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Conserved domains on  [gi|568975963|ref|XP_006534350|]
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solute carrier family 38 member 10 isoform X4 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
SLC5-6-like_sbd super family cl00456
Solute carrier families 5 and 6-like; solute binding domain; This superfamily includes the ...
6-381 1.14e-52

Solute carrier families 5 and 6-like; solute binding domain; This superfamily includes the solute-binding domain of SLC5 proteins (also called the sodium/glucose cotransporters or solute sodium symporters), SLC6 proteins (also called the sodium- and chloride-dependent neurotransmitter transporters or Na+/Cl--dependent transporters), and nucleobase-cation-symport-1 (NCS1) transporters. SLC5s co-transport Na+ with sugars, amino acids, inorganic ions or vitamins. SLC6s include Na+/Cl--dependent plasma membrane transporters for the monoamine neurotransmitters serotonin, dopamine, and norepinephrine, and the amino acid neurotransmitters GABA and glycine. NCS1s are essential components of salvage pathways for nucleobases and related metabolites; their known substrates include allantoin, uracil, thiamine, and nicotinamide riboside. Members of this superfamily are important in human physiology and disease. They contain a functional core of 10 transmembrane helices (TMs): an inverted structural repeat, TMs1-5 and TMs6-10; TMs numbered to conform to the SLC6 Aquifex aeolicus LeuT.


The actual alignment was detected with superfamily member pfam01490:

Pssm-ID: 444915  Cd Length: 410  Bit Score: 190.59  E-value: 1.14e-52
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963     6 TSKWGLITNVVNSIVGVSVLTMPFCFKQCGIVLGALLLVFCSWMTHQSCMFLVKSA-----SLSKRRTYAGLAFHAYGKA 80
Cdd:pfam01490    3 ISAWQAVFNLINAIIGAGVLSLPYAFKQLGWIPGLILLLIVGLISLYTAHLLVRCSkevpvTGKRNKSYGDLGYRLLGPK 82
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963    81 GKMLVETSMIGLMLGSCITFYVVIGDLGSNFFAPLLGlqvTRTVRVFLLFAVSLFIVLPLSLQRNMMA-SIQS-FSAMAL 158
Cdd:pfam01490   83 GRLLILFAILLNLFGVCISYLIFAGDNLPAIFDSFFD---TCPISLVYFIIIFGLIFIPLSFIPNLSAlSILSlLAAVSS 159
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963   159 LFYTVFMFVIVLSSLKHGLFSGQWLRQVSYIRWEGVFRCVPIFGMSFACQSQVLPTYDSLDEPSV-KTMSSIFASSLNVV 237
Cdd:pfam01490  160 LYYIVILVLSVAEGIVLTAQGVGHLGSKTNIKLAGTFLAIGIIVFAFEGHAVLLPIQNEMKNPSKfKAMTKILLTAIIIA 239
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963   238 TAFYVMVGFFGYVSFTDATTGNVLIHFP-SNPVTEMIRVGFVMSVAVGFPMMILPCRQALNTLLFEQQqkdgTFAAGGYM 316
Cdd:pfam01490  240 TVLYILIGLVGYLAFGDNVKGNILLNLPkSAWLIDIANLLLVLHVILSFPLQLFPIRQIVENLLFRKE----APFGASGK 315
                          330       340       350       360       370       380
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568975963   317 PP----LRFKVLTLSVVFGTMVGGVMIPNVETILGFTGATMGSLICFICPALIYKKAHKNAPSAQVVLW 381
Cdd:pfam01490  316 NNpkskLLRVVIRSGLVVITYLIAISVPFFGDLLSLVGATSCAPLSFILPPLFHLKLKKTKKKSQEKLW 384
PTZ00121 super family cl31754
MAEBL; Provisional
407-767 2.49e-07

MAEBL; Provisional


The actual alignment was detected with superfamily member PTZ00121:

Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 55.15  E-value: 2.49e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  407 QEARSghrgdAEGAMKVEAARLSVQDPVVVVA---EDSQ--EKLKPAEDKEVLEQA----QIKGPVDVPGGEAPKEKQEA 477
Cdd:PTZ00121 1131 EEARK-----AEDARKAEEARKAEDAKRVEIArkaEDARkaEEARKAEDAKKAEAArkaeEVRKAEELRKAEDARKAEAA 1205
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  478 AQLDRPGQGIAVPMGE-AHRHEPPIPHDKVVVDEGQDQEGPEEKKPPP-RLPDEGDPAGRGQGAPPLPESEKEKQEPERG 555
Cdd:PTZ00121 1206 RKAEEERKAEEARKAEdAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEiRKFEEARMAHFARRQAAIKAEEARKADELKK 1285
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  556 GEGKRPGQVLAvgETEHPQKVPEANgqppvqprkedsrpgnrdpQPAAQARDSVELKALAaddgrEPAQKAGGALWKPVE 635
Cdd:PTZ00121 1286 AEEKKKADEAK--KAEEKKKADEAK-------------------KKAEEAKKADEAKKKA-----EEAKKKADAAKKKAE 1339
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  636 SAAESDAGGKAGLPVQRPEAAEQREKKEAEQQGGDQAGSKLEAEIKKLVAAGRAEMLdhavllqviqeqqvqQKRLLDQQ 715
Cdd:PTZ00121 1340 EAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEA---------------KKKAEEDK 1404
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|..
gi 568975963  716 EKllaviEEQHKEIRQQRQEGEEDKPKPADVQPepgVAVLRGQEEEAEHAGE 767
Cdd:PTZ00121 1405 KK-----ADELKKAAAAKKKADEAKKKAEEKKK---ADEAKKKAEEAKKADE 1448
PTZ00449 super family cl33186
104 kDa microneme/rhoptry antigen; Provisional
709-969 1.11e-04

104 kDa microneme/rhoptry antigen; Provisional


The actual alignment was detected with superfamily member PTZ00449:

Pssm-ID: 185628 [Multi-domain]  Cd Length: 943  Bit Score: 46.61  E-value: 1.11e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  709 KRLLDQQEKLLAVIEEQHKEIRQQRQEGEEDKPKPADVqpePGvavlrGQEEEAEHAGETLGDDPSQ----PLQPVLGAP 784
Cdd:PTZ00449  486 KKLIKKSKKKLAPIEEEDSDKHDEPPEGPEASGLPPKA---PG-----DKEGEEGEHEDSKESDEPKeggkPGETKEGEV 557
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  785 RGRPAPSQdmgQHLPGEVKVLPGRdladlPAGGSETEPQGAPIDLR--EDPKAAIKAAGAGKELVPGDLEAVHKAAPPEV 862
Cdd:PTZ00449  558 GKKPGPAK---EHKPSKIPTLSKK-----PEFPKDPKHPKDPEEPKkpKRPRSAQRPTRPKSPKLPELLDIPKSPKRPES 629
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  863 PKSPEKQVAKavagQRqdvfgEGSEERKETGKEAMAPGA-DTQKEAVQPLVGAEAKDTKSRQSGPTKAPVQTQA------ 935
Cdd:PTZ00449  630 PKSPKRPPPP----QR-----PSSPERPEGPKIIKSPKPpKSPKPPFDPKFKEKFYDDYLDAAAKSKETKTTVVldesfe 700
                         250       260       270
                  ....*....|....*....|....*....|....*...
gi 568975963  936 ----KFHPEPQAIFDTGQGSHPEVRSEAPRAVHIPPEE 969
Cdd:PTZ00449  701 silkETLPETPGTPFTTPRPLPPKLPRDEEFPFEPIGD 738
 
Name Accession Description Interval E-value
Aa_trans pfam01490
Transmembrane amino acid transporter protein; This transmembrane region is found in many amino ...
6-381 1.14e-52

Transmembrane amino acid transporter protein; This transmembrane region is found in many amino acid transporters including UNC-47 and MTR. UNC-47 encodes a vesicular amino butyric acid (GABA) transporter, (VGAT). UNC-47 is predicted to have 10 transmembrane domains. MTR is a N system amino acid transporter system protein involved in methyltryptophan resistance. Other members of this family include proline transporters and amino acid permeases.


Pssm-ID: 279788  Cd Length: 410  Bit Score: 190.59  E-value: 1.14e-52
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963     6 TSKWGLITNVVNSIVGVSVLTMPFCFKQCGIVLGALLLVFCSWMTHQSCMFLVKSA-----SLSKRRTYAGLAFHAYGKA 80
Cdd:pfam01490    3 ISAWQAVFNLINAIIGAGVLSLPYAFKQLGWIPGLILLLIVGLISLYTAHLLVRCSkevpvTGKRNKSYGDLGYRLLGPK 82
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963    81 GKMLVETSMIGLMLGSCITFYVVIGDLGSNFFAPLLGlqvTRTVRVFLLFAVSLFIVLPLSLQRNMMA-SIQS-FSAMAL 158
Cdd:pfam01490   83 GRLLILFAILLNLFGVCISYLIFAGDNLPAIFDSFFD---TCPISLVYFIIIFGLIFIPLSFIPNLSAlSILSlLAAVSS 159
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963   159 LFYTVFMFVIVLSSLKHGLFSGQWLRQVSYIRWEGVFRCVPIFGMSFACQSQVLPTYDSLDEPSV-KTMSSIFASSLNVV 237
Cdd:pfam01490  160 LYYIVILVLSVAEGIVLTAQGVGHLGSKTNIKLAGTFLAIGIIVFAFEGHAVLLPIQNEMKNPSKfKAMTKILLTAIIIA 239
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963   238 TAFYVMVGFFGYVSFTDATTGNVLIHFP-SNPVTEMIRVGFVMSVAVGFPMMILPCRQALNTLLFEQQqkdgTFAAGGYM 316
Cdd:pfam01490  240 TVLYILIGLVGYLAFGDNVKGNILLNLPkSAWLIDIANLLLVLHVILSFPLQLFPIRQIVENLLFRKE----APFGASGK 315
                          330       340       350       360       370       380
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568975963   317 PP----LRFKVLTLSVVFGTMVGGVMIPNVETILGFTGATMGSLICFICPALIYKKAHKNAPSAQVVLW 381
Cdd:pfam01490  316 NNpkskLLRVVIRSGLVVITYLIAISVPFFGDLLSLVGATSCAPLSFILPPLFHLKLKKTKKKSQEKLW 384
PTZ00206 PTZ00206
amino acid transporter; Provisional
14-366 1.75e-25

amino acid transporter; Provisional


Pssm-ID: 240313  Cd Length: 467  Bit Score: 111.50  E-value: 1.75e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963   14 NVVNSIVGVSVLTMPFCFKQCGIVLGALLLVFCSWMTHQSCMFLVKSASLSKRRTYAGLAFHAYGKAGKMLVETSMIGLM 93
Cdd:PTZ00206   68 NIASSTVGAGIVGLPSAANSSGLVMAMIYLIIITAMTIFSIYALGVAADKTNIRTYEGVARVLLGPWGSYYVAATRAFHG 147
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963   94 LGSCITFYVVIGDLGSnffAPLLGLQV-----TRTVRVFLLFAVSLFIVLPLSLQRNMmASIQSFSAMALLFYTVFMFVI 168
Cdd:PTZ00206  148 FSACVAYVISVGDILS---ATLKGTNApdflkQKSGNRLLTSLMWLCFMLPLVIPRHI-DSLRYVSTIAVSFMVYLVIVI 223
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  169 VLSSLKHGLfsGQWLRQVSY--------IRWEGVFRCVP---IFGMSFACQSQVLPTYDSLDEPSVKTMSSIFASSLNVV 237
Cdd:PTZ00206  224 VVHSCMNGL--PENIKNVSVgkddnaeiILFNSGNRAIEglgVFIFAYVFQITAYEVYMDMTNRSVGKFVLASTIAMGMC 301
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  238 TAFYVMVGFFGYVSFTDATTGNVLIHFpsNPVTE-MIRVGFV---MSVAVGFPMMILPCRQALNTLLFEQQQKDGTFAAG 313
Cdd:PTZ00206  302 FTMYVLTAFFGYMDFGRNVTGSVLLMY--DPVNEpAIMVGFVgvlVKLFVSYALLGMACRNALYDVIGWDARKVAFWKHC 379
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|...
gi 568975963  314 gympplrFKVLTLSVVFgtMVGGVMIPNVETILGFTGATMGSLICFICPALIY 366
Cdd:PTZ00206  380 -------IAVVTLSVVM--LLCGLFIPKINTVLGFAGSISGGLLGFILPALLF 423
PTZ00121 PTZ00121
MAEBL; Provisional
407-767 2.49e-07

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 55.15  E-value: 2.49e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  407 QEARSghrgdAEGAMKVEAARLSVQDPVVVVA---EDSQ--EKLKPAEDKEVLEQA----QIKGPVDVPGGEAPKEKQEA 477
Cdd:PTZ00121 1131 EEARK-----AEDARKAEEARKAEDAKRVEIArkaEDARkaEEARKAEDAKKAEAArkaeEVRKAEELRKAEDARKAEAA 1205
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  478 AQLDRPGQGIAVPMGE-AHRHEPPIPHDKVVVDEGQDQEGPEEKKPPP-RLPDEGDPAGRGQGAPPLPESEKEKQEPERG 555
Cdd:PTZ00121 1206 RKAEEERKAEEARKAEdAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEiRKFEEARMAHFARRQAAIKAEEARKADELKK 1285
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  556 GEGKRPGQVLAvgETEHPQKVPEANgqppvqprkedsrpgnrdpQPAAQARDSVELKALAaddgrEPAQKAGGALWKPVE 635
Cdd:PTZ00121 1286 AEEKKKADEAK--KAEEKKKADEAK-------------------KKAEEAKKADEAKKKA-----EEAKKKADAAKKKAE 1339
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  636 SAAESDAGGKAGLPVQRPEAAEQREKKEAEQQGGDQAGSKLEAEIKKLVAAGRAEMLdhavllqviqeqqvqQKRLLDQQ 715
Cdd:PTZ00121 1340 EAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEA---------------KKKAEEDK 1404
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|..
gi 568975963  716 EKllaviEEQHKEIRQQRQEGEEDKPKPADVQPepgVAVLRGQEEEAEHAGE 767
Cdd:PTZ00121 1405 KK-----ADELKKAAAAKKKADEAKKKAEEKKK---ADEAKKKAEEAKKADE 1448
PspC_subgroup_2 NF033839
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...
433-601 9.68e-05

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.


Pssm-ID: 468202 [Multi-domain]  Cd Length: 557  Bit Score: 46.30  E-value: 9.68e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  433 PVVVVAEDSQEKLKPAEDK---EVLEQAQIKGPVDVPGGEAPKEKQEAaQLDRPGQGIAvPMGEAHRHE------PPIPH 503
Cdd:NF033839  309 EVKPEPETPKPEVKPQLEKpkpEVKPQPEKPKPEVKPQLETPKPEVKP-QPEKPKPEVK-PQPEKPKPEvkpqpeTPKPE 386
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  504 DKVVVDEGQDQEGPEEKKPPPRL---PDEGDPAGRGQGAPPLPE----SEKEKQEPERGGEGKRPgQVLAVGETEHPQKV 576
Cdd:NF033839  387 VKPQPEKPKPEVKPQPEKPKPEVkpqPEKPKPEVKPQPEKPKPEvkpqPEKPKPEVKPQPEKPKP-EVKPQPETPKPEVK 465
                         170       180
                  ....*....|....*....|....*.
gi 568975963  577 PEANG-QPPVQPRKEDSRPGNRDPQP 601
Cdd:NF033839  466 PQPEKpKPEVKPQPEKPKPDNSKPQA 491
PTZ00449 PTZ00449
104 kDa microneme/rhoptry antigen; Provisional
709-969 1.11e-04

104 kDa microneme/rhoptry antigen; Provisional


Pssm-ID: 185628 [Multi-domain]  Cd Length: 943  Bit Score: 46.61  E-value: 1.11e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  709 KRLLDQQEKLLAVIEEQHKEIRQQRQEGEEDKPKPADVqpePGvavlrGQEEEAEHAGETLGDDPSQ----PLQPVLGAP 784
Cdd:PTZ00449  486 KKLIKKSKKKLAPIEEEDSDKHDEPPEGPEASGLPPKA---PG-----DKEGEEGEHEDSKESDEPKeggkPGETKEGEV 557
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  785 RGRPAPSQdmgQHLPGEVKVLPGRdladlPAGGSETEPQGAPIDLR--EDPKAAIKAAGAGKELVPGDLEAVHKAAPPEV 862
Cdd:PTZ00449  558 GKKPGPAK---EHKPSKIPTLSKK-----PEFPKDPKHPKDPEEPKkpKRPRSAQRPTRPKSPKLPELLDIPKSPKRPES 629
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  863 PKSPEKQVAKavagQRqdvfgEGSEERKETGKEAMAPGA-DTQKEAVQPLVGAEAKDTKSRQSGPTKAPVQTQA------ 935
Cdd:PTZ00449  630 PKSPKRPPPP----QR-----PSSPERPEGPKIIKSPKPpKSPKPPFDPKFKEKFYDDYLDAAAKSKETKTTVVldesfe 700
                         250       260       270
                  ....*....|....*....|....*....|....*...
gi 568975963  936 ----KFHPEPQAIFDTGQGSHPEVRSEAPRAVHIPPEE 969
Cdd:PTZ00449  701 silkETLPETPGTPFTTPRPLPPKLPRDEEFPFEPIGD 738
2A1904 TIGR00927
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...
505-773 7.05e-03

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273344 [Multi-domain]  Cd Length: 1096  Bit Score: 40.75  E-value: 7.05e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963   505 KVVVDEGQD--QEGPEEKKPPPRLPDEGDPAGRGQGAPPLPESEKEKQEPERGGEGKRPGQVLAVGETEHPQKVPEANGQ 582
Cdd:TIGR00927  632 KGDVAEAEHtgERTGEEGERPTEAEGENGEESGGEAEQEGETETKGENESEGEIPAERKGEQEGEGEIEAKEADHKGETE 711
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963   583 PPVQPRKEDSRPGNRDPQPAAQardsvelkalAADDGREPAQKAGGalwkpvESAAESDAGGKAGLPVQRPEAAEQREKK 662
Cdd:TIGR00927  712 AEEVEHEGETEAEGTEDEGEIE----------TGEEGEEVEDEGEG------EAEGKHEVETEGDRKETEHEGETEAEGK 775
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963   663 EAEQQGGDQAGS----KLEAEIKKLVAAGRAEMLDHAVLLQVIQEQQVQQKRLLDQQEKlLAVIEEQHKEIRQQRQ---- 734
Cdd:TIGR00927  776 EDEDEGEIQAGEdgemKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGE-QELNAENQGEAKQDEKgvdg 854
                          250       260       270
                   ....*....|....*....|....*....|....*....
gi 568975963   735 EGEEDKPKPADVQPEPGVAVLRGQEEEAEHAGETLGDDP 773
Cdd:TIGR00927  855 GGGSDGGDSEEEEEEEEEEEEEEEEEEEEEEEEEENEEP 893
 
Name Accession Description Interval E-value
Aa_trans pfam01490
Transmembrane amino acid transporter protein; This transmembrane region is found in many amino ...
6-381 1.14e-52

Transmembrane amino acid transporter protein; This transmembrane region is found in many amino acid transporters including UNC-47 and MTR. UNC-47 encodes a vesicular amino butyric acid (GABA) transporter, (VGAT). UNC-47 is predicted to have 10 transmembrane domains. MTR is a N system amino acid transporter system protein involved in methyltryptophan resistance. Other members of this family include proline transporters and amino acid permeases.


Pssm-ID: 279788  Cd Length: 410  Bit Score: 190.59  E-value: 1.14e-52
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963     6 TSKWGLITNVVNSIVGVSVLTMPFCFKQCGIVLGALLLVFCSWMTHQSCMFLVKSA-----SLSKRRTYAGLAFHAYGKA 80
Cdd:pfam01490    3 ISAWQAVFNLINAIIGAGVLSLPYAFKQLGWIPGLILLLIVGLISLYTAHLLVRCSkevpvTGKRNKSYGDLGYRLLGPK 82
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963    81 GKMLVETSMIGLMLGSCITFYVVIGDLGSNFFAPLLGlqvTRTVRVFLLFAVSLFIVLPLSLQRNMMA-SIQS-FSAMAL 158
Cdd:pfam01490   83 GRLLILFAILLNLFGVCISYLIFAGDNLPAIFDSFFD---TCPISLVYFIIIFGLIFIPLSFIPNLSAlSILSlLAAVSS 159
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963   159 LFYTVFMFVIVLSSLKHGLFSGQWLRQVSYIRWEGVFRCVPIFGMSFACQSQVLPTYDSLDEPSV-KTMSSIFASSLNVV 237
Cdd:pfam01490  160 LYYIVILVLSVAEGIVLTAQGVGHLGSKTNIKLAGTFLAIGIIVFAFEGHAVLLPIQNEMKNPSKfKAMTKILLTAIIIA 239
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963   238 TAFYVMVGFFGYVSFTDATTGNVLIHFP-SNPVTEMIRVGFVMSVAVGFPMMILPCRQALNTLLFEQQqkdgTFAAGGYM 316
Cdd:pfam01490  240 TVLYILIGLVGYLAFGDNVKGNILLNLPkSAWLIDIANLLLVLHVILSFPLQLFPIRQIVENLLFRKE----APFGASGK 315
                          330       340       350       360       370       380
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568975963   317 PP----LRFKVLTLSVVFGTMVGGVMIPNVETILGFTGATMGSLICFICPALIYKKAHKNAPSAQVVLW 381
Cdd:pfam01490  316 NNpkskLLRVVIRSGLVVITYLIAISVPFFGDLLSLVGATSCAPLSFILPPLFHLKLKKTKKKSQEKLW 384
PTZ00206 PTZ00206
amino acid transporter; Provisional
14-366 1.75e-25

amino acid transporter; Provisional


Pssm-ID: 240313  Cd Length: 467  Bit Score: 111.50  E-value: 1.75e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963   14 NVVNSIVGVSVLTMPFCFKQCGIVLGALLLVFCSWMTHQSCMFLVKSASLSKRRTYAGLAFHAYGKAGKMLVETSMIGLM 93
Cdd:PTZ00206   68 NIASSTVGAGIVGLPSAANSSGLVMAMIYLIIITAMTIFSIYALGVAADKTNIRTYEGVARVLLGPWGSYYVAATRAFHG 147
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963   94 LGSCITFYVVIGDLGSnffAPLLGLQV-----TRTVRVFLLFAVSLFIVLPLSLQRNMmASIQSFSAMALLFYTVFMFVI 168
Cdd:PTZ00206  148 FSACVAYVISVGDILS---ATLKGTNApdflkQKSGNRLLTSLMWLCFMLPLVIPRHI-DSLRYVSTIAVSFMVYLVIVI 223
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  169 VLSSLKHGLfsGQWLRQVSY--------IRWEGVFRCVP---IFGMSFACQSQVLPTYDSLDEPSVKTMSSIFASSLNVV 237
Cdd:PTZ00206  224 VVHSCMNGL--PENIKNVSVgkddnaeiILFNSGNRAIEglgVFIFAYVFQITAYEVYMDMTNRSVGKFVLASTIAMGMC 301
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  238 TAFYVMVGFFGYVSFTDATTGNVLIHFpsNPVTE-MIRVGFV---MSVAVGFPMMILPCRQALNTLLFEQQQKDGTFAAG 313
Cdd:PTZ00206  302 FTMYVLTAFFGYMDFGRNVTGSVLLMY--DPVNEpAIMVGFVgvlVKLFVSYALLGMACRNALYDVIGWDARKVAFWKHC 379
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|...
gi 568975963  314 gympplrFKVLTLSVVFgtMVGGVMIPNVETILGFTGATMGSLICFICPALIY 366
Cdd:PTZ00206  380 -------IAVVTLSVVM--LLCGLFIPKINTVLGFAGSISGGLLGFILPALLF 423
PTZ00121 PTZ00121
MAEBL; Provisional
407-767 2.49e-07

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 55.15  E-value: 2.49e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  407 QEARSghrgdAEGAMKVEAARLSVQDPVVVVA---EDSQ--EKLKPAEDKEVLEQA----QIKGPVDVPGGEAPKEKQEA 477
Cdd:PTZ00121 1131 EEARK-----AEDARKAEEARKAEDAKRVEIArkaEDARkaEEARKAEDAKKAEAArkaeEVRKAEELRKAEDARKAEAA 1205
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  478 AQLDRPGQGIAVPMGE-AHRHEPPIPHDKVVVDEGQDQEGPEEKKPPP-RLPDEGDPAGRGQGAPPLPESEKEKQEPERG 555
Cdd:PTZ00121 1206 RKAEEERKAEEARKAEdAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEiRKFEEARMAHFARRQAAIKAEEARKADELKK 1285
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  556 GEGKRPGQVLAvgETEHPQKVPEANgqppvqprkedsrpgnrdpQPAAQARDSVELKALAaddgrEPAQKAGGALWKPVE 635
Cdd:PTZ00121 1286 AEEKKKADEAK--KAEEKKKADEAK-------------------KKAEEAKKADEAKKKA-----EEAKKKADAAKKKAE 1339
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  636 SAAESDAGGKAGLPVQRPEAAEQREKKEAEQQGGDQAGSKLEAEIKKLVAAGRAEMLdhavllqviqeqqvqQKRLLDQQ 715
Cdd:PTZ00121 1340 EAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEA---------------KKKAEEDK 1404
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|..
gi 568975963  716 EKllaviEEQHKEIRQQRQEGEEDKPKPADVQPepgVAVLRGQEEEAEHAGE 767
Cdd:PTZ00121 1405 KK-----ADELKKAAAAKKKADEAKKKAEEKKK---ADEAKKKAEEAKKADE 1448
PTZ00121 PTZ00121
MAEBL; Provisional
417-996 1.21e-06

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 53.22  E-value: 1.21e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  417 AEGAMKVEAARLSVQdpvvvvaEDSQEKLKPAEDKEVLEQAQIKGPVDVPGGEAPKEKQEAAQLDRPGQGIAVPMGEAHR 496
Cdd:PTZ00121 1196 AEDARKAEAARKAEE-------ERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARR 1268
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  497 HEPPIPHDKVVVDEGQDQE---------GPEEKKPPPRLPDEGDPAGRGQGAPPLPESEKEKQEP--ERGGEGKRPGQVL 565
Cdd:PTZ00121 1269 QAAIKAEEARKADELKKAEekkkadeakKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAakKKAEEAKKAAEAA 1348
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  566 AVGETEHPQKVPEANGQPPVQPRK--EDSRPGNRDPQPAAQARDSVELKALAADDgrepaQKAGGALWKPVESAAESDAG 643
Cdd:PTZ00121 1349 KAEAEAAADEAEAAEEKAEAAEKKkeEAKKKADAAKKKAEEKKKADEAKKKAEED-----KKKADELKKAAAAKKKADEA 1423
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  644 GKAGLPVQRpeaAEQREKKEAEQQGGDQAGSKLEAEIKKLVAAGRAEMLDHAVLLQVIQEQQVQQKRLLDQQEKLLAVIE 723
Cdd:PTZ00121 1424 KKKAEEKKK---ADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKAD 1500
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  724 EQHKEIRQQRQEGEEDKPKPADVQPEPGVAVLRGQEEEAEHAGETLGDDPSQPLQPVLGAPRGRPAPS-------QDMGQ 796
Cdd:PTZ00121 1501 EAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEakkaeedKNMAL 1580
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  797 HLPGEVKVLPGRDLADLPAGGSETEPQGAPIDLREDPKAAIKAAGAGKELVPGDLEAVHKAAPPEVPKSPEKQVAKAVAG 876
Cdd:PTZ00121 1581 RKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENK 1660
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  877 QRQDVFGEGSEERKETGKEAMAPGADTQKEAVQPLVGAEAKDTKSRQSGPTKAPVQTQAKFHPEPQAIFDTGQGSHPEVR 956
Cdd:PTZ00121 1661 IKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAE 1740
                         570       580       590       600
                  ....*....|....*....|....*....|....*....|
gi 568975963  957 SEAPRAVHIPPEEQHKGKGGAAIQEAKQRPDPNSGPKLAV 996
Cdd:PTZ00121 1741 EDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAV 1780
PHA03169 PHA03169
hypothetical protein; Provisional
510-672 4.41e-05

hypothetical protein; Provisional


Pssm-ID: 223003 [Multi-domain]  Cd Length: 413  Bit Score: 47.27  E-value: 4.41e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  510 EGQDQEGPEEKKPPPRLPDEGDPAGRGQGAPPLPESEKEKQEPERGGEGKRPGQvlavgetehpqkVPEANGQPPVQPRK 589
Cdd:PHA03169   98 ESVGSPTPSPSGSAEELASGLSPENTSGSSPESPASHSPPPSPPSHPGPHEPAP------------PESHNPSPNQQPSS 165
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  590 EDSRPGNRDPQPAAQArdsvelKALAADDGREPAQKAGGALWKPVESAAESDAGGKAGLPVQRPEAAEQREKKEAEQQGG 669
Cdd:PHA03169  166 FLQPSHEDSPEEPEPP------TSEPEPDSPGPPQSETPTSSPPPQSPPDEPGEPQSPTPQQAPSPNTQQAVEHEDEPTE 239

                  ...
gi 568975963  670 DQA 672
Cdd:PHA03169  240 PER 242
PspC_subgroup_2 NF033839
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...
433-601 9.68e-05

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.


Pssm-ID: 468202 [Multi-domain]  Cd Length: 557  Bit Score: 46.30  E-value: 9.68e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  433 PVVVVAEDSQEKLKPAEDK---EVLEQAQIKGPVDVPGGEAPKEKQEAaQLDRPGQGIAvPMGEAHRHE------PPIPH 503
Cdd:NF033839  309 EVKPEPETPKPEVKPQLEKpkpEVKPQPEKPKPEVKPQLETPKPEVKP-QPEKPKPEVK-PQPEKPKPEvkpqpeTPKPE 386
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  504 DKVVVDEGQDQEGPEEKKPPPRL---PDEGDPAGRGQGAPPLPE----SEKEKQEPERGGEGKRPgQVLAVGETEHPQKV 576
Cdd:NF033839  387 VKPQPEKPKPEVKPQPEKPKPEVkpqPEKPKPEVKPQPEKPKPEvkpqPEKPKPEVKPQPEKPKP-EVKPQPETPKPEVK 465
                         170       180
                  ....*....|....*....|....*.
gi 568975963  577 PEANG-QPPVQPRKEDSRPGNRDPQP 601
Cdd:NF033839  466 PQPEKpKPEVKPQPEKPKPDNSKPQA 491
PTZ00449 PTZ00449
104 kDa microneme/rhoptry antigen; Provisional
709-969 1.11e-04

104 kDa microneme/rhoptry antigen; Provisional


Pssm-ID: 185628 [Multi-domain]  Cd Length: 943  Bit Score: 46.61  E-value: 1.11e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  709 KRLLDQQEKLLAVIEEQHKEIRQQRQEGEEDKPKPADVqpePGvavlrGQEEEAEHAGETLGDDPSQ----PLQPVLGAP 784
Cdd:PTZ00449  486 KKLIKKSKKKLAPIEEEDSDKHDEPPEGPEASGLPPKA---PG-----DKEGEEGEHEDSKESDEPKeggkPGETKEGEV 557
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  785 RGRPAPSQdmgQHLPGEVKVLPGRdladlPAGGSETEPQGAPIDLR--EDPKAAIKAAGAGKELVPGDLEAVHKAAPPEV 862
Cdd:PTZ00449  558 GKKPGPAK---EHKPSKIPTLSKK-----PEFPKDPKHPKDPEEPKkpKRPRSAQRPTRPKSPKLPELLDIPKSPKRPES 629
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  863 PKSPEKQVAKavagQRqdvfgEGSEERKETGKEAMAPGA-DTQKEAVQPLVGAEAKDTKSRQSGPTKAPVQTQA------ 935
Cdd:PTZ00449  630 PKSPKRPPPP----QR-----PSSPERPEGPKIIKSPKPpKSPKPPFDPKFKEKFYDDYLDAAAKSKETKTTVVldesfe 700
                         250       260       270
                  ....*....|....*....|....*....|....*...
gi 568975963  936 ----KFHPEPQAIFDTGQGSHPEVRSEAPRAVHIPPEE 969
Cdd:PTZ00449  701 silkETLPETPGTPFTTPRPLPPKLPRDEEFPFEPIGD 738
PHA03169 PHA03169
hypothetical protein; Provisional
461-679 5.02e-04

hypothetical protein; Provisional


Pssm-ID: 223003 [Multi-domain]  Cd Length: 413  Bit Score: 43.81  E-value: 5.02e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  461 GPVDVPGGEAPKEKQEAAQLDRPGQGIAVPMGEAHRHEPPIPHDkvvvDEGQDQEGPEEKKPPPRlPDEGDPAGRGQGAP 540
Cdd:PHA03169  111 AEELASGLSPENTSGSSPESPASHSPPPSPPSHPGPHEPAPPES----HNPSPNQQPSSFLQPSH-EDSPEEPEPPTSEP 185
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  541 PlPESEK--EKQEPERGGEGKRPGQVLAVGETEHPQKVPEANGQPPVQPRKEDSRPGNRDPQPAAQardsvelkalaadd 618
Cdd:PHA03169  186 E-PDSPGppQSETPTSSPPPQSPPDEPGEPQSPTPQQAPSPNTQQAVEHEDEPTEPEREGPPFPGH-------------- 250
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568975963  619 gREPAQKAGGalWKPvesaaESDAGGKAGLPVQRPEAAEQREKKEAEQQGGDQAGSKLEAE 679
Cdd:PHA03169  251 -RSHSYTVVG--WKP-----STRPGGVPKLCLRCTSHPSHRSRLPEGQQSEDKVPRKYQAR 303
PRK10905 PRK10905
cell division protein DamX; Validated
535-646 9.18e-04

cell division protein DamX; Validated


Pssm-ID: 236792 [Multi-domain]  Cd Length: 328  Bit Score: 42.62  E-value: 9.18e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  535 RGQGAPPlpesEKEKQEPERGGEGKRPGQVLAVGETEHPQKVPEANGQPPVQP--RKEDSRPGNRDPQPAAQARDSVELK 612
Cdd:PRK10905  134 RNGNASR----QTAKTQTAERPATTRPARKQAVIEPKKPQATAKTEPKPVAQTpkRTEPAAPVASTKAPAATSTPAPKET 209
                          90       100       110
                  ....*....|....*....|....*....|....
gi 568975963  613 ALAAddgrePAQKAggalwKPVESAAESDAGGKA 646
Cdd:PRK10905  210 ATTA-----PVQTA-----SPAQTTATPAAGGKT 233
PHA03418 PHA03418
hypothetical E4 protein; Provisional
500-598 2.65e-03

hypothetical E4 protein; Provisional


Pssm-ID: 177646 [Multi-domain]  Cd Length: 230  Bit Score: 40.88  E-value: 2.65e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  500 PIPHDKVVVDEGQDQEGPEEKKPPPRLPDEGD---PAGRGQGAPPLPESEKEK---------QEPERGGEGKRPGQVLAV 567
Cdd:PHA03418   68 PNGHNKPPVTKQPGGEGTEEDHQAPLAADADDdprPGKRSKADEHGPAPGRAAlapfkldldQDPLHGDPDPPPGATGGQ 147
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 568975963  568 GET-----EHPQKVP-----EANGQPPVQPRKEDSRPGNRD 598
Cdd:PHA03418  148 GEEppeggEESQPPLgegegAVEGHPPPLPPAPEPKPHNGD 188
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
420-679 2.86e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 41.90  E-value: 2.86e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  420 AMKVEAARLSVQDPVVVVAEDS---QEKLKPAEDKEVLEQA---------QI-------KGPVDVPGGEAPKEKQEAAQL 480
Cdd:PRK07764  533 ILLPEATVLGVRGDTLVLGFSTgglARRFASPGNAEVLVTAlaeelggdwQVeavvgpaPGAAGGEGPPAPASSGPPEEA 612
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  481 DRPGQGIAVPMGEAHRHEPPIPHDKVVVDEGQDQEGPEEkkPPPRLPDEGDPAGRGQGAPPLPESEKEKQEPERGGEGKR 560
Cdd:PRK07764  613 ARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPE--HHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAP 690
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  561 PGQVLAVGetehPQKVPEANGQPPVQPRkedSRPGNRDPQPAAQARDSVELKALAADDGREPAQKAGGALWKPVESAAES 640
Cdd:PRK07764  691 AAPAGAAP----AQPAPAPAATPPAGQA---DDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPA 763
                         250       260       270
                  ....*....|....*....|....*....|....*....
gi 568975963  641 DAGGKAGLPVQRPEAAEQREKKEAEQQGGDQAGSKLEAE 679
Cdd:PRK07764  764 PAPAAAPAAAPPPSPPSEEEEMAEDDAPSMDDEDRRDAE 802
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
432-653 5.01e-03

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 40.92  E-value: 5.01e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  432 DPVVVVAEDSQEKLKPAEDKEVLEQAQIKGPVDVPGGEAPKEKQEAAQLDRPGQGIAvPMGEAHRHEPPIPHDkvvvdeg 511
Cdd:PHA03307   52 AVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTP-PGPSSPDPPPPTPPP------- 123
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963  512 qdqEGPEEKKPPPR---LPDEGDPAGRGQGAPPLPESEKEkqEPERGGEGKRPGQVLA--VGETEHPQKVPEANGQPPVQ 586
Cdd:PHA03307  124 ---ASPPPSPAPDLsemLRPVGSPGPPPAASPPAAGASPA--AVASDAASSRQAALPLssPEETARAPSSPPAEPPPSTP 198
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568975963  587 PRKEDSRPGNRDPQPAAQARDSvelkalAADDGREPAQKAGGALWKPVES-AAESDAGGKAGLPVQRP 653
Cdd:PHA03307  199 PAAASPRPPRRSSPISASASSP------APAPGRSAADDAGASSSDSSSSeSSGCGWGPENECPLPRP 260
2A1904 TIGR00927
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...
505-773 7.05e-03

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273344 [Multi-domain]  Cd Length: 1096  Bit Score: 40.75  E-value: 7.05e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963   505 KVVVDEGQD--QEGPEEKKPPPRLPDEGDPAGRGQGAPPLPESEKEKQEPERGGEGKRPGQVLAVGETEHPQKVPEANGQ 582
Cdd:TIGR00927  632 KGDVAEAEHtgERTGEEGERPTEAEGENGEESGGEAEQEGETETKGENESEGEIPAERKGEQEGEGEIEAKEADHKGETE 711
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963   583 PPVQPRKEDSRPGNRDPQPAAQardsvelkalAADDGREPAQKAGGalwkpvESAAESDAGGKAGLPVQRPEAAEQREKK 662
Cdd:TIGR00927  712 AEEVEHEGETEAEGTEDEGEIE----------TGEEGEEVEDEGEG------EAEGKHEVETEGDRKETEHEGETEAEGK 775
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975963   663 EAEQQGGDQAGS----KLEAEIKKLVAAGRAEMLDHAVLLQVIQEQQVQQKRLLDQQEKlLAVIEEQHKEIRQQRQ---- 734
Cdd:TIGR00927  776 EDEDEGEIQAGEdgemKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGE-QELNAENQGEAKQDEKgvdg 854
                          250       260       270
                   ....*....|....*....|....*....|....*....
gi 568975963   735 EGEEDKPKPADVQPEPGVAVLRGQEEEAEHAGETLGDDP 773
Cdd:TIGR00927  855 GGGSDGGDSEEEEEEEEEEEEEEEEEEEEEEEEEENEEP 893
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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