|
Name |
Accession |
Description |
Interval |
E-value |
| SLC5-6-like_sbd super family |
cl00456 |
Solute carrier families 5 and 6-like; solute binding domain; This superfamily includes the ... |
6-381 |
1.12e-52 |
|
Solute carrier families 5 and 6-like; solute binding domain; This superfamily includes the solute-binding domain of SLC5 proteins (also called the sodium/glucose cotransporters or solute sodium symporters), SLC6 proteins (also called the sodium- and chloride-dependent neurotransmitter transporters or Na+/Cl--dependent transporters), and nucleobase-cation-symport-1 (NCS1) transporters. SLC5s co-transport Na+ with sugars, amino acids, inorganic ions or vitamins. SLC6s include Na+/Cl--dependent plasma membrane transporters for the monoamine neurotransmitters serotonin, dopamine, and norepinephrine, and the amino acid neurotransmitters GABA and glycine. NCS1s are essential components of salvage pathways for nucleobases and related metabolites; their known substrates include allantoin, uracil, thiamine, and nicotinamide riboside. Members of this superfamily are important in human physiology and disease. They contain a functional core of 10 transmembrane helices (TMs): an inverted structural repeat, TMs1-5 and TMs6-10; TMs numbered to conform to the SLC6 Aquifex aeolicus LeuT.
The actual alignment was detected with superfamily member pfam01490:
Pssm-ID: 444915 Cd Length: 410 Bit Score: 190.59 E-value: 1.12e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 6 TSKWGLITNVVNSIVGVSVLTMPFCFKQCGIVLGALLLVFCSWMTHQSCMFLVKSA-----SLSKRRTYAGLAFHAYGKA 80
Cdd:pfam01490 3 ISAWQAVFNLINAIIGAGVLSLPYAFKQLGWIPGLILLLIVGLISLYTAHLLVRCSkevpvTGKRNKSYGDLGYRLLGPK 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 81 GKMLVETSMIGLMLGSCITFYVVIGDLGSNFFAPLLGlqvTRTVRVFLLFAVSLFIVLPLSLQRNMMA-SIQS-FSAMAL 158
Cdd:pfam01490 83 GRLLILFAILLNLFGVCISYLIFAGDNLPAIFDSFFD---TCPISLVYFIIIFGLIFIPLSFIPNLSAlSILSlLAAVSS 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 159 LFYTVFMFVIVLSSLKHGLFSGQWLRQVSYIRWEGVFRCVPIFGMSFACQSQVLPTYDSLDEPSV-KTMSSIFASSLNVV 237
Cdd:pfam01490 160 LYYIVILVLSVAEGIVLTAQGVGHLGSKTNIKLAGTFLAIGIIVFAFEGHAVLLPIQNEMKNPSKfKAMTKILLTAIIIA 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 238 TAFYVMVGFFGYVSFTDATTGNVLIHFP-SNPVTEMIRVGFVMSVAVGFPMMILPCRQALNTLLFEQQqkdgTFAAGGYM 316
Cdd:pfam01490 240 TVLYILIGLVGYLAFGDNVKGNILLNLPkSAWLIDIANLLLVLHVILSFPLQLFPIRQIVENLLFRKE----APFGASGK 315
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568975965 317 PP----LRFKVLTLSVVFGTMVGGVMIPNVETILGFTGATMGSLICFICPALIYKKAHKNAPSAQVVLW 381
Cdd:pfam01490 316 NNpkskLLRVVIRSGLVVITYLIAISVPFFGDLLSLVGATSCAPLSFILPPLFHLKLKKTKKKSQEKLW 384
|
|
| PTZ00121 super family |
cl31754 |
MAEBL; Provisional |
407-759 |
1.87e-06 |
|
MAEBL; Provisional
The actual alignment was detected with superfamily member PTZ00121:
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 52.45 E-value: 1.87e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 407 QEARSghrgdAEGAMKVEAARLSVQDPVVVVA---EDSQ--EKLKPAEDKEVLEQA----QIKGPVDVPGGEAPKEKQEA 477
Cdd:PTZ00121 1131 EEARK-----AEDARKAEEARKAEDAKRVEIArkaEDARkaEEARKAEDAKKAEAArkaeEVRKAEELRKAEDARKAEAA 1205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 478 AQLDRPGQGIAVPMGE-AHRHEPPIPHDKVVVDEGQDQEGPEEKKPPP-RLPDEGDPAGRGQGAPPLPESEKEKQEPERG 555
Cdd:PTZ00121 1206 RKAEEERKAEEARKAEdAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEiRKFEEARMAHFARRQAAIKAEEARKADELKK 1285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 556 GEGKRPGQVLAvgETEHPQKVPEANgqppvqprkedsrpgnrdpQPAAQARDSVELKALAaddgrEPAQKAGGALWKPVE 635
Cdd:PTZ00121 1286 AEEKKKADEAK--KAEEKKKADEAK-------------------KKAEEAKKADEAKKKA-----EEAKKKADAAKKKAE 1339
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 636 SAAESDAGGKAGLPVQRPEAAEQREKKEAEQQGGDQAGSKLEAG--RAEMLDHAvllqviqeqQVQQKRLLDQQEKllav 713
Cdd:PTZ00121 1340 EAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAkkKAEEKKKA---------DEAKKKAEEDKKK---- 1406
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 568975965 714 iEEQHKEIRQQRQEGEEDKPKPADVQPepgVAVLRGQEEEAEHAGE 759
Cdd:PTZ00121 1407 -ADELKKAAAAKKKADEAKKKAEEKKK---ADEAKKKAEEAKKADE 1448
|
|
| PTZ00449 super family |
cl33186 |
104 kDa microneme/rhoptry antigen; Provisional |
701-961 |
1.16e-04 |
|
104 kDa microneme/rhoptry antigen; Provisional
The actual alignment was detected with superfamily member PTZ00449:
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 46.22 E-value: 1.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 701 KRLLDQQEKLLAVIEEQHKEIRQQRQEGEEDKPKPADVqpePGvavlrGQEEEAEHAGETLGDDPSQ----PLQPVLGAP 776
Cdd:PTZ00449 486 KKLIKKSKKKLAPIEEEDSDKHDEPPEGPEASGLPPKA---PG-----DKEGEEGEHEDSKESDEPKeggkPGETKEGEV 557
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 777 RGRPAPSQdmgQHLPGEVKVLPGRdladlPAGGSETEPQGAPIDLR--EDPKAAIKAAGAGKELVPGDLEAVHKAAPPEV 854
Cdd:PTZ00449 558 GKKPGPAK---EHKPSKIPTLSKK-----PEFPKDPKHPKDPEEPKkpKRPRSAQRPTRPKSPKLPELLDIPKSPKRPES 629
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 855 PKSPEKQVAKavagQRqdvfgEGSEERKETGKEAMAPGA-DTQKEAVQPLVGAEAKDTKSRQSGPTKAPVQTQA------ 927
Cdd:PTZ00449 630 PKSPKRPPPP----QR-----PSSPERPEGPKIIKSPKPpKSPKPPFDPKFKEKFYDDYLDAAAKSKETKTTVVldesfe 700
|
250 260 270
....*....|....*....|....*....|....*...
gi 568975965 928 ----KFHPEPQAIFDTGQGSHPEVRSEAPRAVHIPPEE 961
Cdd:PTZ00449 701 silkETLPETPGTPFTTPRPLPPKLPRDEEFPFEPIGD 738
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Aa_trans |
pfam01490 |
Transmembrane amino acid transporter protein; This transmembrane region is found in many amino ... |
6-381 |
1.12e-52 |
|
Transmembrane amino acid transporter protein; This transmembrane region is found in many amino acid transporters including UNC-47 and MTR. UNC-47 encodes a vesicular amino butyric acid (GABA) transporter, (VGAT). UNC-47 is predicted to have 10 transmembrane domains. MTR is a N system amino acid transporter system protein involved in methyltryptophan resistance. Other members of this family include proline transporters and amino acid permeases.
Pssm-ID: 279788 Cd Length: 410 Bit Score: 190.59 E-value: 1.12e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 6 TSKWGLITNVVNSIVGVSVLTMPFCFKQCGIVLGALLLVFCSWMTHQSCMFLVKSA-----SLSKRRTYAGLAFHAYGKA 80
Cdd:pfam01490 3 ISAWQAVFNLINAIIGAGVLSLPYAFKQLGWIPGLILLLIVGLISLYTAHLLVRCSkevpvTGKRNKSYGDLGYRLLGPK 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 81 GKMLVETSMIGLMLGSCITFYVVIGDLGSNFFAPLLGlqvTRTVRVFLLFAVSLFIVLPLSLQRNMMA-SIQS-FSAMAL 158
Cdd:pfam01490 83 GRLLILFAILLNLFGVCISYLIFAGDNLPAIFDSFFD---TCPISLVYFIIIFGLIFIPLSFIPNLSAlSILSlLAAVSS 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 159 LFYTVFMFVIVLSSLKHGLFSGQWLRQVSYIRWEGVFRCVPIFGMSFACQSQVLPTYDSLDEPSV-KTMSSIFASSLNVV 237
Cdd:pfam01490 160 LYYIVILVLSVAEGIVLTAQGVGHLGSKTNIKLAGTFLAIGIIVFAFEGHAVLLPIQNEMKNPSKfKAMTKILLTAIIIA 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 238 TAFYVMVGFFGYVSFTDATTGNVLIHFP-SNPVTEMIRVGFVMSVAVGFPMMILPCRQALNTLLFEQQqkdgTFAAGGYM 316
Cdd:pfam01490 240 TVLYILIGLVGYLAFGDNVKGNILLNLPkSAWLIDIANLLLVLHVILSFPLQLFPIRQIVENLLFRKE----APFGASGK 315
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568975965 317 PP----LRFKVLTLSVVFGTMVGGVMIPNVETILGFTGATMGSLICFICPALIYKKAHKNAPSAQVVLW 381
Cdd:pfam01490 316 NNpkskLLRVVIRSGLVVITYLIAISVPFFGDLLSLVGATSCAPLSFILPPLFHLKLKKTKKKSQEKLW 384
|
|
| PTZ00206 |
PTZ00206 |
amino acid transporter; Provisional |
14-366 |
1.73e-25 |
|
amino acid transporter; Provisional
Pssm-ID: 240313 Cd Length: 467 Bit Score: 111.50 E-value: 1.73e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 14 NVVNSIVGVSVLTMPFCFKQCGIVLGALLLVFCSWMTHQSCMFLVKSASLSKRRTYAGLAFHAYGKAGKMLVETSMIGLM 93
Cdd:PTZ00206 68 NIASSTVGAGIVGLPSAANSSGLVMAMIYLIIITAMTIFSIYALGVAADKTNIRTYEGVARVLLGPWGSYYVAATRAFHG 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 94 LGSCITFYVVIGDLGSnffAPLLGLQV-----TRTVRVFLLFAVSLFIVLPLSLQRNMmASIQSFSAMALLFYTVFMFVI 168
Cdd:PTZ00206 148 FSACVAYVISVGDILS---ATLKGTNApdflkQKSGNRLLTSLMWLCFMLPLVIPRHI-DSLRYVSTIAVSFMVYLVIVI 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 169 VLSSLKHGLfsGQWLRQVSY--------IRWEGVFRCVP---IFGMSFACQSQVLPTYDSLDEPSVKTMSSIFASSLNVV 237
Cdd:PTZ00206 224 VVHSCMNGL--PENIKNVSVgkddnaeiILFNSGNRAIEglgVFIFAYVFQITAYEVYMDMTNRSVGKFVLASTIAMGMC 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 238 TAFYVMVGFFGYVSFTDATTGNVLIHFpsNPVTE-MIRVGFV---MSVAVGFPMMILPCRQALNTLLFEQQQKDGTFAAG 313
Cdd:PTZ00206 302 FTMYVLTAFFGYMDFGRNVTGSVLLMY--DPVNEpAIMVGFVgvlVKLFVSYALLGMACRNALYDVIGWDARKVAFWKHC 379
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 568975965 314 gympplrFKVLTLSVVFgtMVGGVMIPNVETILGFTGATMGSLICFICPALIY 366
Cdd:PTZ00206 380 -------IAVVTLSVVM--LLCGLFIPKINTVLGFAGSISGGLLGFILPALLF 423
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
407-759 |
1.87e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 52.45 E-value: 1.87e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 407 QEARSghrgdAEGAMKVEAARLSVQDPVVVVA---EDSQ--EKLKPAEDKEVLEQA----QIKGPVDVPGGEAPKEKQEA 477
Cdd:PTZ00121 1131 EEARK-----AEDARKAEEARKAEDAKRVEIArkaEDARkaEEARKAEDAKKAEAArkaeEVRKAEELRKAEDARKAEAA 1205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 478 AQLDRPGQGIAVPMGE-AHRHEPPIPHDKVVVDEGQDQEGPEEKKPPP-RLPDEGDPAGRGQGAPPLPESEKEKQEPERG 555
Cdd:PTZ00121 1206 RKAEEERKAEEARKAEdAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEiRKFEEARMAHFARRQAAIKAEEARKADELKK 1285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 556 GEGKRPGQVLAvgETEHPQKVPEANgqppvqprkedsrpgnrdpQPAAQARDSVELKALAaddgrEPAQKAGGALWKPVE 635
Cdd:PTZ00121 1286 AEEKKKADEAK--KAEEKKKADEAK-------------------KKAEEAKKADEAKKKA-----EEAKKKADAAKKKAE 1339
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 636 SAAESDAGGKAGLPVQRPEAAEQREKKEAEQQGGDQAGSKLEAG--RAEMLDHAvllqviqeqQVQQKRLLDQQEKllav 713
Cdd:PTZ00121 1340 EAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAkkKAEEKKKA---------DEAKKKAEEDKKK---- 1406
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 568975965 714 iEEQHKEIRQQRQEGEEDKPKPADVQPepgVAVLRGQEEEAEHAGE 759
Cdd:PTZ00121 1407 -ADELKKAAAAKKKADEAKKKAEEKKK---ADEAKKKAEEAKKADE 1448
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
433-601 |
9.12e-05 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 46.30 E-value: 9.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 433 PVVVVAEDSQEKLKPAEDK---EVLEQAQIKGPVDVPGGEAPKEKQEAaQLDRPGQGIAvPMGEAHRHE------PPIPH 503
Cdd:NF033839 309 EVKPEPETPKPEVKPQLEKpkpEVKPQPEKPKPEVKPQLETPKPEVKP-QPEKPKPEVK-PQPEKPKPEvkpqpeTPKPE 386
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 504 DKVVVDEGQDQEGPEEKKPPPRL---PDEGDPAGRGQGAPPLPE----SEKEKQEPERGGEGKRPgQVLAVGETEHPQKV 576
Cdd:NF033839 387 VKPQPEKPKPEVKPQPEKPKPEVkpqPEKPKPEVKPQPEKPKPEvkpqPEKPKPEVKPQPEKPKP-EVKPQPETPKPEVK 465
|
170 180
....*....|....*....|....*.
gi 568975965 577 PEANG-QPPVQPRKEDSRPGNRDPQP 601
Cdd:NF033839 466 PQPEKpKPEVKPQPEKPKPDNSKPQA 491
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
701-961 |
1.16e-04 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 46.22 E-value: 1.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 701 KRLLDQQEKLLAVIEEQHKEIRQQRQEGEEDKPKPADVqpePGvavlrGQEEEAEHAGETLGDDPSQ----PLQPVLGAP 776
Cdd:PTZ00449 486 KKLIKKSKKKLAPIEEEDSDKHDEPPEGPEASGLPPKA---PG-----DKEGEEGEHEDSKESDEPKeggkPGETKEGEV 557
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 777 RGRPAPSQdmgQHLPGEVKVLPGRdladlPAGGSETEPQGAPIDLR--EDPKAAIKAAGAGKELVPGDLEAVHKAAPPEV 854
Cdd:PTZ00449 558 GKKPGPAK---EHKPSKIPTLSKK-----PEFPKDPKHPKDPEEPKkpKRPRSAQRPTRPKSPKLPELLDIPKSPKRPES 629
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 855 PKSPEKQVAKavagQRqdvfgEGSEERKETGKEAMAPGA-DTQKEAVQPLVGAEAKDTKSRQSGPTKAPVQTQA------ 927
Cdd:PTZ00449 630 PKSPKRPPPP----QR-----PSSPERPEGPKIIKSPKPpKSPKPPFDPKFKEKFYDDYLDAAAKSKETKTTVVldesfe 700
|
250 260 270
....*....|....*....|....*....|....*...
gi 568975965 928 ----KFHPEPQAIFDTGQGSHPEVRSEAPRAVHIPPEE 961
Cdd:PTZ00449 701 silkETLPETPGTPFTTPRPLPPKLPRDEEFPFEPIGD 738
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
505-765 |
4.73e-04 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 44.22 E-value: 4.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 505 KVVVDEGQD--QEGPEEKKPPPRLPDEGDPAGRGQGAPPLPESEKEKQEPERGGEGKRPGQVLAVGETEHPQKVPEANGQ 582
Cdd:TIGR00927 632 KGDVAEAEHtgERTGEEGERPTEAEGENGEESGGEAEQEGETETKGENESEGEIPAERKGEQEGEGEIEAKEADHKGETE 711
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 583 PPVQPRKEDSRPGNRDPQPAAQARDSVELKalaADDGREPAQkAGGALWKPVESAAESDAGGKAGLPVQRPEAAEQREKK 662
Cdd:TIGR00927 712 AEEVEHEGETEAEGTEDEGEIETGEEGEEV---EDEGEGEAE-GKHEVETEGDRKETEHEGETEAEGKEDEDEGEIQAGE 787
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 663 EAEQQGGDQAGSKLEAGRAEMLDHAVLLQVIQEQQVQQKRLLDQQEKlLAVIEEQHKEIRQQRQ----EGEEDKPKPADV 738
Cdd:TIGR00927 788 DGEMKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGE-QELNAENQGEAKQDEKgvdgGGGSDGGDSEEE 866
|
250 260
....*....|....*....|....*..
gi 568975965 739 QPEPGVAVLRGQEEEAEHAGETLGDDP 765
Cdd:TIGR00927 867 EEEEEEEEEEEEEEEEEEEEEEENEEP 893
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Aa_trans |
pfam01490 |
Transmembrane amino acid transporter protein; This transmembrane region is found in many amino ... |
6-381 |
1.12e-52 |
|
Transmembrane amino acid transporter protein; This transmembrane region is found in many amino acid transporters including UNC-47 and MTR. UNC-47 encodes a vesicular amino butyric acid (GABA) transporter, (VGAT). UNC-47 is predicted to have 10 transmembrane domains. MTR is a N system amino acid transporter system protein involved in methyltryptophan resistance. Other members of this family include proline transporters and amino acid permeases.
Pssm-ID: 279788 Cd Length: 410 Bit Score: 190.59 E-value: 1.12e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 6 TSKWGLITNVVNSIVGVSVLTMPFCFKQCGIVLGALLLVFCSWMTHQSCMFLVKSA-----SLSKRRTYAGLAFHAYGKA 80
Cdd:pfam01490 3 ISAWQAVFNLINAIIGAGVLSLPYAFKQLGWIPGLILLLIVGLISLYTAHLLVRCSkevpvTGKRNKSYGDLGYRLLGPK 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 81 GKMLVETSMIGLMLGSCITFYVVIGDLGSNFFAPLLGlqvTRTVRVFLLFAVSLFIVLPLSLQRNMMA-SIQS-FSAMAL 158
Cdd:pfam01490 83 GRLLILFAILLNLFGVCISYLIFAGDNLPAIFDSFFD---TCPISLVYFIIIFGLIFIPLSFIPNLSAlSILSlLAAVSS 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 159 LFYTVFMFVIVLSSLKHGLFSGQWLRQVSYIRWEGVFRCVPIFGMSFACQSQVLPTYDSLDEPSV-KTMSSIFASSLNVV 237
Cdd:pfam01490 160 LYYIVILVLSVAEGIVLTAQGVGHLGSKTNIKLAGTFLAIGIIVFAFEGHAVLLPIQNEMKNPSKfKAMTKILLTAIIIA 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 238 TAFYVMVGFFGYVSFTDATTGNVLIHFP-SNPVTEMIRVGFVMSVAVGFPMMILPCRQALNTLLFEQQqkdgTFAAGGYM 316
Cdd:pfam01490 240 TVLYILIGLVGYLAFGDNVKGNILLNLPkSAWLIDIANLLLVLHVILSFPLQLFPIRQIVENLLFRKE----APFGASGK 315
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568975965 317 PP----LRFKVLTLSVVFGTMVGGVMIPNVETILGFTGATMGSLICFICPALIYKKAHKNAPSAQVVLW 381
Cdd:pfam01490 316 NNpkskLLRVVIRSGLVVITYLIAISVPFFGDLLSLVGATSCAPLSFILPPLFHLKLKKTKKKSQEKLW 384
|
|
| PTZ00206 |
PTZ00206 |
amino acid transporter; Provisional |
14-366 |
1.73e-25 |
|
amino acid transporter; Provisional
Pssm-ID: 240313 Cd Length: 467 Bit Score: 111.50 E-value: 1.73e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 14 NVVNSIVGVSVLTMPFCFKQCGIVLGALLLVFCSWMTHQSCMFLVKSASLSKRRTYAGLAFHAYGKAGKMLVETSMIGLM 93
Cdd:PTZ00206 68 NIASSTVGAGIVGLPSAANSSGLVMAMIYLIIITAMTIFSIYALGVAADKTNIRTYEGVARVLLGPWGSYYVAATRAFHG 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 94 LGSCITFYVVIGDLGSnffAPLLGLQV-----TRTVRVFLLFAVSLFIVLPLSLQRNMmASIQSFSAMALLFYTVFMFVI 168
Cdd:PTZ00206 148 FSACVAYVISVGDILS---ATLKGTNApdflkQKSGNRLLTSLMWLCFMLPLVIPRHI-DSLRYVSTIAVSFMVYLVIVI 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 169 VLSSLKHGLfsGQWLRQVSY--------IRWEGVFRCVP---IFGMSFACQSQVLPTYDSLDEPSVKTMSSIFASSLNVV 237
Cdd:PTZ00206 224 VVHSCMNGL--PENIKNVSVgkddnaeiILFNSGNRAIEglgVFIFAYVFQITAYEVYMDMTNRSVGKFVLASTIAMGMC 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 238 TAFYVMVGFFGYVSFTDATTGNVLIHFpsNPVTE-MIRVGFV---MSVAVGFPMMILPCRQALNTLLFEQQQKDGTFAAG 313
Cdd:PTZ00206 302 FTMYVLTAFFGYMDFGRNVTGSVLLMY--DPVNEpAIMVGFVgvlVKLFVSYALLGMACRNALYDVIGWDARKVAFWKHC 379
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 568975965 314 gympplrFKVLTLSVVFgtMVGGVMIPNVETILGFTGATMGSLICFICPALIY 366
Cdd:PTZ00206 380 -------IAVVTLSVVM--LLCGLFIPKINTVLGFAGSISGGLLGFILPALLF 423
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
407-759 |
1.87e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 52.45 E-value: 1.87e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 407 QEARSghrgdAEGAMKVEAARLSVQDPVVVVA---EDSQ--EKLKPAEDKEVLEQA----QIKGPVDVPGGEAPKEKQEA 477
Cdd:PTZ00121 1131 EEARK-----AEDARKAEEARKAEDAKRVEIArkaEDARkaEEARKAEDAKKAEAArkaeEVRKAEELRKAEDARKAEAA 1205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 478 AQLDRPGQGIAVPMGE-AHRHEPPIPHDKVVVDEGQDQEGPEEKKPPP-RLPDEGDPAGRGQGAPPLPESEKEKQEPERG 555
Cdd:PTZ00121 1206 RKAEEERKAEEARKAEdAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEiRKFEEARMAHFARRQAAIKAEEARKADELKK 1285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 556 GEGKRPGQVLAvgETEHPQKVPEANgqppvqprkedsrpgnrdpQPAAQARDSVELKALAaddgrEPAQKAGGALWKPVE 635
Cdd:PTZ00121 1286 AEEKKKADEAK--KAEEKKKADEAK-------------------KKAEEAKKADEAKKKA-----EEAKKKADAAKKKAE 1339
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 636 SAAESDAGGKAGLPVQRPEAAEQREKKEAEQQGGDQAGSKLEAG--RAEMLDHAvllqviqeqQVQQKRLLDQQEKllav 713
Cdd:PTZ00121 1340 EAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAkkKAEEKKKA---------DEAKKKAEEDKKK---- 1406
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 568975965 714 iEEQHKEIRQQRQEGEEDKPKPADVQPepgVAVLRGQEEEAEHAGE 759
Cdd:PTZ00121 1407 -ADELKKAAAAKKKADEAKKKAEEKKK---ADEAKKKAEEAKKADE 1448
|
|
| PHA03169 |
PHA03169 |
hypothetical protein; Provisional |
510-672 |
4.98e-05 |
|
hypothetical protein; Provisional
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 46.89 E-value: 4.98e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 510 EGQDQEGPEEKKPPPRLPDEGDPAGRGQGAPPLPESEKEKQEPERGGEGKRPGQvlavgetehpqkVPEANGQPPVQPRK 589
Cdd:PHA03169 98 ESVGSPTPSPSGSAEELASGLSPENTSGSSPESPASHSPPPSPPSHPGPHEPAP------------PESHNPSPNQQPSS 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 590 EDSRPGNRDPQPAAQArdsvelKALAADDGREPAQKAGGALWKPVESAAESDAGGKAGLPVQRPEAAEQREKKEAEQQGG 669
Cdd:PHA03169 166 FLQPSHEDSPEEPEPP------TSEPEPDSPGPPQSETPTSSPPPQSPPDEPGEPQSPTPQQAPSPNTQQAVEHEDEPTE 239
|
...
gi 568975965 670 DQA 672
Cdd:PHA03169 240 PER 242
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
433-601 |
9.12e-05 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 46.30 E-value: 9.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 433 PVVVVAEDSQEKLKPAEDK---EVLEQAQIKGPVDVPGGEAPKEKQEAaQLDRPGQGIAvPMGEAHRHE------PPIPH 503
Cdd:NF033839 309 EVKPEPETPKPEVKPQLEKpkpEVKPQPEKPKPEVKPQLETPKPEVKP-QPEKPKPEVK-PQPEKPKPEvkpqpeTPKPE 386
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 504 DKVVVDEGQDQEGPEEKKPPPRL---PDEGDPAGRGQGAPPLPE----SEKEKQEPERGGEGKRPgQVLAVGETEHPQKV 576
Cdd:NF033839 387 VKPQPEKPKPEVKPQPEKPKPEVkpqPEKPKPEVKPQPEKPKPEvkpqPEKPKPEVKPQPEKPKP-EVKPQPETPKPEVK 465
|
170 180
....*....|....*....|....*.
gi 568975965 577 PEANG-QPPVQPRKEDSRPGNRDPQP 601
Cdd:NF033839 466 PQPEKpKPEVKPQPEKPKPDNSKPQA 491
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
701-961 |
1.16e-04 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 46.22 E-value: 1.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 701 KRLLDQQEKLLAVIEEQHKEIRQQRQEGEEDKPKPADVqpePGvavlrGQEEEAEHAGETLGDDPSQ----PLQPVLGAP 776
Cdd:PTZ00449 486 KKLIKKSKKKLAPIEEEDSDKHDEPPEGPEASGLPPKA---PG-----DKEGEEGEHEDSKESDEPKeggkPGETKEGEV 557
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 777 RGRPAPSQdmgQHLPGEVKVLPGRdladlPAGGSETEPQGAPIDLR--EDPKAAIKAAGAGKELVPGDLEAVHKAAPPEV 854
Cdd:PTZ00449 558 GKKPGPAK---EHKPSKIPTLSKK-----PEFPKDPKHPKDPEEPKkpKRPRSAQRPTRPKSPKLPELLDIPKSPKRPES 629
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 855 PKSPEKQVAKavagQRqdvfgEGSEERKETGKEAMAPGA-DTQKEAVQPLVGAEAKDTKSRQSGPTKAPVQTQA------ 927
Cdd:PTZ00449 630 PKSPKRPPPP----QR-----PSSPERPEGPKIIKSPKPpKSPKPPFDPKFKEKFYDDYLDAAAKSKETKTTVVldesfe 700
|
250 260 270
....*....|....*....|....*....|....*...
gi 568975965 928 ----KFHPEPQAIFDTGQGSHPEVRSEAPRAVHIPPEE 961
Cdd:PTZ00449 701 silkETLPETPGTPFTTPRPLPPKLPRDEEFPFEPIGD 738
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
417-988 |
1.76e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 45.90 E-value: 1.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 417 AEGAMKVEAARLSVQdpvvvvaEDSQEKLKPAEDKEVLEQAQIKGPVDVPGGEAPKEKQEAAQLDRPGQGIAVPMGEAHR 496
Cdd:PTZ00121 1196 AEDARKAEAARKAEE-------ERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARR 1268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 497 HEPPIPHDKVVVDEGQDQE---------GPEEKKPPPRLPDEGDPAGRGQGAPPLPESEKEKQEP--ERGGEGKRPGQVL 565
Cdd:PTZ00121 1269 QAAIKAEEARKADELKKAEekkkadeakKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAakKKAEEAKKAAEAA 1348
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 566 AVGETEHPQKVPEANGQPPVQPRK--EDSRPGNRDPQPAAQARDSVELKALAADDGR--EPAQKAGGALWKPVESAAESD 641
Cdd:PTZ00121 1349 KAEAEAAADEAEAAEEKAEAAEKKkeEAKKKADAAKKKAEEKKKADEAKKKAEEDKKkaDELKKAAAAKKKADEAKKKAE 1428
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 642 AGGKAglPVQRPEAAEQREKKEAEQQGGDQAGSKLEAGRAEMLDHAVLLQVIQEQQVQQKRLLDQQEKLLAVIEEQHKEI 721
Cdd:PTZ00121 1429 EKKKA--DEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAA 1506
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 722 RQQRQEGEEDKPKPADVQPEPGVAVLRGQEEEAEHAGETLGDDPSQPLQPVLGAPRGRPAPS-------QDMGQHLPGEV 794
Cdd:PTZ00121 1507 EAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEakkaeedKNMALRKAEEA 1586
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 795 KVLPGRDLADLPAGGSETEPQGAPIDLREDPKAAIKAAGAGKELVPGDLEAVHKAAPPEVPKSPEKQVAKAVAGQRQDVF 874
Cdd:PTZ00121 1587 KKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEE 1666
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 875 GEGSEERKETGKEAMAPGADTQKEAVQPLVGAEAKDTKSRQSGPTKAPVQTQAKFHPEPQAIFDTGQGSHPEVRSEAPRA 954
Cdd:PTZ00121 1667 AKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKA 1746
|
570 580 590
....*....|....*....|....*....|....
gi 568975965 955 VHIPPEEQHKGKGGAAIQEAKQRPDPNSGPKLAV 988
Cdd:PTZ00121 1747 EEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAV 1780
|
|
| PHA03169 |
PHA03169 |
hypothetical protein; Provisional |
461-680 |
4.56e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 43.81 E-value: 4.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 461 GPVDVPGGEAPKEKQEAAQLDRPGQGIAVPMGEAHRHEPPIPHDkvvvDEGQDQEGPEEKKPPPRlPDEGDPAGRGQGAP 540
Cdd:PHA03169 111 AEELASGLSPENTSGSSPESPASHSPPPSPPSHPGPHEPAPPES----HNPSPNQQPSSFLQPSH-EDSPEEPEPPTSEP 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 541 PlPESEK--EKQEPERGGEGKRPGQVLAVGETEHPQKVPEANGQPPVQPRKEDSRPGNRDPQPAAQardsvelkalaadd 618
Cdd:PHA03169 186 E-PDSPGppQSETPTSSPPPQSPPDEPGEPQSPTPQQAPSPNTQQAVEHEDEPTEPEREGPPFPGH-------------- 250
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568975965 619 gREPAQKAGGalWKPvesaaESDAGGKAGLPVQRPEAAEQREKKEAEQQGGDQAGSKLEAGR 680
Cdd:PHA03169 251 -RSHSYTVVG--WKP-----STRPGGVPKLCLRCTSHPSHRSRLPEGQQSEDKVPRKYQARR 304
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
505-765 |
4.73e-04 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 44.22 E-value: 4.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 505 KVVVDEGQD--QEGPEEKKPPPRLPDEGDPAGRGQGAPPLPESEKEKQEPERGGEGKRPGQVLAVGETEHPQKVPEANGQ 582
Cdd:TIGR00927 632 KGDVAEAEHtgERTGEEGERPTEAEGENGEESGGEAEQEGETETKGENESEGEIPAERKGEQEGEGEIEAKEADHKGETE 711
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 583 PPVQPRKEDSRPGNRDPQPAAQARDSVELKalaADDGREPAQkAGGALWKPVESAAESDAGGKAGLPVQRPEAAEQREKK 662
Cdd:TIGR00927 712 AEEVEHEGETEAEGTEDEGEIETGEEGEEV---EDEGEGEAE-GKHEVETEGDRKETEHEGETEAEGKEDEDEGEIQAGE 787
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 663 EAEQQGGDQAGSKLEAGRAEMLDHAVLLQVIQEQQVQQKRLLDQQEKlLAVIEEQHKEIRQQRQ----EGEEDKPKPADV 738
Cdd:TIGR00927 788 DGEMKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGE-QELNAENQGEAKQDEKgvdgGGGSDGGDSEEE 866
|
250 260
....*....|....*....|....*..
gi 568975965 739 QPEPGVAVLRGQEEEAEHAGETLGDDP 765
Cdd:TIGR00927 867 EEEEEEEEEEEEEEEEEEEEEEENEEP 893
|
|
| PRK10905 |
PRK10905 |
cell division protein DamX; Validated |
535-646 |
9.18e-04 |
|
cell division protein DamX; Validated
Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 42.62 E-value: 9.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 535 RGQGAPPlpesEKEKQEPERGGEGKRPGQVLAVGETEHPQKVPEANGQPPVQP--RKEDSRPGNRDPQPAAQARDSVELK 612
Cdd:PRK10905 134 RNGNASR----QTAKTQTAERPATTRPARKQAVIEPKKPQATAKTEPKPVAQTpkRTEPAAPVASTKAPAATSTPAPKET 209
|
90 100 110
....*....|....*....|....*....|....
gi 568975965 613 ALAAddgrePAQKAggalwKPVESAAESDAGGKA 646
Cdd:PRK10905 210 ATTA-----PVQTA-----SPAQTTATPAAGGKT 233
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
420-683 |
1.92e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 42.28 E-value: 1.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 420 AMKVEAARLSVQDPVVVVAEDS---QEKLKPAEDKEVLEQA---------QI-------KGPVDVPGGEAPKEKQEAAQL 480
Cdd:PRK07764 533 ILLPEATVLGVRGDTLVLGFSTgglARRFASPGNAEVLVTAlaeelggdwQVeavvgpaPGAAGGEGPPAPASSGPPEEA 612
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 481 DRPGQGIAVPMGEAHRHEPPIPHDKVVVDEGQDQEGPEEkkPPPRLPDEGDPAGRGQGAPPLPESEKEKQEPERGGEGKR 560
Cdd:PRK07764 613 ARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPE--HHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAP 690
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 561 PGQVLAVGetehPQKVPEANGQPPVQPRkedSRPGNRDPQPAAQARDSVELKALAADDGREPAQKAGGALWKPVESAAES 640
Cdd:PRK07764 691 AAPAGAAP----AQPAPAPAATPPAGQA---DDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPA 763
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 568975965 641 DAGGKAGLPVQRPEAAEQREKKEAEQQGGDQAGSKLEAGRAEM 683
Cdd:PRK07764 764 PAPAAAPAAAPPPSPPSEEEEMAEDDAPSMDDEDRRDAEEVAM 806
|
|
| PHA03418 |
PHA03418 |
hypothetical E4 protein; Provisional |
500-598 |
3.23e-03 |
|
hypothetical E4 protein; Provisional
Pssm-ID: 177646 [Multi-domain] Cd Length: 230 Bit Score: 40.49 E-value: 3.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 500 PIPHDKVVVDEGQDQEGPEEKKPPPRLPDEGD---PAGRGQGAPPLPESEKEK---------QEPERGGEGKRPGQVLAV 567
Cdd:PHA03418 68 PNGHNKPPVTKQPGGEGTEEDHQAPLAADADDdprPGKRSKADEHGPAPGRAAlapfkldldQDPLHGDPDPPPGATGGQ 147
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 568975965 568 GET-----EHPQKVP-----EANGQPPVQPRKEDSRPGNRD 598
Cdd:PHA03418 148 GEEppeggEESQPPLgegegAVEGHPPPLPPAPEPKPHNGD 188
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
432-653 |
4.97e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 40.92 E-value: 4.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 432 DPVVVVAEDSQEKLKPAEDKEVLEQAQIKGPVDVPGGEAPKEKQEAAQLDRPGQGIAvPMGEAHRHEPPIPHDkvvvdeg 511
Cdd:PHA03307 52 AVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTP-PGPSSPDPPPPTPPP------- 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 512 qdqEGPEEKKPPPR---LPDEGDPAGRGQGAPPLPESEKEkqEPERGGEGKRPGQVLA--VGETEHPQKVPEANGQPPVQ 586
Cdd:PHA03307 124 ---ASPPPSPAPDLsemLRPVGSPGPPPAASPPAAGASPA--AVASDAASSRQAALPLssPEETARAPSSPPAEPPPSTP 198
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568975965 587 PRKEDSRPGNRDPQPAAQARDSvelkalAADDGREPAQKAGGALWKPVES-AAESDAGGKAGLPVQRP 653
Cdd:PHA03307 199 PAAASPRPPRRSSPISASASSP------APAPGRSAADDAGASSSDSSSSeSSGCGWGPENECPLPRP 260
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
417-755 |
6.97e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 40.51 E-value: 6.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 417 AEGAMKVEAARLSVQDpvvvvAEDSQEKLKPAEDKEVLEQAQIKGPVDVPGGEAPKEKQEA---AQLDRPGQGIAVPMGE 493
Cdd:PTZ00121 1440 AEEAKKADEAKKKAEE-----AKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAkkkADEAKKAAEAKKKADE 1514
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 494 AHRHEPPIPHDKVVVDEGQDQEGPEEKKPPPRLPDEGDPAGRGQGAPPLPESEKEKQEPERGG------------EGKRP 561
Cdd:PTZ00121 1515 AKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNmalrkaeeakkaEEARI 1594
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 562 GQVLAVGETEHPQKVPEANGQPPVQPRKEDSRPGNRDPQPAAQARDSVELKALAADDGR----EPAQKAGGALWKPVESA 637
Cdd:PTZ00121 1595 EEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKkaeeENKIKAAEEAKKAEEDK 1674
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568975965 638 AESDAGGKAGLPVQRPEAAEQREKKEAEQQGGDQAGSKLEAGRAEMLDHAVLLQVIQEQQVQQKRLLDQQEKLLAVIEEQ 717
Cdd:PTZ00121 1675 KKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEE 1754
|
330 340 350
....*....|....*....|....*....|....*...
gi 568975965 718 HKEIRQQRQEGEEDKPKpaDVQPEPGVAVLRGQEEEAE 755
Cdd:PTZ00121 1755 EKKKIAHLKKEEEKKAE--EIRKEKEAVIEEELDEEDE 1790
|
|
| |
