|
Name |
Accession |
Description |
Interval |
E-value |
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1609-1868 |
4.46e-71 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
:
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 238.71 E-value: 4.46e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 1609 SPPFEYTIMAMIALNTIVLMMKFYGAS-VAYENALRVFNIVFTSLFSLECVLKVMAFGI-LNYFRDAWNIFDFVTVLGSI 1686
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPeEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFkKRYFRSPWNILDFVVVLPSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 1687 TDILVTEFGNpnnFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIGID 1766
Cdd:pfam00520 81 ISLVLSSVGS---LSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKT 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 1767 GEDedsdedefQITEHNNFRTFFQALMLLFRSATGEAWHNIMLSCLSGKpcdknsgiltadcGNEFAYFYFVSFIFLCSF 1846
Cdd:pfam00520 158 WEN--------PDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGK-------------GEFWAYIYFVSFIILGGF 216
|
250 260
....*....|....*....|..
gi 568955967 1847 LMLNLFVAVIMDNFEYLTRDSS 1868
Cdd:pfam00520 217 LLLNLFIAVIIDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
188-462 |
5.96e-68 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
:
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 229.46 E-value: 5.96e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 188 WPPFEYMILATIIANCIVLALEQHLPDDDKTPmsERLDDTEPYFIGIFCFEAGIKIVALGFAFHkgsYLRNGWNVMDFVV 267
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEEPLT--TVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVV 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 268 VLTGILATVGTE----FDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILIFAIIGLEFYMGKF 343
Cdd:pfam00520 76 VLPSLISLVLSSvgslSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 344 HTtcfeegtddiqgespapcgteepartcpngtkcqpyWEGPNNGITQFDNILFAVLTVFQCITMEGWTDLLYNSNDASG 423
Cdd:pfam00520 156 KT------------------------------------WENPDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKG 199
|
250 260 270
....*....|....*....|....*....|....*....
gi 568955967 424 NTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVE 462
Cdd:pfam00520 200 EFWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
578-816 |
7.01e-57 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
:
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 197.87 E-value: 7.01e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 578 QAFYWTVLSLVALNTLCVAIVHYNQPEW-LSDFLYYAEFIFLGLFMSEMFIKMYGLG-TRPYFHSSFNCFDCGVIIGSIF 655
Cdd:pfam00520 2 RYFELFILLLILLNTIFLALETYFQPEEpLTTVLEILDYVFTGIFTLEMLLKIIAAGfKKRYFRSPWNILDFVVVLPSLI 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 656 EVIWAVIKPGtsFGISVLRALRLLRIFKVTKYWASLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFDE 735
Cdd:pfam00520 82 SLVLSSVGSL--SGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKTWE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 736 G--TPPTNFDTFPAAIMTVFQILTGEDWNEVMYDGIKSqggvQGGMVFSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQE 813
Cdd:pfam00520 160 NpdNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDG----KGEFWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTE 235
|
...
gi 568955967 814 LTK 816
Cdd:pfam00520 236 RTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1284-1519 |
4.69e-56 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
:
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 195.56 E-value: 4.69e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 1284 RYFEMCILMVIAMSSIALAAEDPVQPNAPRNNVLRYFDYVFTGVFTFEMVIKMIDLGLVLHqgaYFRDLWNILDFIVVSG 1363
Cdd:pfam00520 2 RYFELFILLLILLNTIFLALETYFQPEEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVVVLP 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 1364 ALVAFAFTSSTRGNSkgkdintIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIVYMLFMFIFAVVAVQLF 1443
Cdd:pfam00520 79 SLISLVLSSVGSLSG-------LRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLF 151
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 568955967 1444 KGKFfhctdeskeferdcrgkyllyeKNEVKARDREWkkyefHYDNVLWALLTLFTVSTGEGWPQVLKHSVDATFE 1519
Cdd:pfam00520 152 GGKL----------------------KTWENPDNGRT-----NFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKGE 200
|
|
| Ca_chan_IQ |
pfam08763 |
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular ... |
1940-2017 |
8.35e-35 |
|
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular calcium entry in response to changes in membrane potential. The isoleucine-glutamine (IQ) motif in the voltage gated calcium channel IQ domain interacts with hydrophobic pockets of Ca2+/calmodulin. The interaction regulates two self-regulatory calcium dependent feedback mechanism, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF).
:
Pssm-ID: 462591 Cd Length: 77 Bit Score: 128.48 E-value: 8.35e-35
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568955967 1940 NSTLMALIRTALDIKIAKGGaDKQQMDAELRKEMMAIWPNLSQKTLDLLVTPHKSTDLTVGKIYAAMMIMEYYRQSKA 2017
Cdd:pfam08763 1 TATLFALIRTSLKIKLAPAG-EMDQADAELRKIIKKIWPRLSQKTLDLLVPPPSDDEMTVGKIYAALLIQDYYRQNKA 77
|
|
| GPHH |
pfam16905 |
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in ... |
1877-1930 |
8.65e-30 |
|
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in this short domain on voltage-dependent L-type calcium channel proteins in eukaryotes. The domain is closely associated with the IQ-domain, pfam08763.
:
Pssm-ID: 465306 Cd Length: 54 Bit Score: 113.13 E-value: 8.65e-30
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 568955967 1877 EYVRVWAEYDPAACGRIHYKDMYSLLRVISPPLGLGKKCPHRVACKRLLRMDLP 1930
Cdd:pfam16905 1 EFVRVWAEYDPAATGRISYQDMYELLRRISPPLGFGKKCPARVAYKRLVRMNMP 54
|
|
| PHA03307 super family |
cl33723 |
transcriptional regulator ICP4; Provisional |
2045-2459 |
2.00e-10 |
|
transcriptional regulator ICP4; Provisional
The actual alignment was detected with superfamily member PHA03307:
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 66.73 E-value: 2.00e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2045 EGGPSQNALPSTQLDPGGGLMAHEGGMKESPSWVtqrAQEMFQKTGTWSPERGPPIDMPNSQPNSQSVEMREMGTDGYSd 2124
Cdd:PHA03307 16 EGGEFFPRPPATPGDAADDLLSGSQGQLVSDSAE---LAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWS- 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2125 sehylpmEGQTRAASMPRLPAENQRRRGRPRGNDlSTISDTSPMKRSASVLGPKARRldDYSLERVPPEENQRYH-QRRR 2203
Cdd:PHA03307 92 -------LSTLAPASPAREGSPTPPGPSSPDPPP-PTPPPASPPPSPAPDLSEMLRP--VGSPGPPPAASPPAAGaSPAA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2204 DRGHRTSERSLGRYTDVDtglgtdlSMTTQSGDLPSKDR--DQDRGRPKDRkhrphhhhHHHHHHPPAPDRDRYAQERPD 2281
Cdd:PHA03307 162 VASDAASSRQAALPLSSP-------EETARAPSSPPAEPppSTPPAAASPR--------PPRRSSPISASASSPAPAPGR 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2282 TGRARAREQRWSRSPSEGREhtthrQGSSSVSGSPAPSTSGTSTPRRGRRQLPQTPCTPRPLVSYSPAPRRPaarrmAGP 2361
Cdd:PHA03307 227 SAADDAGASSSDSSSSESSG-----CGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRE-----RSP 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2362 AAPPGGSPRGCRRAPRWPAHAPEGPRPRGADYTEPDSPRE-----PPGGAHDPAPRSPRTPRAAGCASPR---HGRRLPN 2433
Cdd:PHA03307 297 SPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSrgaavSPGPSPSRSPSPSRPPPPADPSSPRkrpRPSRAPS 376
|
410 420
....*....|....*....|....*.
gi 568955967 2434 GYYAGHGAPRPRTARRGAHDAYSESE 2459
Cdd:PHA03307 377 SPAASAGRPTRRRARAAVAGRARRRD 402
|
|
| PHA03247 super family |
cl33720 |
large tegument protein UL36; Provisional |
894-1276 |
5.08e-05 |
|
large tegument protein UL36; Provisional
The actual alignment was detected with superfamily member PHA03247:
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 49.17 E-value: 5.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 894 PTPYARPLRPDVKTHLDRPlVVDPQENR-------NNNTNKSRAPEALRP-TARPRESARDPDARRAWPGSPERAPGREG 965
Cdd:PHA03247 2571 PRPAPRPSEPAVTSRARRP-DAPPQSARprapvddRGDPRGPAPPSPLPPdTHAPDPPPPSPSPAANEPDPHPPPTVPPP 2649
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 966 PYGRESEPQQREHAPPREHAPWDAdterAKAGDAPRRHTHR---------------PVAEGEPRRHRARRRPGDEPDDRP 1030
Cdd:PHA03247 2650 ERPRDDPAPGRVSRPRRARRLGRA----AQASSPPQRPRRRaarptvgsltsladpPPPPPTPEPAPHALVSATPLPPGP 2725
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 1031 ERRPRPRDATR-----PARAADGEGDDGERKRRHRH---GPPAHDDrerrhrrrkenqgSGVPVSGPNLSTTRPIQQDLG 1102
Cdd:PHA03247 2726 AAARQASPALPaapapPAVPAGPATPGGPARPARPPttaGPPAPAP-------------PAAPAAGPPRRLTRPAVASLS 2792
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 1103 --RQDLPLAEDLDNMKNNKL------------ATGEP----ASPHDSLGHSGLPPSPAKIGNSTNPG------------- 1151
Cdd:PHA03247 2793 esRESLPSPWDPADPPAAVLapaaalppaaspAGPLPpptsAQPTAPPPPPGPPPPSLPLGGSVAPGgdvrrrppsrspa 2872
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 1152 --PALATNP------QNAASRRTPNNPGNPSNPGPPKTPenslivtnPSSTQPNSAKTARKPEHMAVEIPPacPPLNHTV 1223
Cdd:PHA03247 2873 akPAAPARPpvrrlaRPAVSRSTESFALPPDQPERPPQP--------QAPPPPQPQPQPPPPPQPQPPPPP--PPRPQPP 2942
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 568955967 1224 VQVNKNANPDPLPKKEEEKKEEEEADPGEDG------PKPMPPYSSMfiLSTTNPLRRL 1276
Cdd:PHA03247 2943 LAPTTDPAGAGEPSGAVPQPWLGALVPGRVAvprfrvPQPAPSREAP--ASSTPPLTGH 2999
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1609-1868 |
4.46e-71 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 238.71 E-value: 4.46e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 1609 SPPFEYTIMAMIALNTIVLMMKFYGAS-VAYENALRVFNIVFTSLFSLECVLKVMAFGI-LNYFRDAWNIFDFVTVLGSI 1686
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPeEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFkKRYFRSPWNILDFVVVLPSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 1687 TDILVTEFGNpnnFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIGID 1766
Cdd:pfam00520 81 ISLVLSSVGS---LSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKT 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 1767 GEDedsdedefQITEHNNFRTFFQALMLLFRSATGEAWHNIMLSCLSGKpcdknsgiltadcGNEFAYFYFVSFIFLCSF 1846
Cdd:pfam00520 158 WEN--------PDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGK-------------GEFWAYIYFVSFIILGGF 216
|
250 260
....*....|....*....|..
gi 568955967 1847 LMLNLFVAVIMDNFEYLTRDSS 1868
Cdd:pfam00520 217 LLLNLFIAVIIDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
188-462 |
5.96e-68 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 229.46 E-value: 5.96e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 188 WPPFEYMILATIIANCIVLALEQHLPDDDKTPmsERLDDTEPYFIGIFCFEAGIKIVALGFAFHkgsYLRNGWNVMDFVV 267
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEEPLT--TVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVV 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 268 VLTGILATVGTE----FDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILIFAIIGLEFYMGKF 343
Cdd:pfam00520 76 VLPSLISLVLSSvgslSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 344 HTtcfeegtddiqgespapcgteepartcpngtkcqpyWEGPNNGITQFDNILFAVLTVFQCITMEGWTDLLYNSNDASG 423
Cdd:pfam00520 156 KT------------------------------------WENPDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKG 199
|
250 260 270
....*....|....*....|....*....|....*....
gi 568955967 424 NTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVE 462
Cdd:pfam00520 200 EFWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
578-816 |
7.01e-57 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 197.87 E-value: 7.01e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 578 QAFYWTVLSLVALNTLCVAIVHYNQPEW-LSDFLYYAEFIFLGLFMSEMFIKMYGLG-TRPYFHSSFNCFDCGVIIGSIF 655
Cdd:pfam00520 2 RYFELFILLLILLNTIFLALETYFQPEEpLTTVLEILDYVFTGIFTLEMLLKIIAAGfKKRYFRSPWNILDFVVVLPSLI 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 656 EVIWAVIKPGtsFGISVLRALRLLRIFKVTKYWASLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFDE 735
Cdd:pfam00520 82 SLVLSSVGSL--SGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKTWE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 736 G--TPPTNFDTFPAAIMTVFQILTGEDWNEVMYDGIKSqggvQGGMVFSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQE 813
Cdd:pfam00520 160 NpdNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDG----KGEFWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTE 235
|
...
gi 568955967 814 LTK 816
Cdd:pfam00520 236 RTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1284-1519 |
4.69e-56 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 195.56 E-value: 4.69e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 1284 RYFEMCILMVIAMSSIALAAEDPVQPNAPRNNVLRYFDYVFTGVFTFEMVIKMIDLGLVLHqgaYFRDLWNILDFIVVSG 1363
Cdd:pfam00520 2 RYFELFILLLILLNTIFLALETYFQPEEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVVVLP 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 1364 ALVAFAFTSSTRGNSkgkdintIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIVYMLFMFIFAVVAVQLF 1443
Cdd:pfam00520 79 SLISLVLSSVGSLSG-------LRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLF 151
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 568955967 1444 KGKFfhctdeskeferdcrgkyllyeKNEVKARDREWkkyefHYDNVLWALLTLFTVSTGEGWPQVLKHSVDATFE 1519
Cdd:pfam00520 152 GGKL----------------------KTWENPDNGRT-----NFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKGE 200
|
|
| Ca_chan_IQ |
pfam08763 |
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular ... |
1940-2017 |
8.35e-35 |
|
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular calcium entry in response to changes in membrane potential. The isoleucine-glutamine (IQ) motif in the voltage gated calcium channel IQ domain interacts with hydrophobic pockets of Ca2+/calmodulin. The interaction regulates two self-regulatory calcium dependent feedback mechanism, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF).
Pssm-ID: 462591 Cd Length: 77 Bit Score: 128.48 E-value: 8.35e-35
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568955967 1940 NSTLMALIRTALDIKIAKGGaDKQQMDAELRKEMMAIWPNLSQKTLDLLVTPHKSTDLTVGKIYAAMMIMEYYRQSKA 2017
Cdd:pfam08763 1 TATLFALIRTSLKIKLAPAG-EMDQADAELRKIIKKIWPRLSQKTLDLLVPPPSDDEMTVGKIYAALLIQDYYRQNKA 77
|
|
| GPHH |
pfam16905 |
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in ... |
1877-1930 |
8.65e-30 |
|
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in this short domain on voltage-dependent L-type calcium channel proteins in eukaryotes. The domain is closely associated with the IQ-domain, pfam08763.
Pssm-ID: 465306 Cd Length: 54 Bit Score: 113.13 E-value: 8.65e-30
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 568955967 1877 EYVRVWAEYDPAACGRIHYKDMYSLLRVISPPLGLGKKCPHRVACKRLLRMDLP 1930
Cdd:pfam16905 1 EFVRVWAEYDPAATGRISYQDMYELLRRISPPLGFGKKCPARVAYKRLVRMNMP 54
|
|
| Ca_chan_IQ |
smart01062 |
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular ... |
1995-2025 |
9.97e-11 |
|
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular calcium entry in response to changes in membrane potential. The isoleucine-glutamine (IQ) motif in the voltage gated calcium channel IQ domain interacts with hydrophobic pockets of Ca2+/calmodulin. The interaction regulates two self-regulatory calcium dependent feedback mechanism, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF).
Pssm-ID: 198130 Cd Length: 31 Bit Score: 58.39 E-value: 9.97e-11
10 20 30
....*....|....*....|....*....|.
gi 568955967 1995 TDLTVGKIYAAMMIMEYYRQSKAKKLQAMRE 2025
Cdd:smart01062 1 DELTVGKIYAAMLIQDYFRQFKSRKEQELLG 31
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2045-2459 |
2.00e-10 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 66.73 E-value: 2.00e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2045 EGGPSQNALPSTQLDPGGGLMAHEGGMKESPSWVtqrAQEMFQKTGTWSPERGPPIDMPNSQPNSQSVEMREMGTDGYSd 2124
Cdd:PHA03307 16 EGGEFFPRPPATPGDAADDLLSGSQGQLVSDSAE---LAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWS- 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2125 sehylpmEGQTRAASMPRLPAENQRRRGRPRGNDlSTISDTSPMKRSASVLGPKARRldDYSLERVPPEENQRYH-QRRR 2203
Cdd:PHA03307 92 -------LSTLAPASPAREGSPTPPGPSSPDPPP-PTPPPASPPPSPAPDLSEMLRP--VGSPGPPPAASPPAAGaSPAA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2204 DRGHRTSERSLGRYTDVDtglgtdlSMTTQSGDLPSKDR--DQDRGRPKDRkhrphhhhHHHHHHPPAPDRDRYAQERPD 2281
Cdd:PHA03307 162 VASDAASSRQAALPLSSP-------EETARAPSSPPAEPppSTPPAAASPR--------PPRRSSPISASASSPAPAPGR 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2282 TGRARAREQRWSRSPSEGREhtthrQGSSSVSGSPAPSTSGTSTPRRGRRQLPQTPCTPRPLVSYSPAPRRPaarrmAGP 2361
Cdd:PHA03307 227 SAADDAGASSSDSSSSESSG-----CGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRE-----RSP 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2362 AAPPGGSPRGCRRAPRWPAHAPEGPRPRGADYTEPDSPRE-----PPGGAHDPAPRSPRTPRAAGCASPR---HGRRLPN 2433
Cdd:PHA03307 297 SPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSrgaavSPGPSPSRSPSPSRPPPPADPSSPRkrpRPSRAPS 376
|
410 420
....*....|....*....|....*.
gi 568955967 2434 GYYAGHGAPRPRTARRGAHDAYSESE 2459
Cdd:PHA03307 377 SPAASAGRPTRRRARAAVAGRARRRD 402
|
|
| PBP1 |
COG5180 |
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification]; ... |
2035-2451 |
3.18e-07 |
|
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification];
Pssm-ID: 444064 [Multi-domain] Cd Length: 548 Bit Score: 55.84 E-value: 3.18e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2035 QRMEPPSPTQEGG-PSQNALPSTQLDPGGGLMAHEGGMKESPSWV------TQRAQEMFQKTGTWSPERGPPidmpnSQP 2107
Cdd:COG5180 14 TVPIPPNAARPVLsPELWAAANNDAVSQGDRSALASSPTRPYARKifepldIKLALGKPQLPSVAEPEAYLD-----PAP 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2108 NSQSVEMREMGTDGYSDSehylpMEGQTRAASMPRLPAENQRRRGRPRgnDLSTISDTSPMKRSASVlgpkaRRLDDYSL 2187
Cdd:COG5180 89 PKSSPDTPEEQLGAPAGD-----LLVLPAAKTPELAAGALPAPAAAAA--LPKAKVTREATSASAGV-----ALAAALLQ 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2188 ERVPPEEnqryhQRRRDRGHRTSERSLGRYTDVDTG-LGTDLSMTTQSGDLPSKDRDQDRGRPKDrkhRPHHHHHHHHHH 2266
Cdd:COG5180 157 RSDPILA-----KDPDGDSASTLPPPAEKLDKVLTEpRDALKDSPEKLDRPKVEVKDEAQEEPPD---LTGGADHPRPEA 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2267 PPAPDRDRYAQERPDTGRARAREQRWSRSPSEGREhtthrqgSSSVSGSPAPSTSGTSTPRRGRRQLPQTPCTPRPLVSY 2346
Cdd:COG5180 229 ASSPKVDPPSTSEARSRPATVDAQPEMRPPADAKE-------RRRAAIGDTPAAEPPGLPVLEAGSEPQSDAPEAETARP 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2347 SPAPRRPAARRMAGPAAPPGGSPRGCRRAPRWPAHAPEGPRPRGADYTEPDSPREPPGGAHDPAPRSPRTPRAA------ 2420
Cdd:COG5180 302 IDVKGVASAPPATRPVRPPGGARDPGTPRPGQPTERPAGVPEAASDAGQPPSAYPPAEEAVPGKPLEQGAPRPGssggdg 381
|
410 420 430
....*....|....*....|....*....|....*...
gi 568955967 2421 -------GCASPRHGRRLPNGYYAGHGAPRPRTARRGA 2451
Cdd:COG5180 382 apfqppnGAPQPGLGRRGAPGPPMGAGDLVQAALDGGG 419
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
894-1276 |
5.08e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 49.17 E-value: 5.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 894 PTPYARPLRPDVKTHLDRPlVVDPQENR-------NNNTNKSRAPEALRP-TARPRESARDPDARRAWPGSPERAPGREG 965
Cdd:PHA03247 2571 PRPAPRPSEPAVTSRARRP-DAPPQSARprapvddRGDPRGPAPPSPLPPdTHAPDPPPPSPSPAANEPDPHPPPTVPPP 2649
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 966 PYGRESEPQQREHAPPREHAPWDAdterAKAGDAPRRHTHR---------------PVAEGEPRRHRARRRPGDEPDDRP 1030
Cdd:PHA03247 2650 ERPRDDPAPGRVSRPRRARRLGRA----AQASSPPQRPRRRaarptvgsltsladpPPPPPTPEPAPHALVSATPLPPGP 2725
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 1031 ERRPRPRDATR-----PARAADGEGDDGERKRRHRH---GPPAHDDrerrhrrrkenqgSGVPVSGPNLSTTRPIQQDLG 1102
Cdd:PHA03247 2726 AAARQASPALPaapapPAVPAGPATPGGPARPARPPttaGPPAPAP-------------PAAPAAGPPRRLTRPAVASLS 2792
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 1103 --RQDLPLAEDLDNMKNNKL------------ATGEP----ASPHDSLGHSGLPPSPAKIGNSTNPG------------- 1151
Cdd:PHA03247 2793 esRESLPSPWDPADPPAAVLapaaalppaaspAGPLPpptsAQPTAPPPPPGPPPPSLPLGGSVAPGgdvrrrppsrspa 2872
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 1152 --PALATNP------QNAASRRTPNNPGNPSNPGPPKTPenslivtnPSSTQPNSAKTARKPEHMAVEIPPacPPLNHTV 1223
Cdd:PHA03247 2873 akPAAPARPpvrrlaRPAVSRSTESFALPPDQPERPPQP--------QAPPPPQPQPQPPPPPQPQPPPPP--PPRPQPP 2942
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 568955967 1224 VQVNKNANPDPLPKKEEEKKEEEEADPGEDG------PKPMPPYSSMfiLSTTNPLRRL 1276
Cdd:PHA03247 2943 LAPTTDPAGAGEPSGAVPQPWLGALVPGRVAvprfrvPQPAPSREAP--ASSTPPLTGH 2999
|
|
| Pro-rich |
pfam15240 |
Proline-rich protein; This family includes several eukaryotic proline-rich proteins. |
2295-2444 |
8.44e-05 |
|
Proline-rich protein; This family includes several eukaryotic proline-rich proteins.
Pssm-ID: 464580 [Multi-domain] Cd Length: 167 Bit Score: 45.41 E-value: 8.44e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2295 SPSEGREHTTHRQGSSSVSGSPAPSTSGTSTPRRGrrqlPQTPCTPRPLVSyspaprrpaarrMAGPAAPPGGSPRGcrR 2374
Cdd:pfam15240 15 SAQSSSEDVSQEDSPSLISEEEGQSQQGGQGPQGP----PPGGFPPQPPAS------------DDPPGPPPPGGPQQ--P 76
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2375 APRWPAHAPEGPRPRGADYTEPDSPREPPGGAHDPAPRSPRTPRAAGcaSPRHGRRLPNGYYAGHGAPRP 2444
Cdd:pfam15240 77 PPQGGKQKPQGPPPQGGPRPPPGKPQGPPPQGGNQQQGPPPPGKPQG--PPPQGGGPPPQGGNQQGPPPP 144
|
|
| PLN03223 |
PLN03223 |
Polycystin cation channel protein; Provisional |
720-813 |
9.51e-03 |
|
Polycystin cation channel protein; Provisional
Pssm-ID: 215637 [Multi-domain] Cd Length: 1634 Bit Score: 41.47 E-value: 9.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 720 ALLGMQLFGGQFnfdegtppTNFDTFPAAIMTVFQILTGeDWNEVMYDgIKSQGGVQGgMVFSIYFIVLTLFGNYTLLNV 799
Cdd:PLN03223 1345 AFIGHVIFGNAS--------VHFSDMTDSINSLFENLLG-DITYFNED-LKNLTGLQF-VVGMIYFYSYNIFVFMILFNF 1413
|
90
....*....|....*...
gi 568955967 800 FLAIAVDNL----ANAQE 813
Cdd:PLN03223 1414 LLAIICDAFgevkANAAE 1431
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1609-1868 |
4.46e-71 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 238.71 E-value: 4.46e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 1609 SPPFEYTIMAMIALNTIVLMMKFYGAS-VAYENALRVFNIVFTSLFSLECVLKVMAFGI-LNYFRDAWNIFDFVTVLGSI 1686
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPeEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFkKRYFRSPWNILDFVVVLPSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 1687 TDILVTEFGNpnnFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIGID 1766
Cdd:pfam00520 81 ISLVLSSVGS---LSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKT 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 1767 GEDedsdedefQITEHNNFRTFFQALMLLFRSATGEAWHNIMLSCLSGKpcdknsgiltadcGNEFAYFYFVSFIFLCSF 1846
Cdd:pfam00520 158 WEN--------PDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGK-------------GEFWAYIYFVSFIILGGF 216
|
250 260
....*....|....*....|..
gi 568955967 1847 LMLNLFVAVIMDNFEYLTRDSS 1868
Cdd:pfam00520 217 LLLNLFIAVIIDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
188-462 |
5.96e-68 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 229.46 E-value: 5.96e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 188 WPPFEYMILATIIANCIVLALEQHLPDDDKTPmsERLDDTEPYFIGIFCFEAGIKIVALGFAFHkgsYLRNGWNVMDFVV 267
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEEPLT--TVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVV 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 268 VLTGILATVGTE----FDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILIFAIIGLEFYMGKF 343
Cdd:pfam00520 76 VLPSLISLVLSSvgslSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 344 HTtcfeegtddiqgespapcgteepartcpngtkcqpyWEGPNNGITQFDNILFAVLTVFQCITMEGWTDLLYNSNDASG 423
Cdd:pfam00520 156 KT------------------------------------WENPDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKG 199
|
250 260 270
....*....|....*....|....*....|....*....
gi 568955967 424 NTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVE 462
Cdd:pfam00520 200 EFWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
578-816 |
7.01e-57 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 197.87 E-value: 7.01e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 578 QAFYWTVLSLVALNTLCVAIVHYNQPEW-LSDFLYYAEFIFLGLFMSEMFIKMYGLG-TRPYFHSSFNCFDCGVIIGSIF 655
Cdd:pfam00520 2 RYFELFILLLILLNTIFLALETYFQPEEpLTTVLEILDYVFTGIFTLEMLLKIIAAGfKKRYFRSPWNILDFVVVLPSLI 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 656 EVIWAVIKPGtsFGISVLRALRLLRIFKVTKYWASLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFDE 735
Cdd:pfam00520 82 SLVLSSVGSL--SGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKTWE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 736 G--TPPTNFDTFPAAIMTVFQILTGEDWNEVMYDGIKSqggvQGGMVFSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQE 813
Cdd:pfam00520 160 NpdNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDG----KGEFWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTE 235
|
...
gi 568955967 814 LTK 816
Cdd:pfam00520 236 RTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1284-1519 |
4.69e-56 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 195.56 E-value: 4.69e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 1284 RYFEMCILMVIAMSSIALAAEDPVQPNAPRNNVLRYFDYVFTGVFTFEMVIKMIDLGLVLHqgaYFRDLWNILDFIVVSG 1363
Cdd:pfam00520 2 RYFELFILLLILLNTIFLALETYFQPEEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVVVLP 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 1364 ALVAFAFTSSTRGNSkgkdintIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIVYMLFMFIFAVVAVQLF 1443
Cdd:pfam00520 79 SLISLVLSSVGSLSG-------LRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLF 151
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 568955967 1444 KGKFfhctdeskeferdcrgkyllyeKNEVKARDREWkkyefHYDNVLWALLTLFTVSTGEGWPQVLKHSVDATFE 1519
Cdd:pfam00520 152 GGKL----------------------KTWENPDNGRT-----NFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKGE 200
|
|
| Ca_chan_IQ |
pfam08763 |
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular ... |
1940-2017 |
8.35e-35 |
|
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular calcium entry in response to changes in membrane potential. The isoleucine-glutamine (IQ) motif in the voltage gated calcium channel IQ domain interacts with hydrophobic pockets of Ca2+/calmodulin. The interaction regulates two self-regulatory calcium dependent feedback mechanism, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF).
Pssm-ID: 462591 Cd Length: 77 Bit Score: 128.48 E-value: 8.35e-35
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568955967 1940 NSTLMALIRTALDIKIAKGGaDKQQMDAELRKEMMAIWPNLSQKTLDLLVTPHKSTDLTVGKIYAAMMIMEYYRQSKA 2017
Cdd:pfam08763 1 TATLFALIRTSLKIKLAPAG-EMDQADAELRKIIKKIWPRLSQKTLDLLVPPPSDDEMTVGKIYAALLIQDYYRQNKA 77
|
|
| GPHH |
pfam16905 |
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in ... |
1877-1930 |
8.65e-30 |
|
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in this short domain on voltage-dependent L-type calcium channel proteins in eukaryotes. The domain is closely associated with the IQ-domain, pfam08763.
Pssm-ID: 465306 Cd Length: 54 Bit Score: 113.13 E-value: 8.65e-30
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 568955967 1877 EYVRVWAEYDPAACGRIHYKDMYSLLRVISPPLGLGKKCPHRVACKRLLRMDLP 1930
Cdd:pfam16905 1 EFVRVWAEYDPAATGRISYQDMYELLRRISPPLGFGKKCPARVAYKRLVRMNMP 54
|
|
| PKD_channel |
pfam08016 |
Polycystin cation channel; This family contains the cation channel region from group II of ... |
1648-1861 |
8.32e-11 |
|
Polycystin cation channel; This family contains the cation channel region from group II of Transient receptor potential (TRP) channels, the TRPP subfamily, including PKD1, PKD2, PKD2L and mucolipin proteins.
Pssm-ID: 462341 [Multi-domain] Cd Length: 225 Bit Score: 64.22 E-value: 8.32e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 1648 VFTSLFSLECVLKVMAFGiLNYFRDAWNIFDFVTVLGS------------ITDILVTEF-GNPNNFIN------------ 1702
Cdd:pfam08016 19 VFFLYFVVEEILKIRKHR-PSYLRSVWNLLDLAIVILSvvlivlniyrdfLADRLIKSVeASPVTFIDfdrvaqldnlyr 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 1703 --LSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNigidgededsdedefqit 1780
Cdd:pfam08016 98 iiLAFLVFLTWLKLFKVLRFNKTMSLFTKTLSRAWKDLAGFALMFVIFFFAYAQFGYLLFGT------------------ 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 1781 EHNNFRTFFQALMLLFRSATG-EAWHNImlsclsgKPCDKNSGILtadcgnefayfYFVSFIFLCSFLMLNLFVAVIMDN 1859
Cdd:pfam08016 160 QAPNFSNFVKSILTLFRTILGdFGYNEI-------FSGNRVLGPL-----------LFLTFVFLVIFILLNLFLAIINDS 221
|
..
gi 568955967 1860 FE 1861
Cdd:pfam08016 222 YV 223
|
|
| Ca_chan_IQ |
smart01062 |
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular ... |
1995-2025 |
9.97e-11 |
|
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular calcium entry in response to changes in membrane potential. The isoleucine-glutamine (IQ) motif in the voltage gated calcium channel IQ domain interacts with hydrophobic pockets of Ca2+/calmodulin. The interaction regulates two self-regulatory calcium dependent feedback mechanism, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF).
Pssm-ID: 198130 Cd Length: 31 Bit Score: 58.39 E-value: 9.97e-11
10 20 30
....*....|....*....|....*....|.
gi 568955967 1995 TDLTVGKIYAAMMIMEYYRQSKAKKLQAMRE 2025
Cdd:smart01062 1 DELTVGKIYAAMLIQDYFRQFKSRKEQELLG 31
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2045-2459 |
2.00e-10 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 66.73 E-value: 2.00e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2045 EGGPSQNALPSTQLDPGGGLMAHEGGMKESPSWVtqrAQEMFQKTGTWSPERGPPIDMPNSQPNSQSVEMREMGTDGYSd 2124
Cdd:PHA03307 16 EGGEFFPRPPATPGDAADDLLSGSQGQLVSDSAE---LAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWS- 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2125 sehylpmEGQTRAASMPRLPAENQRRRGRPRGNDlSTISDTSPMKRSASVLGPKARRldDYSLERVPPEENQRYH-QRRR 2203
Cdd:PHA03307 92 -------LSTLAPASPAREGSPTPPGPSSPDPPP-PTPPPASPPPSPAPDLSEMLRP--VGSPGPPPAASPPAAGaSPAA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2204 DRGHRTSERSLGRYTDVDtglgtdlSMTTQSGDLPSKDR--DQDRGRPKDRkhrphhhhHHHHHHPPAPDRDRYAQERPD 2281
Cdd:PHA03307 162 VASDAASSRQAALPLSSP-------EETARAPSSPPAEPppSTPPAAASPR--------PPRRSSPISASASSPAPAPGR 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2282 TGRARAREQRWSRSPSEGREhtthrQGSSSVSGSPAPSTSGTSTPRRGRRQLPQTPCTPRPLVSYSPAPRRPaarrmAGP 2361
Cdd:PHA03307 227 SAADDAGASSSDSSSSESSG-----CGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRE-----RSP 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2362 AAPPGGSPRGCRRAPRWPAHAPEGPRPRGADYTEPDSPRE-----PPGGAHDPAPRSPRTPRAAGCASPR---HGRRLPN 2433
Cdd:PHA03307 297 SPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSrgaavSPGPSPSRSPSPSRPPPPADPSSPRkrpRPSRAPS 376
|
410 420
....*....|....*....|....*.
gi 568955967 2434 GYYAGHGAPRPRTARRGAHDAYSESE 2459
Cdd:PHA03307 377 SPAASAGRPTRRRARAAVAGRARRRD 402
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2040-2444 |
3.88e-08 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 59.03 E-value: 3.88e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2040 PSPTQEGGPSQNALPSTQLDPGGGLMAHEGGMKESPSW------VTQRAQEMFQKTGTWSPERGPP-IDMPNSQPNSQSV 2112
Cdd:PHA03307 53 VTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWslstlaPASPAREGSPTPPGPSSPDPPPpTPPPASPPPSPAP 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2113 EMREMGTDGYSDSEhylPMEGQTRAASMPRLPAENQRRRGRPRGNDLSTISDTSPMKRSASV-LGPKARRLDDYSLERVP 2191
Cdd:PHA03307 133 DLSEMLRPVGSPGP---PPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAePPPSTPPAAASPRPPRR 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2192 PEENQRYHQRRRDRGHRTSERSLGRYTDVDT---GLGTDLSMTTQSGDlPSKDRDQDRGRPKDRKHRPHHHHHHHHHHPP 2268
Cdd:PHA03307 210 SSPISASASSPAPAPGRSAADDAGASSSDSSsseSSGCGWGPENECPL-PRPAPITLPTRIWEASGWNGPSSRPGPASSS 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2269 APDRDRYAQERPDTGRARAREQRWSRSPSEGREHTThrQGSSSVSGSPAPSTSGTSTPRRGRRqlPQTPCTPRPlvsysp 2348
Cdd:PHA03307 289 SSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRES--SSSSTSSSSESSRGAAVSPGPSPSR--SPSPSRPPP------ 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2349 aprrpaarrmAGPAAPPGGSPRGCRRAPRWPAHAPEGPRPR-GADYTEPDSPREPPGGAhdPAPRSPRTPRAAGCASPRH 2427
Cdd:PHA03307 359 ----------PADPSSPRKRPRPSRAPSSPAASAGRPTRRRaRAAVAGRARRRDATGRF--PAGRPRPSPLDAGAASGAF 426
|
410 420
....*....|....*....|
gi 568955967 2428 GRRLPNGYYAGH---GAPRP 2444
Cdd:PHA03307 427 YARYPLLTPSGEpwpGSPPP 446
|
|
| PBP1 |
COG5180 |
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification]; ... |
2035-2451 |
3.18e-07 |
|
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification];
Pssm-ID: 444064 [Multi-domain] Cd Length: 548 Bit Score: 55.84 E-value: 3.18e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2035 QRMEPPSPTQEGG-PSQNALPSTQLDPGGGLMAHEGGMKESPSWV------TQRAQEMFQKTGTWSPERGPPidmpnSQP 2107
Cdd:COG5180 14 TVPIPPNAARPVLsPELWAAANNDAVSQGDRSALASSPTRPYARKifepldIKLALGKPQLPSVAEPEAYLD-----PAP 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2108 NSQSVEMREMGTDGYSDSehylpMEGQTRAASMPRLPAENQRRRGRPRgnDLSTISDTSPMKRSASVlgpkaRRLDDYSL 2187
Cdd:COG5180 89 PKSSPDTPEEQLGAPAGD-----LLVLPAAKTPELAAGALPAPAAAAA--LPKAKVTREATSASAGV-----ALAAALLQ 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2188 ERVPPEEnqryhQRRRDRGHRTSERSLGRYTDVDTG-LGTDLSMTTQSGDLPSKDRDQDRGRPKDrkhRPHHHHHHHHHH 2266
Cdd:COG5180 157 RSDPILA-----KDPDGDSASTLPPPAEKLDKVLTEpRDALKDSPEKLDRPKVEVKDEAQEEPPD---LTGGADHPRPEA 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2267 PPAPDRDRYAQERPDTGRARAREQRWSRSPSEGREhtthrqgSSSVSGSPAPSTSGTSTPRRGRRQLPQTPCTPRPLVSY 2346
Cdd:COG5180 229 ASSPKVDPPSTSEARSRPATVDAQPEMRPPADAKE-------RRRAAIGDTPAAEPPGLPVLEAGSEPQSDAPEAETARP 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2347 SPAPRRPAARRMAGPAAPPGGSPRGCRRAPRWPAHAPEGPRPRGADYTEPDSPREPPGGAHDPAPRSPRTPRAA------ 2420
Cdd:COG5180 302 IDVKGVASAPPATRPVRPPGGARDPGTPRPGQPTERPAGVPEAASDAGQPPSAYPPAEEAVPGKPLEQGAPRPGssggdg 381
|
410 420 430
....*....|....*....|....*....|....*...
gi 568955967 2421 -------GCASPRHGRRLPNGYYAGHGAPRPRTARRGA 2451
Cdd:COG5180 382 apfqppnGAPQPGLGRRGAPGPPMGAGDLVQAALDGGG 419
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2273-2459 |
3.55e-07 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 55.95 E-value: 3.55e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2273 DRYAQERPDTGRARAREQRWSRSPSEGREHTTHRQGSSSVSGSPAPSTSGTSTPrrGRRQLPQTPCTPRPlvsyspaprr 2352
Cdd:PHA03307 793 EAAFRRPGRLRRSGPAADAASRTASKRKSRSHTPDGGSESSGPARPPGAAARPP--PARSSESSKSKPAA---------- 860
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2353 paarrmagPAAPPGGSPRGCRRAPRWPAHAPEGPRPRGADYTEPDSPrePPGGAHDPAPRSPRTPRAAGCASPRHG-RRL 2431
Cdd:PHA03307 861 --------AGGRARGKNGRRRPRPPEPRARPGAAAPPKAAAAAPPAG--APAPRPRPAPRVKLGPMPPGGPDPRGGfRRV 930
|
170 180
....*....|....*....|....*...
gi 568955967 2432 PNGYYagHGaPRPRTArrgAHDAYSESE 2459
Cdd:PHA03307 931 PPGDL--HT-PAPSAA---ALAAYCPPE 952
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
2269-2424 |
3.49e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 53.02 E-value: 3.49e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2269 APDRDRYAQERPDTGRARAREQRWSRSPSEGREHTTHRQGSSsvsgsPAPSTSGTSTPRRGRRQL--------------- 2333
Cdd:PHA03247 2628 PPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARR-----LGRAAQASSPPQRPRRRAarptvgsltsladpp 2702
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2334 --PQTP-CTPRPLVSYSPAPRRPAARRMAGPAAPPGGSPRGCRRAPRWPA-HAPEGPRPRGADYTEPDSPREPPGGahdP 2409
Cdd:PHA03247 2703 ppPPTPePAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGgPARPARPPTTAGPPAPAPPAAPAAG---P 2779
|
170
....*....|....*
gi 568955967 2410 APRSPRTPRAAGCAS 2424
Cdd:PHA03247 2780 PRRLTRPAVASLSES 2794
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
2309-2458 |
3.64e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 53.02 E-value: 3.64e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2309 SSSVSGSPAPSTSGTSTPRRGRRQLPQTPCTPRPlvsyspaPRRPAARRMAGPAAPPGGSPRGCRRAPRWPAHAPEGPRP 2388
Cdd:PHA03247 2544 ASDDAGDPPPPLPPAAPPAAPDRSVPPPRPAPRP-------SEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSP 2616
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2389 RGADYTEPDSPrePPGGAhdPAPRSPRTPRAAGCASPRHGRRLPngyyAGHGAPRPRTARRGAHDAYSES 2458
Cdd:PHA03247 2617 LPPDTHAPDPP--PPSPS--PAANEPDPHPPPTVPPPERPRDDP----APGRVSRPRRARRLGRAAQASS 2678
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2269-2462 |
6.83e-06 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 51.71 E-value: 6.83e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2269 APDRDRYAQERPDTGRARAREQRWSRSPSEGREHTTHRQGSSSVSGSPAPST-SGTSTPRRGRRQLPQTPCTPRPLVSYS 2347
Cdd:PHA03307 79 APANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPaPDLSEMLRPVGSPGPPPAASPPAAGAS 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2348 PAPRRPAARR---------MAGPAAPPGGSPRGCRRAPRWPAHAPEGPRPRG---ADYTEPDSPRePPGGAHDPAPRSP- 2414
Cdd:PHA03307 159 PAAVASDAASsrqaalplsSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSspiSASASSPAPA-PGRSAADDAGASSs 237
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568955967 2415 --RTPRAAGCAS--------PRHGR-RLPNGYYAGHGA--PRPRTARRGAHDAYSESEDDW 2462
Cdd:PHA03307 238 dsSSSESSGCGWgpenecplPRPAPiTLPTRIWEASGWngPSSRPGPASSSSSPRERSPSP 298
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2269-2447 |
1.40e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 50.94 E-value: 1.40e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2269 APDRDRYAQERPDTGRARAREQRWSRSPsEGREHTTHRQGSSSVSGSPAPSTSGTSTPRrgRRQLPQTPCTPRPLvsysp 2348
Cdd:PHA03307 847 PARSSESSKSKPAAAGGRARGKNGRRRP-RPPEPRARPGAAAPPKAAAAAPPAGAPAPR--PRPAPRVKLGPMPP----- 918
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2349 aprrpaarrmAGPAappggsPRGC-RRAPRWPAHAPEGPRPRGADYTEP-------DSPREPPggAHDPAPRspRTPR-- 2418
Cdd:PHA03307 919 ----------GGPD------PRGGfRRVPPGDLHTPAPSAAALAAYCPPevvaelvDHPLFPE--PWRPALA--FDPEal 978
|
170 180 190
....*....|....*....|....*....|..
gi 568955967 2419 ---AAGCASPRHGRRLPNGYYAGHGAPRPRTA 2447
Cdd:PHA03307 979 aeiAARCGGPPPRSGSAFGPLRASGPLRRRAA 1010
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2279-2462 |
2.94e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 49.60 E-value: 2.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2279 RPDTGRARAREQRWSRSPSEGREHTTHR-QGSSSVSGSPAPSTSGTSTPRRGRRQLPQTPCTPRPLVSYSPAPRRPAARR 2357
Cdd:PRK07764 587 VVGPAPGAAGGEGPPAPASSGPPEEAARpAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGG 666
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2358 MAGPAAPPGGSPRGCRRAPRWPAHAPEGPRPRGADYTEPdSPREPPGGAHDPAPRSPRTPRAAGCASPRHGRRLPNGYYA 2437
Cdd:PRK07764 667 DGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAP-AATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEP 745
|
170 180
....*....|....*....|....*
gi 568955967 2438 GHGAPRPRTARRGAHDAYSESEDDW 2462
Cdd:PRK07764 746 DDPPDPAGAPAQPPPPPAPAPAAAP 770
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
894-1276 |
5.08e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 49.17 E-value: 5.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 894 PTPYARPLRPDVKTHLDRPlVVDPQENR-------NNNTNKSRAPEALRP-TARPRESARDPDARRAWPGSPERAPGREG 965
Cdd:PHA03247 2571 PRPAPRPSEPAVTSRARRP-DAPPQSARprapvddRGDPRGPAPPSPLPPdTHAPDPPPPSPSPAANEPDPHPPPTVPPP 2649
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 966 PYGRESEPQQREHAPPREHAPWDAdterAKAGDAPRRHTHR---------------PVAEGEPRRHRARRRPGDEPDDRP 1030
Cdd:PHA03247 2650 ERPRDDPAPGRVSRPRRARRLGRA----AQASSPPQRPRRRaarptvgsltsladpPPPPPTPEPAPHALVSATPLPPGP 2725
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 1031 ERRPRPRDATR-----PARAADGEGDDGERKRRHRH---GPPAHDDrerrhrrrkenqgSGVPVSGPNLSTTRPIQQDLG 1102
Cdd:PHA03247 2726 AAARQASPALPaapapPAVPAGPATPGGPARPARPPttaGPPAPAP-------------PAAPAAGPPRRLTRPAVASLS 2792
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 1103 --RQDLPLAEDLDNMKNNKL------------ATGEP----ASPHDSLGHSGLPPSPAKIGNSTNPG------------- 1151
Cdd:PHA03247 2793 esRESLPSPWDPADPPAAVLapaaalppaaspAGPLPpptsAQPTAPPPPPGPPPPSLPLGGSVAPGgdvrrrppsrspa 2872
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 1152 --PALATNP------QNAASRRTPNNPGNPSNPGPPKTPenslivtnPSSTQPNSAKTARKPEHMAVEIPPacPPLNHTV 1223
Cdd:PHA03247 2873 akPAAPARPpvrrlaRPAVSRSTESFALPPDQPERPPQP--------QAPPPPQPQPQPPPPPQPQPPPPP--PPRPQPP 2942
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 568955967 1224 VQVNKNANPDPLPKKEEEKKEEEEADPGEDG------PKPMPPYSSMfiLSTTNPLRRL 1276
Cdd:PHA03247 2943 LAPTTDPAGAGEPSGAVPQPWLGALVPGRVAvprfrvPQPAPSREAP--ASSTPPLTGH 2999
|
|
| PHA03381 |
PHA03381 |
tegument protein VP22; Provisional |
2294-2430 |
6.07e-05 |
|
tegument protein VP22; Provisional
Pssm-ID: 177618 [Multi-domain] Cd Length: 290 Bit Score: 47.31 E-value: 6.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2294 RSPSEgREHTTHRQGS----SSVSGSPAPSTSGTSTPR-RGRRQLPQTPCTPRPLVSYSPAPRRPAARRMAGPAAPPGGS 2368
Cdd:PHA03381 5 RSPRP-KPHGTDEVEAdvyyDFISPDASPARVSFEEPAdRARRGAGQARGRSQAERRFHHYDEARADYPYYTGSSSEDER 83
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568955967 2369 PRGCRRaPRWPAHAPEGPRP---RGAdyTEPDSPREPPGGAHDPAPRSPRTPRAagcASPRHGRR 2430
Cdd:PHA03381 84 PADPRP-SRRPHAQPEASGPgpaRGA--RGPAGSRGRGRRAESPSPRDPPNPKG---ASAPRGRK 142
|
|
| Pro-rich |
pfam15240 |
Proline-rich protein; This family includes several eukaryotic proline-rich proteins. |
2295-2444 |
8.44e-05 |
|
Proline-rich protein; This family includes several eukaryotic proline-rich proteins.
Pssm-ID: 464580 [Multi-domain] Cd Length: 167 Bit Score: 45.41 E-value: 8.44e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2295 SPSEGREHTTHRQGSSSVSGSPAPSTSGTSTPRRGrrqlPQTPCTPRPLVSyspaprrpaarrMAGPAAPPGGSPRGcrR 2374
Cdd:pfam15240 15 SAQSSSEDVSQEDSPSLISEEEGQSQQGGQGPQGP----PPGGFPPQPPAS------------DDPPGPPPPGGPQQ--P 76
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2375 APRWPAHAPEGPRPRGADYTEPDSPREPPGGAHDPAPRSPRTPRAAGcaSPRHGRRLPNGYYAGHGAPRP 2444
Cdd:pfam15240 77 PPQGGKQKPQGPPPQGGPRPPPGKPQGPPPQGGNQQQGPPPPGKPQG--PPPQGGGPPPQGGNQQGPPPP 144
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2279-2449 |
1.01e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 47.86 E-value: 1.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2279 RPDTGRARAREQRWS------RSPSE--------GREHTTHRQGSSSVSGSPAPSTSGTSTPRRGRRQLPQTPCTPRPL- 2343
Cdd:PHA03307 738 RYSPRRARARASAWDitdalfSNPSLvpaklaeaLALLEPAEPQRGAGSSPPVRAEAAFRRPGRLRRSGPAADAASRTAs 817
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2344 VSYSPAPRRPAARRMAGPAAPPG--GSPRGCRRAP-RWPAHAPEGPRPRGADYTEPDSPREP---------PGGAHDPAP 2411
Cdd:PHA03307 818 KRKSRSHTPDGGSESSGPARPPGaaARPPPARSSEsSKSKPAAAGGRARGKNGRRRPRPPEPrarpgaaapPKAAAAAPP 897
|
170 180 190
....*....|....*....|....*....|....*...
gi 568955967 2412 RSPRTPRAAGCASPRHGRRLPNGyyaghgaPRPRTARR 2449
Cdd:PHA03307 898 AGAPAPRPRPAPRVKLGPMPPGG-------PDPRGGFR 928
|
|
| PRK12678 |
PRK12678 |
transcription termination factor Rho; Provisional |
870-1062 |
1.03e-04 |
|
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 47.59 E-value: 1.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 870 TSEMRKQNLLAS-REALYG---DAAERWPTPYARPLRPDVKTHLDRPLVVDPQENRnnNTNKSRAPEALRPTARPRESAR 945
Cdd:PRK12678 43 TSGMRKGELIAAiKEARGGgaaAAAATPAAPAAAARRAARAAAAARQAEQPAAEAA--AAKAEAAPAARAAAAAAAEAAS 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 946 DPDARRAWPGSPERAPGREGPYGRESEPQQREHAPPREHApwDADTERAKAGDAPRRHTHRPVAEGEPrrhrarrRPGDE 1025
Cdd:PRK12678 121 APEAAQARERRERGEAARRGAARKAGEGGEQPATEARADA--AERTEEEERDERRRRGDREDRQAEAE-------RGERG 191
|
170 180 190
....*....|....*....|....*....|....*..
gi 568955967 1026 PDDRPERRPRPRDATRPARAADGEGDDGERKRRHRHG 1062
Cdd:PRK12678 192 RREERGRDGDDRDRRDRREQGDRREERGRRDGGDRRG 228
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
2318-2451 |
4.38e-04 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 45.83 E-value: 4.38e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2318 PSTSGTSTPRR-----GRRQLPqtPCTPRPlvsyspaprrpaarrMAGPAAPPGGS--PRGCRRAPRWPAHAPEGPRPRG 2390
Cdd:PHA03378 676 PSPTGANTMLPiqwapGTMQPP--PRAPTP---------------MRPPAAPPGRAqrPAAATGRARPPAAAPGRARPPA 738
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 568955967 2391 ADYTEPDSPREPPGGAHDP--APRSPRTPRAA-GCASPRHGRRLPngyyaghgaPRPRTARRGA 2451
Cdd:PHA03378 739 AAPGRARPPAAAPGRARPPaaAPGRARPPAAApGAPTPQPPPQAP---------PAPQQRPRGA 793
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2358-2459 |
6.09e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 45.36 E-value: 6.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2358 MAGPAAPPGGSPRGCRRAPRWPAHAPEGPRPRGADytePDSPREPPGGAHDPAPRSPRTPRAAGCASPRHGRRLPNGyyA 2437
Cdd:PRK07764 387 VAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAA---APAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAA--A 461
|
90 100
....*....|....*....|..
gi 568955967 2438 GHGAPRPRTARRGAHDAYSESE 2459
Cdd:PRK07764 462 PSAQPAPAPAAAPEPTAAPAPA 483
|
|
| PHA03381 |
PHA03381 |
tegument protein VP22; Provisional |
2358-2451 |
9.38e-04 |
|
tegument protein VP22; Provisional
Pssm-ID: 177618 [Multi-domain] Cd Length: 290 Bit Score: 43.85 E-value: 9.38e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2358 MAGPAAPPGGSPRGCRRAPRWPAHA-PEGPR------PRGADY-------TEPDSPREPP--------GGAHDP----AP 2411
Cdd:PHA03381 29 DASPARVSFEEPADRARRGAGQARGrSQAERrfhhydEARADYpyytgssSEDERPADPRpsrrphaqPEASGPgparGA 108
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 568955967 2412 RSPRTPRAAGCASPRHGRRLPNgyyAGHGAPRPRtARRGA 2451
Cdd:PHA03381 109 RGPAGSRGRGRRAESPSPRDPP---NPKGASAPR-GRKSA 144
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2269-2426 |
1.15e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 44.21 E-value: 1.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2269 APDRDRYAQERPDTGRARAREQRWSRSPSEGREHTTHRQGSSSVSGSPAPSTSGTSTPRRGRRQ-LPQTPCTPRPLVSYS 2347
Cdd:PRK07764 635 APAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPaQPAPAPAATPPAGQA 714
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568955967 2348 PAPRRPAARRMAGPAAPPGGSPRGcrraPRWPAHAPEGPRPRGADYTEPDSPREPPGGAhdPAPRSPRTPRAAGCASPR 2426
Cdd:PRK07764 715 DDPAAQPPQAAQGASAPSPAADDP----VPLPPEPDDPPDPAGAPAQPPPPPAPAPAAA--PAAAPPPSPPSEEEEMAE 787
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2359-2451 |
2.06e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 43.44 E-value: 2.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2359 AGPAAPPGGSPRGCRRAPRWPAHAPE---GPRPRGADYTEPDSPREPPGGAHDPAPRSPRTPRAAGCASP-RHGRRLPNG 2434
Cdd:PRK07764 405 APAAAPAPAAAAPAAAAAPAPAAAPQpapAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPePTAAPAPAP 484
|
90
....*....|....*..
gi 568955967 2435 YYAGHGAPRPRTARRGA 2451
Cdd:PRK07764 485 PAAPAPAAAPAAPAAPA 501
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
879-1264 |
2.71e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 43.39 E-value: 2.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 879 LASREAlyGDAAERWPtPYARPLRPDVKTHLDRPlvvdpqenrnnntnksrAPEALRPTARPREsaRDPDARrAWPGSPe 958
Cdd:PHA03247 2543 LASDDA--GDPPPPLP-PAAPPAAPDRSVPPPRP-----------------APRPSEPAVTSRA--RRPDAP-PQSARP- 2598
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 959 RAPGreGPYGRESEPQQREHAPPREHAP-WDADTERAKAGDAPRRHthrPVAEGEPRRHRARRRPGDEPDDRPerrprpr 1037
Cdd:PHA03247 2599 RAPV--DDRGDPRGPAPPSPLPPDTHAPdPPPPSPSPAANEPDPHP---PPTVPPPERPRDDPAPGRVSRPRR------- 2666
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 1038 dATRPARAADGEGDdgERKRRHRHGPPAHddrerrhrrrkenqgsgvpvsGPNLSTTRPIQQDlgrqdlplaedldnmkn 1117
Cdd:PHA03247 2667 -ARRLGRAAQASSP--PQRPRRRAARPTV---------------------GSLTSLADPPPPP----------------- 2705
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 1118 nklATGEPAsPHDSLGHSGLPPSPAKIGNSTNPGPALATNPQNAASRRTPNNPGNPSNPGPPKTPENSLIVTNPSSTQPn 1197
Cdd:PHA03247 2706 ---PTPEPA-PHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPP- 2780
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568955967 1198 sAKTARKPEHMAVEIPPACP----PLNHTVVQVNKNA--NPDPLPKKEEEKKEEEEADPGEDGPKPMPPYSSM 1264
Cdd:PHA03247 2781 -RRLTRPAVASLSESRESLPspwdPADPPAAVLAPAAalPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPL 2852
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2359-2451 |
3.01e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 43.05 E-value: 3.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2359 AGPAAPPGGSPRGCRRAPRWPAHAPEGPRPRGADYTEPDSPREPPGGAHDPAPRSPRTPRAAGcASPRHGRRLPNGYYAG 2438
Cdd:PRK07764 586 AVVGPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVA-APEHHPKHVAVPDASD 664
|
90
....*....|...
gi 568955967 2439 HGAPRPRTARRGA 2451
Cdd:PRK07764 665 GGDGWPAKAGGAA 677
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
2249-2450 |
3.73e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 43.00 E-value: 3.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2249 PKDRKHRPHHHHHHHHHHPPAPDRDRYAQ-----ERPDTGRARAREQRWSrSPSEGREHTTHRQGSSSVSGS-------- 2315
Cdd:PHA03247 2628 PPSPSPAANEPDPHPPPTVPPPERPRDDPapgrvSRPRRARRLGRAAQAS-SPPQRPRRRAARPTVGSLTSLadpppppp 2706
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2316 -----PAPSTSGTSTP---RRGRRQLPQTPCTPRP------LVSYSPAPRRPAARRMAG------PAAPPGGSPRGCRRA 2375
Cdd:PHA03247 2707 tpepaPHALVSATPLPpgpAAARQASPALPAAPAPpavpagPATPGGPARPARPPTTAGppapapPAAPAAGPPRRLTRP 2786
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2376 PRWPAHAPEGPRPRGADYTEPDSPREPPGGA----HDPAPRSPRTPRAAGCASPRHGRRLPNGYYAGHG-APRPRTARRG 2450
Cdd:PHA03247 2787 AVASLSESRESLPSPWDPADPPAAVLAPAAAlppaASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSvAPGGDVRRRP 2866
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2279-2461 |
3.91e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 42.67 E-value: 3.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2279 RPDTGRARAREQRWSRSPSEGREHTTHRQGSSSVSGSPAPSTSGTSTPRRGRRQLPQTPCTPRPLVSYSPAPRRPAARRM 2358
Cdd:PRK07764 601 PAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAA 680
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2359 AGPAAPPGGSPRGCRRA-------PRWPAHAPEGPRPRGADYTEPDSPREPPGGAHDPAPRsPRTPRAAGCASPrhgrrl 2431
Cdd:PRK07764 681 PPPAPAPAAPAAPAGAApaqpapaPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPL-PPEPDDPPDPAG------ 753
|
170 180 190
....*....|....*....|....*....|
gi 568955967 2432 PNGYYAGHGAPRPRTARRGAHDAYSESEDD 2461
Cdd:PRK07764 754 APAQPPPPPAPAPAAAPAAAPPPSPPSEEE 783
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
2293-2418 |
3.97e-03 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 42.75 E-value: 3.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2293 SRSPSEGREHTTHRQGSSSVSGSPA----PST--------SGTSTPRRGRRqlPQTPCTPRPLVSYSPaprrpaarrmag 2360
Cdd:PTZ00449 540 SDEPKEGGKPGETKEGEVGKKPGPAkehkPSKiptlskkpEFPKDPKHPKD--PEEPKKPKRPRSAQR------------ 605
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568955967 2361 PAAPPggSPR-----GCRRAPRWPaHAPEGPRpRGADYTEPDSPREPPGGAHDPAPRSPRTPR 2418
Cdd:PTZ00449 606 PTRPK--SPKlpellDIPKSPKRP-ESPKSPK-RPPPPQRPSSPERPEGPKIIKSPKPPKSPK 664
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
2093-2432 |
4.23e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 42.62 E-value: 4.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2093 SPERGPPIDMPNSQPNSQSVEMREMGTDgysdsehyLPMEGQTraasmPRLPAENqrrRGRPRGNDLSTIS--DTSPMKR 2170
Cdd:PHA03247 2563 APDRSVPPPRPAPRPSEPAVTSRARRPD--------APPQSAR-----PRAPVDD---RGDPRGPAPPSPLppDTHAPDP 2626
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2171 SASVLGPKARRLDD-YSLERVPPEENQRYHQRRRDRGHRTSeRSLGRytdvdtglGTDLSMTTQsGDLPSKDRD-----Q 2244
Cdd:PHA03247 2627 PPPSPSPAANEPDPhPPPTVPPPERPRDDPAPGRVSRPRRA-RRLGR--------AAQASSPPQ-RPRRRAARPtvgslT 2696
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2245 DRGRPKDRKHRPHHHHHHHHHHPPAPdrdryaqERPDTGRARAREQRWSRSPSEGREHTTHRQGSSSVSGSPAPSTSGTS 2324
Cdd:PHA03247 2697 SLADPPPPPPTPEPAPHALVSATPLP-------PGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAP 2769
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2325 TPRRGRRQLPQtPCTPRPLV-----------SYSPAPRRPAARRMAGPAAPPGGSPRGCRRAPRWPAHAPEGPRPrgady 2393
Cdd:PHA03247 2770 APPAAPAAGPP-RRLTRPAVaslsesreslpSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPP----- 2843
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 568955967 2394 tEPDSPREPPGGAHDP----APRSPRTPRAAGCASPRH--GRRLP 2432
Cdd:PHA03247 2844 -GPPPPSLPLGGSVAPggdvRRRPPSRSPAAKPAAPARppVRRLA 2887
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
2296-2425 |
5.07e-03 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 42.36 E-value: 5.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2296 PSEGREHTTHRQGSSSVSGSPAPSTSGTSTPRR---GRRQLPQTPCTPRPLVSySPAPRRPAARRMAGPAAPPGGSPRGC 2372
Cdd:PHA03378 676 PSPTGANTMLPIQWAPGTMQPPPRAPTPMRPPAappGRAQRPAAATGRARPPA-AAPGRARPPAAAPGRARPPAAAPGRA 754
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 568955967 2373 RRaprwPAHAPEGPRPRGADYTEPdSPREPPGGAhdPAPRspRTPRAAGCASP 2425
Cdd:PHA03378 755 RP----PAAAPGRARPPAAAPGAP-TPQPPPQAP--PAPQ--QRPRGAPTPQP 798
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2276-2426 |
5.92e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 41.90 E-value: 5.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2276 AQERPDTGRARAREQRWSRSPSEGREHTTHRQGSSSVSGSPAPSTSGTSTPRRGRRQLPQTPCTPRPlvSYSPAPRRPAA 2355
Cdd:PRK07764 626 APAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAA--PAGAAPAQPAP 703
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568955967 2356 RRMAGPAAPPGGSPRGcrrAPRWPAHAPEGPRPRGADY----TEPDSPREPPGGAHDPAPRSPRTPRAAGCASPR 2426
Cdd:PRK07764 704 APAATPPAGQADDPAA---QPPQAAQGASAPSPAADDPvplpPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPP 775
|
|
| dnaA |
PRK14086 |
chromosomal replication initiator protein DnaA; |
2286-2444 |
7.50e-03 |
|
chromosomal replication initiator protein DnaA;
Pssm-ID: 237605 [Multi-domain] Cd Length: 617 Bit Score: 41.73 E-value: 7.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2286 RAREQRWSRSPSEGREHTTHRQGSSSVSGSPAPSTSGTSTPRRGRRQLPQTPCT-PRPLVSYSPAPRRPAARRMAGPAAP 2364
Cdd:PRK14086 104 RTSEPELPRPGRRPYEGYGGPRADDRPPGLPRQDQLPTARPAYPAYQQRPEPGAwPRAADDYGWQQQRLGFPPRAPYASP 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 2365 PGGSPRGCRRAPRWPAHAPEGPRPR------GADYTEP-----DSPREPPGGAHDPApRSPRTPRAAGCASPRHGRRLPn 2433
Cdd:PRK14086 184 ASYAPEQERDREPYDAGRPEYDQRRrdydhpRPDWDRPrrdrtDRPEPPPGAGHVHR-GGPGPPERDDAPVVPIRPSAP- 261
|
170
....*....|.
gi 568955967 2434 GYYAGHGAPRP 2444
Cdd:PRK14086 262 GPLAAQPAPAP 272
|
|
| PKD_channel |
pfam08016 |
Polycystin cation channel; This family contains the cation channel region from group II of ... |
606-803 |
8.88e-03 |
|
Polycystin cation channel; This family contains the cation channel region from group II of Transient receptor potential (TRP) channels, the TRPP subfamily, including PKD1, PKD2, PKD2L and mucolipin proteins.
Pssm-ID: 462341 [Multi-domain] Cd Length: 225 Bit Score: 40.34 E-value: 8.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 606 LSDFLYYAEFIFLGL---FMSEMFIKmYGLGTRPYFHSSFNCFDCGVIIGSIFEVIWAVIKPG----------------T 666
Cdd:pfam08016 6 RSLFILLCEIVFVVFflyFVVEEILK-IRKHRPSYLRSVWNLLDLAIVILSVVLIVLNIYRDFladrliksveaspvtfI 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 667 SFG------------ISVLRALRLLRIFKVTKYWASLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFnfd 734
Cdd:pfam08016 85 DFDrvaqldnlyriiLAFLVFLTWLKLFKVLRFNKTMSLFTKTLSRAWKDLAGFALMFVIFFFAYAQFGYLLFGTQA--- 161
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568955967 735 egtppTNFDTFPAAIMTVFQILTG-EDWNEVMYdgiksqggvqGGMVFSI-YFIVLTLFGNYTLLNVFLAI 803
Cdd:pfam08016 162 -----PNFSNFVKSILTLFRTILGdFGYNEIFS----------GNRVLGPlLFLTFVFLVIFILLNLFLAI 217
|
|
| PLN03223 |
PLN03223 |
Polycystin cation channel protein; Provisional |
720-813 |
9.51e-03 |
|
Polycystin cation channel protein; Provisional
Pssm-ID: 215637 [Multi-domain] Cd Length: 1634 Bit Score: 41.47 E-value: 9.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955967 720 ALLGMQLFGGQFnfdegtppTNFDTFPAAIMTVFQILTGeDWNEVMYDgIKSQGGVQGgMVFSIYFIVLTLFGNYTLLNV 799
Cdd:PLN03223 1345 AFIGHVIFGNAS--------VHFSDMTDSINSLFENLLG-DITYFNED-LKNLTGLQF-VVGMIYFYSYNIFVFMILFNF 1413
|
90
....*....|....*...
gi 568955967 800 FLAIAVDNL----ANAQE 813
Cdd:PLN03223 1414 LLAIICDAFgevkANAAE 1431
|
|
| |
