKPPQKPKATRRPEVPQVKPahepvtfgseapalaivtttdiePVITRTKASVTTLAPK 642
Cdd:pfam03154 391 PPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQQLPPPPAQP-----------------------PVLTQSQSLPPPAASH 447
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 643 PPRPRTHRQRTKYKTTQSPKIPHSKPADLGPITSEPPLASTTKKVRRPRPKPQTTPHPeVPHTilvPATSLEPFIITEAP 722
Cdd:pfam03154 448 PPTSGLHQVPSQSPFPQHPFVPGGPPPITPPSGPPTSTSSAMPGIQPPSSASVSSSGP-VPAA---VSCPLPPVQIKEEA 523
|
250 260 270
....*....|....*....|....*....|....*.
gi 568995618 723 gttlvPKLPQQPDYPHPKPkttRSPAASPTeLVPTP 758
Cdd:pfam03154 524 -----LDEAEEPESPPPPP---RSPSPEPT-VVNTP 550
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
943-1299 |
4.08e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 51.86 E-value: 4.08e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 943 PSALSTEVPATVVLATALTPVTLRTKAPKTTTLApnvQRTRRPHPRPKTTASTGVSESKSVSDDLELVAFSTESPQKTIV 1022
Cdd:PHA03247 2631 PSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRP---RRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPT 2707
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 1023 PKEPLH-TTSKPKMPPSPEVADTTSVPkderLSLKPDPEVTHSETVLPPVTFRVEPPKTTIAPLET-----------RGI 1090
Cdd:PHA03247 2708 PEPAPHaLVSATPLPPGPAAARQASPA----LPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPappaapaagppRRL 2783
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 1091 PLIPVISPRPSQEELQTAMEETDQS------TQELFTTKIPRTTELAKTTQAPhrlhTAPVRPRIPGRPH---------G 1155
Cdd:PHA03247 2784 TRPAVASLSESRESLPSPWDPADPPaavlapAAALPPAASPAGPLPPPTSAQP----TAPPPPPGPPPPSlplggsvapG 2859
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 1156 RPALNKTTTRPDKTKPRGTSHKNGVGTGTKQAPKPPSPGRNASVDSHATRKPGSVSGTRRPPIPHRHSSTRPvSPERRPL 1235
Cdd:PHA03247 2860 GDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQP-PPPPPPR 2938
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 568995618 1236 PPNNVTGKPGRAGIVSSSRVTSPPLKATLHPIGTATARPGAEQKEPTAPASEEEFGTTTDFSSS 1299
Cdd:PHA03247 2939 PQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLS 3002
|
|
| FN3 |
COG3401 |
Fibronectin type 3 domain [General function prediction only]; |
1338-1449 |
1.54e-04 |
|
Fibronectin type 3 domain [General function prediction only];
Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 46.53 E-value: 1.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 1338 PTEEATEGNATSPPqNPPTNLTVVTVEgcPSFVILDWEKPLNDTVTEYEvISRENGSfSGKNKSIQITNQTFSTVENLKP 1417
Cdd:COG3401 220 PSNEVSVTTPTTPP-SAPTGLTATADT--PGSVTLSWDPVTESDATGYR-VYRSNSG-DGPFTKVATVTTTSYTDTGLTN 294
|
90 100 110
....*....|....*....|....*....|...
gi 568995618 1418 DTSYEFQVKPKNPLG-EGPASNTVAFSTESADP 1449
Cdd:COG3401 295 GTTYYYRVTAVDAAGnESAPSNVVSVTTDLTPP 327
|
|
| fn3 |
pfam00041 |
Fibronectin type III domain; |
116-195 |
1.88e-04 |
|
Fibronectin type III domain;
Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 41.63 E-value: 1.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 116 KPLQLVVGTLTPSSVFLSWgflinphhdwTLPSHCPSD-RFYTIRYREKDKEKKWIFQLCPATET--IVENLKPNTVYEF 192
Cdd:pfam00041 2 APSNLTVTDVTSTSLTVSW----------TPPPDGNGPiTGYEVEYRPKNSGEPWNEITVPGTTTsvTLTGLKPGTEYEV 71
|
...
gi 568995618 193 GVK 195
Cdd:pfam00041 72 RVQ 74
|
|
| FN3 |
smart00060 |
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
114-195 |
2.77e-04 |
|
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 41.06 E-value: 2.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 114 PRKPLQLVVGTLTPSSVFLSWgflinphhdwtLPSHCPSDRFYTIRYREKDKEKKWIFQLCPA----TETIVENLKPNTV 189
Cdd:smart00060 1 PSPPSNLRVTDVTSTSVTLSW-----------EPPPDDGITGYIVGYRVEYREEGSEWKEVNVtpssTSYTLTGLKPGTE 69
|
....*.
gi 568995618 190 YEFGVK 195
Cdd:smart00060 70 YEFRVR 75
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
114-195 |
3.04e-04 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 41.33 E-value: 3.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 114 PRKPLQLVVGTLTPSSVFLSWgfliNPHHDWTLPSHcpsdrFYTIRYREKDKE--KKWIFQLCPATETIVENLKPNTVYE 191
Cdd:cd00063 1 PSPPTNLRVTDVTSTSVTLSW----TPPEDDGGPIT-----GYVVEYREKGSGdwKEVEVTPGSETSYTLTGLKPGTEYE 71
|
....
gi 568995618 192 FGVK 195
Cdd:cd00063 72 FRVR 75
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
491-703 |
3.14e-04 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 45.14 E-value: 3.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 491 PEVRPTTAAPQ---QTTSIPSTPKRQSTPKPPRVKPAPEPETrPSAQTTKAPRKTKKPGHHRLRRPKTTRSPEVPKSKPA 567
Cdd:NF033839 286 EPGNKKPSAPKpgmQPSPQPEKKEVKPEPETPKPEVKPQLEK-PKPEVKPQPEKPKPEVKPQLETPKPEVKPQPEKPKPE 364
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 568 LEPATVTPEilvpKIVPKPPQKPKATRRPEVPQVKPAHEPvtfGSEAPalaivtTTDIEPVITRTKASVTTlAPKPPRPR 647
Cdd:NF033839 365 VKPQPEKPK----PEVKPQPETPKPEVKPQPEKPKPEVKP---QPEKP------KPEVKPQPEKPKPEVKP-QPEKPKPE 430
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 568995618 648 THRQRTKYKttqspkiPHSKPADLGPITSEPPLASTTKKVRRP---RPKPQTTPHPEVP 703
Cdd:NF033839 431 VKPQPEKPK-------PEVKPQPEKPKPEVKPQPETPKPEVKPqpeKPKPEVKPQPEKP 482
|
|
| Not5 |
COG5665 |
CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription]; |
428-770 |
2.67e-03 |
|
CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription];
Pssm-ID: 444384 [Multi-domain] Cd Length: 874 Bit Score: 42.34 E-value: 2.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 428 ATYDVISSSTTSDETEIEIHTATR-------DPILDSVPPKTSRTAEQPRATLAPIEALFESRNVEIFTSPEVR------ 494
Cdd:COG5665 208 STPQAFNASATSGRSQHIVQAAKRvgvewwgDPSLLATPPATPATEEKSSQQPKSQPTSPSGGTTPPSTNQLTTsntpts 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 495 --------PTTAAPQQTTSIPSTPKRQSTPKPPRV--KPAPEPETRPSAQTTKAPRKTKKPGHhrlrRPKTTRSPEVPKS 564
Cdd:COG5665 288 takaqpqpPTKKQPAKEPPSDTASGNPSAPSVLINsdSPTSEDPATASVPTTEETTAFTTPSS----VPSTPAEKDTPAT 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 565 KPALEPATVTPEILV-PKIVPKPPQKPKATrrpevpqvkpAHEPVTFGSEAPalaivtttdiepvitrtkASVTTLAPKP 643
Cdd:COG5665 364 DLATPVSPTPPETSVdKKVSPDSATSSTKS----------EKEGGTASSPMP------------------PNIAIGAKDD 415
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 644 PRPRTHRQRTKYKTTQSPKIPHSKPADLGPITSEPPLAS--------TTKKVRRPRPKPQTTPHPEVPHTILVPATSLEP 715
Cdd:COG5665 416 VDATDPSQEAKEYTKNAPMTPEADSAPESSVRTEASPSAgsdlepenTTLRDPAPNAIPPPEDPSTIGRLSSGDKLANET 495
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 716 FIITEAPGTTLVPKLPQQ--PDYPHPKPKTT---RSPAASPTELVPTPVFEPVTPLKEDP 770
Cdd:COG5665 496 GPPVIRRDSTPSSTADQSivGVLAFGLDQRTqaeISVEAASRSNPLLNSQVKSFPLGKRS 555
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
950-1241 |
2.92e-03 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 42.21 E-value: 2.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 950 VPATVVLATALTPVTLRTKAPKTTTLAPNVQRTRRPHPRPKTTASTgvsesksvsddlelvafSTESPQKTIVPKEPLHT 1029
Cdd:pfam05109 405 ITRTATNATTTTHKVIFSKAPESTTTSPTLNTTGFAAPNTTTGLPS-----------------STHVPTNLTAPASTGPT 467
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 1030 TSKPKMpPSPEVADTTSvpKDERLSLKPDPEVTHSETVLPPVTfrvEPPKTTIAPLETRGIPLIPVISPRPSqeelQTAM 1109
Cdd:pfam05109 468 VSTADV-TSPTPAGTTS--GASPVTPSPSPRDNGTESKAPDMT---SPTSAVTTPTPNATSPTPAVTTPTPN----ATSP 537
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 1110 EETDQSTQELFTTKIPRTTELAKTTQAPHRLHTAPVRPRI-PGRPHGRPALNKTTTRPDKTKPRGTSHKNGVGtGTKQAP 1188
Cdd:pfam05109 538 TLGKTSPTSAVTTPTPNATSPTPAVTTPTPNATIPTLGKTsPTSAVTTPTPNATSPTVGETSPQANTTNHTLG-GTSSTP 616
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 568995618 1189 KPPSPGRNA-------------SVDSHATRKPGSVSGTRRPPIPHRHSSTRPVSPERRPLPPNNVT 1241
Cdd:pfam05109 617 VVTSPPKNAtsavttgqhnitsSSTSSMSLRPSSISETLSPSTSDNSTSHMPLLTSAHPTGGENIT 682
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
451-539 |
8.70e-03 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 39.60 E-value: 8.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 451 RDPIlDSVPPKTSRTAEQP--------RATLAPIEALFESRNVEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVK 522
Cdd:PRK11633 50 RDEP-DMMPAATQALPTQPpegaaeavRAGDAAAPSLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQKVEAP 128
|
90
....*....|....*..
gi 568995618 523 PAPEPETRPSAQTTKAP 539
Cdd:PRK11633 129 PAPKPEPKPVVEEKAAP 145
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
507-1072 |
1.65e-15 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 83.06 E-value: 1.65e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 507 PSTPKRQSTPKPPRVKPAPEPETRPS--AQTTKAPRKTKKPGHHRLRRPKTTR-SPEVPKSKPALEPATVTPEILVPKIV 583
Cdd:PHA03247 2553 PPLPPAAPPAAPDRSVPPPRPAPRPSepAVTSRARRPDAPPQSARPRAPVDDRgDPRGPAPPSPLPPDTHAPDPPPPSPS 2632
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 584 PKPPQ----KPKATRRPEVPQVKPAHEPVTFGSEAPALAIVTTTDIEPVITRTKA------SVTTLAPKPPRPRTHRQRT 653
Cdd:PHA03247 2633 PAANEpdphPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAarptvgSLTSLADPPPPPPTPEPAP 2712
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 654 KYKTTQSPKIP-------HSKPADLGPITSEPPLASTTKKVRRPRPKPQTTPHPEVPHTILVPATSLEPfIITEAPGTTL 726
Cdd:PHA03247 2713 HALVSATPLPPgpaaarqASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPR-RLTRPAVASL 2791
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 727 VPKLPQQPD----YPHPKPKTTRSPAASPTELVPTPVFEPVTPLKEDPVTTIVPitdLERVTDLETPVA----FRTEAPG 798
Cdd:PHA03247 2792 SESRESLPSpwdpADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGP---PPPSLPLGGSVApggdVRRRPPS 2868
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 799 TTLASKISQRTHRPRPRPRPRPRPRPRPKATLSPQAPETKTVPAVVLEPVTLRPEVQVTTLAPQKTQKKHRPSPKPKPVP 878
Cdd:PHA03247 2869 RSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTD 2948
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 879 SPEVTESKPVLPrvrepvtlrtETWVTTKAPKTPKRTRRPRPkpqttptpetpltkpvaatdlePSALSTEVPATVvlat 958
Cdd:PHA03247 2949 PAGAGEPSGAVP----------QPWLGALVPGRVAVPRFRVP----------------------QPAPSREAPASS---- 2992
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 959 alTPVTLRTKAPKTTTLAPNVQRTRRPHPRPKTTASTgvsesKSVSDDLElvafstESPQKTIVPKEPLHTTSKPKMPPS 1038
Cdd:PHA03247 2993 --TPPLTGHSLSRVSSWASSLALHEETDPPPVSLKQT-----LWPPDDTE------DSDADSLFDSDSERSDLEALDPLP 3059
|
570 580 590
....*....|....*....|....*....|....
gi 568995618 1039 PEVADTTSVPKDERLSLKPDPEVTHSETVLPPVT 1072
Cdd:PHA03247 3060 PEPHDPFAHEPDPATPEAGARESPSSQFGPPPLS 3093
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
509-776 |
1.53e-12 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 72.80 E-value: 1.53e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 509 TPKRQSTPKPPRV-----KPAPEPETRPSA--QTTKAPRKTKKPGHHRlrRPKTTRSPEVPKS--KPALEPATVTPEILV 579
Cdd:PTZ00449 542 EPKEGGKPGETKEgevgkKPGPAKEHKPSKipTLSKKPEFPKDPKHPK--DPEEPKKPKRPRSaqRPTRPKSPKLPELLD 619
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 580 PKIVPKPPQKPKATRRPevpqvkpahepvtfgseapalaivtttdiepvitrtkasvttlaPKPPRPRTHRQRTKYKTTQ 659
Cdd:PTZ00449 620 IPKSPKRPESPKSPKRP--------------------------------------------PPPQRPSSPERPEGPKIIK 655
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 660 SPKIPHSKPADLGPITSEPPLASTTKKVRRPRPKPQTTPHPEVPHTILVPATSLEPFIITEAPgTTLVPKLPQQPDYPHP 739
Cdd:PTZ00449 656 SPKPPKSPKPPFDPKFKEKFYDDYLDAAAKSKETKTTVVLDESFESILKETLPETPGTPFTTP-RPLPPKLPRDEEFPFE 734
|
250 260 270
....*....|....*....|....*....|....*..
gi 568995618 740 KPKTTRSPAASPTELVPTPVfEPVTPLKEDPVTTIVP 776
Cdd:PTZ00449 735 PIGDPDAEQPDDIEFFTPPE-EERTFFHETPADTPLP 770
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
448-743 |
2.45e-10 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 65.73 E-value: 2.45e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 448 TATRDPILDSVPPKTSRTAEQPRATLAPIEALFESRNVEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEP 527
Cdd:PHA03247 2696 TSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAP 2775
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 528 ETRPSAQTTKAPRKTKKPGHHRLRRPKTTRSPEVPKSKP-ALEPATVTPEILVP---KIVPKPPQKPKATRRPEVPQVKP 603
Cdd:PHA03247 2776 AAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPaAALPPAASPAGPLPpptSAQPTAPPPPPGPPPPSLPLGGS 2855
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 604 AHEPVTFGSEAPALAIVTTtdiepVITRTKASVTTLAPKPPRPRTHRQRTKYKTTQSPKIPHSKPADLGPITSEPPLAST 683
Cdd:PHA03247 2856 VAPGGDVRRRPPSRSPAAK-----PAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQ 2930
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568995618 684 TKKVRRPRPKPQTTPHPEVPHTILVPATSLEPFIITEAPGTTLVPKL---PQQPDYPHPKPKT 743
Cdd:PHA03247 2931 PPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFrvpQPAPSREAPASST 2993
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1353-1444 |
3.26e-10 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 58.28 E-value: 3.26e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 1353 NPPTNLTVVTVEgcPSFVILDWEKPLNDT--VTEYEVISRENGSFSGKNKSIQITNQTFSTVENLKPDTSYEFQVKPKNP 1430
Cdd:cd00063 2 SPPTNLRVTDVT--STSVTLSWTPPEDDGgpITGYVVEYREKGSGDWKEVEVTPGSETSYTLTGLKPGTEYEFRVRAVNG 79
|
90
....*....|....
gi 568995618 1431 LGEGPASNTVAFST 1444
Cdd:cd00063 80 GGESPPSESVTVTT 93
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
524-1074 |
2.52e-08 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 59.18 E-value: 2.52e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 524 APEPETRPSAQTTKAPRKTKKPGHHRLRRPKTTRSPEVPKskPALEPATVTPEILVPKIV-------------------P 584
Cdd:PHA03247 2477 APVYRRPAEARFPFAAGAAPDPGGGGPPDPDAPPAPSRLA--PAILPDEPVGEPVHPRMLtwirgleelasddagdpppP 2554
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 585 KPPQKPKATRRPEVPQVKPAHEPvtfgSEAPALAIVTTTDIEPVITRTKASV-------TTLAPKPPRPRTHR------- 650
Cdd:PHA03247 2555 LPPAAPPAAPDRSVPPPRPAPRP----SEPAVTSRARRPDAPPQSARPRAPVddrgdprGPAPPSPLPPDTHApdpppps 2630
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 651 QRTKYKTTQSPKIPHSKPADLGPITSEPPLASTTKKVRRPRPKPQTTPHPEVPHTILVPATSlepfiiteAPGTTLVpKL 730
Cdd:PHA03247 2631 PSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTV--------GSLTSLA-DP 2701
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 731 PQQPDYPHPKPKTTRSpaASPTELVPTPVFEPVTPLKEDPVTTIVPITDLERVTDLETPVAFRTEAPGTTLASKISQRTH 810
Cdd:PHA03247 2702 PPPPPTPEPAPHALVS--ATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGP 2779
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 811 RPRPRPRPRPRPRPRPKATLSPQAPETKTVPAVVLEPVTLRPEVQVTTLAPQKTQKKHRPSPKPKPVPSPEVTESKpVLP 890
Cdd:PHA03247 2780 PRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGS-VAP 2858
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 891 rvREPVTLRTETWVTTKAPKTPKRTRRPRPKPQTTPTPEtpltkpvaatdlEPSALSTEVPATVVLATALTPVTLRTKAP 970
Cdd:PHA03247 2859 --GGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRST------------ESFALPPDQPERPPQPQAPPPPQPQPQPP 2924
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 971 KTTTLAPNVQRTRRPHPRPKTTAST-GVSESKSVSDDLELVAFsteSPQKTIVPKEPLHTTSKPKMPPSPEVADTTSVPk 1049
Cdd:PHA03247 2925 PPPQPQPPPPPPPRPQPPLAPTTDPaGAGEPSGAVPQPWLGAL---VPGRVAVPRFRVPQPAPSREAPASSTPPLTGHS- 3000
|
570 580
....*....|....*....|....*
gi 568995618 1050 DERLSLKPDPEVTHSETVLPPVTFR 1074
Cdd:PHA03247 3001 LSRVSSWASSLALHEETDPPPVSLK 3025
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
545-1158 |
3.19e-08 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 58.80 E-value: 3.19e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 545 PGHHRLRRPKTTRSPEVPKSKPalEPATVTPEilvPKIVPKPPQKPKATRRPEVPQVKPAHEPV-------------TFG 611
Cdd:PHA03247 2475 PGAPVYRRPAEARFPFAAGAAP--DPGGGGPP---DPDAPPAPSRLAPAILPDEPVGEPVHPRMltwirgleelasdDAG 2549
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 612 SEAPALAivttTDIEPVITRTKASVTTLAPKPPRPRTHRQRTKYKTTQSPKIPHSKPADLGPITSEPPLASTTKKVRRPR 691
Cdd:PHA03247 2550 DPPPPLP----PAAPPAAPDRSVPPPRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPD 2625
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 692 PKPQT-TPHP-EVPHTILVPATSLEPFIITEAPGTTLVPK---LPQQPDYPHPKPKTTRSPAASPTELVPTPVFEPVTPL 766
Cdd:PHA03247 2626 PPPPSpSPAAnEPDPHPPPTVPPPERPRDDPAPGRVSRPRrarRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPP 2705
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 767 K--EDPVTTIVPITDLERVtdletPVAFRTEAPGTTLASkiSQRTHRPRPRPRPRPRPRPRPKATLSPQAPETKTVPAVV 844
Cdd:PHA03247 2706 PtpEPAPHALVSATPLPPG-----PAAARQASPALPAAP--APPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAG 2778
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 845 LEPVTLRPEVqvttlAPQKTQKKHRPSPKPKPVPSPEVTESKPVLPRVREPVT-LRTETWVTTKAPKTPKrtrrprpkpQ 923
Cdd:PHA03247 2779 PPRRLTRPAV-----ASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGpLPPPTSAQPTAPPPPP---------G 2844
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 924 TTPTPETPLTKPVAATDLEPSALSTEVPATvvlataltpVTLRTKAPKTTTLAPNVQRTRRPHPRPKTtastgvSESKSV 1003
Cdd:PHA03247 2845 PPPPSLPLGGSVAPGGDVRRRPPSRSPAAK---------PAAPARPPVRRLARPAVSRSTESFALPPD------QPERPP 2909
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 1004 SDDLELVAFSTESPQKTIVPKEPLHTTSKPKMPPSPevaDTTSVPKDERLSLKPDPEVTHSETVLPPVT-FRVEPPKTTI 1082
Cdd:PHA03247 2910 QPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAP---TTDPAGAGEPSGAVPQPWLGALVPGRVAVPrFRVPQPAPSR 2986
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 1083 APLETRGIPLIPVISPRPSQEELQTAM-EETDQSTQELFTT-KIPRTTELAKTTQA----PHRLHTAPVRPrIPGRPHGR 1156
Cdd:PHA03247 2987 EAPASSTPPLTGHSLSRVSSWASSLALhEETDPPPVSLKQTlWPPDDTEDSDADSLfdsdSERSDLEALDP-LPPEPHDP 3065
|
..
gi 568995618 1157 PA 1158
Cdd:PHA03247 3066 FA 3067
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
494-844 |
6.21e-08 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 57.78 E-value: 6.21e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 494 RPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEpetrpSAQTTKAPRKTKKPGhhRLRRPKTTRSPEVPKSKPALEPATV 573
Cdd:PTZ00449 560 KPGPAKEHKPSKIPTLSKKPEFPKDPKHPKDPE-----EPKKPKRPRSAQRPT--RPKSPKLPELLDIPKSPKRPESPKS 632
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 574 tpeilvPKiVPKPPQKPKATRRPEVPQV----KPAHEP-VTFGseaPALAIVTTTDIEPVITRTKASVTTLAPKpprpRT 648
Cdd:PTZ00449 633 ------PK-RPPPPQRPSSPERPEGPKIikspKPPKSPkPPFD---PKFKEKFYDDYLDAAAKSKETKTTVVLD----ES 698
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 649 HRQRTKYKTTQSPKIPHSKPADLGPITSEPPLASTT--KKVRRPRPKPQTTPHPEVPHTILV---PATSLEPFIITEAPG 723
Cdd:PTZ00449 699 FESILKETLPETPGTPFTTPRPLPPKLPRDEEFPFEpiGDPDAEQPDDIEFFTPPEEERTFFhetPADTPLPDILAEEFK 778
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 724 TTLVPKLPQQPDYPHPKPKttrspaaSPTELVPTPVFE-PVTPLK----------------------EDPVTTIVPITDL 780
Cdd:PTZ00449 779 EEDIHAETGEPDEAMKRPD-------SPSEHEDKPPGDhPSLPKKrhrldglalsttdlesdagriaKDASGKIVKLKRS 851
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 781 ERVTDLET--------PVAFR-------TEAPGT-TLASKISQRTHRPRPRPRPRPRPRPRPKATLSPQAPETKTVPAVV 844
Cdd:PTZ00449 852 KSFDDLTTveeaeemgAEARKivvdddgTEADDEdTHPPEEKHKSEVRRRRPPKKPSKPKKPSKPKKPKKPDSAFIPSII 931
|
|
| FN3 |
smart00060 |
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1354-1434 |
9.84e-08 |
|
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 51.08 E-value: 9.84e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 1354 PPTNLTVVTVEgcPSFVILDWEKPLNDTVTEYEV-ISRENGSFSGKNKSIQITNQTFS-TVENLKPDTSYEFQVKPKNPL 1431
Cdd:smart00060 3 PPSNLRVTDVT--STSVTLSWEPPPDDGITGYIVgYRVEYREEGSEWKEVNVTPSSTSyTLTGLKPGTEYEFRVRAVNGA 80
|
...
gi 568995618 1432 GEG 1434
Cdd:smart00060 81 GEG 83
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
381-767 |
1.21e-07 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 56.62 E-value: 1.21e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 381 KRFPEFPEAKTAFPLEKPRGSWASSEEPwVVPGAKTSEdSRVVQPQTATYDVISSSTTSDETEIEI---------HTATR 451
Cdd:PTZ00449 494 KKLAPIEEEDSDKHDEPPEGPEASGLPP-KAPGDKEGE-EGEHEDSKESDEPKEGGKPGETKEGEVgkkpgpakeHKPSK 571
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 452 DPILDSVP-----PKTSRTAEQPRATLAPIEAlfesrnveiftSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRvkpAPE 526
Cdd:PTZ00449 572 IPTLSKKPefpkdPKHPKDPEEPKKPKRPRSA-----------QRPTRPKSPKLPELLDIPKSPKRPESPKSPK---RPP 637
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 527 PETRPSAQttkaprktkkpghhrlRRPKTTRSPEVPKSKPAlepatvtpeilvpkivPKPPQKPKATRRPEVPQVKPAHE 606
Cdd:PTZ00449 638 PPQRPSSP----------------ERPEGPKIIKSPKPPKS----------------PKPPFDPKFKEKFYDDYLDAAAK 685
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 607 PVTFGSEAPALAIVTTTDIEPVITRTKASVTTLAPKPP-RPRThrqrtkykttqsPKIPHSKPADlgpitsePPLASTTK 685
Cdd:PTZ00449 686 SKETKTTVVLDESFESILKETLPETPGTPFTTPRPLPPkLPRD------------EEFPFEPIGD-------PDAEQPDD 746
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 686 KVRRPRPKPQTTPHPEvphtilVPATSLEPFIITEAPGTTLVPKLPQQPDYPHPKPKttrspaaSPTELVPTPVFE-PVT 764
Cdd:PTZ00449 747 IEFFTPPEEERTFFHE------TPADTPLPDILAEEFKEEDIHAETGEPDEAMKRPD-------SPSEHEDKPPGDhPSL 813
|
...
gi 568995618 765 PLK 767
Cdd:PTZ00449 814 PKK 816
|
|
| fn3 |
pfam00041 |
Fibronectin type III domain; |
1354-1437 |
1.20e-06 |
|
Fibronectin type III domain;
Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 47.79 E-value: 1.20e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 1354 PPTNLTVVTVEgcPSFVILDWEKP--LNDTVTEYEVISRENGSFSGKNkSIQITNQTFS-TVENLKPDTSYEFQVKPKNP 1430
Cdd:pfam00041 2 APSNLTVTDVT--STSLTVSWTPPpdGNGPITGYEVEYRPKNSGEPWN-EITVPGTTTSvTLTGLKPGTEYEVRVQAVNG 78
|
....*..
gi 568995618 1431 LGEGPAS 1437
Cdd:pfam00041 79 GGEGPPS 85
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
495-758 |
2.18e-06 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 52.46 E-value: 2.18e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 495 PTTAAPQQTTSIPSTPKRQS---TPKPPRVKPAPE-----PETRPSAQT----TKAPRKTKKPGHhrLRRPKTTRSPEVP 562
Cdd:pfam03154 313 PSPAAPGQSQQRIHTPPSQSqlqSQQPPREQPLPPaplsmPHIKPPPTTpipqLPNPQSHKHPPH--LSGPSPFQMNSNL 390
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 563 KSKPALEPATVTPEILVPKIVPKPPQKPKATRRPEVPQVKPahepvtfgseapalaivtttdiePVITRTKASVTTLAPK 642
Cdd:pfam03154 391 PPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQQLPPPPAQP-----------------------PVLTQSQSLPPPAASH 447
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 643 PPRPRTHRQRTKYKTTQSPKIPHSKPADLGPITSEPPLASTTKKVRRPRPKPQTTPHPeVPHTilvPATSLEPFIITEAP 722
Cdd:pfam03154 448 PPTSGLHQVPSQSPFPQHPFVPGGPPPITPPSGPPTSTSSAMPGIQPPSSASVSSSGP-VPAA---VSCPLPPVQIKEEA 523
|
250 260 270
....*....|....*....|....*....|....*.
gi 568995618 723 gttlvPKLPQQPDYPHPKPkttRSPAASPTeLVPTP 758
Cdd:pfam03154 524 -----LDEAEEPESPPPPP---RSPSPEPT-VVNTP 550
|
|
| PHA03377 |
PHA03377 |
EBNA-3C; Provisional |
517-761 |
4.06e-06 |
|
EBNA-3C; Provisional
Pssm-ID: 177614 [Multi-domain] Cd Length: 1000 Bit Score: 51.59 E-value: 4.06e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 517 KPPRVKPAPEPETRPSAQT---TKAPRKTKKPGHHRLRRPKTTRSPEVPkskpaLEPATVTPEILVPKIVPKPPQKPKAT 593
Cdd:PHA03377 414 RKPRTLPWPTPKTHPVKRTlvkTSGRSDEAEQAQSTPERPGPSDQPSVP-----VEPAHLTPVEHTTVILHQPPQSPPTV 488
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 594 rrpevpQVKPAHEPVTFGSEApalAIVTTTDIEPVITRTKASVTTLAPKPPRPRTHRQRTKYKTTQSPK---IPHSKPAD 670
Cdd:PHA03377 489 ------AIKPAPPPSRRRRGA---CVVYDDDIIEVIDVETTEEEESVTQPAKPHRKVQDGFQRSGRRQKratPPKVSPSD 559
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 671 LGPITSEPPLASTTKKVRRPRPKPQTTPHPEVPhtilvpatslepfiitEAPGTTLVPKLPQQPdyPHPKPKTTRSPAAS 750
Cdd:PHA03377 560 RGPPKASPPVMAPPSTGPRVMATPSTGPRDMAP----------------PSTGPRQQAKCKDGP--PASGPHEKQPPSSA 621
|
250
....*....|.
gi 568995618 751 PTELVPTPVFE 761
Cdd:PHA03377 622 PRDMAPSVVRM 632
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
943-1299 |
4.08e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 51.86 E-value: 4.08e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 943 PSALSTEVPATVVLATALTPVTLRTKAPKTTTLApnvQRTRRPHPRPKTTASTGVSESKSVSDDLELVAFSTESPQKTIV 1022
Cdd:PHA03247 2631 PSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRP---RRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPT 2707
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 1023 PKEPLH-TTSKPKMPPSPEVADTTSVPkderLSLKPDPEVTHSETVLPPVTFRVEPPKTTIAPLET-----------RGI 1090
Cdd:PHA03247 2708 PEPAPHaLVSATPLPPGPAAARQASPA----LPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPappaapaagppRRL 2783
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 1091 PLIPVISPRPSQEELQTAMEETDQS------TQELFTTKIPRTTELAKTTQAPhrlhTAPVRPRIPGRPH---------G 1155
Cdd:PHA03247 2784 TRPAVASLSESRESLPSPWDPADPPaavlapAAALPPAASPAGPLPPPTSAQP----TAPPPPPGPPPPSlplggsvapG 2859
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 1156 RPALNKTTTRPDKTKPRGTSHKNGVGTGTKQAPKPPSPGRNASVDSHATRKPGSVSGTRRPPIPHRHSSTRPvSPERRPL 1235
Cdd:PHA03247 2860 GDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQP-PPPPPPR 2938
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 568995618 1236 PPNNVTGKPGRAGIVSSSRVTSPPLKATLHPIGTATARPGAEQKEPTAPASEEEFGTTTDFSSS 1299
Cdd:PHA03247 2939 PQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLS 3002
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1136-1356 |
3.60e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 48.78 E-value: 3.60e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 1136 APHRLHTAPVRPRIPGRPHGRP---ALNKTTTRPDKTKPRGTSHKNGVGTGTKQAPKPPSPgrnASVDSHATRKPGSVSG 1212
Cdd:PHA03247 2556 PPAAPPAAPDRSVPPPRPAPRPsepAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSP---LPPDTHAPDPPPPSPS 2632
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 1213 TRRPPIPHRHSSTRPVSPERRPLPPNNVTGKPGRAGIVSSSRVTSPPLKATLHPIGTATARPGAEQKEPTAPASEEEFGT 1292
Cdd:PHA03247 2633 PAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAP 2712
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568995618 1293 TTDFSSSPTKETDPLGKPRFIGPHVRYIPKPENKPCSITDSVRRFPTEEATEG-NATSPPQNPPT 1356
Cdd:PHA03247 2713 HALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGpPAPAPPAAPAA 2777
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1013-1355 |
1.25e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 47.24 E-value: 1.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 1013 STESPQKTIVPKEPLhTTSKPKMPPSPEVADTTSVPKDERlslkPDPEVTHSETVLPPVTFRVEPPKTTIAPLETRGIPL 1092
Cdd:PHA03247 2567 SVPPPRPAPRPSEPA-VTSRARRPDAPPQSARPRAPVDDR----GDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPH 2641
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 1093 IPVISPRPSQEELQTAMEETDQSTQelfTTKIPRTTELAKTTQAPHRLHTAP--------VRPRIPGR-PHGRP------ 1157
Cdd:PHA03247 2642 PPPTVPPPERPRDDPAPGRVSRPRR---ARRLGRAAQASSPPQRPRRRAARPtvgsltslADPPPPPPtPEPAPhalvsa 2718
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 1158 ---------ALNKTTTRPDKTKPRGTSHKNGVGTGTKQAPKPPSPGRNASVDSHATRKPGSVSGTRRPPIPHRHSSTRPV 1228
Cdd:PHA03247 2719 tplppgpaaARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESL 2798
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 1229 SPERRPLPPNNVTgkPGRAGIVSSSRVTSPPLKATLHPIGTATARPGAEQKEPTAPASEEEFGttTDFSSSPTKETDPLG 1308
Cdd:PHA03247 2799 PSPWDPADPPAAV--LAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPG--GDVRRRPPSRSPAAK 2874
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 568995618 1309 KPRFIGPHVRYIPKPENKPCSIT-----DSVRRFPTEEATEGNATSPPQNPP 1355
Cdd:PHA03247 2875 PAAPARPPVRRLARPAVSRSTESfalppDQPERPPQPQAPPPPQPQPQPPPP 2926
|
|
| FN3 |
COG3401 |
Fibronectin type 3 domain [General function prediction only]; |
1338-1449 |
1.54e-04 |
|
Fibronectin type 3 domain [General function prediction only];
Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 46.53 E-value: 1.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 1338 PTEEATEGNATSPPqNPPTNLTVVTVEgcPSFVILDWEKPLNDTVTEYEvISRENGSfSGKNKSIQITNQTFSTVENLKP 1417
Cdd:COG3401 220 PSNEVSVTTPTTPP-SAPTGLTATADT--PGSVTLSWDPVTESDATGYR-VYRSNSG-DGPFTKVATVTTTSYTDTGLTN 294
|
90 100 110
....*....|....*....|....*....|...
gi 568995618 1418 DTSYEFQVKPKNPLG-EGPASNTVAFSTESADP 1449
Cdd:COG3401 295 GTTYYYRVTAVDAAGnESAPSNVVSVTTDLTPP 327
|
|
| fn3 |
pfam00041 |
Fibronectin type III domain; |
116-195 |
1.88e-04 |
|
Fibronectin type III domain;
Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 41.63 E-value: 1.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 116 KPLQLVVGTLTPSSVFLSWgflinphhdwTLPSHCPSD-RFYTIRYREKDKEKKWIFQLCPATET--IVENLKPNTVYEF 192
Cdd:pfam00041 2 APSNLTVTDVTSTSLTVSW----------TPPPDGNGPiTGYEVEYRPKNSGEPWNEITVPGTTTsvTLTGLKPGTEYEV 71
|
...
gi 568995618 193 GVK 195
Cdd:pfam00041 72 RVQ 74
|
|
| FN3 |
COG3401 |
Fibronectin type 3 domain [General function prediction only]; |
1338-1492 |
2.12e-04 |
|
Fibronectin type 3 domain [General function prediction only];
Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 45.76 E-value: 2.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 1338 PTEEATEGNATSPPQnPPTNLTVVTVEgcPSFVILDWEKPLNDTVTEYEV--ISRENGSFSGKNKSIqitNQTFSTVENL 1415
Cdd:COG3401 314 PSNVVSVTTDLTPPA-APSGLTATAVG--SSSITLSWTASSDADVTGYNVyrSTSGGGTYTKIAETV---TTTSYTDTGL 387
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568995618 1416 KPDTSYEFQVKPKNPLG-EGPASNTVAFSTESADPRVSEPISAGRDAIWTERPFNSDSYSECKGKQYVKRTWYKKFVG 1492
Cdd:COG3401 388 TPGTTYYYKVTAVDAAGnESAPSEEVSATTASAASGESLTASVDAVPLTDVAGATAAASAASNPGVSAAVLADGGDTG 465
|
|
| FN3 |
smart00060 |
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
114-195 |
2.77e-04 |
|
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 41.06 E-value: 2.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 114 PRKPLQLVVGTLTPSSVFLSWgflinphhdwtLPSHCPSDRFYTIRYREKDKEKKWIFQLCPA----TETIVENLKPNTV 189
Cdd:smart00060 1 PSPPSNLRVTDVTSTSVTLSW-----------EPPPDDGITGYIVGYRVEYREEGSEWKEVNVtpssTSYTLTGLKPGTE 69
|
....*.
gi 568995618 190 YEFGVK 195
Cdd:smart00060 70 YEFRVR 75
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
114-195 |
3.04e-04 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 41.33 E-value: 3.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 114 PRKPLQLVVGTLTPSSVFLSWgfliNPHHDWTLPSHcpsdrFYTIRYREKDKE--KKWIFQLCPATETIVENLKPNTVYE 191
Cdd:cd00063 1 PSPPTNLRVTDVTSTSVTLSW----TPPEDDGGPIT-----GYVVEYREKGSGdwKEVEVTPGSETSYTLTGLKPGTEYE 71
|
....
gi 568995618 192 FGVK 195
Cdd:cd00063 72 FRVR 75
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
491-703 |
3.14e-04 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 45.14 E-value: 3.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 491 PEVRPTTAAPQ---QTTSIPSTPKRQSTPKPPRVKPAPEPETrPSAQTTKAPRKTKKPGHHRLRRPKTTRSPEVPKSKPA 567
Cdd:NF033839 286 EPGNKKPSAPKpgmQPSPQPEKKEVKPEPETPKPEVKPQLEK-PKPEVKPQPEKPKPEVKPQLETPKPEVKPQPEKPKPE 364
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 568 LEPATVTPEilvpKIVPKPPQKPKATRRPEVPQVKPAHEPvtfGSEAPalaivtTTDIEPVITRTKASVTTlAPKPPRPR 647
Cdd:NF033839 365 VKPQPEKPK----PEVKPQPETPKPEVKPQPEKPKPEVKP---QPEKP------KPEVKPQPEKPKPEVKP-QPEKPKPE 430
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 568995618 648 THRQRTKYKttqspkiPHSKPADLGPITSEPPLASTTKKVRRP---RPKPQTTPHPEVP 703
Cdd:NF033839 431 VKPQPEKPK-------PEVKPQPEKPKPEVKPQPETPKPEVKPqpeKPKPEVKPQPEKP 482
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
515-626 |
4.88e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 44.80 E-value: 4.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 515 TPKPPRVKPAPEPETRPSAQTTKAPRKTKKPGHHRLRRPKttrsPEVPKSKPalePATVTPEILVPKIVPKPPQKPKATR 594
Cdd:PRK14950 361 VPVPAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPK----EPVRETAT---PPPVPPRPVAPPVPHTPESAPKLTR 433
|
90 100 110
....*....|....*....|....*....|..
gi 568995618 595 RPEVPQVKPAHEPVTFGSEAPALAIVTTTDIE 626
Cdd:PRK14950 434 AAIPVDEKPKYTPPAPPKEEEKALIADGDVLE 465
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
553-775 |
7.84e-04 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 44.15 E-value: 7.84e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 553 PKTTRSPEVPKSKPalePATVTPEILVPKIVPKPPQKPKATRRPEVP-----QVKPAHEPVTFGSEAPALAIVTTTDIEP 627
Cdd:PLN03209 330 PKESDAADGPKPVP---TKPVTPEAPSPPIEEEPPQPKAVVPRPLSPytayeDLKPPTSPIPTPPSSSPASSKSVDAVAK 406
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 628 VITRTKASVTTLAPKPPRPRTHRQRTKyktTQSPKIPHSKPADLGPITSepplasttkkvrrPRPKPQTTPHPEVPHTIL 707
Cdd:PLN03209 407 PAEPDVVPSPGSASNVPEVEPAQVEAK---KTRPLSPYARYEDLKPPTS-------------PSPTAPTGVSPSVSSTSS 470
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568995618 708 VPATSLEP----FIITEAPGTTLVPKLPQQPDYPHPKPKTTRSPAASPTELVPTPVFEPVTPLKEDPVTTIV 775
Cdd:PLN03209 471 VPAVPDTApataATDAAAPPPANMRPLSPYAVYDDLKPPTSPSPAAPVGKVAPSSTNEVVKVGNSAPPTALA 542
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
1024-1302 |
8.00e-04 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 44.30 E-value: 8.00e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 1024 KEPLHTTSKPKMPPSPEVADTTSVPKderlslKPDPEVTHSETVLPPVTFRVEPPKTTIAPLETRgiplipviSPRPSQE 1103
Cdd:PTZ00449 534 HEDSKESDEPKEGGKPGETKEGEVGK------KPGPAKEHKPSKIPTLSKKPEFPKDPKHPKDPE--------EPKKPKR 599
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 1104 ELQTAMEETDQSTQELFTTKIPRTTELAKTTQAPHRlHTAPVRPRIPGRPHGrPALNKTTTRPDKTKP----------RG 1173
Cdd:PTZ00449 600 PRSAQRPTRPKSPKLPELLDIPKSPKRPESPKSPKR-PPPPQRPSSPERPEG-PKIIKSPKPPKSPKPpfdpkfkekfYD 677
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 1174 TSHKNGVGTGTKQAPKPPSPGRNASVDSHATRKPGSVSGTRRPPIPHR-HSSTRPVSPERRPLPPNNVTGKPGRAGIVSS 1252
Cdd:PTZ00449 678 DYLDAAAKSKETKTTVVLDESFESILKETLPETPGTPFTTPRPLPPKLpRDEEFPFEPIGDPDAEQPDDIEFFTPPEEER 757
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 1253 SRVTSPPLKATLHPIGT----------ATARPGAEQKEPTAPaSEEEFGTTTDFSSSPTK 1302
Cdd:PTZ00449 758 TFFHETPADTPLPDILAeefkeedihaETGEPDEAMKRPDSP-SEHEDKPPGDHPSLPKK 816
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
491-705 |
8.70e-04 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 44.29 E-value: 8.70e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 491 PEVRPTTAapQQTTSIPSTPKRqSTPKPPRVKPAPEPETRPSAQTTKAPRKTKKPGH----HRLRRPKTTRSPEV---PK 563
Cdd:PHA03378 576 PLTSPTTS--QLASSAPSYAQT-PWPVPHPSQTPEPPTTQSHIPETSAPRQWPMPLRpipmRPLRMQPITFNVLVfptPH 652
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 564 SKPALEPATVTPEILVPKIVP-----------KPPQKPKATRRPEVPQVKPAHEPVTFGSEAPALAIVTTTDIEPVITRT 632
Cdd:PHA03378 653 QPPQVEITPYKPTWTQIGHIPyqpsptgantmLPIQWAPGTMQPPPRAPTPMRPPAAPPGRAQRPAAATGRARPPAAAPG 732
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568995618 633 KASVTTLAPKPPRPRTHRQRTKYKTTQSPKIPHSKPADLGPITSEPPLASTTKKVRRPRPKPQTTPHPEVPHT 705
Cdd:PHA03378 733 RARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGAPTPQPPPQAPPAPQQRPRGAPTPQPPPQAGPT 805
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
420-747 |
1.20e-03 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 43.92 E-value: 1.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 420 SRVVQPQTATYDVISSSTTSDE---------TEIEIHTATRDPILDSVPPKTSRTA-EQPRATLAPIEALFESRNVeIFT 489
Cdd:PRK10263 297 NRATQPEYDEYDPLLNGAPITEpvavaaaatTATQSWAAPVEPVTQTPPVASVDVPpAQPTVAWQPVPGPQTGEPV-IAP 375
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 490 SPEVRPTTAAPQQTTSIPSTPKRQSTP--KPPRVKPAPEPETRPSAQTTKAPRKTKKPGHHRLRRPKTTRSPEVPKSKPA 567
Cdd:PRK10263 376 APEGYPQQSQYAQPAVQYNEPLQQPVQpqQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQST 455
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 568 LEP-ATVTPEILVPKIVPKPP---------QKPKATRRPEVPQVKPAHEPVTFGSEapalaivtttdIEPVITRTKASVT 637
Cdd:PRK10263 456 FAPqSTYQTEQTYQQPAAQEPlyqqpqpveQQPVVEPEPVVEETKPARPPLYYFEE-----------VEEKRAREREQLA 524
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 638 TLAPKPPRPrthrqrTKYKTTQSPKIPHSKPADLGPITSEPPLASTTKKVRrprpkpQTTPHPEVPHTILVPATSLepfi 717
Cdd:PRK10263 525 AWYQPIPEP------VKEPEPIKSSLKAPSVAAVPPVEAAAAVSPLASGVK------KATLATGAAATVAAPVFSL---- 588
|
330 340 350
....*....|....*....|....*....|
gi 568995618 718 iteAPGTTLVPKLPQQPDYPHPKPKTTRSP 747
Cdd:PRK10263 589 ---ANSGGPRPQVKEGIGPQLPRPKRIRVP 615
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
458-771 |
1.22e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 43.68 E-value: 1.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 458 VPPKTSRTAEQPRATLAP---IEALFESRNVEIFTSPEVRPTTAAPQQTTsIPSTPKRQSTPKP-------PRVKPAPEP 527
Cdd:PRK07003 372 VPARVAGAVPAPGARAAAavgASAVPAVTAVTGAAGAALAPKAAAAAAAT-RAEAPPAAPAPPAtadrgddAADGDAPVP 450
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 528 ---ETRPSAQTTKAPRKTKKPGHHRLRRPKTTRSPEVPKSKPALEPATVTPEILVPKIVPKPPQ--------KPKATRRP 596
Cdd:PRK07003 451 akaNARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAaasredapAAAAPPAP 530
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 597 EVPQVKPA--HEPVTFGSEAPALAIVTTTDIEPVITRTK--------ASVTTLAPKPPRPRTHRQrtkyktTQSPKIPHS 666
Cdd:PRK07003 531 EARPPTPAaaAPAARAGGAAAALDVLRNAGMRVSSDRGAraaaaakpAAAPAAAPKPAAPRVAVQ------VPTPRARAA 604
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 667 KPADLGPITSEPPLASTTkkvRRPRPkpqttPHPEVPHTILVPATSLEPFIiteAPGTTLVPKLPQQPDYPHPKPKTTRS 746
Cdd:PRK07003 605 TGDAPPNGAARAEQAAES---RGAPP-----PWEDIPPDDYVPLSADEGFG---GPDDGFVPVFDSGPDDVRVAPKPADA 673
|
330 340
....*....|....*....|....*
gi 568995618 747 PAAsPTELVPTPvfePVTPLkeDPV 771
Cdd:PRK07003 674 PAP-PVDTRPLP---PAIPL--DAI 692
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
491-766 |
1.59e-03 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 43.22 E-value: 1.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 491 PEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQTTKAPRKTKKPGHHRLRRPKTTRSPEVPKSKPALEP 570
Cdd:pfam03154 172 PVLQAQSGAASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQSTAAPHTLIQQTPTLHPQRLPSPHPPLQP 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 571 ATVT--PEILVPKIVPKPPQKPKATRRPEVPQVKPAHEPvtfgseapalaivtttdiepvitrtkasvttlAPKPPRPRT 648
Cdd:pfam03154 252 MTQPppPSQVSPQPLPQPSLHGQMPPMPHSLQTGPSHMQ--------------------------------HPVPPQPFP 299
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 649 hrqrTKYKTTQSPKIPHSKPADLGPITSEPPLASTTKKVRRPRPkPQTTPHPEVPhtilVPATSLEPfiiteaPGTTLVP 728
Cdd:pfam03154 300 ----LTPQSSQSQVPPGPSPAAPGQSQQRIHTPPSQSQLQSQQP-PREQPLPPAP----LSMPHIKP------PPTTPIP 364
|
250 260 270
....*....|....*....|....*....|....*...
gi 568995618 729 KLPQQPDYPHPKPKTTRSPAASPTELVPTPVFEPVTPL 766
Cdd:pfam03154 365 QLPNPQSHKHPPHLSGPSPFQMNSNLPPPPALKPLSSL 402
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
490-618 |
1.67e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 42.93 E-value: 1.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 490 SPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQTTKAPRKTKKPGHHRLRRPKTTRSPEV-PKSKPAL 568
Cdd:PRK07994 370 VPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKKSePAAASRA 449
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 568995618 569 EPATVTPEIL-----VPKIVPKPPQKPKATR-RPEVPQVKPAHEPVTFGSEAPALA 618
Cdd:PRK07994 450 RPVNSALERLasvrpAPSALEKAPAKKEAYRwKATNPVEVKKEPVATPKALKKALE 505
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
480-628 |
2.04e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 42.87 E-value: 2.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 480 FESRNVEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQTTKAPRKTKKPghhrLRRPKTTRSP 559
Cdd:PRK14950 351 LELAVIEALLVPVPAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVRETATPPPVPPRP----VAPPVPHTPE 426
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568995618 560 EVPKSKPALEPATVTPEILVPkivPKPPQKPKATRRPEV--PQVKPAHEPVT--FGSEAPALAIVTTTDIEPV 628
Cdd:PRK14950 427 SAPKLTRAAIPVDEKPKYTPP---APPKEEEKALIADGDvlEQLEAIWKQILrdVPPRSPAVQALLSSGVRPV 496
|
|
| dnaA |
PRK14086 |
chromosomal replication initiator protein DnaA; |
515-718 |
2.19e-03 |
|
chromosomal replication initiator protein DnaA;
Pssm-ID: 237605 [Multi-domain] Cd Length: 617 Bit Score: 42.51 E-value: 2.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 515 TPKPPRVKPAPEPETRPSAQTTKAPRKTKKP----GHHRL--RRPKTTRSPEVPKSKPALEPATVTPEilvPKIVPKPP- 587
Cdd:PRK14086 87 TVDPSAGEPAPPPPHARRTSEPELPRPGRRPyegyGGPRAddRPPGLPRQDQLPTARPAYPAYQQRPE---PGAWPRAAd 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 588 ----QKPKATRRPEVPQVKPAHEPVTFGSEAPALAivtttDIEPVITRTKASVTTLAPKPPRPRTHRQRTKYKTTQSPKI 663
Cdd:PRK14086 164 dygwQQQRLGFPPRAPYASPASYAPEQERDREPYD-----AGRPEYDQRRRDYDHPRPDWDRPRRDRTDRPEPPPGAGHV 238
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 568995618 664 PHSKPADLGPItSEPPLASTTKKVRRPRPKPQTTPHPEVPHTILVPATSLEPFII 718
Cdd:PRK14086 239 HRGGPGPPERD-DAPVVPIRPSAPGPLAAQPAPAPGPGEPTARLNPKYTFDTFVI 292
|
|
| PHA03369 |
PHA03369 |
capsid maturational protease; Provisional |
491-779 |
2.26e-03 |
|
capsid maturational protease; Provisional
Pssm-ID: 223061 [Multi-domain] Cd Length: 663 Bit Score: 42.68 E-value: 2.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 491 PEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQTTKAPRKTKKPGHHRLRRPKTTRSPEVPKSKPALEP 570
Cdd:PHA03369 362 AAAKVAVIAAPQTHTGPADRQRPQRPDGIPYSVPARSPMTAYPPVPQFCGDPGLVSPYNPQSPGTSYGPEPVGPVPPQPT 441
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 571 ATVTPEILVPKIVPKPPQKPKATRRPEVPQVKPAHEPVTFGSEAPalaivtTTDIEPVITRTKASVTTLAPKPPRPRTHR 650
Cdd:PHA03369 442 NPYVMPISMANMVYPGHPQEHGHERKRKRGGELKEELIETLKLVK------KLKEEQESLAKELEATAHKSEIKKIAESE 515
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 651 QRTKYKTTQSPKIPHSKPADLGPITSEPPLASTTKKVRRPRPKPQTTPHPEVPHTILVPATSLEPFIITEAPGT------ 724
Cdd:PHA03369 516 FKNAGAKTAAANIEPNCSADAAAPATKRARPETKTELEAVVRFPYQIRNMESPAFVHSFTSTTLAAAAGQGSDTaealag 595
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 568995618 725 ---TLVPKLPQQPDYPHpkpktTRSPAASPTELVPTPVFEPVTPLKEDPVTTIVPITD 779
Cdd:PHA03369 596 aieTLLTQASAQPAGLS-----LPAPAVPVNASTPASTPPPLAPQEPPQPGTSAPSLE 648
|
|
| Not5 |
COG5665 |
CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription]; |
428-770 |
2.67e-03 |
|
CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription];
Pssm-ID: 444384 [Multi-domain] Cd Length: 874 Bit Score: 42.34 E-value: 2.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 428 ATYDVISSSTTSDETEIEIHTATR-------DPILDSVPPKTSRTAEQPRATLAPIEALFESRNVEIFTSPEVR------ 494
Cdd:COG5665 208 STPQAFNASATSGRSQHIVQAAKRvgvewwgDPSLLATPPATPATEEKSSQQPKSQPTSPSGGTTPPSTNQLTTsntpts 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 495 --------PTTAAPQQTTSIPSTPKRQSTPKPPRV--KPAPEPETRPSAQTTKAPRKTKKPGHhrlrRPKTTRSPEVPKS 564
Cdd:COG5665 288 takaqpqpPTKKQPAKEPPSDTASGNPSAPSVLINsdSPTSEDPATASVPTTEETTAFTTPSS----VPSTPAEKDTPAT 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 565 KPALEPATVTPEILV-PKIVPKPPQKPKATrrpevpqvkpAHEPVTFGSEAPalaivtttdiepvitrtkASVTTLAPKP 643
Cdd:COG5665 364 DLATPVSPTPPETSVdKKVSPDSATSSTKS----------EKEGGTASSPMP------------------PNIAIGAKDD 415
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 644 PRPRTHRQRTKYKTTQSPKIPHSKPADLGPITSEPPLAS--------TTKKVRRPRPKPQTTPHPEVPHTILVPATSLEP 715
Cdd:COG5665 416 VDATDPSQEAKEYTKNAPMTPEADSAPESSVRTEASPSAgsdlepenTTLRDPAPNAIPPPEDPSTIGRLSSGDKLANET 495
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 716 FIITEAPGTTLVPKLPQQ--PDYPHPKPKTT---RSPAASPTELVPTPVFEPVTPLKEDP 770
Cdd:COG5665 496 GPPVIRRDSTPSSTADQSivGVLAFGLDQRTqaeISVEAASRSNPLLNSQVKSFPLGKRS 555
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
950-1241 |
2.92e-03 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 42.21 E-value: 2.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 950 VPATVVLATALTPVTLRTKAPKTTTLAPNVQRTRRPHPRPKTTASTgvsesksvsddlelvafSTESPQKTIVPKEPLHT 1029
Cdd:pfam05109 405 ITRTATNATTTTHKVIFSKAPESTTTSPTLNTTGFAAPNTTTGLPS-----------------STHVPTNLTAPASTGPT 467
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 1030 TSKPKMpPSPEVADTTSvpKDERLSLKPDPEVTHSETVLPPVTfrvEPPKTTIAPLETRGIPLIPVISPRPSqeelQTAM 1109
Cdd:pfam05109 468 VSTADV-TSPTPAGTTS--GASPVTPSPSPRDNGTESKAPDMT---SPTSAVTTPTPNATSPTPAVTTPTPN----ATSP 537
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 1110 EETDQSTQELFTTKIPRTTELAKTTQAPHRLHTAPVRPRI-PGRPHGRPALNKTTTRPDKTKPRGTSHKNGVGtGTKQAP 1188
Cdd:pfam05109 538 TLGKTSPTSAVTTPTPNATSPTPAVTTPTPNATIPTLGKTsPTSAVTTPTPNATSPTVGETSPQANTTNHTLG-GTSSTP 616
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 568995618 1189 KPPSPGRNA-------------SVDSHATRKPGSVSGTRRPPIPHRHSSTRPVSPERRPLPPNNVT 1241
Cdd:pfam05109 617 VVTSPPKNAtsavttgqhnitsSSTSSMSLRPSSISETLSPSTSDNSTSHMPLLTSAHPTGGENIT 682
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
469-600 |
3.35e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 42.28 E-value: 3.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 469 PRATLAPIEALfESRNV----EIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVkPAPEPETRPSAQTTKAPRKTKK 544
Cdd:PRK07764 371 ERGLLARLERL-ERRLGvaggAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPA-AAPQPAPAPAPAPAPPSPAGNA 448
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 568995618 545 PGHHRLRRPKTTRSPEVPKSKPALEPATVTPEILVPKIVPKPPQKPKATRRPEVPQ 600
Cdd:PRK07764 449 PAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPA 504
|
|
| PRK14954 |
PRK14954 |
DNA polymerase III subunits gamma and tau; Provisional |
515-612 |
3.82e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 184918 [Multi-domain] Cd Length: 620 Bit Score: 41.85 E-value: 3.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 515 TPKPPRVKPAPEPETrPSAQTTKAPRKTKKPGhhrlRRPKTTRSPEvpkSKPAlePATVTPeilVPKIVPKPPqKPKATR 594
Cdd:PRK14954 385 AGSPDVKKKAPEPDL-PQPDRHPGPAKPEAPG----ARPAELPSPA---SAPT--PEQQPP---VARSAPLPP-SPQASA 450
|
90
....*....|....*...
gi 568995618 595 RPEVPQVKPAhepVTFGS 612
Cdd:PRK14954 451 PRNVASGKPG---VDLGS 465
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
531-802 |
3.96e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 42.23 E-value: 3.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 531 PSAQTTKAPRKTKKPGHHRlrrpKTTRSPEVPKSKPALEPATVTPEILVPKIVPKPPQKPKATRRPEVPqvkPAHEPVTF 610
Cdd:PHA03247 255 PAPPPVVGEGADRAPETAR----GATGPPPPPEAAAPNGAAAPPDGVWGAALAGAPLALPAPPDPPPPA---PAGDAEEE 327
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 611 GSEAPALAIVTttdiePVitrtkasvttlapkpPRPRTHRQRTKYKTTQSPKIPHSKPADLGPITSEPPLASTTKKVRRp 690
Cdd:PHA03247 328 DDEDGAMEVVS-----PL---------------PRPRQHYPLGFPKRRRPTWTPPSSLEDLSAGRHHPKRASLPTRKRR- 386
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 691 rpkpqTTPHPEVPHTiLVPATSLEPFIITEAPGTTLVPKLPQQPDYPHPKPKTTRSPAASPTELVPTPVFEPVTPLKEDP 770
Cdd:PHA03247 387 -----SARHAATPFA-RGPGGDDQTRPAAPVPASVPTPAPTPVPASAPPPPATPLPSAEPGSDDGPAPPPERQPPAPATE 460
|
250 260 270
....*....|....*....|....*....|...
gi 568995618 771 VTTivPITDLERVTDLETPVAFRT-EAPGTTLA 802
Cdd:PHA03247 461 PAP--DDPDDATRKALDALRERRPpEPPGADLA 491
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
491-673 |
4.53e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 41.79 E-value: 4.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 491 PEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQTTKAPRKTKKPGHHRLRRPKTTRSPEVPKSKPALEP 570
Cdd:PRK12323 383 AQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAAAPAAAA 462
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 571 ATVTPEIL---VPKIVPKPPQKPKATRRPEVPQVKPAHE-PVTFGSEAPA------LAIVTTTDIEPVITRTKASVTTLA 640
Cdd:PRK12323 463 RPAAAGPRpvaAAAAAAPARAAPAAAPAPADDDPPPWEElPPEFASPAPAqpdaapAGWVAESIPDPATADPDDAFETLA 542
|
170 180 190
....*....|....*....|....*....|...
gi 568995618 641 PKPPRPRTHRQRTKYKTTQSPKIPHSKPADLGP 673
Cdd:PRK12323 543 PAPAAAPAPRAAAATEPVVAPRPPRASASGLPD 575
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
471-748 |
7.08e-03 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 41.07 E-value: 7.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 471 ATLAPIEALFESrnveiftSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPEtRPSAQttkAPRKTKKPGHHRL 550
Cdd:PLN03209 311 APLTPMEELLAK-------IPSQRVPPKESDAADGPKPVPTKPVTPEAPSPPIEEEPP-QPKAV---VPRPLSPYTAYED 379
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 551 RRPKTTRSPEVPKSKPA----------LEPATVTPEILVPKIVP--KPPQKPKATRRPEVPQVK-PAHEPVTFGSEAPAL 617
Cdd:PLN03209 380 LKPPTSPIPTPPSSSPAssksvdavakPAEPDVVPSPGSASNVPevEPAQVEAKKTRPLSPYARyEDLKPPTSPSPTAPT 459
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 618 AIVTTTDIEPVITRT------KASVTTLAPKPPRPRthrqrtkykttqsPKIPHSKPADLGPITSEPPLAsttkkvrrPR 691
Cdd:PLN03209 460 GVSPSVSSTSSVPAVpdtapaTAATDAAAPPPANMR-------------PLSPYAVYDDLKPPTSPSPAA--------PV 518
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568995618 692 PKPQTTPHPEVPhtilvPATSLEPFIITEAPGTTLVPKlpQQPDYPHP-----KPKTTRSPA 748
Cdd:PLN03209 519 GKVAPSSTNEVV-----KVGNSAPPTALADEQHHAQPK--PRPLSPYTmyedlKPPTSPTPS 573
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
451-539 |
8.70e-03 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 39.60 E-value: 8.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 451 RDPIlDSVPPKTSRTAEQP--------RATLAPIEALFESRNVEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVK 522
Cdd:PRK11633 50 RDEP-DMMPAATQALPTQPpegaaeavRAGDAAAPSLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQKVEAP 128
|
90
....*....|....*..
gi 568995618 523 PAPEPETRPSAQTTKAP 539
Cdd:PRK11633 129 PAPKPEPKPVVEEKAAP 145
|
|
| COG3979 |
COG3979 |
Chitodextrinase [Carbohydrate transport and metabolism]; |
1355-1449 |
9.21e-03 |
|
Chitodextrinase [Carbohydrate transport and metabolism];
Pssm-ID: 443178 [Multi-domain] Cd Length: 369 Bit Score: 40.14 E-value: 9.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568995618 1355 PTNLTVVTVEgcPSFVILDWEK-PLNDTVTEYEVisrengsFSGKNKSIQITNQTFSTVENLKPDTSYEFQVKPKnplge 1433
Cdd:COG3979 6 PTGLTASNVT--SSSVSLSWDAsTDNVGVTGYDV-------YRGGDQVATVTGLTAWTVTGLTPGTEYTFTVGAC----- 71
|
90
....*....|....*.
gi 568995618 1434 GPASNTVAFSTESADP 1449
Cdd:COG3979 72 DAAGNVSAASGTSTAM 87
|
|
|