|
Name |
Accession |
Description |
Interval |
E-value |
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1604-1861 |
2.64e-71 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane. :
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 239.09 E-value: 2.64e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 1604 SPPFEYTIMAMIALNTIVLMMKFYGAS-VAYENALRVFNIVFTSLFSLECVLKVMAFGI-LNYFRDAWNIFDFVTVLGSI 1681
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPeEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFkKRYFRSPWNILDFVVVLPSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 1682 TDILVTEFGNnFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIGIDGE 1761
Cdd:pfam00520 81 ISLVLSSVGS-LSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKTWE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 1762 DedsdedefQITEHNNFRTFFQALMLLFRSATGEAWHNIMLSCLSGKpcdknsgiltadcGNEFAYFYFVSFIFLCSFLM 1841
Cdd:pfam00520 160 N--------PDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGK-------------GEFWAYIYFVSFIILGGFLL 218
|
250 260
....*....|....*....|
gi 568955987 1842 LNLFVAVIMDNFEYLTRDSS 1861
Cdd:pfam00520 219 LNLFIAVIIDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
188-462 |
6.42e-68 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane. :
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 229.46 E-value: 6.42e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 188 WPPFEYMILATIIANCIVLALEQHLPDDDKTPmsERLDDTEPYFIGIFCFEAGIKIVALGFAFHkgsYLRNGWNVMDFVV 267
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEEPLT--TVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVV 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 268 VLTGILATVGTE----FDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILIFAIIGLEFYMGKF 343
Cdd:pfam00520 76 VLPSLISLVLSSvgslSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 344 HTtcfeegtddiqgespapcgteepartcpngtkcqpyWEGPNNGITQFDNILFAVLTVFQCITMEGWTDLLYNSNDASG 423
Cdd:pfam00520 156 KT------------------------------------WENPDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKG 199
|
250 260 270
....*....|....*....|....*....|....*....
gi 568955987 424 NTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVE 462
Cdd:pfam00520 200 EFWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
577-815 |
7.77e-57 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane. :
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 197.87 E-value: 7.77e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 577 QAFYWTVLSLVALNTLCVAIVHYNQPEW-LSDFLYYAEFIFLGLFMSEMFIKMYGLG-TRPYFHSSFNCFDCGVIIGSIF 654
Cdd:pfam00520 2 RYFELFILLLILLNTIFLALETYFQPEEpLTTVLEILDYVFTGIFTLEMLLKIIAAGfKKRYFRSPWNILDFVVVLPSLI 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 655 EVIWAVIKPGtsFGISVLRALRLLRIFKVTKYWASLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFDE 734
Cdd:pfam00520 82 SLVLSSVGSL--SGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKTWE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 735 G--TPPTNFDTFPAAIMTVFQILTGEDWNEVMYDGIKSqggvQGGMVFSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQE 812
Cdd:pfam00520 160 NpdNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDG----KGEFWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTE 235
|
...
gi 568955987 813 LTK 815
Cdd:pfam00520 236 RTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1283-1514 |
2.70e-56 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane. :
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 196.33 E-value: 2.70e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 1283 RYFEMCILMVIAMSSIALAAEDPVQPNAPRNNVLRYFDYVFTGVFTFEMVIKMIDLGLVLHqgaYFRDLWNILDFIVVSG 1362
Cdd:pfam00520 2 RYFELFILLLILLNTIFLALETYFQPEEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVVVLP 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 1363 ALVAFAFTGNSKGKDINtikSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIVYMLFMFIFAVVAVQLFKGKF 1442
Cdd:pfam00520 79 SLISLVLSSVGSLSGLR---VLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKL 155
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568955987 1443 fhctdeskeferdcrgkyllyeKNEVKARDREWkkyefHYDNVLWALLTLFTVSTGEGWPQVLKHSVDATFE 1514
Cdd:pfam00520 156 ----------------------KTWENPDNGRT-----NFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKGE 200
|
|
| Ca_chan_IQ |
pfam08763 |
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular ... |
1933-2010 |
9.09e-35 |
|
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular calcium entry in response to changes in membrane potential. The isoleucine-glutamine (IQ) motif in the voltage gated calcium channel IQ domain interacts with hydrophobic pockets of Ca2+/calmodulin. The interaction regulates two self-regulatory calcium dependent feedback mechanism, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF). :
Pssm-ID: 462591 Cd Length: 77 Bit Score: 128.10 E-value: 9.09e-35
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568955987 1933 NSTLMALIRTALDIKIAKGGaDKQQMDAELRKEMMAIWPNLSQKTLDLLVTPHKSTDLTVGKIYAAMMIMEYYRQSKA 2010
Cdd:pfam08763 1 TATLFALIRTSLKIKLAPAG-EMDQADAELRKIIKKIWPRLSQKTLDLLVPPPSDDEMTVGKIYAALLIQDYYRQNKA 77
|
|
| GPHH |
pfam16905 |
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in ... |
1870-1923 |
1.67e-28 |
|
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in this short domain on voltage-dependent L-type calcium channel proteins in eukaryotes. The domain is closely associated with the IQ-domain, pfam08763. :
Pssm-ID: 465306 Cd Length: 54 Bit Score: 109.66 E-value: 1.67e-28
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 568955987 1870 EYVRVWAEYDPAAWGRMPYPDMYQMLRHMSPPLGLGKKCPARVAYKRLLRMDLP 1923
Cdd:pfam16905 1 EFVRVWAEYDPAATGRISYQDMYELLRRISPPLGFGKKCPARVAYKRLVRMNMP 54
|
|
| PHA03307 super family |
cl33723 |
transcriptional regulator ICP4; Provisional |
2038-2452 |
2.17e-10 |
|
transcriptional regulator ICP4; Provisional The actual alignment was detected with superfamily member PHA03307:
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 66.73 E-value: 2.17e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2038 EGGPSQNALPSTQLDPGGGLMAHEGGMKESPSWVtqrAQEMFQKTGTWSPERGPPIDMPNSQPNSQSVEMREMGTDGYSd 2117
Cdd:PHA03307 16 EGGEFFPRPPATPGDAADDLLSGSQGQLVSDSAE---LAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWS- 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2118 sehylpmEGQTRAASMPRLPAENQRRRGRPRGNDlSTISDTSPMKRSASVLGPKARRldDYSLERVPPEENQRYH-QRRR 2196
Cdd:PHA03307 92 -------LSTLAPASPAREGSPTPPGPSSPDPPP-PTPPPASPPPSPAPDLSEMLRP--VGSPGPPPAASPPAAGaSPAA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2197 DRGHRTSERSLGRYTDVDtglgtdlSMTTQSGDLPSKDR--DQDRGRPKDRkhrphhhhHHHHHHPPAPDRDRYAQERPD 2274
Cdd:PHA03307 162 VASDAASSRQAALPLSSP-------EETARAPSSPPAEPppSTPPAAASPR--------PPRRSSPISASASSPAPAPGR 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2275 TGRARAREQRWSRSPSEGREhtthrQGSSSVSGSPAPSTSGTSTPRRGRRQLPQTPCTPRPLVSYSPAPRRPaarrmAGP 2354
Cdd:PHA03307 227 SAADDAGASSSDSSSSESSG-----CGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRE-----RSP 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2355 AAPPGGSPRGCRRAPRWPAHAPEGPRPRGADYTEPDSPRE-----PPGGAHDPAPRSPRTPRAAGCASPR---HGRRLPN 2426
Cdd:PHA03307 297 SPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSrgaavSPGPSPSRSPSPSRPPPPADPSSPRkrpRPSRAPS 376
|
410 420
....*....|....*....|....*.
gi 568955987 2427 GYYAGHGAPRPRTARRGAHDAYSESE 2452
Cdd:PHA03307 377 SPAASAGRPTRRRARAAVAGRARRRD 402
|
|
| PHA03247 super family |
cl33720 |
large tegument protein UL36; Provisional |
893-1275 |
5.55e-05 |
|
large tegument protein UL36; Provisional The actual alignment was detected with superfamily member PHA03247:
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 48.78 E-value: 5.55e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 893 PTPYARPLRPDVKTHLDRPlVVDPQENR-------NNNTNKSRAPEALRP-TARPRESARDPDARRAWPGSPERAPGREG 964
Cdd:PHA03247 2571 PRPAPRPSEPAVTSRARRP-DAPPQSARprapvddRGDPRGPAPPSPLPPdTHAPDPPPPSPSPAANEPDPHPPPTVPPP 2649
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 965 PYGRESEPQQREHAPPREHAPWDAdterAKAGDAPRRHTHR---------------PVAEGEPRRHRARRRPGDEPDDRP 1029
Cdd:PHA03247 2650 ERPRDDPAPGRVSRPRRARRLGRA----AQASSPPQRPRRRaarptvgsltsladpPPPPPTPEPAPHALVSATPLPPGP 2725
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 1030 ERRPRPRDATR-----PARAADGEGDDGERKRRHRH---GPPAHDDrerrhrrrkenqgSGVPVSGPNLSTTRPIQQDLG 1101
Cdd:PHA03247 2726 AAARQASPALPaapapPAVPAGPATPGGPARPARPPttaGPPAPAP-------------PAAPAAGPPRRLTRPAVASLS 2792
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 1102 --RQDLPLAEDLDNMKNNKL------------ATGEP----ASPHDSLGHSGLPPSPAKIGNSTNPG------------- 1150
Cdd:PHA03247 2793 esRESLPSPWDPADPPAAVLapaaalppaaspAGPLPpptsAQPTAPPPPPGPPPPSLPLGGSVAPGgdvrrrppsrspa 2872
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 1151 --PALATNP------QNAASRRTPNNPGNPSNPGPPKTPenslivtnPSSTQPNSAKTARKPEHMAVEIPPacPPLNHTV 1222
Cdd:PHA03247 2873 akPAAPARPpvrrlaRPAVSRSTESFALPPDQPERPPQP--------QAPPPPQPQPQPPPPPQPQPPPPP--PPRPQPP 2942
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 568955987 1223 VQVNKNANPDPLPKKEEEKKEEEEADPGEDG------PKPMPPYSSMfiLSTTNPLRRL 1275
Cdd:PHA03247 2943 LAPTTDPAGAGEPSGAVPQPWLGALVPGRVAvprfrvPQPAPSREAP--ASSTPPLTGH 2999
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1604-1861 |
2.64e-71 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 239.09 E-value: 2.64e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 1604 SPPFEYTIMAMIALNTIVLMMKFYGAS-VAYENALRVFNIVFTSLFSLECVLKVMAFGI-LNYFRDAWNIFDFVTVLGSI 1681
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPeEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFkKRYFRSPWNILDFVVVLPSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 1682 TDILVTEFGNnFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIGIDGE 1761
Cdd:pfam00520 81 ISLVLSSVGS-LSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKTWE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 1762 DedsdedefQITEHNNFRTFFQALMLLFRSATGEAWHNIMLSCLSGKpcdknsgiltadcGNEFAYFYFVSFIFLCSFLM 1841
Cdd:pfam00520 160 N--------PDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGK-------------GEFWAYIYFVSFIILGGFLL 218
|
250 260
....*....|....*....|
gi 568955987 1842 LNLFVAVIMDNFEYLTRDSS 1861
Cdd:pfam00520 219 LNLFIAVIIDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
188-462 |
6.42e-68 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 229.46 E-value: 6.42e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 188 WPPFEYMILATIIANCIVLALEQHLPDDDKTPmsERLDDTEPYFIGIFCFEAGIKIVALGFAFHkgsYLRNGWNVMDFVV 267
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEEPLT--TVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVV 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 268 VLTGILATVGTE----FDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILIFAIIGLEFYMGKF 343
Cdd:pfam00520 76 VLPSLISLVLSSvgslSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 344 HTtcfeegtddiqgespapcgteepartcpngtkcqpyWEGPNNGITQFDNILFAVLTVFQCITMEGWTDLLYNSNDASG 423
Cdd:pfam00520 156 KT------------------------------------WENPDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKG 199
|
250 260 270
....*....|....*....|....*....|....*....
gi 568955987 424 NTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVE 462
Cdd:pfam00520 200 EFWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
577-815 |
7.77e-57 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 197.87 E-value: 7.77e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 577 QAFYWTVLSLVALNTLCVAIVHYNQPEW-LSDFLYYAEFIFLGLFMSEMFIKMYGLG-TRPYFHSSFNCFDCGVIIGSIF 654
Cdd:pfam00520 2 RYFELFILLLILLNTIFLALETYFQPEEpLTTVLEILDYVFTGIFTLEMLLKIIAAGfKKRYFRSPWNILDFVVVLPSLI 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 655 EVIWAVIKPGtsFGISVLRALRLLRIFKVTKYWASLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFDE 734
Cdd:pfam00520 82 SLVLSSVGSL--SGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKTWE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 735 G--TPPTNFDTFPAAIMTVFQILTGEDWNEVMYDGIKSqggvQGGMVFSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQE 812
Cdd:pfam00520 160 NpdNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDG----KGEFWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTE 235
|
...
gi 568955987 813 LTK 815
Cdd:pfam00520 236 RTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1283-1514 |
2.70e-56 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 196.33 E-value: 2.70e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 1283 RYFEMCILMVIAMSSIALAAEDPVQPNAPRNNVLRYFDYVFTGVFTFEMVIKMIDLGLVLHqgaYFRDLWNILDFIVVSG 1362
Cdd:pfam00520 2 RYFELFILLLILLNTIFLALETYFQPEEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVVVLP 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 1363 ALVAFAFTGNSKGKDINtikSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIVYMLFMFIFAVVAVQLFKGKF 1442
Cdd:pfam00520 79 SLISLVLSSVGSLSGLR---VLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKL 155
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568955987 1443 fhctdeskeferdcrgkyllyeKNEVKARDREWkkyefHYDNVLWALLTLFTVSTGEGWPQVLKHSVDATFE 1514
Cdd:pfam00520 156 ----------------------KTWENPDNGRT-----NFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKGE 200
|
|
| Ca_chan_IQ |
pfam08763 |
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular ... |
1933-2010 |
9.09e-35 |
|
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular calcium entry in response to changes in membrane potential. The isoleucine-glutamine (IQ) motif in the voltage gated calcium channel IQ domain interacts with hydrophobic pockets of Ca2+/calmodulin. The interaction regulates two self-regulatory calcium dependent feedback mechanism, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF).
Pssm-ID: 462591 Cd Length: 77 Bit Score: 128.10 E-value: 9.09e-35
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568955987 1933 NSTLMALIRTALDIKIAKGGaDKQQMDAELRKEMMAIWPNLSQKTLDLLVTPHKSTDLTVGKIYAAMMIMEYYRQSKA 2010
Cdd:pfam08763 1 TATLFALIRTSLKIKLAPAG-EMDQADAELRKIIKKIWPRLSQKTLDLLVPPPSDDEMTVGKIYAALLIQDYYRQNKA 77
|
|
| GPHH |
pfam16905 |
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in ... |
1870-1923 |
1.67e-28 |
|
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in this short domain on voltage-dependent L-type calcium channel proteins in eukaryotes. The domain is closely associated with the IQ-domain, pfam08763.
Pssm-ID: 465306 Cd Length: 54 Bit Score: 109.66 E-value: 1.67e-28
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 568955987 1870 EYVRVWAEYDPAAWGRMPYPDMYQMLRHMSPPLGLGKKCPARVAYKRLLRMDLP 1923
Cdd:pfam16905 1 EFVRVWAEYDPAATGRISYQDMYELLRRISPPLGFGKKCPARVAYKRLVRMNMP 54
|
|
| Ca_chan_IQ |
smart01062 |
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular ... |
1988-2018 |
9.94e-11 |
|
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular calcium entry in response to changes in membrane potential. The isoleucine-glutamine (IQ) motif in the voltage gated calcium channel IQ domain interacts with hydrophobic pockets of Ca2+/calmodulin. The interaction regulates two self-regulatory calcium dependent feedback mechanism, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF).
Pssm-ID: 198130 Cd Length: 31 Bit Score: 58.39 E-value: 9.94e-11
10 20 30
....*....|....*....|....*....|.
gi 568955987 1988 TDLTVGKIYAAMMIMEYYRQSKAKKLQAMRE 2018
Cdd:smart01062 1 DELTVGKIYAAMLIQDYFRQFKSRKEQELLG 31
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2038-2452 |
2.17e-10 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 66.73 E-value: 2.17e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2038 EGGPSQNALPSTQLDPGGGLMAHEGGMKESPSWVtqrAQEMFQKTGTWSPERGPPIDMPNSQPNSQSVEMREMGTDGYSd 2117
Cdd:PHA03307 16 EGGEFFPRPPATPGDAADDLLSGSQGQLVSDSAE---LAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWS- 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2118 sehylpmEGQTRAASMPRLPAENQRRRGRPRGNDlSTISDTSPMKRSASVLGPKARRldDYSLERVPPEENQRYH-QRRR 2196
Cdd:PHA03307 92 -------LSTLAPASPAREGSPTPPGPSSPDPPP-PTPPPASPPPSPAPDLSEMLRP--VGSPGPPPAASPPAAGaSPAA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2197 DRGHRTSERSLGRYTDVDtglgtdlSMTTQSGDLPSKDR--DQDRGRPKDRkhrphhhhHHHHHHPPAPDRDRYAQERPD 2274
Cdd:PHA03307 162 VASDAASSRQAALPLSSP-------EETARAPSSPPAEPppSTPPAAASPR--------PPRRSSPISASASSPAPAPGR 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2275 TGRARAREQRWSRSPSEGREhtthrQGSSSVSGSPAPSTSGTSTPRRGRRQLPQTPCTPRPLVSYSPAPRRPaarrmAGP 2354
Cdd:PHA03307 227 SAADDAGASSSDSSSSESSG-----CGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRE-----RSP 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2355 AAPPGGSPRGCRRAPRWPAHAPEGPRPRGADYTEPDSPRE-----PPGGAHDPAPRSPRTPRAAGCASPR---HGRRLPN 2426
Cdd:PHA03307 297 SPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSrgaavSPGPSPSRSPSPSRPPPPADPSSPRkrpRPSRAPS 376
|
410 420
....*....|....*....|....*.
gi 568955987 2427 GYYAGHGAPRPRTARRGAHDAYSESE 2452
Cdd:PHA03307 377 SPAASAGRPTRRRARAAVAGRARRRD 402
|
|
| PBP1 |
COG5180 |
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification]; ... |
2028-2444 |
4.70e-07 |
|
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification];
Pssm-ID: 444064 [Multi-domain] Cd Length: 548 Bit Score: 55.07 E-value: 4.70e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2028 QRMEPPSPTQEGG-PSQNALPSTQLDPGGGLMAHEGGMKESPSWV------TQRAQEMFQKTGTWSPERGPPidmpnSQP 2100
Cdd:COG5180 14 TVPIPPNAARPVLsPELWAAANNDAVSQGDRSALASSPTRPYARKifepldIKLALGKPQLPSVAEPEAYLD-----PAP 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2101 NSQSVEMREMGTDGYSDSehylpMEGQTRAASMPRLPAENQRRRGRPRgnDLSTISDTSPMKRSASVlgpkaRRLDDYSL 2180
Cdd:COG5180 89 PKSSPDTPEEQLGAPAGD-----LLVLPAAKTPELAAGALPAPAAAAA--LPKAKVTREATSASAGV-----ALAAALLQ 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2181 ERVPPEEnqryhQRRRDRGHRTSERSLGRYTDVDTG-LGTDLSMTTQSGDLPSKDRDQDRGRPKDrkhRPHHHHHHHHHH 2259
Cdd:COG5180 157 RSDPILA-----KDPDGDSASTLPPPAEKLDKVLTEpRDALKDSPEKLDRPKVEVKDEAQEEPPD---LTGGADHPRPEA 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2260 PPAPDRDRYAQERPDTGRARAREQRWSRSPSEGREhtthrqgSSSVSGSPAPSTSGTSTPRRGRRQLPQTPCTPRPLVSY 2339
Cdd:COG5180 229 ASSPKVDPPSTSEARSRPATVDAQPEMRPPADAKE-------RRRAAIGDTPAAEPPGLPVLEAGSEPQSDAPEAETARP 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2340 SPAPRRPAARRMAGPAAPPGGSPRGCRRAPRWPAHAPEGPRPRGADYTEPDSPREPPGGAHDPAPRSPRTPRAA------ 2413
Cdd:COG5180 302 IDVKGVASAPPATRPVRPPGGARDPGTPRPGQPTERPAGVPEAASDAGQPPSAYPPAEEAVPGKPLEQGAPRPGssggdg 381
|
410 420 430
....*....|....*....|....*....|....*...
gi 568955987 2414 -------GCASPRHGRRLPNGYYAGHGAPRPRTARRGA 2444
Cdd:COG5180 382 apfqppnGAPQPGLGRRGAPGPPMGAGDLVQAALDGGG 419
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
893-1275 |
5.55e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 48.78 E-value: 5.55e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 893 PTPYARPLRPDVKTHLDRPlVVDPQENR-------NNNTNKSRAPEALRP-TARPRESARDPDARRAWPGSPERAPGREG 964
Cdd:PHA03247 2571 PRPAPRPSEPAVTSRARRP-DAPPQSARprapvddRGDPRGPAPPSPLPPdTHAPDPPPPSPSPAANEPDPHPPPTVPPP 2649
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 965 PYGRESEPQQREHAPPREHAPWDAdterAKAGDAPRRHTHR---------------PVAEGEPRRHRARRRPGDEPDDRP 1029
Cdd:PHA03247 2650 ERPRDDPAPGRVSRPRRARRLGRA----AQASSPPQRPRRRaarptvgsltsladpPPPPPTPEPAPHALVSATPLPPGP 2725
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 1030 ERRPRPRDATR-----PARAADGEGDDGERKRRHRH---GPPAHDDrerrhrrrkenqgSGVPVSGPNLSTTRPIQQDLG 1101
Cdd:PHA03247 2726 AAARQASPALPaapapPAVPAGPATPGGPARPARPPttaGPPAPAP-------------PAAPAAGPPRRLTRPAVASLS 2792
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 1102 --RQDLPLAEDLDNMKNNKL------------ATGEP----ASPHDSLGHSGLPPSPAKIGNSTNPG------------- 1150
Cdd:PHA03247 2793 esRESLPSPWDPADPPAAVLapaaalppaaspAGPLPpptsAQPTAPPPPPGPPPPSLPLGGSVAPGgdvrrrppsrspa 2872
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 1151 --PALATNP------QNAASRRTPNNPGNPSNPGPPKTPenslivtnPSSTQPNSAKTARKPEHMAVEIPPacPPLNHTV 1222
Cdd:PHA03247 2873 akPAAPARPpvrrlaRPAVSRSTESFALPPDQPERPPQP--------QAPPPPQPQPQPPPPPQPQPPPPP--PPRPQPP 2942
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 568955987 1223 VQVNKNANPDPLPKKEEEKKEEEEADPGEDG------PKPMPPYSSMfiLSTTNPLRRL 1275
Cdd:PHA03247 2943 LAPTTDPAGAGEPSGAVPQPWLGALVPGRVAvprfrvPQPAPSREAP--ASSTPPLTGH 2999
|
|
| Pro-rich |
pfam15240 |
Proline-rich protein; This family includes several eukaryotic proline-rich proteins. |
2288-2437 |
1.09e-04 |
|
Proline-rich protein; This family includes several eukaryotic proline-rich proteins.
Pssm-ID: 464580 [Multi-domain] Cd Length: 167 Bit Score: 45.03 E-value: 1.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2288 SPSEGREHTTHRQGSSSVSGSPAPSTSGTSTPRRGrrqlPQTPCTPRPLVSyspaprrpaarrMAGPAAPPGGSPRGcrR 2367
Cdd:pfam15240 15 SAQSSSEDVSQEDSPSLISEEEGQSQQGGQGPQGP----PPGGFPPQPPAS------------DDPPGPPPPGGPQQ--P 76
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2368 APRWPAHAPEGPRPRGADYTEPDSPREPPGGAHDPAPRSPRTPRAAGcaSPRHGRRLPNGYYAGHGAPRP 2437
Cdd:pfam15240 77 PPQGGKQKPQGPPPQGGPRPPPGKPQGPPPQGGNQQQGPPPPGKPQG--PPPQGGGPPPQGGNQQGPPPP 144
|
|
| PLN03223 |
PLN03223 |
Polycystin cation channel protein; Provisional |
719-812 |
9.48e-03 |
|
Polycystin cation channel protein; Provisional
Pssm-ID: 215637 [Multi-domain] Cd Length: 1634 Bit Score: 41.47 E-value: 9.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 719 ALLGMQLFGGQFnfdegtppTNFDTFPAAIMTVFQILTGeDWNEVMYDgIKSQGGVQGgMVFSIYFIVLTLFGNYTLLNV 798
Cdd:PLN03223 1345 AFIGHVIFGNAS--------VHFSDMTDSINSLFENLLG-DITYFNED-LKNLTGLQF-VVGMIYFYSYNIFVFMILFNF 1413
|
90
....*....|....*...
gi 568955987 799 FLAIAVDNL----ANAQE 812
Cdd:PLN03223 1414 LLAIICDAFgevkANAAE 1431
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1604-1861 |
2.64e-71 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 239.09 E-value: 2.64e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 1604 SPPFEYTIMAMIALNTIVLMMKFYGAS-VAYENALRVFNIVFTSLFSLECVLKVMAFGI-LNYFRDAWNIFDFVTVLGSI 1681
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPeEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFkKRYFRSPWNILDFVVVLPSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 1682 TDILVTEFGNnFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIGIDGE 1761
Cdd:pfam00520 81 ISLVLSSVGS-LSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKTWE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 1762 DedsdedefQITEHNNFRTFFQALMLLFRSATGEAWHNIMLSCLSGKpcdknsgiltadcGNEFAYFYFVSFIFLCSFLM 1841
Cdd:pfam00520 160 N--------PDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGK-------------GEFWAYIYFVSFIILGGFLL 218
|
250 260
....*....|....*....|
gi 568955987 1842 LNLFVAVIMDNFEYLTRDSS 1861
Cdd:pfam00520 219 LNLFIAVIIDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
188-462 |
6.42e-68 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 229.46 E-value: 6.42e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 188 WPPFEYMILATIIANCIVLALEQHLPDDDKTPmsERLDDTEPYFIGIFCFEAGIKIVALGFAFHkgsYLRNGWNVMDFVV 267
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEEPLT--TVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVV 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 268 VLTGILATVGTE----FDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILIFAIIGLEFYMGKF 343
Cdd:pfam00520 76 VLPSLISLVLSSvgslSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 344 HTtcfeegtddiqgespapcgteepartcpngtkcqpyWEGPNNGITQFDNILFAVLTVFQCITMEGWTDLLYNSNDASG 423
Cdd:pfam00520 156 KT------------------------------------WENPDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKG 199
|
250 260 270
....*....|....*....|....*....|....*....
gi 568955987 424 NTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVE 462
Cdd:pfam00520 200 EFWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
577-815 |
7.77e-57 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 197.87 E-value: 7.77e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 577 QAFYWTVLSLVALNTLCVAIVHYNQPEW-LSDFLYYAEFIFLGLFMSEMFIKMYGLG-TRPYFHSSFNCFDCGVIIGSIF 654
Cdd:pfam00520 2 RYFELFILLLILLNTIFLALETYFQPEEpLTTVLEILDYVFTGIFTLEMLLKIIAAGfKKRYFRSPWNILDFVVVLPSLI 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 655 EVIWAVIKPGtsFGISVLRALRLLRIFKVTKYWASLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFDE 734
Cdd:pfam00520 82 SLVLSSVGSL--SGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKTWE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 735 G--TPPTNFDTFPAAIMTVFQILTGEDWNEVMYDGIKSqggvQGGMVFSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQE 812
Cdd:pfam00520 160 NpdNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDG----KGEFWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTE 235
|
...
gi 568955987 813 LTK 815
Cdd:pfam00520 236 RTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1283-1514 |
2.70e-56 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 196.33 E-value: 2.70e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 1283 RYFEMCILMVIAMSSIALAAEDPVQPNAPRNNVLRYFDYVFTGVFTFEMVIKMIDLGLVLHqgaYFRDLWNILDFIVVSG 1362
Cdd:pfam00520 2 RYFELFILLLILLNTIFLALETYFQPEEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVVVLP 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 1363 ALVAFAFTGNSKGKDINtikSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIVYMLFMFIFAVVAVQLFKGKF 1442
Cdd:pfam00520 79 SLISLVLSSVGSLSGLR---VLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKL 155
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568955987 1443 fhctdeskeferdcrgkyllyeKNEVKARDREWkkyefHYDNVLWALLTLFTVSTGEGWPQVLKHSVDATFE 1514
Cdd:pfam00520 156 ----------------------KTWENPDNGRT-----NFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKGE 200
|
|
| Ca_chan_IQ |
pfam08763 |
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular ... |
1933-2010 |
9.09e-35 |
|
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular calcium entry in response to changes in membrane potential. The isoleucine-glutamine (IQ) motif in the voltage gated calcium channel IQ domain interacts with hydrophobic pockets of Ca2+/calmodulin. The interaction regulates two self-regulatory calcium dependent feedback mechanism, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF).
Pssm-ID: 462591 Cd Length: 77 Bit Score: 128.10 E-value: 9.09e-35
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568955987 1933 NSTLMALIRTALDIKIAKGGaDKQQMDAELRKEMMAIWPNLSQKTLDLLVTPHKSTDLTVGKIYAAMMIMEYYRQSKA 2010
Cdd:pfam08763 1 TATLFALIRTSLKIKLAPAG-EMDQADAELRKIIKKIWPRLSQKTLDLLVPPPSDDEMTVGKIYAALLIQDYYRQNKA 77
|
|
| GPHH |
pfam16905 |
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in ... |
1870-1923 |
1.67e-28 |
|
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in this short domain on voltage-dependent L-type calcium channel proteins in eukaryotes. The domain is closely associated with the IQ-domain, pfam08763.
Pssm-ID: 465306 Cd Length: 54 Bit Score: 109.66 E-value: 1.67e-28
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 568955987 1870 EYVRVWAEYDPAAWGRMPYPDMYQMLRHMSPPLGLGKKCPARVAYKRLLRMDLP 1923
Cdd:pfam16905 1 EFVRVWAEYDPAATGRISYQDMYELLRRISPPLGFGKKCPARVAYKRLVRMNMP 54
|
|
| Ca_chan_IQ |
smart01062 |
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular ... |
1988-2018 |
9.94e-11 |
|
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular calcium entry in response to changes in membrane potential. The isoleucine-glutamine (IQ) motif in the voltage gated calcium channel IQ domain interacts with hydrophobic pockets of Ca2+/calmodulin. The interaction regulates two self-regulatory calcium dependent feedback mechanism, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF).
Pssm-ID: 198130 Cd Length: 31 Bit Score: 58.39 E-value: 9.94e-11
10 20 30
....*....|....*....|....*....|.
gi 568955987 1988 TDLTVGKIYAAMMIMEYYRQSKAKKLQAMRE 2018
Cdd:smart01062 1 DELTVGKIYAAMLIQDYFRQFKSRKEQELLG 31
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2038-2452 |
2.17e-10 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 66.73 E-value: 2.17e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2038 EGGPSQNALPSTQLDPGGGLMAHEGGMKESPSWVtqrAQEMFQKTGTWSPERGPPIDMPNSQPNSQSVEMREMGTDGYSd 2117
Cdd:PHA03307 16 EGGEFFPRPPATPGDAADDLLSGSQGQLVSDSAE---LAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWS- 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2118 sehylpmEGQTRAASMPRLPAENQRRRGRPRGNDlSTISDTSPMKRSASVLGPKARRldDYSLERVPPEENQRYH-QRRR 2196
Cdd:PHA03307 92 -------LSTLAPASPAREGSPTPPGPSSPDPPP-PTPPPASPPPSPAPDLSEMLRP--VGSPGPPPAASPPAAGaSPAA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2197 DRGHRTSERSLGRYTDVDtglgtdlSMTTQSGDLPSKDR--DQDRGRPKDRkhrphhhhHHHHHHPPAPDRDRYAQERPD 2274
Cdd:PHA03307 162 VASDAASSRQAALPLSSP-------EETARAPSSPPAEPppSTPPAAASPR--------PPRRSSPISASASSPAPAPGR 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2275 TGRARAREQRWSRSPSEGREhtthrQGSSSVSGSPAPSTSGTSTPRRGRRQLPQTPCTPRPLVSYSPAPRRPaarrmAGP 2354
Cdd:PHA03307 227 SAADDAGASSSDSSSSESSG-----CGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRE-----RSP 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2355 AAPPGGSPRGCRRAPRWPAHAPEGPRPRGADYTEPDSPRE-----PPGGAHDPAPRSPRTPRAAGCASPR---HGRRLPN 2426
Cdd:PHA03307 297 SPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSrgaavSPGPSPSRSPSPSRPPPPADPSSPRkrpRPSRAPS 376
|
410 420
....*....|....*....|....*.
gi 568955987 2427 GYYAGHGAPRPRTARRGAHDAYSESE 2452
Cdd:PHA03307 377 SPAASAGRPTRRRARAAVAGRARRRD 402
|
|
| PKD_channel |
pfam08016 |
Polycystin cation channel; This family contains the cation channel region from group II of ... |
1643-1854 |
5.90e-10 |
|
Polycystin cation channel; This family contains the cation channel region from group II of Transient receptor potential (TRP) channels, the TRPP subfamily, including PKD1, PKD2, PKD2L and mucolipin proteins.
Pssm-ID: 462341 [Multi-domain] Cd Length: 225 Bit Score: 61.91 E-value: 5.90e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 1643 VFTSLFSLECVLKVMAFGiLNYFRDAWNIFDFVTVLGSITDILvtefgnnfinLSFLRLFRAARLIKLLRQ--------- 1713
Cdd:pfam08016 19 VFFLYFVVEEILKIRKHR-PSYLRSVWNLLDLAIVILSVVLIV----------LNIYRDFLADRLIKSVEAspvtfidfd 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 1714 -----GYTIRIL-----------LWTFVQSFK-----------ALPYVC---LLIAMLFFIYAIIGMQVFGNigidgede 1763
Cdd:pfam08016 88 rvaqlDNLYRIIlaflvfltwlkLFKVLRFNKtmslftktlsrAWKDLAgfaLMFVIFFFAYAQFGYLLFGT-------- 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 1764 dsdedefqitEHNNFRTFFQALMLLFRSATG-EAWHNImlsclsgKPCDKNSGILtadcgnefayfYFVSFIFLCSFLML 1842
Cdd:pfam08016 160 ----------QAPNFSNFVKSILTLFRTILGdFGYNEI-------FSGNRVLGPL-----------LFLTFVFLVIFILL 211
|
250
....*....|..
gi 568955987 1843 NLFVAVIMDNFE 1854
Cdd:pfam08016 212 NLFLAIINDSYV 223
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2033-2437 |
4.42e-08 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 59.03 E-value: 4.42e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2033 PSPTQEGGPSQNALPSTQLDPGGGLMAHEGGMKESPSW------VTQRAQEMFQKTGTWSPERGPP-IDMPNSQPNSQSV 2105
Cdd:PHA03307 53 VTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWslstlaPASPAREGSPTPPGPSSPDPPPpTPPPASPPPSPAP 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2106 EMREMGTDGYSDSEhylPMEGQTRAASMPRLPAENQRRRGRPRGNDLSTISDTSPMKRSASV-LGPKARRLDDYSLERVP 2184
Cdd:PHA03307 133 DLSEMLRPVGSPGP---PPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAePPPSTPPAAASPRPPRR 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2185 PEENQRYHQRRRDRGHRTSERSLGRYTDVDT---GLGTDLSMTTQSGDlPSKDRDQDRGRPKDRKHRPHHHHHHHHHHPP 2261
Cdd:PHA03307 210 SSPISASASSPAPAPGRSAADDAGASSSDSSsseSSGCGWGPENECPL-PRPAPITLPTRIWEASGWNGPSSRPGPASSS 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2262 APDRDRYAQERPDTGRARAREQRWSRSPSEGREHTThrQGSSSVSGSPAPSTSGTSTPRRGRRqlPQTPCTPRPlvsysp 2341
Cdd:PHA03307 289 SSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRES--SSSSTSSSSESSRGAAVSPGPSPSR--SPSPSRPPP------ 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2342 aprrpaarrmAGPAAPPGGSPRGCRRAPRWPAHAPEGPRPR-GADYTEPDSPREPPGGAhdPAPRSPRTPRAAGCASPRH 2420
Cdd:PHA03307 359 ----------PADPSSPRKRPRPSRAPSSPAASAGRPTRRRaRAAVAGRARRRDATGRF--PAGRPRPSPLDAGAASGAF 426
|
410 420
....*....|....*....|
gi 568955987 2421 GRRLPNGYYAGH---GAPRP 2437
Cdd:PHA03307 427 YARYPLLTPSGEpwpGSPPP 446
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2266-2452 |
3.73e-07 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 55.95 E-value: 3.73e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2266 DRYAQERPDTGRARAREQRWSRSPSEGREHTTHRQGSSSVSGSPAPSTSGTSTPrrGRRQLPQTPCTPRPlvsyspaprr 2345
Cdd:PHA03307 793 EAAFRRPGRLRRSGPAADAASRTASKRKSRSHTPDGGSESSGPARPPGAAARPP--PARSSESSKSKPAA---------- 860
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2346 paarrmagPAAPPGGSPRGCRRAPRWPAHAPEGPRPRGADYTEPDSPrePPGGAHDPAPRSPRTPRAAGCASPRHG-RRL 2424
Cdd:PHA03307 861 --------AGGRARGKNGRRRPRPPEPRARPGAAAPPKAAAAAPPAG--APAPRPRPAPRVKLGPMPPGGPDPRGGfRRV 930
|
170 180
....*....|....*....|....*...
gi 568955987 2425 PNGYYagHGaPRPRTArrgAHDAYSESE 2452
Cdd:PHA03307 931 PPGDL--HT-PAPSAA---ALAAYCPPE 952
|
|
| PBP1 |
COG5180 |
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification]; ... |
2028-2444 |
4.70e-07 |
|
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification];
Pssm-ID: 444064 [Multi-domain] Cd Length: 548 Bit Score: 55.07 E-value: 4.70e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2028 QRMEPPSPTQEGG-PSQNALPSTQLDPGGGLMAHEGGMKESPSWV------TQRAQEMFQKTGTWSPERGPPidmpnSQP 2100
Cdd:COG5180 14 TVPIPPNAARPVLsPELWAAANNDAVSQGDRSALASSPTRPYARKifepldIKLALGKPQLPSVAEPEAYLD-----PAP 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2101 NSQSVEMREMGTDGYSDSehylpMEGQTRAASMPRLPAENQRRRGRPRgnDLSTISDTSPMKRSASVlgpkaRRLDDYSL 2180
Cdd:COG5180 89 PKSSPDTPEEQLGAPAGD-----LLVLPAAKTPELAAGALPAPAAAAA--LPKAKVTREATSASAGV-----ALAAALLQ 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2181 ERVPPEEnqryhQRRRDRGHRTSERSLGRYTDVDTG-LGTDLSMTTQSGDLPSKDRDQDRGRPKDrkhRPHHHHHHHHHH 2259
Cdd:COG5180 157 RSDPILA-----KDPDGDSASTLPPPAEKLDKVLTEpRDALKDSPEKLDRPKVEVKDEAQEEPPD---LTGGADHPRPEA 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2260 PPAPDRDRYAQERPDTGRARAREQRWSRSPSEGREhtthrqgSSSVSGSPAPSTSGTSTPRRGRRQLPQTPCTPRPLVSY 2339
Cdd:COG5180 229 ASSPKVDPPSTSEARSRPATVDAQPEMRPPADAKE-------RRRAAIGDTPAAEPPGLPVLEAGSEPQSDAPEAETARP 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2340 SPAPRRPAARRMAGPAAPPGGSPRGCRRAPRWPAHAPEGPRPRGADYTEPDSPREPPGGAHDPAPRSPRTPRAA------ 2413
Cdd:COG5180 302 IDVKGVASAPPATRPVRPPGGARDPGTPRPGQPTERPAGVPEAASDAGQPPSAYPPAEEAVPGKPLEQGAPRPGssggdg 381
|
410 420 430
....*....|....*....|....*....|....*...
gi 568955987 2414 -------GCASPRHGRRLPNGYYAGHGAPRPRTARRGA 2444
Cdd:COG5180 382 apfqppnGAPQPGLGRRGAPGPPMGAGDLVQAALDGGG 419
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
2302-2451 |
3.60e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 53.02 E-value: 3.60e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2302 SSSVSGSPAPSTSGTSTPRRGRRQLPQTPCTPRPlvsyspaPRRPAARRMAGPAAPPGGSPRGCRRAPRWPAHAPEGPRP 2381
Cdd:PHA03247 2544 ASDDAGDPPPPLPPAAPPAAPDRSVPPPRPAPRP-------SEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSP 2616
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2382 RGADYTEPDSPrePPGGAhdPAPRSPRTPRAAGCASPRHGRRLPngyyAGHGAPRPRTARRGAHDAYSES 2451
Cdd:PHA03247 2617 LPPDTHAPDPP--PPSPS--PAANEPDPHPPPTVPPPERPRDDP----APGRVSRPRRARRLGRAAQASS 2678
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
2262-2417 |
3.92e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 52.63 E-value: 3.92e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2262 APDRDRYAQERPDTGRARAREQRWSRSPSEGREHTTHRQGSSsvsgsPAPSTSGTSTPRRGRRQL--------------- 2326
Cdd:PHA03247 2628 PPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARR-----LGRAAQASSPPQRPRRRAarptvgsltsladpp 2702
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2327 --PQTP-CTPRPLVSYSPAPRRPAARRMAGPAAPPGGSPRGCRRAPRWPA-HAPEGPRPRGADYTEPDSPREPPGGahdP 2402
Cdd:PHA03247 2703 ppPPTPePAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGgPARPARPPTTAGPPAPAPPAAPAAG---P 2779
|
170
....*....|....*
gi 568955987 2403 APRSPRTPRAAGCAS 2417
Cdd:PHA03247 2780 PRRLTRPAVASLSES 2794
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2262-2455 |
7.79e-06 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 51.71 E-value: 7.79e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2262 APDRDRYAQERPDTGRARAREQRWSRSPSEGREHTTHRQGSSSVSGSPAPST-SGTSTPRRGRRQLPQTPCTPRPLVSYS 2340
Cdd:PHA03307 79 APANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPaPDLSEMLRPVGSPGPPPAASPPAAGAS 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2341 PAPRRPAARR---------MAGPAAPPGGSPRGCRRAPRWPAHAPEGPRPRG---ADYTEPDSPRePPGGAHDPAPRSP- 2407
Cdd:PHA03307 159 PAAVASDAASsrqaalplsSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSspiSASASSPAPA-PGRSAADDAGASSs 237
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568955987 2408 --RTPRAAGCAS--------PRHGR-RLPNGYYAGHGA--PRPRTARRGAHDAYSESEDDW 2455
Cdd:PHA03307 238 dsSSSESSGCGWgpenecplPRPAPiTLPTRIWEASGWngPSSRPGPASSSSSPRERSPSP 298
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2262-2440 |
1.55e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 50.55 E-value: 1.55e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2262 APDRDRYAQERPDTGRARAREQRWSRSPsEGREHTTHRQGSSSVSGSPAPSTSGTSTPRrgRRQLPQTPCTPRPLvsysp 2341
Cdd:PHA03307 847 PARSSESSKSKPAAAGGRARGKNGRRRP-RPPEPRARPGAAAPPKAAAAAPPAGAPAPR--PRPAPRVKLGPMPP----- 918
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2342 aprrpaarrmAGPAappggsPRGC-RRAPRWPAHAPEGPRPRGADYTEP-------DSPREPPggAHDPAPRspRTPR-- 2411
Cdd:PHA03307 919 ----------GGPD------PRGGfRRVPPGDLHTPAPSAAALAAYCPPevvaelvDHPLFPE--PWRPALA--FDPEal 978
|
170 180 190
....*....|....*....|....*....|..
gi 568955987 2412 ---AAGCASPRHGRRLPNGYYAGHGAPRPRTA 2440
Cdd:PHA03307 979 aeiAARCGGPPPRSGSAFGPLRASGPLRRRAA 1010
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2272-2455 |
2.98e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 49.60 E-value: 2.98e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2272 RPDTGRARAREQRWSRSPSEGREHTTHR-QGSSSVSGSPAPSTSGTSTPRRGRRQLPQTPCTPRPLVSYSPAPRRPAARR 2350
Cdd:PRK07764 587 VVGPAPGAAGGEGPPAPASSGPPEEAARpAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGG 666
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2351 MAGPAAPPGGSPRGCRRAPRWPAHAPEGPRPRGADYTEPdSPREPPGGAHDPAPRSPRTPRAAGCASPRHGRRLPNGYYA 2430
Cdd:PRK07764 667 DGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAP-AATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEP 745
|
170 180
....*....|....*....|....*
gi 568955987 2431 GHGAPRPRTARRGAHDAYSESEDDW 2455
Cdd:PRK07764 746 DDPPDPAGAPAQPPPPPAPAPAAAP 770
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
893-1275 |
5.55e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 48.78 E-value: 5.55e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 893 PTPYARPLRPDVKTHLDRPlVVDPQENR-------NNNTNKSRAPEALRP-TARPRESARDPDARRAWPGSPERAPGREG 964
Cdd:PHA03247 2571 PRPAPRPSEPAVTSRARRP-DAPPQSARprapvddRGDPRGPAPPSPLPPdTHAPDPPPPSPSPAANEPDPHPPPTVPPP 2649
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 965 PYGRESEPQQREHAPPREHAPWDAdterAKAGDAPRRHTHR---------------PVAEGEPRRHRARRRPGDEPDDRP 1029
Cdd:PHA03247 2650 ERPRDDPAPGRVSRPRRARRLGRA----AQASSPPQRPRRRaarptvgsltsladpPPPPPTPEPAPHALVSATPLPPGP 2725
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 1030 ERRPRPRDATR-----PARAADGEGDDGERKRRHRH---GPPAHDDrerrhrrrkenqgSGVPVSGPNLSTTRPIQQDLG 1101
Cdd:PHA03247 2726 AAARQASPALPaapapPAVPAGPATPGGPARPARPPttaGPPAPAP-------------PAAPAAGPPRRLTRPAVASLS 2792
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 1102 --RQDLPLAEDLDNMKNNKL------------ATGEP----ASPHDSLGHSGLPPSPAKIGNSTNPG------------- 1150
Cdd:PHA03247 2793 esRESLPSPWDPADPPAAVLapaaalppaaspAGPLPpptsAQPTAPPPPPGPPPPSLPLGGSVAPGgdvrrrppsrspa 2872
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 1151 --PALATNP------QNAASRRTPNNPGNPSNPGPPKTPenslivtnPSSTQPNSAKTARKPEHMAVEIPPacPPLNHTV 1222
Cdd:PHA03247 2873 akPAAPARPpvrrlaRPAVSRSTESFALPPDQPERPPQP--------QAPPPPQPQPQPPPPPQPQPPPPP--PPRPQPP 2942
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 568955987 1223 VQVNKNANPDPLPKKEEEKKEEEEADPGEDG------PKPMPPYSSMfiLSTTNPLRRL 1275
Cdd:PHA03247 2943 LAPTTDPAGAGEPSGAVPQPWLGALVPGRVAvprfrvPQPAPSREAP--ASSTPPLTGH 2999
|
|
| PHA03381 |
PHA03381 |
tegument protein VP22; Provisional |
2287-2423 |
6.62e-05 |
|
tegument protein VP22; Provisional
Pssm-ID: 177618 [Multi-domain] Cd Length: 290 Bit Score: 47.31 E-value: 6.62e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2287 RSPSEgREHTTHRQGS----SSVSGSPAPSTSGTSTPR-RGRRQLPQTPCTPRPLVSYSPAPRRPAARRMAGPAAPPGGS 2361
Cdd:PHA03381 5 RSPRP-KPHGTDEVEAdvyyDFISPDASPARVSFEEPAdRARRGAGQARGRSQAERRFHHYDEARADYPYYTGSSSEDER 83
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568955987 2362 PRGCRRaPRWPAHAPEGPRP---RGAdyTEPDSPREPPGGAHDPAPRSPRTPRAagcASPRHGRR 2423
Cdd:PHA03381 84 PADPRP-SRRPHAQPEASGPgpaRGA--RGPAGSRGRGRRAESPSPRDPPNPKG---ASAPRGRK 142
|
|
| PRK12678 |
PRK12678 |
transcription termination factor Rho; Provisional |
869-1061 |
1.04e-04 |
|
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 47.59 E-value: 1.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 869 TSEMRKQNLLAS-REALYG---DAAERWPTPYARPLRPDVKTHLDRPLVVDPQENRnnNTNKSRAPEALRPTARPRESAR 944
Cdd:PRK12678 43 TSGMRKGELIAAiKEARGGgaaAAAATPAAPAAAARRAARAAAAARQAEQPAAEAA--AAKAEAAPAARAAAAAAAEAAS 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 945 DPDARRAWPGSPERAPGREGPYGRESEPQQREHAPPREHApwDADTERAKAGDAPRRHTHRPVAEGEPrrhrarrRPGDE 1024
Cdd:PRK12678 121 APEAAQARERRERGEAARRGAARKAGEGGEQPATEARADA--AERTEEEERDERRRRGDREDRQAEAE-------RGERG 191
|
170 180 190
....*....|....*....|....*....|....*..
gi 568955987 1025 PDDRPERRPRPRDATRPARAADGEGDDGERKRRHRHG 1061
Cdd:PRK12678 192 RREERGRDGDDRDRRDRREQGDRREERGRRDGGDRRG 228
|
|
| Pro-rich |
pfam15240 |
Proline-rich protein; This family includes several eukaryotic proline-rich proteins. |
2288-2437 |
1.09e-04 |
|
Proline-rich protein; This family includes several eukaryotic proline-rich proteins.
Pssm-ID: 464580 [Multi-domain] Cd Length: 167 Bit Score: 45.03 E-value: 1.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2288 SPSEGREHTTHRQGSSSVSGSPAPSTSGTSTPRRGrrqlPQTPCTPRPLVSyspaprrpaarrMAGPAAPPGGSPRGcrR 2367
Cdd:pfam15240 15 SAQSSSEDVSQEDSPSLISEEEGQSQQGGQGPQGP----PPGGFPPQPPAS------------DDPPGPPPPGGPQQ--P 76
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2368 APRWPAHAPEGPRPRGADYTEPDSPREPPGGAHDPAPRSPRTPRAAGcaSPRHGRRLPNGYYAGHGAPRP 2437
Cdd:pfam15240 77 PPQGGKQKPQGPPPQGGPRPPPGKPQGPPPQGGNQQQGPPPPGKPQG--PPPQGGGPPPQGGNQQGPPPP 144
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2272-2442 |
1.10e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 47.86 E-value: 1.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2272 RPDTGRARAREQRWS------RSPSE--------GREHTTHRQGSSSVSGSPAPSTSGTSTPRRGRRQLPQTPCTPRPL- 2336
Cdd:PHA03307 738 RYSPRRARARASAWDitdalfSNPSLvpaklaeaLALLEPAEPQRGAGSSPPVRAEAAFRRPGRLRRSGPAADAASRTAs 817
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2337 VSYSPAPRRPAARRMAGPAAPPG--GSPRGCRRAP-RWPAHAPEGPRPRGADYTEPDSPREP---------PGGAHDPAP 2404
Cdd:PHA03307 818 KRKSRSHTPDGGSESSGPARPPGaaARPPPARSSEsSKSKPAAAGGRARGKNGRRRPRPPEPrarpgaaapPKAAAAAPP 897
|
170 180 190
....*....|....*....|....*....|....*...
gi 568955987 2405 RSPRTPRAAGCASPRHGRRLPNGyyaghgaPRPRTARR 2442
Cdd:PHA03307 898 AGAPAPRPRPAPRVKLGPMPPGG-------PDPRGGFR 928
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
2311-2444 |
5.13e-04 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 45.44 E-value: 5.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2311 PSTSGTSTPRR-----GRRQLPqtPCTPRPlvsyspaprrpaarrMAGPAAPPGGS--PRGCRRAPRWPAHAPEGPRPRG 2383
Cdd:PHA03378 676 PSPTGANTMLPiqwapGTMQPP--PRAPTP---------------MRPPAAPPGRAqrPAAATGRARPPAAAPGRARPPA 738
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 568955987 2384 ADYTEPDSPREPPGGAHDP--APRSPRTPRAA-GCASPRHGRRLPngyyaghgaPRPRTARRGA 2444
Cdd:PHA03378 739 AAPGRARPPAAAPGRARPPaaAPGRARPPAAApGAPTPQPPPQAP---------PAPQQRPRGA 793
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2351-2452 |
6.33e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 45.36 E-value: 6.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2351 MAGPAAPPGGSPRGCRRAPRWPAHAPEGPRPRGADytePDSPREPPGGAHDPAPRSPRTPRAAGCASPRHGRRLPNGyyA 2430
Cdd:PRK07764 387 VAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAA---APAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAA--A 461
|
90 100
....*....|....*....|..
gi 568955987 2431 GHGAPRPRTARRGAHDAYSESE 2452
Cdd:PRK07764 462 PSAQPAPAPAAAPEPTAAPAPA 483
|
|
| PHA03381 |
PHA03381 |
tegument protein VP22; Provisional |
2351-2444 |
9.78e-04 |
|
tegument protein VP22; Provisional
Pssm-ID: 177618 [Multi-domain] Cd Length: 290 Bit Score: 43.85 E-value: 9.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2351 MAGPAAPPGGSPRGCRRAPRWPAHA-PEGPR------PRGADY-------TEPDSPREPP--------GGAHDP----AP 2404
Cdd:PHA03381 29 DASPARVSFEEPADRARRGAGQARGrSQAERrfhhydEARADYpyytgssSEDERPADPRpsrrphaqPEASGPgparGA 108
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 568955987 2405 RSPRTPRAAGCASPRHGRRLPNgyyAGHGAPRPRtARRGA 2444
Cdd:PHA03381 109 RGPAGSRGRGRRAESPSPRDPP---NPKGASAPR-GRKSA 144
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2262-2419 |
1.20e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 44.21 E-value: 1.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2262 APDRDRYAQERPDTGRARAREQRWSRSPSEGREHTTHRQGSSSVSGSPAPSTSGTSTPRRGRRQ-LPQTPCTPRPLVSYS 2340
Cdd:PRK07764 635 APAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPaQPAPAPAATPPAGQA 714
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568955987 2341 PAPRRPAARRMAGPAAPPGGSPRGcrraPRWPAHAPEGPRPRGADYTEPDSPREPPGGAhdPAPRSPRTPRAAGCASPR 2419
Cdd:PRK07764 715 DDPAAQPPQAAQGASAPSPAADDP----VPLPPEPDDPPDPAGAPAQPPPPPAPAPAAA--PAAAPPPSPPSEEEEMAE 787
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2352-2444 |
2.21e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 43.44 E-value: 2.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2352 AGPAAPPGGSPRGCRRAPRWPAHAPE---GPRPRGADYTEPDSPREPPGGAHDPAPRSPRTPRAAGCASP-RHGRRLPNG 2427
Cdd:PRK07764 405 APAAAPAPAAAAPAAAAAPAPAAAPQpapAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPePTAAPAPAP 484
|
90
....*....|....*..
gi 568955987 2428 YYAGHGAPRPRTARRGA 2444
Cdd:PRK07764 485 PAAPAPAAAPAAPAAPA 501
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
878-1263 |
3.09e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 43.00 E-value: 3.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 878 LASREAlyGDAAERWPtPYARPLRPDVKTHLDRPlvvdpqenrnnntnksrAPEALRPTARPREsaRDPDARrAWPGSPe 957
Cdd:PHA03247 2543 LASDDA--GDPPPPLP-PAAPPAAPDRSVPPPRP-----------------APRPSEPAVTSRA--RRPDAP-PQSARP- 2598
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 958 RAPGreGPYGRESEPQQREHAPPREHAPWDADTERAKAGDAPrrhthrpvaeGEPRRHRARRRPGDEPDDRPERRPRPRD 1037
Cdd:PHA03247 2599 RAPV--DDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEP----------DPHPPPTVPPPERPRDDPAPGRVSRPRR 2666
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 1038 ATRPARAADGEGDdgERKRRHRHGPPAHddrerrhrrrkenqgsgvpvsGPNLSTTRPIQQDlgrqdlplaedldnmknn 1117
Cdd:PHA03247 2667 ARRLGRAAQASSP--PQRPRRRAARPTV---------------------GSLTSLADPPPPP------------------ 2705
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 1118 klATGEPAsPHDSLGHSGLPPSPAKIGNSTNPGPALATNPQNAASRRTPNNPGNPSNPGPPKTPENSLIVTNPSSTQPns 1197
Cdd:PHA03247 2706 --PTPEPA-PHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPP-- 2780
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568955987 1198 AKTARKPEHMAVEIPPACP----PLNHTVVQVNKNA--NPDPLPKKEEEKKEEEEADPGEDGPKPMPPYSSM 1263
Cdd:PHA03247 2781 RRLTRPAVASLSESRESLPspwdPADPPAAVLAPAAalPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPL 2852
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2352-2444 |
3.19e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 43.05 E-value: 3.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2352 AGPAAPPGGSPRGCRRAPRWPAHAPEGPRPRGADYTEPDSPREPPGGAHDPAPRSPRTPRAAGcASPRHGRRLPNGYYAG 2431
Cdd:PRK07764 586 AVVGPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVA-APEHHPKHVAVPDASD 664
|
90
....*....|...
gi 568955987 2432 HGAPRPRTARRGA 2444
Cdd:PRK07764 665 GGDGWPAKAGGAA 677
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
2242-2443 |
3.97e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 43.00 E-value: 3.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2242 PKDRKHRPHHHHHHHHHHPPAPDRDRYAQ-----ERPDTGRARAREQRWSrSPSEGREHTTHRQGSSSVSGS-------- 2308
Cdd:PHA03247 2628 PPSPSPAANEPDPHPPPTVPPPERPRDDPapgrvSRPRRARRLGRAAQAS-SPPQRPRRRAARPTVGSLTSLadpppppp 2706
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2309 -----PAPSTSGTSTP---RRGRRQLPQTPCTPRP------LVSYSPAPRRPAARRMAG------PAAPPGGSPRGCRRA 2368
Cdd:PHA03247 2707 tpepaPHALVSATPLPpgpAAARQASPALPAAPAPpavpagPATPGGPARPARPPTTAGppapapPAAPAAGPPRRLTRP 2786
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2369 PRWPAHAPEGPRPRGADYTEPDSPREPPGGA----HDPAPRSPRTPRAAGCASPRHGRRLPNGYYAGHG-APRPRTARRG 2443
Cdd:PHA03247 2787 AVASLSESRESLPSPWDPADPPAAVLAPAAAlppaASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSvAPGGDVRRRP 2866
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2272-2454 |
4.07e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 42.67 E-value: 4.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2272 RPDTGRARAREQRWSRSPSEGREHTTHRQGSSSVSGSPAPSTSGTSTPRRGRRQLPQTPCTPRPLVSYSPAPRRPAARRM 2351
Cdd:PRK07764 601 PAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAA 680
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2352 AGPAAPPGGSPRGCRRA-------PRWPAHAPEGPRPRGADYTEPDSPREPPGGAHDPAPRsPRTPRAAGCASPrhgrrl 2424
Cdd:PRK07764 681 PPPAPAPAAPAAPAGAApaqpapaPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPL-PPEPDDPPDPAG------ 753
|
170 180 190
....*....|....*....|....*....|
gi 568955987 2425 PNGYYAGHGAPRPRTARRGAHDAYSESEDD 2454
Cdd:PRK07764 754 APAQPPPPPAPAPAAAPAAAPPPSPPSEEE 783
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
2286-2411 |
4.49e-03 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 42.37 E-value: 4.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2286 SRSPSEGREHTTHRQGSSSVSGSPA----PST--------SGTSTPRRGRRqlPQTPCTPRPLVSYSPaprrpaarrmag 2353
Cdd:PTZ00449 540 SDEPKEGGKPGETKEGEVGKKPGPAkehkPSKiptlskkpEFPKDPKHPKD--PEEPKKPKRPRSAQR------------ 605
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568955987 2354 PAAPPggSPR-----GCRRAPRWPaHAPEGPRpRGADYTEPDSPREPPGGAHDPAPRSPRTPR 2411
Cdd:PTZ00449 606 PTRPK--SPKlpellDIPKSPKRP-ESPKSPK-RPPPPQRPSSPERPEGPKIIKSPKPPKSPK 664
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
2086-2425 |
5.02e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 42.62 E-value: 5.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2086 SPERGPPIDMPNSQPNSQSVEMREMGTDgysdsehyLPMEGQTraasmPRLPAENqrrRGRPRGNDLSTIS--DTSPMKR 2163
Cdd:PHA03247 2563 APDRSVPPPRPAPRPSEPAVTSRARRPD--------APPQSAR-----PRAPVDD---RGDPRGPAPPSPLppDTHAPDP 2626
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2164 SASVLGPKARRLDD-YSLERVPPEENQRYHQRRRDRGHRTSeRSLGRytdvdtglGTDLSMTTQsGDLPSKDRD-----Q 2237
Cdd:PHA03247 2627 PPPSPSPAANEPDPhPPPTVPPPERPRDDPAPGRVSRPRRA-RRLGR--------AAQASSPPQ-RPRRRAARPtvgslT 2696
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2238 DRGRPKDRKHRPHHHHHHHHHHPPAPdrdryaqERPDTGRARAREQRWSRSPSEGREHTTHRQGSSSVSGSPAPSTSGTS 2317
Cdd:PHA03247 2697 SLADPPPPPPTPEPAPHALVSATPLP-------PGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAP 2769
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2318 TPRRGRRQLPQtPCTPRPLV-----------SYSPAPRRPAARRMAGPAAPPGGSPRGCRRAPRWPAHAPEGPRPrgady 2386
Cdd:PHA03247 2770 APPAAPAAGPP-RRLTRPAVaslsesreslpSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPP----- 2843
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 568955987 2387 tEPDSPREPPGGAHDP----APRSPRTPRAAGCASPRH--GRRLP 2425
Cdd:PHA03247 2844 -GPPPPSLPLGGSVAPggdvRRRPPSRSPAAKPAAPARppVRRLA 2887
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
2289-2418 |
5.78e-03 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 41.98 E-value: 5.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2289 PSEGREHTTHRQGSSSVSGSPAPSTSGTSTPRR---GRRQLPQTPCTPRPLVSySPAPRRPAARRMAGPAAPPGGSPRGC 2365
Cdd:PHA03378 676 PSPTGANTMLPIQWAPGTMQPPPRAPTPMRPPAappGRAQRPAAATGRARPPA-AAPGRARPPAAAPGRARPPAAAPGRA 754
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 568955987 2366 RRaprwPAHAPEGPRPRGADYTEPdSPREPPGGAhdPAPRspRTPRAAGCASP 2418
Cdd:PHA03378 755 RP----PAAAPGRARPPAAAPGAP-TPQPPPQAP--PAPQ--QRPRGAPTPQP 798
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2269-2419 |
6.48e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 41.90 E-value: 6.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2269 AQERPDTGRARAREQRWSRSPSEGREHTTHRQGSSSVSGSPAPSTSGTSTPRRGRRQLPQTPCTPRPlvSYSPAPRRPAA 2348
Cdd:PRK07764 626 APAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAA--PAGAAPAQPAP 703
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568955987 2349 RRMAGPAAPPGGSPRGcrrAPRWPAHAPEGPRPRGADY----TEPDSPREPPGGAHDPAPRSPRTPRAAGCASPR 2419
Cdd:PRK07764 704 APAATPPAGQADDPAA---QPPQAAQGASAPSPAADDPvplpPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPP 775
|
|
| dnaA |
PRK14086 |
chromosomal replication initiator protein DnaA; |
2279-2437 |
8.00e-03 |
|
chromosomal replication initiator protein DnaA;
Pssm-ID: 237605 [Multi-domain] Cd Length: 617 Bit Score: 41.35 E-value: 8.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2279 RAREQRWSRSPSEGREHTTHRQGSSSVSGSPAPSTSGTSTPRRGRRQLPQTPCT-PRPLVSYSPAPRRPAARRMAGPAAP 2357
Cdd:PRK14086 104 RTSEPELPRPGRRPYEGYGGPRADDRPPGLPRQDQLPTARPAYPAYQQRPEPGAwPRAADDYGWQQQRLGFPPRAPYASP 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 2358 PGGSPRGCRRAPRWPAHAPEGPRPR------GADYTEP-----DSPREPPGGAHDPApRSPRTPRAAGCASPRHGRRLPn 2426
Cdd:PRK14086 184 ASYAPEQERDREPYDAGRPEYDQRRrdydhpRPDWDRPrrdrtDRPEPPPGAGHVHR-GGPGPPERDDAPVVPIRPSAP- 261
|
170
....*....|.
gi 568955987 2427 GYYAGHGAPRP 2437
Cdd:PRK14086 262 GPLAAQPAPAP 272
|
|
| PKD_channel |
pfam08016 |
Polycystin cation channel; This family contains the cation channel region from group II of ... |
605-802 |
8.85e-03 |
|
Polycystin cation channel; This family contains the cation channel region from group II of Transient receptor potential (TRP) channels, the TRPP subfamily, including PKD1, PKD2, PKD2L and mucolipin proteins.
Pssm-ID: 462341 [Multi-domain] Cd Length: 225 Bit Score: 40.34 E-value: 8.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 605 LSDFLYYAEFIFLGL---FMSEMFIKmYGLGTRPYFHSSFNCFDCGVIIGSIFEVIWAVIKPG----------------T 665
Cdd:pfam08016 6 RSLFILLCEIVFVVFflyFVVEEILK-IRKHRPSYLRSVWNLLDLAIVILSVVLIVLNIYRDFladrliksveaspvtfI 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 666 SFG------------ISVLRALRLLRIFKVTKYWASLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFnfd 733
Cdd:pfam08016 85 DFDrvaqldnlyriiLAFLVFLTWLKLFKVLRFNKTMSLFTKTLSRAWKDLAGFALMFVIFFFAYAQFGYLLFGTQA--- 161
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568955987 734 egtppTNFDTFPAAIMTVFQILTG-EDWNEVMYdgiksqggvqGGMVFSI-YFIVLTLFGNYTLLNVFLAI 802
Cdd:pfam08016 162 -----PNFSNFVKSILTLFRTILGdFGYNEIFS----------GNRVLGPlLFLTFVFLVIFILLNLFLAI 217
|
|
| PLN03223 |
PLN03223 |
Polycystin cation channel protein; Provisional |
719-812 |
9.48e-03 |
|
Polycystin cation channel protein; Provisional
Pssm-ID: 215637 [Multi-domain] Cd Length: 1634 Bit Score: 41.47 E-value: 9.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955987 719 ALLGMQLFGGQFnfdegtppTNFDTFPAAIMTVFQILTGeDWNEVMYDgIKSQGGVQGgMVFSIYFIVLTLFGNYTLLNV 798
Cdd:PLN03223 1345 AFIGHVIFGNAS--------VHFSDMTDSINSLFENLLG-DITYFNED-LKNLTGLQF-VVGMIYFYSYNIFVFMILFNF 1413
|
90
....*....|....*...
gi 568955987 799 FLAIAVDNL----ANAQE 812
Cdd:PLN03223 1414 LLAIICDAFgevkANAAE 1431
|
|
|