|
Name |
Accession |
Description |
Interval |
E-value |
| SLC5-6-like_sbd super family |
cl00456 |
Solute carrier families 5 and 6-like; solute binding domain; This superfamily includes the ... |
6-381 |
1.19e-52 |
|
Solute carrier families 5 and 6-like; solute binding domain; This superfamily includes the solute-binding domain of SLC5 proteins (also called the sodium/glucose cotransporters or solute sodium symporters), SLC6 proteins (also called the sodium- and chloride-dependent neurotransmitter transporters or Na+/Cl--dependent transporters), and nucleobase-cation-symport-1 (NCS1) transporters. SLC5s co-transport Na+ with sugars, amino acids, inorganic ions or vitamins. SLC6s include Na+/Cl--dependent plasma membrane transporters for the monoamine neurotransmitters serotonin, dopamine, and norepinephrine, and the amino acid neurotransmitters GABA and glycine. NCS1s are essential components of salvage pathways for nucleobases and related metabolites; their known substrates include allantoin, uracil, thiamine, and nicotinamide riboside. Members of this superfamily are important in human physiology and disease. They contain a functional core of 10 transmembrane helices (TMs): an inverted structural repeat, TMs1-5 and TMs6-10; TMs numbered to conform to the SLC6 Aquifex aeolicus LeuT. The actual alignment was detected with superfamily member pfam01490:
Pssm-ID: 444915 Cd Length: 410 Bit Score: 190.59 E-value: 1.19e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 6 TSKWGLITNVVNSIVGVSVLTMPFCFKQCGIVLGALLLVFCSWMTHQSCMFLVKSA-----SLSKRRTYAGLAFHAYGKA 80
Cdd:pfam01490 3 ISAWQAVFNLINAIIGAGVLSLPYAFKQLGWIPGLILLLIVGLISLYTAHLLVRCSkevpvTGKRNKSYGDLGYRLLGPK 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 81 GKMLVETSMIGLMLGSCITFYVVIGDLGSNFFAPLLGlqvTRTVRVFLLFAVSLFIVLPLSLQRNMMA-SIQS-FSAMAL 158
Cdd:pfam01490 83 GRLLILFAILLNLFGVCISYLIFAGDNLPAIFDSFFD---TCPISLVYFIIIFGLIFIPLSFIPNLSAlSILSlLAAVSS 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 159 LFYTVFMFVIVLSSLKHGLFSGQWLRQVSYIRWEGVFRCVPIFGMSFACQSQVLPTYDSLDEPSV-KTMSSIFASSLNVV 237
Cdd:pfam01490 160 LYYIVILVLSVAEGIVLTAQGVGHLGSKTNIKLAGTFLAIGIIVFAFEGHAVLLPIQNEMKNPSKfKAMTKILLTAIIIA 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 238 TAFYVMVGFFGYVSFTDATTGNVLIHFP-SNPVTEMIRVGFVMSVAVGFPMMILPCRQALNTLLFEQQqkdgTFAAGGYM 316
Cdd:pfam01490 240 TVLYILIGLVGYLAFGDNVKGNILLNLPkSAWLIDIANLLLVLHVILSFPLQLFPIRQIVENLLFRKE----APFGASGK 315
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568975961 317 PP----LRFKVLTLSVVFGTMVGGVMIPNVETILGFTGATMGSLICFICPALIYKKAHKNAPSAQVVLW 381
Cdd:pfam01490 316 NNpkskLLRVVIRSGLVVITYLIAISVPFFGDLLSLVGATSCAPLSFILPPLFHLKLKKTKKKSQEKLW 384
|
|
| PTZ00121 super family |
cl31754 |
MAEBL; Provisional |
407-788 |
1.25e-07 |
|
MAEBL; Provisional The actual alignment was detected with superfamily member PTZ00121:
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 56.30 E-value: 1.25e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 407 QEARSGHRGDAEGAMKVEAARLSVQdpvVVVAEDSQ--EKLKPAEDKEVLEQAQIKGPVDVPGGEAPKEKQEA------- 477
Cdd:PTZ00121 1258 EEARMAHFARRQAAIKAEEARKADE---LKKAEEKKkaDEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAkkkadaa 1334
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 478 ---AQLDRPGQGIAVPMGEAHRHEPPIPHDKVVVDEGQDQEgpeEKKPPPRLPDEGDPAGRGQGAPPLPESEKEK----- 549
Cdd:PTZ00121 1335 kkkAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEE---AKKKADAAKKKAEEKKKADEAKKKAEEDKKKadelk 1411
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 550 ---QEPERGGEGKRPGQVLAVGEtEHPQKVPEANGQPPVQPRKEDSRPGNRDPQPAAQARDSVELKALA-----ADDGR- 620
Cdd:PTZ00121 1412 kaaAAKKKADEAKKKAEEKKKAD-EAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAeeakkADEAKk 1490
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 621 --EPAQKAGGALWKPVESAAESDAGGKAGLPVQRPEAAEQREKKEAEQQGGDQAGSKLEEETFHGFLlclssiclsmgRT 698
Cdd:PTZ00121 1491 kaEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEEL-----------KK 1559
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 699 AEIKKLVAEAGRAEMLDHAVLLQVIQEQQVQQKRLLD-------------------QQEKLLA----VIEEQHKEIRQQR 755
Cdd:PTZ00121 1560 AEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEvmklyeeekkmkaeeakkaEEAKIKAeelkKAEEEKKKVEQLK 1639
|
410 420 430
....*....|....*....|....*....|....
gi 568975961 756 QEGEEDKPKPD-VQPEPGVAVLRgQEEEAEHAGE 788
Cdd:PTZ00121 1640 KKEAEEKKKAEeLKKAEEENKIK-AAEEAKKAEE 1672
|
|
| PTZ00449 super family |
cl33186 |
104 kDa microneme/rhoptry antigen; Provisional |
731-990 |
5.66e-05 |
|
104 kDa microneme/rhoptry antigen; Provisional The actual alignment was detected with superfamily member PTZ00449:
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 47.38 E-value: 5.66e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 731 KRLLDQQEKLLAVIEEQHKEIRQQRQEGEEDKPKPDVQPEpgvavlrGQEEEAEHAGETLGDDPSQ----PLQPVLGAPR 806
Cdd:PTZ00449 486 KKLIKKSKKKLAPIEEEDSDKHDEPPEGPEASGLPPKAPG-------DKEGEEGEHEDSKESDEPKeggkPGETKEGEVG 558
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 807 GRPAPSQdmgQHLPGEVKVLPGRdladlPAGGSETEPQGAPIDLR--EDPKAAIKAAGAGKELVPGDLEAVHKAAPPEVP 884
Cdd:PTZ00449 559 KKPGPAK---EHKPSKIPTLSKK-----PEFPKDPKHPKDPEEPKkpKRPRSAQRPTRPKSPKLPELLDIPKSPKRPESP 630
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 885 KSPEKQVAKavagQRqdvfgEGSEERKETGKEAMAPGA-DTQKEAVQPLVGAEAKDTKSRQSGPTKAPVQTQA------- 956
Cdd:PTZ00449 631 KSPKRPPPP----QR-----PSSPERPEGPKIIKSPKPpKSPKPPFDPKFKEKFYDDYLDAAAKSKETKTTVVldesfes 701
|
250 260 270
....*....|....*....|....*....|....*..
gi 568975961 957 ---KFHPEPQAIFDTGQGSHPEVRSEAPRAVHIPPEE 990
Cdd:PTZ00449 702 ilkETLPETPGTPFTTPRPLPPKLPRDEEFPFEPIGD 738
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| Aa_trans |
pfam01490 |
Transmembrane amino acid transporter protein; This transmembrane region is found in many amino ... |
6-381 |
1.19e-52 |
|
Transmembrane amino acid transporter protein; This transmembrane region is found in many amino acid transporters including UNC-47 and MTR. UNC-47 encodes a vesicular amino butyric acid (GABA) transporter, (VGAT). UNC-47 is predicted to have 10 transmembrane domains. MTR is a N system amino acid transporter system protein involved in methyltryptophan resistance. Other members of this family include proline transporters and amino acid permeases.
Pssm-ID: 279788 Cd Length: 410 Bit Score: 190.59 E-value: 1.19e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 6 TSKWGLITNVVNSIVGVSVLTMPFCFKQCGIVLGALLLVFCSWMTHQSCMFLVKSA-----SLSKRRTYAGLAFHAYGKA 80
Cdd:pfam01490 3 ISAWQAVFNLINAIIGAGVLSLPYAFKQLGWIPGLILLLIVGLISLYTAHLLVRCSkevpvTGKRNKSYGDLGYRLLGPK 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 81 GKMLVETSMIGLMLGSCITFYVVIGDLGSNFFAPLLGlqvTRTVRVFLLFAVSLFIVLPLSLQRNMMA-SIQS-FSAMAL 158
Cdd:pfam01490 83 GRLLILFAILLNLFGVCISYLIFAGDNLPAIFDSFFD---TCPISLVYFIIIFGLIFIPLSFIPNLSAlSILSlLAAVSS 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 159 LFYTVFMFVIVLSSLKHGLFSGQWLRQVSYIRWEGVFRCVPIFGMSFACQSQVLPTYDSLDEPSV-KTMSSIFASSLNVV 237
Cdd:pfam01490 160 LYYIVILVLSVAEGIVLTAQGVGHLGSKTNIKLAGTFLAIGIIVFAFEGHAVLLPIQNEMKNPSKfKAMTKILLTAIIIA 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 238 TAFYVMVGFFGYVSFTDATTGNVLIHFP-SNPVTEMIRVGFVMSVAVGFPMMILPCRQALNTLLFEQQqkdgTFAAGGYM 316
Cdd:pfam01490 240 TVLYILIGLVGYLAFGDNVKGNILLNLPkSAWLIDIANLLLVLHVILSFPLQLFPIRQIVENLLFRKE----APFGASGK 315
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568975961 317 PP----LRFKVLTLSVVFGTMVGGVMIPNVETILGFTGATMGSLICFICPALIYKKAHKNAPSAQVVLW 381
Cdd:pfam01490 316 NNpkskLLRVVIRSGLVVITYLIAISVPFFGDLLSLVGATSCAPLSFILPPLFHLKLKKTKKKSQEKLW 384
|
|
| PTZ00206 |
PTZ00206 |
amino acid transporter; Provisional |
14-366 |
1.80e-25 |
|
amino acid transporter; Provisional
Pssm-ID: 240313 Cd Length: 467 Bit Score: 111.50 E-value: 1.80e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 14 NVVNSIVGVSVLTMPFCFKQCGIVLGALLLVFCSWMTHQSCMFLVKSASLSKRRTYAGLAFHAYGKAGKMLVETSMIGLM 93
Cdd:PTZ00206 68 NIASSTVGAGIVGLPSAANSSGLVMAMIYLIIITAMTIFSIYALGVAADKTNIRTYEGVARVLLGPWGSYYVAATRAFHG 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 94 LGSCITFYVVIGDLGSnffAPLLGLQV-----TRTVRVFLLFAVSLFIVLPLSLQRNMmASIQSFSAMALLFYTVFMFVI 168
Cdd:PTZ00206 148 FSACVAYVISVGDILS---ATLKGTNApdflkQKSGNRLLTSLMWLCFMLPLVIPRHI-DSLRYVSTIAVSFMVYLVIVI 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 169 VLSSLKHGLfsGQWLRQVSY--------IRWEGVFRCVP---IFGMSFACQSQVLPTYDSLDEPSVKTMSSIFASSLNVV 237
Cdd:PTZ00206 224 VVHSCMNGL--PENIKNVSVgkddnaeiILFNSGNRAIEglgVFIFAYVFQITAYEVYMDMTNRSVGKFVLASTIAMGMC 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 238 TAFYVMVGFFGYVSFTDATTGNVLIHFpsNPVTE-MIRVGFV---MSVAVGFPMMILPCRQALNTLLFEQQQKDGTFAAG 313
Cdd:PTZ00206 302 FTMYVLTAFFGYMDFGRNVTGSVLLMY--DPVNEpAIMVGFVgvlVKLFVSYALLGMACRNALYDVIGWDARKVAFWKHC 379
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 568975961 314 gympplrFKVLTLSVVFgtMVGGVMIPNVETILGFTGATMGSLICFICPALIY 366
Cdd:PTZ00206 380 -------IAVVTLSVVM--LLCGLFIPKINTVLGFAGSISGGLLGFILPALLF 423
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
407-788 |
1.25e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 56.30 E-value: 1.25e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 407 QEARSGHRGDAEGAMKVEAARLSVQdpvVVVAEDSQ--EKLKPAEDKEVLEQAQIKGPVDVPGGEAPKEKQEA------- 477
Cdd:PTZ00121 1258 EEARMAHFARRQAAIKAEEARKADE---LKKAEEKKkaDEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAkkkadaa 1334
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 478 ---AQLDRPGQGIAVPMGEAHRHEPPIPHDKVVVDEGQDQEgpeEKKPPPRLPDEGDPAGRGQGAPPLPESEKEK----- 549
Cdd:PTZ00121 1335 kkkAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEE---AKKKADAAKKKAEEKKKADEAKKKAEEDKKKadelk 1411
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 550 ---QEPERGGEGKRPGQVLAVGEtEHPQKVPEANGQPPVQPRKEDSRPGNRDPQPAAQARDSVELKALA-----ADDGR- 620
Cdd:PTZ00121 1412 kaaAAKKKADEAKKKAEEKKKAD-EAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAeeakkADEAKk 1490
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 621 --EPAQKAGGALWKPVESAAESDAGGKAGLPVQRPEAAEQREKKEAEQQGGDQAGSKLEEETFHGFLlclssiclsmgRT 698
Cdd:PTZ00121 1491 kaEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEEL-----------KK 1559
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 699 AEIKKLVAEAGRAEMLDHAVLLQVIQEQQVQQKRLLD-------------------QQEKLLA----VIEEQHKEIRQQR 755
Cdd:PTZ00121 1560 AEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEvmklyeeekkmkaeeakkaEEAKIKAeelkKAEEEKKKVEQLK 1639
|
410 420 430
....*....|....*....|....*....|....
gi 568975961 756 QEGEEDKPKPD-VQPEPGVAVLRgQEEEAEHAGE 788
Cdd:PTZ00121 1640 KKEAEEKKKAEeLKKAEEENKIK-AAEEAKKAEE 1672
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
433-601 |
5.44e-05 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 47.07 E-value: 5.44e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 433 PVVVVAEDSQEKLKPAEDK---EVLEQAQIKGPVDVPGGEAPKEKQEAaQLDRPGQGIAvPMGEAHRHE------PPIPH 503
Cdd:NF033839 309 EVKPEPETPKPEVKPQLEKpkpEVKPQPEKPKPEVKPQLETPKPEVKP-QPEKPKPEVK-PQPEKPKPEvkpqpeTPKPE 386
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 504 DKVVVDEGQDQEGPEEKKPPPRL---PDEGDPAGRGQGAPPLPE----SEKEKQEPERGGEGKRPgQVLAVGETEHPQKV 576
Cdd:NF033839 387 VKPQPEKPKPEVKPQPEKPKPEVkpqPEKPKPEVKPQPEKPKPEvkpqPEKPKPEVKPQPEKPKP-EVKPQPETPKPEVK 465
|
170 180
....*....|....*....|....*.
gi 568975961 577 PEANG-QPPVQPRKEDSRPGNRDPQP 601
Cdd:NF033839 466 PQPEKpKPEVKPQPEKPKPDNSKPQA 491
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
731-990 |
5.66e-05 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 47.38 E-value: 5.66e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 731 KRLLDQQEKLLAVIEEQHKEIRQQRQEGEEDKPKPDVQPEpgvavlrGQEEEAEHAGETLGDDPSQ----PLQPVLGAPR 806
Cdd:PTZ00449 486 KKLIKKSKKKLAPIEEEDSDKHDEPPEGPEASGLPPKAPG-------DKEGEEGEHEDSKESDEPKeggkPGETKEGEVG 558
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 807 GRPAPSQdmgQHLPGEVKVLPGRdladlPAGGSETEPQGAPIDLR--EDPKAAIKAAGAGKELVPGDLEAVHKAAPPEVP 884
Cdd:PTZ00449 559 KKPGPAK---EHKPSKIPTLSKK-----PEFPKDPKHPKDPEEPKkpKRPRSAQRPTRPKSPKLPELLDIPKSPKRPESP 630
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 885 KSPEKQVAKavagQRqdvfgEGSEERKETGKEAMAPGA-DTQKEAVQPLVGAEAKDTKSRQSGPTKAPVQTQA------- 956
Cdd:PTZ00449 631 KSPKRPPPP----QR-----PSSPERPEGPKIIKSPKPpKSPKPPFDPKFKEKFYDDYLDAAAKSKETKTTVVldesfes 701
|
250 260 270
....*....|....*....|....*....|....*..
gi 568975961 957 ---KFHPEPQAIFDTGQGSHPEVRSEAPRAVHIPPEE 990
Cdd:PTZ00449 702 ilkETLPETPGTPFTTPRPLPPKLPRDEEFPFEPIGD 738
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
404-678 |
5.18e-03 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 41.13 E-value: 5.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 404 DLTQEARSghRGDAEGAMKVEAARLSVQDPVVVVAEDSQEKLKPAEDKEVLEQAQiKGpvDVPG-GEAPKEKQEAAQLDR 482
Cdd:TIGR00927 629 DLSKGDVA--EAEHTGERTGEEGERPTEAEGENGEESGGEAEQEGETETKGENES-EG--EIPAeRKGEQEGEGEIEAKE 703
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 483 PGQGIAVPMGEAHRHEPPIPHDKVVVDEGQDQEGPEEKKPPPRLPDEGDPAGRGQGAPPLPESEKEKQEPERGGEGKrpG 562
Cdd:TIGR00927 704 ADHKGETEAEEVEHEGETEAEGTEDEGEIETGEEGEEVEDEGEGEAEGKHEVETEGDRKETEHEGETEAEGKEDEDE--G 781
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 563 QVLAVGETEHP----QKVPEANGQPPVQPRKEDSRPGNRDPQPAAQARDSVELKALAADDGREPAQKaggalwkpvESAA 638
Cdd:TIGR00927 782 EIQAGEDGEMKgdegAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQGEAKQD---------EKGV 852
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 568975961 639 ESDAGGKAGLPVQRPEAAEQREKKEAEQQGGDQAGSKLEE 678
Cdd:TIGR00927 853 DGGGGSDGGDSEEEEEEEEEEEEEEEEEEEEEEEEEENEE 892
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| Aa_trans |
pfam01490 |
Transmembrane amino acid transporter protein; This transmembrane region is found in many amino ... |
6-381 |
1.19e-52 |
|
Transmembrane amino acid transporter protein; This transmembrane region is found in many amino acid transporters including UNC-47 and MTR. UNC-47 encodes a vesicular amino butyric acid (GABA) transporter, (VGAT). UNC-47 is predicted to have 10 transmembrane domains. MTR is a N system amino acid transporter system protein involved in methyltryptophan resistance. Other members of this family include proline transporters and amino acid permeases.
Pssm-ID: 279788 Cd Length: 410 Bit Score: 190.59 E-value: 1.19e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 6 TSKWGLITNVVNSIVGVSVLTMPFCFKQCGIVLGALLLVFCSWMTHQSCMFLVKSA-----SLSKRRTYAGLAFHAYGKA 80
Cdd:pfam01490 3 ISAWQAVFNLINAIIGAGVLSLPYAFKQLGWIPGLILLLIVGLISLYTAHLLVRCSkevpvTGKRNKSYGDLGYRLLGPK 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 81 GKMLVETSMIGLMLGSCITFYVVIGDLGSNFFAPLLGlqvTRTVRVFLLFAVSLFIVLPLSLQRNMMA-SIQS-FSAMAL 158
Cdd:pfam01490 83 GRLLILFAILLNLFGVCISYLIFAGDNLPAIFDSFFD---TCPISLVYFIIIFGLIFIPLSFIPNLSAlSILSlLAAVSS 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 159 LFYTVFMFVIVLSSLKHGLFSGQWLRQVSYIRWEGVFRCVPIFGMSFACQSQVLPTYDSLDEPSV-KTMSSIFASSLNVV 237
Cdd:pfam01490 160 LYYIVILVLSVAEGIVLTAQGVGHLGSKTNIKLAGTFLAIGIIVFAFEGHAVLLPIQNEMKNPSKfKAMTKILLTAIIIA 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 238 TAFYVMVGFFGYVSFTDATTGNVLIHFP-SNPVTEMIRVGFVMSVAVGFPMMILPCRQALNTLLFEQQqkdgTFAAGGYM 316
Cdd:pfam01490 240 TVLYILIGLVGYLAFGDNVKGNILLNLPkSAWLIDIANLLLVLHVILSFPLQLFPIRQIVENLLFRKE----APFGASGK 315
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568975961 317 PP----LRFKVLTLSVVFGTMVGGVMIPNVETILGFTGATMGSLICFICPALIYKKAHKNAPSAQVVLW 381
Cdd:pfam01490 316 NNpkskLLRVVIRSGLVVITYLIAISVPFFGDLLSLVGATSCAPLSFILPPLFHLKLKKTKKKSQEKLW 384
|
|
| PTZ00206 |
PTZ00206 |
amino acid transporter; Provisional |
14-366 |
1.80e-25 |
|
amino acid transporter; Provisional
Pssm-ID: 240313 Cd Length: 467 Bit Score: 111.50 E-value: 1.80e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 14 NVVNSIVGVSVLTMPFCFKQCGIVLGALLLVFCSWMTHQSCMFLVKSASLSKRRTYAGLAFHAYGKAGKMLVETSMIGLM 93
Cdd:PTZ00206 68 NIASSTVGAGIVGLPSAANSSGLVMAMIYLIIITAMTIFSIYALGVAADKTNIRTYEGVARVLLGPWGSYYVAATRAFHG 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 94 LGSCITFYVVIGDLGSnffAPLLGLQV-----TRTVRVFLLFAVSLFIVLPLSLQRNMmASIQSFSAMALLFYTVFMFVI 168
Cdd:PTZ00206 148 FSACVAYVISVGDILS---ATLKGTNApdflkQKSGNRLLTSLMWLCFMLPLVIPRHI-DSLRYVSTIAVSFMVYLVIVI 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 169 VLSSLKHGLfsGQWLRQVSY--------IRWEGVFRCVP---IFGMSFACQSQVLPTYDSLDEPSVKTMSSIFASSLNVV 237
Cdd:PTZ00206 224 VVHSCMNGL--PENIKNVSVgkddnaeiILFNSGNRAIEglgVFIFAYVFQITAYEVYMDMTNRSVGKFVLASTIAMGMC 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 238 TAFYVMVGFFGYVSFTDATTGNVLIHFpsNPVTE-MIRVGFV---MSVAVGFPMMILPCRQALNTLLFEQQQKDGTFAAG 313
Cdd:PTZ00206 302 FTMYVLTAFFGYMDFGRNVTGSVLLMY--DPVNEpAIMVGFVgvlVKLFVSYALLGMACRNALYDVIGWDARKVAFWKHC 379
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 568975961 314 gympplrFKVLTLSVVFgtMVGGVMIPNVETILGFTGATMGSLICFICPALIY 366
Cdd:PTZ00206 380 -------IAVVTLSVVM--LLCGLFIPKINTVLGFAGSISGGLLGFILPALLF 423
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
407-788 |
1.25e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 56.30 E-value: 1.25e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 407 QEARSGHRGDAEGAMKVEAARLSVQdpvVVVAEDSQ--EKLKPAEDKEVLEQAQIKGPVDVPGGEAPKEKQEA------- 477
Cdd:PTZ00121 1258 EEARMAHFARRQAAIKAEEARKADE---LKKAEEKKkaDEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAkkkadaa 1334
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 478 ---AQLDRPGQGIAVPMGEAHRHEPPIPHDKVVVDEGQDQEgpeEKKPPPRLPDEGDPAGRGQGAPPLPESEKEK----- 549
Cdd:PTZ00121 1335 kkkAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEE---AKKKADAAKKKAEEKKKADEAKKKAEEDKKKadelk 1411
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 550 ---QEPERGGEGKRPGQVLAVGEtEHPQKVPEANGQPPVQPRKEDSRPGNRDPQPAAQARDSVELKALA-----ADDGR- 620
Cdd:PTZ00121 1412 kaaAAKKKADEAKKKAEEKKKAD-EAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAeeakkADEAKk 1490
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 621 --EPAQKAGGALWKPVESAAESDAGGKAGLPVQRPEAAEQREKKEAEQQGGDQAGSKLEEETFHGFLlclssiclsmgRT 698
Cdd:PTZ00121 1491 kaEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEEL-----------KK 1559
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 699 AEIKKLVAEAGRAEMLDHAVLLQVIQEQQVQQKRLLD-------------------QQEKLLA----VIEEQHKEIRQQR 755
Cdd:PTZ00121 1560 AEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEvmklyeeekkmkaeeakkaEEAKIKAeelkKAEEEKKKVEQLK 1639
|
410 420 430
....*....|....*....|....*....|....
gi 568975961 756 QEGEEDKPKPD-VQPEPGVAVLRgQEEEAEHAGE 788
Cdd:PTZ00121 1640 KKEAEEKKKAEeLKKAEEENKIK-AAEEAKKAEE 1672
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
407-678 |
5.70e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 50.91 E-value: 5.70e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 407 QEARSghrgdAEGAMKVEAARLSVQDPVVVVA---EDSQ--EKLKPAEDKEVLEQA----QIKGPVDVPGGEAPKEKQEA 477
Cdd:PTZ00121 1131 EEARK-----AEDARKAEEARKAEDAKRVEIArkaEDARkaEEARKAEDAKKAEAArkaeEVRKAEELRKAEDARKAEAA 1205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 478 AQLDRPGQGIAVPMGE-AHRHEPPIPHDKVVVDEGQDQEGPEEKKPPP-RLPDEGDPAGRGQGAPPLPESEKEKQEPERG 555
Cdd:PTZ00121 1206 RKAEEERKAEEARKAEdAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEiRKFEEARMAHFARRQAAIKAEEARKADELKK 1285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 556 GEGKRPGQVLAvgETEHPQKVPEANgqppvqprkedsrpgnrdpQPAAQARDSVELKALAaddgrEPAQKAGGALWKPVE 635
Cdd:PTZ00121 1286 AEEKKKADEAK--KAEEKKKADEAK-------------------KKAEEAKKADEAKKKA-----EEAKKKADAAKKKAE 1339
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 568975961 636 SAAESDAGGKAGLPVQRPEAAEQREKKEAEQQGGDQAGSKLEE 678
Cdd:PTZ00121 1340 EAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADA 1382
|
|
| PHA03169 |
PHA03169 |
hypothetical protein; Provisional |
510-672 |
3.76e-05 |
|
hypothetical protein; Provisional
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 47.27 E-value: 3.76e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 510 EGQDQEGPEEKKPPPRLPDEGDPAGRGQGAPPLPESEKEKQEPERGGEGKRPgqvlavGETEhpqkvpEANGQPPVQPRK 589
Cdd:PHA03169 98 ESVGSPTPSPSGSAEELASGLSPENTSGSSPESPASHSPPPSPPSHPGPHEP------APPE------SHNPSPNQQPSS 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 590 EDSRPGNRDPQPAAQArdsvelKALAADDGREPAQKAGGALWKPVESAAESDAGGKAGLPVQRPEAAEQREKKEAEQQGG 669
Cdd:PHA03169 166 FLQPSHEDSPEEPEPP------TSEPEPDSPGPPQSETPTSSPPPQSPPDEPGEPQSPTPQQAPSPNTQQAVEHEDEPTE 239
|
...
gi 568975961 670 DQA 672
Cdd:PHA03169 240 PER 242
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
433-601 |
5.44e-05 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 47.07 E-value: 5.44e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 433 PVVVVAEDSQEKLKPAEDK---EVLEQAQIKGPVDVPGGEAPKEKQEAaQLDRPGQGIAvPMGEAHRHE------PPIPH 503
Cdd:NF033839 309 EVKPEPETPKPEVKPQLEKpkpEVKPQPEKPKPEVKPQLETPKPEVKP-QPEKPKPEVK-PQPEKPKPEvkpqpeTPKPE 386
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 504 DKVVVDEGQDQEGPEEKKPPPRL---PDEGDPAGRGQGAPPLPE----SEKEKQEPERGGEGKRPgQVLAVGETEHPQKV 576
Cdd:NF033839 387 VKPQPEKPKPEVKPQPEKPKPEVkpqPEKPKPEVKPQPEKPKPEvkpqPEKPKPEVKPQPEKPKP-EVKPQPETPKPEVK 465
|
170 180
....*....|....*....|....*.
gi 568975961 577 PEANG-QPPVQPRKEDSRPGNRDPQP 601
Cdd:NF033839 466 PQPEKpKPEVKPQPEKPKPDNSKPQA 491
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
731-990 |
5.66e-05 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 47.38 E-value: 5.66e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 731 KRLLDQQEKLLAVIEEQHKEIRQQRQEGEEDKPKPDVQPEpgvavlrGQEEEAEHAGETLGDDPSQ----PLQPVLGAPR 806
Cdd:PTZ00449 486 KKLIKKSKKKLAPIEEEDSDKHDEPPEGPEASGLPPKAPG-------DKEGEEGEHEDSKESDEPKeggkPGETKEGEVG 558
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 807 GRPAPSQdmgQHLPGEVKVLPGRdladlPAGGSETEPQGAPIDLR--EDPKAAIKAAGAGKELVPGDLEAVHKAAPPEVP 884
Cdd:PTZ00449 559 KKPGPAK---EHKPSKIPTLSKK-----PEFPKDPKHPKDPEEPKkpKRPRSAQRPTRPKSPKLPELLDIPKSPKRPESP 630
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 885 KSPEKQVAKavagQRqdvfgEGSEERKETGKEAMAPGA-DTQKEAVQPLVGAEAKDTKSRQSGPTKAPVQTQA------- 956
Cdd:PTZ00449 631 KSPKRPPPP----QR-----PSSPERPEGPKIIKSPKPpKSPKPPFDPKFKEKFYDDYLDAAAKSKETKTTVVldesfes 701
|
250 260 270
....*....|....*....|....*....|....*..
gi 568975961 957 ---KFHPEPQAIFDTGQGSHPEVRSEAPRAVHIPPEE 990
Cdd:PTZ00449 702 ilkETLPETPGTPFTTPRPLPPKLPRDEEFPFEPIGD 738
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
417-784 |
7.36e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 47.06 E-value: 7.36e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 417 AEGAMKVEAARLSVQDpvvvvAEDSQEKLKPAEDKEVLEQAQIKGPVDVPGGEAPKEKQEA---AQLDRPGQGIAVPMGE 493
Cdd:PTZ00121 1440 AEEAKKADEAKKKAEE-----AKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAkkkADEAKKAAEAKKKADE 1514
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 494 AHRHEPPIPHDKVVVDEGQDQEGPEEKKPPPRLPDEGDPAGRGQGAPPLPESEKEKQEPERGGEGKRPGQVLAVGETEHP 573
Cdd:PTZ00121 1515 AKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARI 1594
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 574 QKVPEANGQPPvQPRKEDSRPGNRDPQPAAQARDSVELKALAADDGREPAQKAGGAlwKPVESAAESDAGGKAGLPVQRP 653
Cdd:PTZ00121 1595 EEVMKLYEEEK-KMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKA--EELKKAEEENKIKAAEEAKKAE 1671
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 654 E---AAEQREKKEAEQQGGDQAGSKLEEETfhgfllclssiclsmGRTAEIKKLVAE-AGRAEMLDHAVLLQVIQEQQVQ 729
Cdd:PTZ00121 1672 EdkkKAEEAKKAEEDEKKAAEALKKEAEEA---------------KKAEELKKKEAEeKKKAEELKKAEEENKIKAEEAK 1736
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 568975961 730 QKRLLDQQEKLLAVIEEQHKEIRQQRQEgEEDKPKPDVQPEPGVAVLRGQEEEAE 784
Cdd:PTZ00121 1737 KEAEEDKKKAEEAKKDEEEKKKIAHLKK-EEEKKAEEIRKEKEAVIEEELDEEDE 1790
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
417-788 |
1.64e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 45.90 E-value: 1.64e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 417 AEGAMKVEAARLSVQDPvvvvAEDSQEKLKPAEDKEVLEQAQIKGPVDVPGGEAPKEKQEAAQLDRPGQGIAvpmgEAHR 496
Cdd:PTZ00121 1387 AEEKKKADEAKKKAEED----KKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAE----EAKK 1458
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 497 HE--PPIPHDKVVVDEGQDQegPEEKKPPPRLPDEGDPAGRGQGAPPLPESEKEKQEPERGGEGKRPGQVLAvgETEHPQ 574
Cdd:PTZ00121 1459 AEeaKKKAEEAKKADEAKKK--AEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAK--KAEEAK 1534
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 575 KVPEANGQPPVQP----RKEDSRPGNRDPQPAAQARDSVELKALAADDGrEPAQKAGGALWKPVESAAESDAGGKAGLPV 650
Cdd:PTZ00121 1535 KADEAKKAEEKKKadelKKAEELKKAEEKKKAEEAKKAEEDKNMALRKA-EEAKKAEEARIEEVMKLYEEEKKMKAEEAK 1613
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 651 QRPEA---AEQREKKEAEQQGGDQAGSKLEEETFHGFLLCLSSICLSMGRTAEIKKLVAEAGRAEMLDHAVllQVIQEQQ 727
Cdd:PTZ00121 1614 KAEEAkikAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAE--EDEKKAA 1691
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568975961 728 VQQKRLLDQQEKllavIEEQHKEIRQQRQEGEEDKPKPDVQPEPGVAVLRGQEEEAEHAGE 788
Cdd:PTZ00121 1692 EALKKEAEEAKK----AEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEE 1748
|
|
| PHA03169 |
PHA03169 |
hypothetical protein; Provisional |
461-628 |
5.04e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 43.81 E-value: 5.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 461 GPVDVPGGEAPKEKQEAAQLDRPGQGIAVPMGEAHRHEPPIPHDkvvvDEGQDQEGPEEKKPPPRlPDEGDPAGRGQGAP 540
Cdd:PHA03169 111 AEELASGLSPENTSGSSPESPASHSPPPSPPSHPGPHEPAPPES----HNPSPNQQPSSFLQPSH-EDSPEEPEPPTSEP 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 541 PlPESEK--EKQEPERGGEGKRPGQVLAVGETEHPQKVPEANGQPPVQPRKEDSRPGNRDPQPAAQARDSVELKalaadd 618
Cdd:PHA03169 186 E-PDSPGppQSETPTSSPPPQSPPDEPGEPQSPTPQQAPSPNTQQAVEHEDEPTEPEREGPPFPGHRSHSYTVV------ 258
|
170
....*....|
gi 568975961 619 GREPAQKAGG 628
Cdd:PHA03169 259 GWKPSTRPGG 268
|
|
| PRK10905 |
PRK10905 |
cell division protein DamX; Validated |
526-646 |
6.11e-04 |
|
cell division protein DamX; Validated
Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 43.39 E-value: 6.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 526 LPDEgdPAG----RGQGAPPlpesEKEKQEPERGGEGKRPGQVLAVGETEHPQKVPEANGQPPVQP--RKEDSRPGNRDP 599
Cdd:PRK10905 123 LPTE--PATvapvRNGNASR----QTAKTQTAERPATTRPARKQAVIEPKKPQATAKTEPKPVAQTpkRTEPAAPVASTK 196
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 568975961 600 QPAAQARDSVELKALAAddgrePAQKAggalwKPVESAAESDAGGKA 646
Cdd:PRK10905 197 APAATSTPAPKETATTA-----PVQTA-----SPAQTTATPAAGGKT 233
|
|
| PHA03418 |
PHA03418 |
hypothetical E4 protein; Provisional |
500-598 |
1.95e-03 |
|
hypothetical E4 protein; Provisional
Pssm-ID: 177646 [Multi-domain] Cd Length: 230 Bit Score: 41.26 E-value: 1.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 500 PIPHDKVVVDEGQDQEGPEEKKPPPRLPDEGD---PAGRGQGAPPLPESEKEK---------QEPERGGEGKRPGQVLAV 567
Cdd:PHA03418 68 PNGHNKPPVTKQPGGEGTEEDHQAPLAADADDdprPGKRSKADEHGPAPGRAAlapfkldldQDPLHGDPDPPPGATGGQ 147
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 568975961 568 GET-----EHPQKVP-----EANGQPPVQPRKEDSRPGNRD 598
Cdd:PHA03418 148 GEEppeggEESQPPLgegegAVEGHPPPLPPAPEPKPHNGD 188
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
420-672 |
2.62e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 41.90 E-value: 2.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 420 AMKVEAARLSVQDPVVVVAEDS---QEKLKPAEDKEVLEQA---------QI-------KGPVDVPGGEAPKEKQEAAQL 480
Cdd:PRK07764 533 ILLPEATVLGVRGDTLVLGFSTgglARRFASPGNAEVLVTAlaeelggdwQVeavvgpaPGAAGGEGPPAPASSGPPEEA 612
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 481 DRPGQGIAVPMGEAHRHEPPIPHDKVVVDEGQDQEGPEEkkPPPRLPDEGDPAGRGQGAPPLPESEKEKQEPERGGEGKR 560
Cdd:PRK07764 613 ARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPE--HHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAP 690
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 561 PGQVLAVGetehPQKVPEANGQPPVQPRkedSRPGNRDPQPAAQARDSVELKALAADDGREPAQKAGGALWKPVESAAES 640
Cdd:PRK07764 691 AAPAGAAP----AQPAPAPAATPPAGQA---DDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPA 763
|
250 260 270
....*....|....*....|....*....|....
gi 568975961 641 DAGGKAGLPVQRPEAAEQREK--KEAEQQGGDQA 672
Cdd:PRK07764 764 PAPAAAPAAAPPPSPPSEEEEmaEDDAPSMDDED 797
|
|
| PHA03169 |
PHA03169 |
hypothetical protein; Provisional |
444-675 |
2.86e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 41.49 E-value: 2.86e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 444 KLKPAEDKEVLEQAQIKGPVDvPGGEAPKEKQEAAQLDRPGQ----GIAVPMGEAHRH-EPPIPHDKVVVDEGQDQ---- 514
Cdd:PHA03169 43 AAKPAPPAPTTSGPQVRAVAE-QGHRQTESDTETAEESRHGEkeerGQGGPSGSGSESvGSPTPSPSGSAEELASGlspe 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 515 -------EGPEEKKPPPRLPDEGDPAGRG-----QGAPPLPESEKEKQEPERGGEGKRPGQVLAVGETEHPQKVPEA-NG 581
Cdd:PHA03169 122 ntsgsspESPASHSPPPSPPSHPGPHEPAppeshNPSPNQQPSSFLQPSHEDSPEEPEPPTSEPEPDSPGPPQSETPtSS 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 582 QPPVQPRKEDSRPGNRDPQ--PAAQARDSVELKALAADDGREPAQKAGGAL--WKPVESAAESDAGGKAGLPVQRPEAAE 657
Cdd:PHA03169 202 PPPQSPPDEPGEPQSPTPQqaPSPNTQQAVEHEDEPTEPEREGPPFPGHRShsYTVVGWKPSTRPGGVPKLCLRCTSHPS 281
|
250
....*....|....*...
gi 568975961 658 QREKKEAEQQGGDQAGSK 675
Cdd:PHA03169 282 HRSRLPEGQQSEDKVPRK 299
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
432-653 |
3.30e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 41.70 E-value: 3.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 432 DPVVVVAEDSQEKLKPAEDKEVLEQAQIKGPVDVPGGEAPKEKQEAAQLDRPGQGIAvPMGEAHRHEPPIPHDkvvvdeg 511
Cdd:PHA03307 52 AVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTP-PGPSSPDPPPPTPPP------- 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 512 qdqEGPEEKKPPPR---LPDEGDPAGRGQGAPPLPESEKEkqEPERGGEGKRPGQVLA--VGETEHPQKVPEANGQPPVQ 586
Cdd:PHA03307 124 ---ASPPPSPAPDLsemLRPVGSPGPPPAASPPAAGASPA--AVASDAASSRQAALPLssPEETARAPSSPPAEPPPSTP 198
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568975961 587 PRKEDSRPGNRDPQPAAQARDSvelkalAADDGREPAQKAGGALWKPVES-AAESDAGGKAGLPVQRP 653
Cdd:PHA03307 199 PAAASPRPPRRSSPISASASSP------APAPGRSAADDAGASSSDSSSSeSSGCGWGPENECPLPRP 260
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
404-678 |
5.18e-03 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 41.13 E-value: 5.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 404 DLTQEARSghRGDAEGAMKVEAARLSVQDPVVVVAEDSQEKLKPAEDKEVLEQAQiKGpvDVPG-GEAPKEKQEAAQLDR 482
Cdd:TIGR00927 629 DLSKGDVA--EAEHTGERTGEEGERPTEAEGENGEESGGEAEQEGETETKGENES-EG--EIPAeRKGEQEGEGEIEAKE 703
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 483 PGQGIAVPMGEAHRHEPPIPHDKVVVDEGQDQEGPEEKKPPPRLPDEGDPAGRGQGAPPLPESEKEKQEPERGGEGKrpG 562
Cdd:TIGR00927 704 ADHKGETEAEEVEHEGETEAEGTEDEGEIETGEEGEEVEDEGEGEAEGKHEVETEGDRKETEHEGETEAEGKEDEDE--G 781
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 563 QVLAVGETEHP----QKVPEANGQPPVQPRKEDSRPGNRDPQPAAQARDSVELKALAADDGREPAQKaggalwkpvESAA 638
Cdd:TIGR00927 782 EIQAGEDGEMKgdegAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQGEAKQD---------EKGV 852
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 568975961 639 ESDAGGKAGLPVQRPEAAEQREKKEAEQQGGDQAGSKLEE 678
Cdd:TIGR00927 853 DGGGGSDGGDSEEEEEEEEEEEEEEEEEEEEEEEEEENEE 892
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
752-998 |
6.48e-03 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 40.79 E-value: 6.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 752 RQQRQEGEEDKPKPDVQPEPGVAvlrgqEEEAEHAGEtlgddPSQPLQPVLGAPRGRPAPsqdmgqhlpgeVKVLPGRDL 831
Cdd:PRK10811 849 RPQDVQVEEQREAEEVQVQPVVA-----EVPVAAAVE-----PVVSAPVVEAVAEVVEEP-----------VVVAEPQPE 907
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 832 ADLPAGGSETEPQGAPIDlrEDPKAAIKAAGAGKELVPGDLEAVHKAAPPEVPKSPEKQVAKAVAGQRQDVFGEGSEERK 911
Cdd:PRK10811 908 EVVVVETTHPEVIAAPVT--EQPQVITESDVAVAQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVA 985
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975961 912 ETgkEAMAPGADTQKEAVQPLVGAEAKDTKSRQSGP-TKAPVqtqakfhpepqaifdtgqgshPEVRSEAPRAVH-IPPE 989
Cdd:PRK10811 986 EV--AAEVETVTAVEPEVAPAQVPEATVEHNHATAPmTRAPA---------------------PEYVPEAPRHSDwQRPT 1042
|
....*....
gi 568975961 990 EQHKGKGGA 998
Cdd:PRK10811 1043 FAFEGKGAA 1051
|
|
|