|
Name |
Accession |
Description |
Interval |
E-value |
| CATSPERG super family |
cl20936 |
Cation channel sperm-associated protein subunit gamma; This family represents the gamma ... |
733-1663 |
0e+00 |
|
Cation channel sperm-associated protein subunit gamma; This family represents the gamma subunit of the CATSPER, or cation channel sperm-associated protein complex. The complex appears only to be expressed in the flagellum of sperm. The complex is activated at alkaline intracellular pH, and being restricted to the flagellum is the mediating calcium channel.
The actual alignment was detected with superfamily member pfam15064:
Pssm-ID: 464479 Cd Length: 971 Bit Score: 1804.47 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 733 MSPVSPVWPRKPNLWAFWVLRLVLLLSLKSWAEDTLQHCTWLLVLNKFEKVGLHLSKDRFQDHEPIDTVAKVFQKLTDSP 812
Cdd:pfam15064 1 MSPVGPAWPRKPVLRALWALRVVLLLPWRLWAEDELQHCTWLVVLNKFEKVGLNLSSDRFFDQEPIDTVDKVFQKLVDSP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 813 IDPSENYLSFPYYLQINFSCPGQNSEELARKGHLMGMKPMVRINYMYSVNFYRWEMENLQILMEAAPMRSTGYCPAEAMC 892
Cdd:pfam15064 81 IDPSENYLGFPYYLKINYSCPGQNSEELVRKGHLTGLKPMVLVTFQSPVNFYRWKIEQLQIQMEAAPFRSTEYCPAEELC 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 893 ILNWYTPMPFKNGSVVSSVDIYTNGIGPFIPKKRFYVNMNGFLKRDASGKSLFAIGYESLVLKSSHFRLSKSRPLWYTVN 972
Cdd:pfam15064 161 VMNWYTPMPIKNGSVVMSVDIYSNGLGPFIPKKRFQVNINGFLKRDRSNKSLFAVGYESLDLKPRHFVNVPSRPLWYTVD 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 973 HAPVFILGGFYDEKAILFSDSNFQDYVLLELSIDSCWVGSFYCPILGFSATIHDAIATESTLFIRQNQLVYYFTGTYSTL 1052
Cdd:pfam15064 241 HAPVLILGGIPDEKAILFTDTNFQDFVLVELSIDSCWVGSFYCPILGFSATIYDAIATESTLFIRQNQLVYYFTGTYPTL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 1053 FDKSHGSSRWVRVLPSECIKRLCPVYFSGNGSEYVLALTTGKNEGYIHIGTITDGLVSFEMVPDGWSVCEKLPGKNCSID 1132
Cdd:pfam15064 321 HEKNHGSGRWVRVLASECIKKLCPVYFHSNGSEYVLALTTGKNEGYIHFGTITDGLVSFEMLPRGWSVCEKIPVKNCSIT 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 1133 WATYITDERNLLLLVKID---SGQFYL-VNFNTEFKTLNILYKIPEFIPEAKELDFLVLLDTVTYTNTPMTPKGLFFNTL 1208
Cdd:pfam15064 401 WATYIADDYNLLLLVEIDhntSGQYFLvVNYNTEFDTLNILYKIPEFIPDARGLEFLMILGTESYTNTPMTPKGMFFNTY 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 1209 NNMLYIWGNFILQSYNREEFIFLADFPKESTIKYMVNSFKGQMAVVTENEEIWYFLEGGYDVYQVVPSQGWRTYLKLQKM 1288
Cdd:pfam15064 481 NNLLFIWGNFLLQSYNKENYIYLADFPKELSIKYLVNSFHGDMAIVTETEEIWYLLEGSYDVYKLFPSKGWETYLSLQKM 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 1289 QKSPLYSTNESLVSLFYQDENLFQLVYLFDVGKERLVKRLLPVGTLMEYNLPKPFTVVNQGNYKMITFTNTCPFKAIHAV 1368
Cdd:pfam15064 561 QQSSFYSHNETMVTLFYEDNKLYQLVYLIDVQKGRLVKRLLPVETLLMYQLPKPYTVENQGSHLTLSFTNTCPFTAMHLQ 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 1369 DVPKKQHASRTESYVALPPLVSESLGFHNNNTLAVYQGLVYYLLWLHSKYDKPYADPVHDPTWRWWQHKTKDKDYFFYLF 1448
Cdd:pfam15064 641 DLPKPQHYTRQERYRALPPLVLESLGFHNNNSLAVYQGLVYYLLWLHSKYDKPYADPVHDPTWRWWKNKKQDQDYYFYLA 720
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 1449 SNRLAAEGIYINMNAYQKLYNMS------------------------------------GPTINVDKKLSLSLVLADPEC 1492
Cdd:pfam15064 721 SNWLSAGGVHIDMNSYEKIYNLSgeyglperifldkgtwytfsvfltargdtftssdsqGATIQVDSKVDLAVVLADPEC 800
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 1493 LSVTATREFLLNRNTLLTKIKVIDKKRCSEQGMVGRNIKKTSMLIKVLGAPGNCIQRTYLGDHIQGIRLVPIFIGCPPGK 1572
Cdd:pfam15064 801 LEAVVKQEVLLNRNSVLFKITLIDKKRCSEQGISGHHLMKTSMMIKVLGSSGHCFQNTYLGASMQGNLMVPIFIGCPPGK 880
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 1573 RLAFDVSYTIKHSEEINKHYFDCVIKDAEMPCFLFRDLFQPFFLVQDLVTGDSGSFLGSYVLKVVGGGRTLNTIRDYTEE 1652
Cdd:pfam15064 881 RLAFDITYTLKYNRLQNKHYFDCVIKDAEMPCFLFRDLFYPFFLIQDLVTGDSGSFQGSYVLKVVGGGPTLNTIRDYTEE 960
|
970
....*....|.
gi 568945964 1653 EIFRYNSPLDT 1663
Cdd:pfam15064 961 EIYRFNSPLDT 971
|
|
| Fibrinogen_BP super family |
cl26313 |
Fibrinogen binding protein; Proteins in this family bind to fibrinogen. Members of this family ... |
304-666 |
7.01e-11 |
|
Fibrinogen binding protein; Proteins in this family bind to fibrinogen. Members of this family includes the fibrinogen receptor, FbsA, which mediates platelet aggregation.
The actual alignment was detected with superfamily member pfam08017:
Pssm-ID: 311808 [Multi-domain] Cd Length: 393 Bit Score: 66.43 E-value: 7.01e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 304 NQDQGRGQERRRSEdlnycntwGLNQDQGRGQERRLsedlsycniRDL-NQDQGRGQEWRRSEDPNHRDTRGLSQDQGRG 382
Cdd:pfam08017 24 NQSQGNVLERRQRD--------AENRSQGNVLERRQ---------RDAeNRSQGNVLERRQRDAENRSQGNVLERRQRDA 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 383 QKRRQSEDLNYCNTRGLNQDLGRGQERRLSEdlnycntrGLNEDLGRGQERRLSEdlnycntrGLNQDQGRGQERRQSKd 462
Cdd:pfam08017 87 ENRSQGNVLERRQRDAENRSQGNVLERRQRD--------AENKSQGNVLERRQRD--------AENRSQGNVLERRQRD- 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 463 wnycntwGLNQYQGRGQERRlSEDLNycntrclNQDQGRSQERRlSKDSNycntwglNQDQGHGQEKKQTEDLNYCNTRD 542
Cdd:pfam08017 150 -------AENRSQGNVLERR-QRDAE-------NRSQGNVLERR-QRDAE-------NKSQGNVLERRQRDAENRSQGNV 206
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 543 LSQGQGRGQERRRSEDPNHRDTRGLSQDQGRGQERRQSEDLNYCNTQGLNQDRGRGQERRQSEHLNYCNTWSLNQDQGRG 622
Cdd:pfam08017 207 LERRQRDAENRSQGNVLERRQRDAENRSQGNVLERRQRDAENKSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNV 286
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 568945964 623 QERRQsedplyRDTPDRSQ-DQGRGQKRKQSQDLISRTTQTLSQG 666
Cdd:pfam08017 287 LERRQ------RDAENKSQvGQLIGKNPLLSKSIISRENNHSSQG 325
|
|
| PRK12678 super family |
cl36163 |
transcription termination factor Rho; Provisional |
81-318 |
1.74e-09 |
|
transcription termination factor Rho; Provisional
The actual alignment was detected with superfamily member PRK12678:
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 62.61 E-value: 1.74e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 81 RERTDWSEERLLCEETTGGEERPQGVERPHDQERFPRGKAGLAGRAGAEEKPPGREKGFKEKGCDEQEGQVALDPGRRSG 160
Cdd:PRK12678 84 AAAARQAEQPAAEAAAAKAEAAPAARAAAAAAAEAASAPEAAQARERRERGEAARRGAARKAGEGGEQPATEARADAAER 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 161 QDQGRGQEWRRSEDPnycntwGLNQDQGRGQERRLSEGlnyRNTPALNQDQGRGQERRlsedlnycntrDLNQDQGRGQE 240
Cdd:PRK12678 164 TEEEERDERRRRGDR------EDRQAEAERGERGRREE---RGRDGDDRDRRDRREQG-----------DRREERGRRDG 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 241 RRRSEDPNRRDTPGLSQDQGRGQERRRSEDlnysntwglnQDQGRGQERRRSEDLNYRNtpalNQDQGRGQ---ERRRSE 317
Cdd:PRK12678 224 GDRRGRRRRRDRRDARGDDNREDRGDRDGD----------DGEGRGGRRGRRFRDRDRR----GRRGGDGGnerEPELRE 289
|
.
gi 568945964 318 D 318
Cdd:PRK12678 290 D 290
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CATSPERG |
pfam15064 |
Cation channel sperm-associated protein subunit gamma; This family represents the gamma ... |
733-1663 |
0e+00 |
|
Cation channel sperm-associated protein subunit gamma; This family represents the gamma subunit of the CATSPER, or cation channel sperm-associated protein complex. The complex appears only to be expressed in the flagellum of sperm. The complex is activated at alkaline intracellular pH, and being restricted to the flagellum is the mediating calcium channel.
Pssm-ID: 464479 Cd Length: 971 Bit Score: 1804.47 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 733 MSPVSPVWPRKPNLWAFWVLRLVLLLSLKSWAEDTLQHCTWLLVLNKFEKVGLHLSKDRFQDHEPIDTVAKVFQKLTDSP 812
Cdd:pfam15064 1 MSPVGPAWPRKPVLRALWALRVVLLLPWRLWAEDELQHCTWLVVLNKFEKVGLNLSSDRFFDQEPIDTVDKVFQKLVDSP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 813 IDPSENYLSFPYYLQINFSCPGQNSEELARKGHLMGMKPMVRINYMYSVNFYRWEMENLQILMEAAPMRSTGYCPAEAMC 892
Cdd:pfam15064 81 IDPSENYLGFPYYLKINYSCPGQNSEELVRKGHLTGLKPMVLVTFQSPVNFYRWKIEQLQIQMEAAPFRSTEYCPAEELC 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 893 ILNWYTPMPFKNGSVVSSVDIYTNGIGPFIPKKRFYVNMNGFLKRDASGKSLFAIGYESLVLKSSHFRLSKSRPLWYTVN 972
Cdd:pfam15064 161 VMNWYTPMPIKNGSVVMSVDIYSNGLGPFIPKKRFQVNINGFLKRDRSNKSLFAVGYESLDLKPRHFVNVPSRPLWYTVD 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 973 HAPVFILGGFYDEKAILFSDSNFQDYVLLELSIDSCWVGSFYCPILGFSATIHDAIATESTLFIRQNQLVYYFTGTYSTL 1052
Cdd:pfam15064 241 HAPVLILGGIPDEKAILFTDTNFQDFVLVELSIDSCWVGSFYCPILGFSATIYDAIATESTLFIRQNQLVYYFTGTYPTL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 1053 FDKSHGSSRWVRVLPSECIKRLCPVYFSGNGSEYVLALTTGKNEGYIHIGTITDGLVSFEMVPDGWSVCEKLPGKNCSID 1132
Cdd:pfam15064 321 HEKNHGSGRWVRVLASECIKKLCPVYFHSNGSEYVLALTTGKNEGYIHFGTITDGLVSFEMLPRGWSVCEKIPVKNCSIT 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 1133 WATYITDERNLLLLVKID---SGQFYL-VNFNTEFKTLNILYKIPEFIPEAKELDFLVLLDTVTYTNTPMTPKGLFFNTL 1208
Cdd:pfam15064 401 WATYIADDYNLLLLVEIDhntSGQYFLvVNYNTEFDTLNILYKIPEFIPDARGLEFLMILGTESYTNTPMTPKGMFFNTY 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 1209 NNMLYIWGNFILQSYNREEFIFLADFPKESTIKYMVNSFKGQMAVVTENEEIWYFLEGGYDVYQVVPSQGWRTYLKLQKM 1288
Cdd:pfam15064 481 NNLLFIWGNFLLQSYNKENYIYLADFPKELSIKYLVNSFHGDMAIVTETEEIWYLLEGSYDVYKLFPSKGWETYLSLQKM 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 1289 QKSPLYSTNESLVSLFYQDENLFQLVYLFDVGKERLVKRLLPVGTLMEYNLPKPFTVVNQGNYKMITFTNTCPFKAIHAV 1368
Cdd:pfam15064 561 QQSSFYSHNETMVTLFYEDNKLYQLVYLIDVQKGRLVKRLLPVETLLMYQLPKPYTVENQGSHLTLSFTNTCPFTAMHLQ 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 1369 DVPKKQHASRTESYVALPPLVSESLGFHNNNTLAVYQGLVYYLLWLHSKYDKPYADPVHDPTWRWWQHKTKDKDYFFYLF 1448
Cdd:pfam15064 641 DLPKPQHYTRQERYRALPPLVLESLGFHNNNSLAVYQGLVYYLLWLHSKYDKPYADPVHDPTWRWWKNKKQDQDYYFYLA 720
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 1449 SNRLAAEGIYINMNAYQKLYNMS------------------------------------GPTINVDKKLSLSLVLADPEC 1492
Cdd:pfam15064 721 SNWLSAGGVHIDMNSYEKIYNLSgeyglperifldkgtwytfsvfltargdtftssdsqGATIQVDSKVDLAVVLADPEC 800
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 1493 LSVTATREFLLNRNTLLTKIKVIDKKRCSEQGMVGRNIKKTSMLIKVLGAPGNCIQRTYLGDHIQGIRLVPIFIGCPPGK 1572
Cdd:pfam15064 801 LEAVVKQEVLLNRNSVLFKITLIDKKRCSEQGISGHHLMKTSMMIKVLGSSGHCFQNTYLGASMQGNLMVPIFIGCPPGK 880
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 1573 RLAFDVSYTIKHSEEINKHYFDCVIKDAEMPCFLFRDLFQPFFLVQDLVTGDSGSFLGSYVLKVVGGGRTLNTIRDYTEE 1652
Cdd:pfam15064 881 RLAFDITYTLKYNRLQNKHYFDCVIKDAEMPCFLFRDLFYPFFLIQDLVTGDSGSFQGSYVLKVVGGGPTLNTIRDYTEE 960
|
970
....*....|.
gi 568945964 1653 EIFRYNSPLDT 1663
Cdd:pfam15064 961 EIYRFNSPLDT 971
|
|
| Fibrinogen_BP |
pfam08017 |
Fibrinogen binding protein; Proteins in this family bind to fibrinogen. Members of this family ... |
304-666 |
7.01e-11 |
|
Fibrinogen binding protein; Proteins in this family bind to fibrinogen. Members of this family includes the fibrinogen receptor, FbsA, which mediates platelet aggregation.
Pssm-ID: 311808 [Multi-domain] Cd Length: 393 Bit Score: 66.43 E-value: 7.01e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 304 NQDQGRGQERRRSEdlnycntwGLNQDQGRGQERRLsedlsycniRDL-NQDQGRGQEWRRSEDPNHRDTRGLSQDQGRG 382
Cdd:pfam08017 24 NQSQGNVLERRQRD--------AENRSQGNVLERRQ---------RDAeNRSQGNVLERRQRDAENRSQGNVLERRQRDA 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 383 QKRRQSEDLNYCNTRGLNQDLGRGQERRLSEdlnycntrGLNEDLGRGQERRLSEdlnycntrGLNQDQGRGQERRQSKd 462
Cdd:pfam08017 87 ENRSQGNVLERRQRDAENRSQGNVLERRQRD--------AENKSQGNVLERRQRD--------AENRSQGNVLERRQRD- 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 463 wnycntwGLNQYQGRGQERRlSEDLNycntrclNQDQGRSQERRlSKDSNycntwglNQDQGHGQEKKQTEDLNYCNTRD 542
Cdd:pfam08017 150 -------AENRSQGNVLERR-QRDAE-------NRSQGNVLERR-QRDAE-------NKSQGNVLERRQRDAENRSQGNV 206
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 543 LSQGQGRGQERRRSEDPNHRDTRGLSQDQGRGQERRQSEDLNYCNTQGLNQDRGRGQERRQSEHLNYCNTWSLNQDQGRG 622
Cdd:pfam08017 207 LERRQRDAENRSQGNVLERRQRDAENRSQGNVLERRQRDAENKSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNV 286
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 568945964 623 QERRQsedplyRDTPDRSQ-DQGRGQKRKQSQDLISRTTQTLSQG 666
Cdd:pfam08017 287 LERRQ------RDAENKSQvGQLIGKNPLLSKSIISRENNHSSQG 325
|
|
| PRK12678 |
PRK12678 |
transcription termination factor Rho; Provisional |
81-318 |
1.74e-09 |
|
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 62.61 E-value: 1.74e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 81 RERTDWSEERLLCEETTGGEERPQGVERPHDQERFPRGKAGLAGRAGAEEKPPGREKGFKEKGCDEQEGQVALDPGRRSG 160
Cdd:PRK12678 84 AAAARQAEQPAAEAAAAKAEAAPAARAAAAAAAEAASAPEAAQARERRERGEAARRGAARKAGEGGEQPATEARADAAER 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 161 QDQGRGQEWRRSEDPnycntwGLNQDQGRGQERRLSEGlnyRNTPALNQDQGRGQERRlsedlnycntrDLNQDQGRGQE 240
Cdd:PRK12678 164 TEEEERDERRRRGDR------EDRQAEAERGERGRREE---RGRDGDDRDRRDRREQG-----------DRREERGRRDG 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 241 RRRSEDPNRRDTPGLSQDQGRGQERRRSEDlnysntwglnQDQGRGQERRRSEDLNYRNtpalNQDQGRGQ---ERRRSE 317
Cdd:PRK12678 224 GDRRGRRRRRDRRDARGDDNREDRGDRDGD----------DGEGRGGRRGRRFRDRDRR----GRRGGDGGnerEPELRE 289
|
.
gi 568945964 318 D 318
Cdd:PRK12678 290 D 290
|
|
| PRK12678 |
PRK12678 |
transcription termination factor Rho; Provisional |
209-414 |
3.84e-08 |
|
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 58.38 E-value: 3.84e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 209 QDQGRGQERRLSEDlnycNTRDLNQDQGRGQERRRSEDPNRRDTPGLSQDQGRGQERRRSEDlnysntwglNQDQGRGQE 288
Cdd:PRK12678 129 ERRERGEAARRGAA----RKAGEGGEQPATEARADAAERTEEEERDERRRRGDREDRQAEAE---------RGERGRREE 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 289 RRRSEDlnyRNTPALNQDQGRGQERRRSEDLNycntwglnQDQGRGQERRlsedlsycnirdlnQDQGRGQEWRRSEDPN 368
Cdd:PRK12678 196 RGRDGD---DRDRRDRREQGDRREERGRRDGG--------DRRGRRRRRD--------------RRDARGDDNREDRGDR 250
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 568945964 369 HRDTRglsqDQGRGQKRRQSEDLNycNTRGLNQDLGRGQERRLSED 414
Cdd:PRK12678 251 DGDDG----EGRGGRRGRRFRDRD--RRGRRGGDGGNEREPELRED 290
|
|
| Fibrinogen_BP |
pfam08017 |
Fibrinogen binding protein; Proteins in this family bind to fibrinogen. Members of this family ... |
128-390 |
1.44e-07 |
|
Fibrinogen binding protein; Proteins in this family bind to fibrinogen. Members of this family includes the fibrinogen receptor, FbsA, which mediates platelet aggregation.
Pssm-ID: 311808 [Multi-domain] Cd Length: 393 Bit Score: 56.03 E-value: 1.44e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 128 AEEKPPGREKGFKEKGCDEQEGQVALDPGRRSGQDQGRGQ--EWRRSEDPNYCNTWGLNQDQGRGQERRLSEGLNYRNTP 205
Cdd:pfam08017 38 AENRSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNvlERRQRDAENRSQGNVLERRQRDAENRSQGNVLERRQRD 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 206 ALNQDQGRGQERRLSEDLNYCNTRDLNQDQGRGQERRRSEDPNRRDTPGLSQDQGRGQERRRSEDLNYSNTWGLNQDQGR 285
Cdd:pfam08017 118 AENKSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNVLERRQRDAENKSQGNVLERRQRD 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 286 GQERRRSEDLNYRNTPALNQDQGRGQERRRSEdlnycntwGLNQDQGRGQERRL--SEDLSYCNIRDLNQDQGRGQEWRR 363
Cdd:pfam08017 198 AENRSQGNVLERRQRDAENRSQGNVLERRQRD--------AENRSQGNVLERRQrdAENKSQGNVLERRQRDAENRSQGN 269
|
250 260
....*....|....*....|....*..
gi 568945964 364 SEDPNHRDTRGLSQDQGRGQKRRQSED 390
Cdd:pfam08017 270 VLERRQRDAENRSQGNVLERRQRDAEN 296
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CATSPERG |
pfam15064 |
Cation channel sperm-associated protein subunit gamma; This family represents the gamma ... |
733-1663 |
0e+00 |
|
Cation channel sperm-associated protein subunit gamma; This family represents the gamma subunit of the CATSPER, or cation channel sperm-associated protein complex. The complex appears only to be expressed in the flagellum of sperm. The complex is activated at alkaline intracellular pH, and being restricted to the flagellum is the mediating calcium channel.
Pssm-ID: 464479 Cd Length: 971 Bit Score: 1804.47 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 733 MSPVSPVWPRKPNLWAFWVLRLVLLLSLKSWAEDTLQHCTWLLVLNKFEKVGLHLSKDRFQDHEPIDTVAKVFQKLTDSP 812
Cdd:pfam15064 1 MSPVGPAWPRKPVLRALWALRVVLLLPWRLWAEDELQHCTWLVVLNKFEKVGLNLSSDRFFDQEPIDTVDKVFQKLVDSP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 813 IDPSENYLSFPYYLQINFSCPGQNSEELARKGHLMGMKPMVRINYMYSVNFYRWEMENLQILMEAAPMRSTGYCPAEAMC 892
Cdd:pfam15064 81 IDPSENYLGFPYYLKINYSCPGQNSEELVRKGHLTGLKPMVLVTFQSPVNFYRWKIEQLQIQMEAAPFRSTEYCPAEELC 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 893 ILNWYTPMPFKNGSVVSSVDIYTNGIGPFIPKKRFYVNMNGFLKRDASGKSLFAIGYESLVLKSSHFRLSKSRPLWYTVN 972
Cdd:pfam15064 161 VMNWYTPMPIKNGSVVMSVDIYSNGLGPFIPKKRFQVNINGFLKRDRSNKSLFAVGYESLDLKPRHFVNVPSRPLWYTVD 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 973 HAPVFILGGFYDEKAILFSDSNFQDYVLLELSIDSCWVGSFYCPILGFSATIHDAIATESTLFIRQNQLVYYFTGTYSTL 1052
Cdd:pfam15064 241 HAPVLILGGIPDEKAILFTDTNFQDFVLVELSIDSCWVGSFYCPILGFSATIYDAIATESTLFIRQNQLVYYFTGTYPTL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 1053 FDKSHGSSRWVRVLPSECIKRLCPVYFSGNGSEYVLALTTGKNEGYIHIGTITDGLVSFEMVPDGWSVCEKLPGKNCSID 1132
Cdd:pfam15064 321 HEKNHGSGRWVRVLASECIKKLCPVYFHSNGSEYVLALTTGKNEGYIHFGTITDGLVSFEMLPRGWSVCEKIPVKNCSIT 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 1133 WATYITDERNLLLLVKID---SGQFYL-VNFNTEFKTLNILYKIPEFIPEAKELDFLVLLDTVTYTNTPMTPKGLFFNTL 1208
Cdd:pfam15064 401 WATYIADDYNLLLLVEIDhntSGQYFLvVNYNTEFDTLNILYKIPEFIPDARGLEFLMILGTESYTNTPMTPKGMFFNTY 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 1209 NNMLYIWGNFILQSYNREEFIFLADFPKESTIKYMVNSFKGQMAVVTENEEIWYFLEGGYDVYQVVPSQGWRTYLKLQKM 1288
Cdd:pfam15064 481 NNLLFIWGNFLLQSYNKENYIYLADFPKELSIKYLVNSFHGDMAIVTETEEIWYLLEGSYDVYKLFPSKGWETYLSLQKM 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 1289 QKSPLYSTNESLVSLFYQDENLFQLVYLFDVGKERLVKRLLPVGTLMEYNLPKPFTVVNQGNYKMITFTNTCPFKAIHAV 1368
Cdd:pfam15064 561 QQSSFYSHNETMVTLFYEDNKLYQLVYLIDVQKGRLVKRLLPVETLLMYQLPKPYTVENQGSHLTLSFTNTCPFTAMHLQ 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 1369 DVPKKQHASRTESYVALPPLVSESLGFHNNNTLAVYQGLVYYLLWLHSKYDKPYADPVHDPTWRWWQHKTKDKDYFFYLF 1448
Cdd:pfam15064 641 DLPKPQHYTRQERYRALPPLVLESLGFHNNNSLAVYQGLVYYLLWLHSKYDKPYADPVHDPTWRWWKNKKQDQDYYFYLA 720
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 1449 SNRLAAEGIYINMNAYQKLYNMS------------------------------------GPTINVDKKLSLSLVLADPEC 1492
Cdd:pfam15064 721 SNWLSAGGVHIDMNSYEKIYNLSgeyglperifldkgtwytfsvfltargdtftssdsqGATIQVDSKVDLAVVLADPEC 800
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 1493 LSVTATREFLLNRNTLLTKIKVIDKKRCSEQGMVGRNIKKTSMLIKVLGAPGNCIQRTYLGDHIQGIRLVPIFIGCPPGK 1572
Cdd:pfam15064 801 LEAVVKQEVLLNRNSVLFKITLIDKKRCSEQGISGHHLMKTSMMIKVLGSSGHCFQNTYLGASMQGNLMVPIFIGCPPGK 880
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 1573 RLAFDVSYTIKHSEEINKHYFDCVIKDAEMPCFLFRDLFQPFFLVQDLVTGDSGSFLGSYVLKVVGGGRTLNTIRDYTEE 1652
Cdd:pfam15064 881 RLAFDITYTLKYNRLQNKHYFDCVIKDAEMPCFLFRDLFYPFFLIQDLVTGDSGSFQGSYVLKVVGGGPTLNTIRDYTEE 960
|
970
....*....|.
gi 568945964 1653 EIFRYNSPLDT 1663
Cdd:pfam15064 961 EIYRFNSPLDT 971
|
|
| Fibrinogen_BP |
pfam08017 |
Fibrinogen binding protein; Proteins in this family bind to fibrinogen. Members of this family ... |
304-666 |
7.01e-11 |
|
Fibrinogen binding protein; Proteins in this family bind to fibrinogen. Members of this family includes the fibrinogen receptor, FbsA, which mediates platelet aggregation.
Pssm-ID: 311808 [Multi-domain] Cd Length: 393 Bit Score: 66.43 E-value: 7.01e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 304 NQDQGRGQERRRSEdlnycntwGLNQDQGRGQERRLsedlsycniRDL-NQDQGRGQEWRRSEDPNHRDTRGLSQDQGRG 382
Cdd:pfam08017 24 NQSQGNVLERRQRD--------AENRSQGNVLERRQ---------RDAeNRSQGNVLERRQRDAENRSQGNVLERRQRDA 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 383 QKRRQSEDLNYCNTRGLNQDLGRGQERRLSEdlnycntrGLNEDLGRGQERRLSEdlnycntrGLNQDQGRGQERRQSKd 462
Cdd:pfam08017 87 ENRSQGNVLERRQRDAENRSQGNVLERRQRD--------AENKSQGNVLERRQRD--------AENRSQGNVLERRQRD- 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 463 wnycntwGLNQYQGRGQERRlSEDLNycntrclNQDQGRSQERRlSKDSNycntwglNQDQGHGQEKKQTEDLNYCNTRD 542
Cdd:pfam08017 150 -------AENRSQGNVLERR-QRDAE-------NRSQGNVLERR-QRDAE-------NKSQGNVLERRQRDAENRSQGNV 206
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 543 LSQGQGRGQERRRSEDPNHRDTRGLSQDQGRGQERRQSEDLNYCNTQGLNQDRGRGQERRQSEHLNYCNTWSLNQDQGRG 622
Cdd:pfam08017 207 LERRQRDAENRSQGNVLERRQRDAENRSQGNVLERRQRDAENKSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNV 286
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 568945964 623 QERRQsedplyRDTPDRSQ-DQGRGQKRKQSQDLISRTTQTLSQG 666
Cdd:pfam08017 287 LERRQ------RDAENKSQvGQLIGKNPLLSKSIISRENNHSSQG 325
|
|
| PRK12678 |
PRK12678 |
transcription termination factor Rho; Provisional |
81-318 |
1.74e-09 |
|
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 62.61 E-value: 1.74e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 81 RERTDWSEERLLCEETTGGEERPQGVERPHDQERFPRGKAGLAGRAGAEEKPPGREKGFKEKGCDEQEGQVALDPGRRSG 160
Cdd:PRK12678 84 AAAARQAEQPAAEAAAAKAEAAPAARAAAAAAAEAASAPEAAQARERRERGEAARRGAARKAGEGGEQPATEARADAAER 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 161 QDQGRGQEWRRSEDPnycntwGLNQDQGRGQERRLSEGlnyRNTPALNQDQGRGQERRlsedlnycntrDLNQDQGRGQE 240
Cdd:PRK12678 164 TEEEERDERRRRGDR------EDRQAEAERGERGRREE---RGRDGDDRDRRDRREQG-----------DRREERGRRDG 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 241 RRRSEDPNRRDTPGLSQDQGRGQERRRSEDlnysntwglnQDQGRGQERRRSEDLNYRNtpalNQDQGRGQ---ERRRSE 317
Cdd:PRK12678 224 GDRRGRRRRRDRRDARGDDNREDRGDRDGD----------DGEGRGGRRGRRFRDRDRR----GRRGGDGGnerEPELRE 289
|
.
gi 568945964 318 D 318
Cdd:PRK12678 290 D 290
|
|
| PRK12678 |
PRK12678 |
transcription termination factor Rho; Provisional |
117-391 |
7.81e-09 |
|
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 60.69 E-value: 7.81e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 117 RGKAGLAGRAGAEEKPPGREKGFKEKGCDEQEGQVALD--PGRRSGQDQGRGQEWRRSEDPNycntwgLNQDQGRGQERR 194
Cdd:PRK12678 59 RGGGAAAAAATPAAPAAAARRAARAAAAARQAEQPAAEaaAAKAEAAPAARAAAAAAAEAAS------APEAAQARERRE 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 195 lseglnyrntpalNQDQGRGQERRLSEDLNYCNTRDLNQDQGRGQERRRSEDPNRRDTPGLSQDQGRGQERRRSEDLNYS 274
Cdd:PRK12678 133 -------------RGEAARRGAARKAGEGGEQPATEARADAAERTEEEERDERRRRGDREDRQAEAERGERGRREERGRD 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 275 ntwglNQDQGRGQERRRSEDLNYRNTPALNQDQGRGQERRRSEDlnycntwglNQDQGRGQERRLSEDlsycnirdlNQD 354
Cdd:PRK12678 200 -----GDDRDRRDRREQGDRREERGRRDGGDRRGRRRRRDRRDA---------RGDDNREDRGDRDGD---------DGE 256
|
250 260 270
....*....|....*....|....*....|....*..
gi 568945964 355 QGRGQEWRRSEDPNHRDTRGLSQDQGRGQKRRQSEDL 391
Cdd:PRK12678 257 GRGGRRGRRFRDRDRRGRRGGDGGNEREPELREDDVL 293
|
|
| Fibrinogen_BP |
pfam08017 |
Fibrinogen binding protein; Proteins in this family bind to fibrinogen. Members of this family ... |
161-459 |
1.55e-08 |
|
Fibrinogen binding protein; Proteins in this family bind to fibrinogen. Members of this family includes the fibrinogen receptor, FbsA, which mediates platelet aggregation.
Pssm-ID: 311808 [Multi-domain] Cd Length: 393 Bit Score: 59.11 E-value: 1.55e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 161 QDQGRGQEWRRSEDPNYCNTWGLNQDQGRGQERRLSEGLNYRNTPALNQDQGRGQERRlsedlnycnTRDL-NQDQGRGQ 239
Cdd:pfam08017 25 QSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNVLERR---------QRDAeNRSQGNVL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 240 ERRRSEDPNRrdtpglsqDQGRGQERRRSEDLNYSNTWGLNQDQGRGQERRRSEDLNYRNTPALNQDQGRGQERRRsEDL 319
Cdd:pfam08017 96 ERRQRDAENR--------SQGNVLERRQRDAENKSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNVLERRQ-RDA 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 320 NycntwglNQDQGRGQERRLsedlsycniRDL-NQDQGRGQEWRRSEDPNHRDTRGLSQDQGRGQKRRQSEDLNYCNTRG 398
Cdd:pfam08017 167 E-------NRSQGNVLERRQ---------RDAeNKSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNVLERRQRDA 230
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568945964 399 LNQDLGRGQERRLSEDLNYCNTRGLNEDLGRGQERRLSEDLNYCNTRGLNQDQGRGQERRQ 459
Cdd:pfam08017 231 ENRSQGNVLERRQRDAENKSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNVLERRQ 291
|
|
| PRK12678 |
PRK12678 |
transcription termination factor Rho; Provisional |
209-414 |
3.84e-08 |
|
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 58.38 E-value: 3.84e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 209 QDQGRGQERRLSEDlnycNTRDLNQDQGRGQERRRSEDPNRRDTPGLSQDQGRGQERRRSEDlnysntwglNQDQGRGQE 288
Cdd:PRK12678 129 ERRERGEAARRGAA----RKAGEGGEQPATEARADAAERTEEEERDERRRRGDREDRQAEAE---------RGERGRREE 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 289 RRRSEDlnyRNTPALNQDQGRGQERRRSEDLNycntwglnQDQGRGQERRlsedlsycnirdlnQDQGRGQEWRRSEDPN 368
Cdd:PRK12678 196 RGRDGD---DRDRRDRREQGDRREERGRRDGG--------DRRGRRRRRD--------------RRDARGDDNREDRGDR 250
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 568945964 369 HRDTRglsqDQGRGQKRRQSEDLNycNTRGLNQDLGRGQERRLSED 414
Cdd:PRK12678 251 DGDDG----EGRGGRRGRRFRDRD--RRGRRGGDGGNEREPELRED 290
|
|
| PRK12678 |
PRK12678 |
transcription termination factor Rho; Provisional |
233-438 |
3.97e-08 |
|
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 58.38 E-value: 3.97e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 233 QDQGRGQERRRSEDPNRRDTPGLSQDQGRGQERRRSEDlnysntwglNQDQGRGQERRRSEDlnyRNTPALNQDQGRGQE 312
Cdd:PRK12678 122 PEAAQARERRERGEAARRGAARKAGEGGEQPATEARAD---------AAERTEEEERDERRR---RGDREDRQAEAERGE 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 313 RRRSEDlnycntwglnqDQGRGQERRlsedlsycniRDLNQDQGRGQEWRRSEDPNHRDTRGlsQDQGRGQKRRQSEDLN 392
Cdd:PRK12678 190 RGRREE-----------RGRDGDDRD----------RRDRREQGDRREERGRRDGGDRRGRR--RRRDRRDARGDDNRED 246
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 568945964 393 YCNTRGLNQDLGRGQERRLSEDLNycNTRGLNEDLGRGQERRLSED 438
Cdd:PRK12678 247 RGDRDGDDGEGRGGRRGRRFRDRD--RRGRRGGDGGNEREPELRED 290
|
|
| PRK12678 |
PRK12678 |
transcription termination factor Rho; Provisional |
94-342 |
5.30e-08 |
|
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 57.99 E-value: 5.30e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 94 EETTGGEERPQGVERPHDQERFPRGKAGLAGRAGAEEKPPGREKGFKEKGCDEQEGQVALDPGRRSGQDQGRGQEwRRSE 173
Cdd:PRK12678 68 ATPAAPAAAARRAARAAAAARQAEQPAAEAAAAKAEAAPAARAAAAAAAEAASAPEAAQARERRERGEAARRGAA-RKAG 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 174 DPNYCNTWGLNQDQGRGQERRLSEGLNYRNTPALNQDQGRGQERRLSEDlnycnTRDLNQDQGRGQERRRSEDPNRRDtp 253
Cdd:PRK12678 147 EGGEQPATEARADAAERTEEEERDERRRRGDREDRQAEAERGERGRREE-----RGRDGDDRDRRDRREQGDRREERG-- 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 254 glSQDQGRGQERRRsedlnysntwglNQDQGRGQERRRSEDLNYRNTPALNQDQGRGQERRRSEDlnycNTWGLNQDQGR 333
Cdd:PRK12678 220 --RRDGGDRRGRRR------------RRDRRDARGDDNREDRGDRDGDDGEGRGGRRGRRFRDRD----RRGRRGGDGGN 281
|
....*....
gi 568945964 334 GQERRLSED 342
Cdd:PRK12678 282 EREPELRED 290
|
|
| Fibrinogen_BP |
pfam08017 |
Fibrinogen binding protein; Proteins in this family bind to fibrinogen. Members of this family ... |
128-390 |
1.44e-07 |
|
Fibrinogen binding protein; Proteins in this family bind to fibrinogen. Members of this family includes the fibrinogen receptor, FbsA, which mediates platelet aggregation.
Pssm-ID: 311808 [Multi-domain] Cd Length: 393 Bit Score: 56.03 E-value: 1.44e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 128 AEEKPPGREKGFKEKGCDEQEGQVALDPGRRSGQDQGRGQ--EWRRSEDPNYCNTWGLNQDQGRGQERRLSEGLNYRNTP 205
Cdd:pfam08017 38 AENRSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNvlERRQRDAENRSQGNVLERRQRDAENRSQGNVLERRQRD 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 206 ALNQDQGRGQERRLSEDLNYCNTRDLNQDQGRGQERRRSEDPNRRDTPGLSQDQGRGQERRRSEDLNYSNTWGLNQDQGR 285
Cdd:pfam08017 118 AENKSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNVLERRQRDAENKSQGNVLERRQRD 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 286 GQERRRSEDLNYRNTPALNQDQGRGQERRRSEdlnycntwGLNQDQGRGQERRL--SEDLSYCNIRDLNQDQGRGQEWRR 363
Cdd:pfam08017 198 AENRSQGNVLERRQRDAENRSQGNVLERRQRD--------AENRSQGNVLERRQrdAENKSQGNVLERRQRDAENRSQGN 269
|
250 260
....*....|....*....|....*..
gi 568945964 364 SEDPNHRDTRGLSQDQGRGQKRRQSED 390
Cdd:pfam08017 270 VLERRQRDAENRSQGNVLERRQRDAEN 296
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
197-439 |
2.23e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 53.22 E-value: 2.23e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 197 EGLNYRNTPALNQdqgRGQERRLS---EDLNYCNTRDLNQDQGRGQERRRSEDPNRRDTPGLSQDQGRGQERRRSEDLNY 273
Cdd:PTZ00121 1053 DGNHEGKAEAKAH---VGQDEGLKpsyKDFDFDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARK 1129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 274 SNTWGLNQDQGRGQERRRSEDLNYRNTPALNQDQGRGQERRRSEDLNYCNTWGLNQDQGRGQERRLSEDLSYCNIRDLNQ 353
Cdd:PTZ00121 1130 AEEARKAEDARKAEEARKAEDAKRVEIARKAEDARKAEEARKAEDAKKAEAARKAEEVRKAEELRKAEDARKAEAARKAE 1209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 354 DQGRGQEWRRSEDPNH-------RDTRGLSQDQGRGQKRRQSEDLNYCNTRGL-----NQDLGRGQERRLSEDLNYCNTR 421
Cdd:PTZ00121 1210 EERKAEEARKAEDAKKaeavkkaEEAKKDAEEAKKAEEERNNEEIRKFEEARMahfarRQAAIKAEEARKADELKKAEEK 1289
|
250
....*....|....*...
gi 568945964 422 GLNEDLGRGQERRLSEDL 439
Cdd:PTZ00121 1290 KKADEAKKAEEKKKADEA 1307
|
|
| Fibrinogen_BP |
pfam08017 |
Fibrinogen binding protein; Proteins in this family bind to fibrinogen. Members of this family ... |
41-320 |
4.02e-06 |
|
Fibrinogen binding protein; Proteins in this family bind to fibrinogen. Members of this family includes the fibrinogen receptor, FbsA, which mediates platelet aggregation.
Pssm-ID: 311808 [Multi-domain] Cd Length: 393 Bit Score: 51.40 E-value: 4.02e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 41 QERPRDQERSPGRDTNWGKERIVYErgfgKERAKWEDRSGRERTDWSEERLLCEETTGGEERPQG---VERPHDQERFPR 117
Cdd:pfam08017 32 ERRQRDAENRSQGNVLERRQRDAEN----RSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGnvlERRQRDAENRSQ 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 118 GKAGLAGRAGAEEKPPGREKGFKEKGCDEQEGQVALDPGRRSGQDQGRGQ--EWRRSEDPNYCNTWGLNQDQGRGQERRL 195
Cdd:pfam08017 108 GNVLERRQRDAENKSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNvlERRQRDAENRSQGNVLERRQRDAENKSQ 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 196 SEGLNYRNTPALNQDQGRGQERRlsedlnycnTRDL-NQDQGRGQERRRSEDPNRrdtpglsqDQGRGQERRRSEDLNYS 274
Cdd:pfam08017 188 GNVLERRQRDAENRSQGNVLERR---------QRDAeNRSQGNVLERRQRDAENR--------SQGNVLERRQRDAENKS 250
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 568945964 275 NTWGLNQDQGRGQERRRSEDLNYRNTPALNQDQGRGQERRRSEDLN 320
Cdd:pfam08017 251 QGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNVLERRQRDAEN 296
|
|
| PRK12678 |
PRK12678 |
transcription termination factor Rho; Provisional |
239-459 |
6.12e-06 |
|
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 51.06 E-value: 6.12e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 239 QERRRSEDPNRRDTPGLSQDQGRGQERRRSEDlnysntwglnQDQGRGQERRRSEDLNYRNTPALNQDQGRGQERRRSEd 318
Cdd:PRK12678 102 AEAAPAARAAAAAAAEAASAPEAAQARERRER----------GEAARRGAARKAGEGGEQPATEARADAAERTEEEERD- 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 319 lnycntwglNQDQGRGQERRlsedlsycNIRDLNQDQGRGQEWRRSEDPNHRDTRglsqdQGRGQKRRQSEDLNYCNTRG 398
Cdd:PRK12678 171 ---------ERRRRGDREDR--------QAEAERGERGRREERGRDGDDRDRRDR-----REQGDRREERGRRDGGDRRG 228
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568945964 399 LNQDLGRGQERRLSEDLNYCNTRGLNEDLGRGQERRLSEDLNYCNTRGLNQDQGRGQERRQ 459
Cdd:PRK12678 229 RRRRRDRRDARGDDNREDRGDRDGDDGEGRGGRRGRRFRDRDRRGRRGGDGGNEREPELRE 289
|
|
| PRK12678 |
PRK12678 |
transcription termination factor Rho; Provisional |
497-649 |
2.35e-04 |
|
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 46.05 E-value: 2.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 497 QDQGRSQERRLSKDSNYCNTWGLNQDQGHGQEKKQTEDLNYCNTRDLSQGQGRGQERRRSEDPNHRDTRGLSQDQGRGQE 576
Cdd:PRK12678 134 GEAARRGAARKAGEGGEQPATEARADAAERTEEEERDERRRRGDREDRQAEAERGERGRREERGRDGDDRDRRDRREQGD 213
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568945964 577 RRQSEDlnycntqglNQDRGRGQERRQsehlnycntwslNQDQGRGQERRQSEDPLYRDTPDRSQDQGRGQKR 649
Cdd:PRK12678 214 RREERG---------RRDGGDRRGRRR------------RRDRRDARGDDNREDRGDRDGDDGEGRGGRRGRR 265
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
232-582 |
3.00e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 45.90 E-value: 3.00e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 232 NQDQGRGqERRRSEDPNRRDTPGLSQDQGRGQERRRsEDLNYSNTWGLNQD-----QGRGQERRRSEDLNYRNtpalnQD 306
Cdd:PTZ00121 1054 GNHEGKA-EAKAHVGQDEGLKPSYKDFDFDAKEDNR-ADEATEEAFGKAEEakkteTGKAEEARKAEEAKKKA-----ED 1126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 307 QGRGQERRRSEDLNycntwglnqdqgRGQERRLSEDLSYCNIRDLNQDQGRGQEWRRSEDPNHRDTRGLSQDQGRGQKRR 386
Cdd:PTZ00121 1127 ARKAEEARKAEDAR------------KAEEARKAEDAKRVEIARKAEDARKAEEARKAEDAKKAEAARKAEEVRKAEELR 1194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 387 QSEDlnycnTRGLNQDLGRGQERRLSEDLNYcntrglnEDLGRGQERRLSEDLNYCNTRGLNQDQGRGQERRQSKDWNYC 466
Cdd:PTZ00121 1195 KAED-----ARKAEAARKAEEERKAEEARKA-------EDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARM 1262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 467 NTWGLNQYQGRGQERRLSEDLNYCNTRCLNQDQGRSQERRLSKDSnycntwglnqdQGHGQEKKQTEDLNycntRDLSQG 546
Cdd:PTZ00121 1263 AHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEA-----------KKKAEEAKKADEAK----KKAEEA 1327
|
330 340 350
....*....|....*....|....*....|....*..
gi 568945964 547 QGRGQE-RRRSEDPNHRDTRGLSQDQGRGQERRQSED 582
Cdd:PTZ00121 1328 KKKADAaKKKAEEAKKAAEAAKAEAEAAADEAEAAEE 1364
|
|
| Fibrinogen_BP |
pfam08017 |
Fibrinogen binding protein; Proteins in this family bind to fibrinogen. Members of this family ... |
41-274 |
3.41e-03 |
|
Fibrinogen binding protein; Proteins in this family bind to fibrinogen. Members of this family includes the fibrinogen receptor, FbsA, which mediates platelet aggregation.
Pssm-ID: 311808 [Multi-domain] Cd Length: 393 Bit Score: 41.77 E-value: 3.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 41 QERPRDQERSPGRDTNWGKERIVYERGFGKERakweDRSGRERTDWSEERLLCEETTGGEERPQG---VERPHDQERFPR 117
Cdd:pfam08017 64 ERRQRDAENRSQGNVLERRQRDAENRSQGNVL----ERRQRDAENRSQGNVLERRQRDAENKSQGnvlERRQRDAENRSQ 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945964 118 GKAGLAGRAGAEEKPPGREKGFKEKGCDEQEGQVALDPGRRSGQDQGRGQ--EWRRSEDPNYCNTWGLNQDQGRGQERRL 195
Cdd:pfam08017 140 GNVLERRQRDAENRSQGNVLERRQRDAENRSQGNVLERRQRDAENKSQGNvlERRQRDAENRSQGNVLERRQRDAENRSQ 219
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568945964 196 SEGLNYRNTPALNQDQGRGQERRLSEDLNYCNTRDLNQDQGRGQERRRSEDPNRRDTPGLSQDQGRGQERRRSEDLNYS 274
Cdd:pfam08017 220 GNVLERRQRDAENRSQGNVLERRQRDAENKSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNVLERRQRDAENKS 298
|
|
| |
