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Concise Results
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nipped-B-like protein isoform X2 [Homo sapiens]
Protein Classification
List of domain hits
Name
Accession
Description
Interval
E-value
SCC2
cd23958 Sister chromatid cohesion protein 2 and homologs; This family includes Sister chromatid ...
1197-2407
0e+00
Sister chromatid cohesion protein 2 and homologs; This family includes Sister chromatid cohesion protein 2 (Scc2) and its homolog (Scc2 homolog, also called Nipped-B-like protein or NIPBL). Scc2/NIPBL and Scc4 form a complex that is responsible for loading the cohesin protein onto sister chromatids during mitosis and meiosis. Cohesin is a ring-shaped protein complex that encircles the sister chromatids and helps to hold them together until they are ready to be separated during cell division. In addition to its role in chromosome segregation, cohesin also plays important roles in other cellular processes such as transcription, chromosome condensation, and DNA repair.
Pssm-ID: 467937 [Multi-domain]
Cd Length: 1197
Bit Score: 1438.63
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 1197 V KV L N ILE K NI Q DG SK L S t L LNHNNDTEE EERLW RDLIME R VTKS ADA C LT tin I M TSP NM PK AV Y I ED V IERV IQYT KF 1276
Cdd:cd23958 3 V RL L T ILE R NI R DG ES L D - L DLDESQEDD EERLW LLERID R ALEA ADA S LT --- I L TSP GL PK QL Y S ED L IERV VDFL KF 78
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 1277 H L Q NT L YP Q YDPVYR L D PHGGGL lss K A KRAK C S TH K QRVIVM L Y NK V C DIV S S L S ELL EI Q L LTD TT ILQ VSSMG I T PF 1356
Cdd:cd23958 79 Q L E NT I YP A YDPVYR S D SSAKAG --- K K KRAK A S SK K KKSVST L L NK L C ELL S L L A ELL SL Q S LTD SV ILQ LVYLA I S PF 155
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 1357 FVE ---- NV S ELQL C A I KL V T AV FSRY EKH RQ L I L EEI FT SLA R LP T SKR S LR N FRLN SSD mdgepm Y IQMVTAL V LQL I 1432
Cdd:cd23958 156 FVE navs NV D ELQL S A L KL L T SI FSRY PDQ RQ F I I EEI LS SLA K LP S SKR N LR Q FRLN DGK ------ S IQMVTAL L LQL V 229
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 1433 Q CV V H LP SS EK D S N ----- A E EDSNKKI D QDVVITN SYE T A M R T A QN FLS IF L K KC GS K -- QGEE DYRPLFENFVQDLL S 1505
Cdd:cd23958 230 Q SS V K LP NL EK E S S rdksl E E DSDELLE D EESALAK SYE S A V R I A SY FLS FL L Q KC TK K kk EKDT DYRPLFENFVQDLL T 309
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 1506 TV N K PEWPAAELLLSLLGRLLV HQ FSNK S T EMAL RV AS LD Y LG TV AARLRKDA VT skmdqgsierilkqvsggedei QQ L 1585
Cdd:cd23958 310 VL N L PEWPAAELLLSLLGRLLV SI FSNK K T DANA RV MA LD L LG LI AARLRKDA LA ---------------------- EE L 367
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 1586 QKALLDYL D EN TET DPSL VFS R K FY I AQW F RD TTL E T EKA M K sqkdeessegthh A K E I E T T GQIMHRA E N RKKFL rsii 1665
Cdd:cd23958 368 QKALLDYL A EN SSS DPSL ESA R G FY L AQW L RD LSN E L EKA E K ------------- A A E E E D T ILKLELS E L RKKFL ---- 430
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 1666 ktt P S QFSTLKMNSDTVDYD DA C L IV R Y LAS M RP FA QSFD IY L T Q I L RV L G E N A IAV RTKA M K C LS E VV AV DPSIL ARL D 1745
Cdd:cd23958 431 --- D S KILSKEEEASPLSRE DA K L LY R A LAS Q RP LS QSFD PI L K Q L L SS L D E P A VTL RTKA L K A LS L VV EA DPSIL GDP D 507
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 1746 M QR G V H GRL M D N S T SVREAAVEL L G RFVLC RP Q LAEQYY D M LI ERILDTG I SVRKRVIKILRDI CIEQ P T F PKITEM CV K 1825
Cdd:cd23958 508 V QR A V E GRL L D S S A SVREAAVEL V G KYISS RP D LAEQYY E M IA ERILDTG V SVRKRVIKILRDI YLRT P D F EIKVDI CV R 587
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 1826 MI RR V ND - EE G IK K L VNE TFQ K LWFTP T P HN ----- DKE AMTRKI L N I T DVVAACR d T G Y D WF EQLL QN LLKS E ED SSY K 1899
Cdd:cd23958 588 LL RR I ND e EE S IK D L ARK TFQ E LWFTP F P ES sspaq DKE SLAERV L L I V DVVAACR - K G L D LL EQLL KR LLKS K ED KED K 666
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 1900 P V K KAC T QLVD N LVE H IL KY EE SLAD S dnkgv NSGR LVAC IT TL F LF S K IR P - Q L M V K HA M T M QPYL TT KCST QN D FM V I 1978
Cdd:cd23958 667 S V R KAC K QLVD C LVE L IL EL EE DDDE S ----- SESD LVAC LS TL H LF A K AD P k L L L V E HA E T L QPYL KS KCST RE D QQ V L 741
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 1979 CN V AK IL EL V V PL ME HPSE T FL ATI EEDL M KL II K YGM TV V Q HCVS CL G AVVNK V T Q N FKFVWACFNRYYGAIS K L K S Q H 2058
Cdd:cd23958 742 RY V LR IL RS V L PL LS HPSE S FL EEL EEDL L KL LL K HSV TV L Q EAIA CL C AVVNK L T K N YERLRKALQSCLKLLR K Y K R Q A 821
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 2059 QE DP NNT sll TNK P A LLR S L FTV G A L C R HF DFD L E DFKGN ----- S K VNI K DK V LE LL MY FTK HS - DE E V QT KA IIG LGF 2132
Cdd:cd23958 822 NL DP SSL --- KED P K LLR L L YIL G L L A R YC DFD S E RDDFE kaplk T K ESV K EL V FD LL LF FTK PP i DE D V RK KA LQA LGF 898
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 2133 AF I Q HP S L MFEQ EV KN L YNN IL SD kn S S VN LK I QVL K NLQ TY LQ E E DT RM QQ AD RD WKK VA K Q ----- E D L KEMGD VS SG 2207
Cdd:cd23958 899 LC I A HP K L FLSP EV LK L LDE IL AS -- G S LK LK L QVL R NLQ EF LQ A E EK RM EA AD AE WKK NS K A advkv L D G KEMGD AD SG 976
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 2208 MS SSIMQ L YLK QV LE AFFHTQ S S VR HF AL N V IA L T L N QGL I HP V QCVP Y LIA MG TDP E PA M R NK A DQQ L V E IDK KY AGFI 2287
Cdd:cd23958 977 VA SSIMQ R YLK DI LE LCLSSD S Q VR LA AL K V LE L I L R QGL V HP I QCVP T LIA LE TDP N PA I R KL A LRL L K E LHE KY ESLV 1056
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 2288 HM K AVA G MKMSY Q V Q QAINT cl KDPV RGFR Q D ESSS AL CSH LYS MI RGNR QH RR A FL I SLL N LFD D ------ TAKT D VTM 2361
Cdd:cd23958 1057 ES K YLE G VRLAF Q Y Q KRLAG -- DTRG RGFR T D SPPT AL LGR LYS LL RGNR KS RR K FL K SLL K LFD F dlkkss DSPS D LDF 1134
1210 1220 1230 1240
....*....|....*....|....*....|....*....|....*..
gi 578809903 2362 LL YI A D NLA CF PYQTQ E EPLF IM H H ID IT LSV S GS N LLQ SF - K E S MV 2407
Cdd:cd23958 1135 LL FL A E NLA FL PYQTQ D EPLF VI H T ID RI LSV T GS S LLQ AI a K A S QA 1181
PspC_subgroup_2 super family
cl41463 pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...
597-832
1.60e-15
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
NF033839 :Pssm-ID: 468202 [Multi-domain]
Cd Length: 557
Bit Score: 82.51
E-value: 1.60e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 597 PE TPK KKSDPEL S -- K SE M KQ S - ESRLA E S KP N - E NRLV E T K SSEN K LETK V ET Q T E EL K QNESRTT E CKQN E sti V E P K 672
Cdd:NF033839 281 QD TPK EPGNKKP S ap K PG M QP S p QPEKK E V KP E p E TPKP E V K PQLE K PKPE V KP Q P E KP K PEVKPQL E TPKP E --- V K P Q 357
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 673 qnenr LSDT KP NDNK Q NNGRSETT K SR PETPK QKGESR PE T PK QKSDGH PE T PK QKGDGR PE T PK QKGESR PE T PK QKNE 752
Cdd:NF033839 358 ----- PEKP KP EVKP Q PEKPKPEV K PQ PETPK PEVKPQ PE K PK PEVKPQ PE K PK PEVKPQ PE K PK PEVKPQ PE K PK PEVK 432
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 753 GR PE T PK HRHDNRRDSG KP STEKK PE VS K HKQDTKSDS P R ------ LKSERAEAL K QRP D GR -- S VSES L RR D hdn KQ K S 824
Cdd:NF033839 433 PQ PE K PK PEVKPQPEKP KP EVKPQ PE TP K PEVKPQPEK P K pevkpq PEKPKPDNS K PQA D DK kp S TPNN L SK D --- KQ P S 509
....*...
gi 578809903 825 DDRGES E R 832
Cdd:NF033839 510 NQASTN E K 517
PTZ00121 super family
cl31754 MAEBL; Provisional
476-1098
1.85e-12
MAEBL; Provisional
PTZ00121 :Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 73.64
E-value: 1.85e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 476 E IERI E RESAIERERFSK E VQDK D KPL KK RKQDSYPQ EA GGATGGNRPASQETGSTGNGSRP A LMVSIDLHQ A GRVDSQ A 555
Cdd:PTZ00121 1282 E LKKA E EKKKADEAKKAE E KKKA D EAK KK AEEAKKAD EA KKKAEEAKKKADAAKKKAEEAKK A AEAAKAEAE A AADEAE A 1361
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 556 SITQ - DSDSI KK P E EI K QCND A PVSVLQEDIVGSL K STP E N hpet P KKK S D p EL S K SEMKQSESRL A ES K PN E NR lvet K 634
Cdd:PTZ00121 1362 AEEK a EAAEK KK E E AK K KADA A KKKAEEKKKADEA K KKA E E ---- D KKK A D - EL K K AAAAKKKADE A KK K AE E KK ---- K 1432
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 635 SS E N K LETKVETQTE E L K Q nes RTT E C K QN E S ti VEP K QN E NRLS D t KPNDNKQNNGRSETT K SRP E TP K Q K GES -- RPE 712
Cdd:PTZ00121 1433 AD E A K KKAEEAKKAD E A K K --- KAE E A K KA E E -- AKK K AE E AKKA D - EAKKKAEEAKKADEA K KKA E EA K K K ADE ak KAA 1506
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 713 TP K Q K S D ghp E TP K QK gdgrp E TP K QKGESRP E TP K QKN E GRPETP K HRH D NRRDS --- G K PSTE KK P E VS K HKQDT K SD 789
Cdd:PTZ00121 1507 EA K K K A D --- E AK K AE ----- E AK K ADEAKKA E EA K KAD E AKKAEE K KKA D ELKKA eel K K AEEK KK A E EA K KAEED K NM 1578
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 790 SP R lkse R AE AL K QRPDG R SV ------------- S E SLRRDHDN K Q K SDD -- RG E S E RHRGD Q SR ------ VRRP E T L RS 848
Cdd:PTZ00121 1579 AL R ---- K AE EA K KAEEA R IE evmklyeeekkmk A E EAKKAEEA K I K AEE lk KA E E E KKKVE Q LK kkeaee KKKA E E L KK 1654
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 849 SSRN ------------- E HGI K SDSS K TDKLER K HRH E SGDSRE --------- RPSSG E Q K SRPDSPR v K QGDS NK SRSD 906
Cdd:PTZ00121 1655 AEEE nkikaaeeakkae E DKK K AEEA K KAEEDE K KAA E ALKKEA eeakkaeel KKKEA E E K KKAEELK - K AEEE NK IKAE 1733
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 907 KLGFKSPTS K ---- DD K RT E GN K S K VDTN K AHPDN KAE fpsyllgg RSGAL K NF VI PKIKRDK D gnvtq E TKK ME MKGEP 982
Cdd:PTZ00121 1734 EAKKEAEED K kkae EA K KD E EE K K K IAHL K KEEEK KAE -------- EIRKE K EA VI EEELDEE D ----- E KRR ME VDKKI 1800
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 983 KD KVEKIGLVEDLN K GAKP V VVLQ K LSL D DVQ K LIK D REDKSRSSLKPIK ------- N KPSKSNKGSI D QSVL K E L PPEL 1055
Cdd:PTZ00121 1801 KD IFDNFANIIEGG K EGNL V INDS K EME D SAI K EVA D SKNMQLEEADAFE khkfnkn N ENGEDGNKEA D FNKE K D L KEDD 1880
650 660 670 680
....*....|....*....|....*....|....*....|....*..
gi 578809903 1056 LA EIE STM plc E RV K MN K ---- R KRSTV N EKP K YAE I SS D E d N D S DE 1098
Cdd:PTZ00121 1881 EE EIE EAD --- E IE K ID K ddie R EIPNN N MAG K NND I ID D K - L D K DE 1923
Name
Accession
Description
Interval
E-value
SCC2
cd23958 Sister chromatid cohesion protein 2 and homologs; This family includes Sister chromatid ...
1197-2407
0e+00
Sister chromatid cohesion protein 2 and homologs; This family includes Sister chromatid cohesion protein 2 (Scc2) and its homolog (Scc2 homolog, also called Nipped-B-like protein or NIPBL). Scc2/NIPBL and Scc4 form a complex that is responsible for loading the cohesin protein onto sister chromatids during mitosis and meiosis. Cohesin is a ring-shaped protein complex that encircles the sister chromatids and helps to hold them together until they are ready to be separated during cell division. In addition to its role in chromosome segregation, cohesin also plays important roles in other cellular processes such as transcription, chromosome condensation, and DNA repair.
Pssm-ID: 467937 [Multi-domain]
Cd Length: 1197
Bit Score: 1438.63
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 1197 V KV L N ILE K NI Q DG SK L S t L LNHNNDTEE EERLW RDLIME R VTKS ADA C LT tin I M TSP NM PK AV Y I ED V IERV IQYT KF 1276
Cdd:cd23958 3 V RL L T ILE R NI R DG ES L D - L DLDESQEDD EERLW LLERID R ALEA ADA S LT --- I L TSP GL PK QL Y S ED L IERV VDFL KF 78
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 1277 H L Q NT L YP Q YDPVYR L D PHGGGL lss K A KRAK C S TH K QRVIVM L Y NK V C DIV S S L S ELL EI Q L LTD TT ILQ VSSMG I T PF 1356
Cdd:cd23958 79 Q L E NT I YP A YDPVYR S D SSAKAG --- K K KRAK A S SK K KKSVST L L NK L C ELL S L L A ELL SL Q S LTD SV ILQ LVYLA I S PF 155
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 1357 FVE ---- NV S ELQL C A I KL V T AV FSRY EKH RQ L I L EEI FT SLA R LP T SKR S LR N FRLN SSD mdgepm Y IQMVTAL V LQL I 1432
Cdd:cd23958 156 FVE navs NV D ELQL S A L KL L T SI FSRY PDQ RQ F I I EEI LS SLA K LP S SKR N LR Q FRLN DGK ------ S IQMVTAL L LQL V 229
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 1433 Q CV V H LP SS EK D S N ----- A E EDSNKKI D QDVVITN SYE T A M R T A QN FLS IF L K KC GS K -- QGEE DYRPLFENFVQDLL S 1505
Cdd:cd23958 230 Q SS V K LP NL EK E S S rdksl E E DSDELLE D EESALAK SYE S A V R I A SY FLS FL L Q KC TK K kk EKDT DYRPLFENFVQDLL T 309
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 1506 TV N K PEWPAAELLLSLLGRLLV HQ FSNK S T EMAL RV AS LD Y LG TV AARLRKDA VT skmdqgsierilkqvsggedei QQ L 1585
Cdd:cd23958 310 VL N L PEWPAAELLLSLLGRLLV SI FSNK K T DANA RV MA LD L LG LI AARLRKDA LA ---------------------- EE L 367
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 1586 QKALLDYL D EN TET DPSL VFS R K FY I AQW F RD TTL E T EKA M K sqkdeessegthh A K E I E T T GQIMHRA E N RKKFL rsii 1665
Cdd:cd23958 368 QKALLDYL A EN SSS DPSL ESA R G FY L AQW L RD LSN E L EKA E K ------------- A A E E E D T ILKLELS E L RKKFL ---- 430
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 1666 ktt P S QFSTLKMNSDTVDYD DA C L IV R Y LAS M RP FA QSFD IY L T Q I L RV L G E N A IAV RTKA M K C LS E VV AV DPSIL ARL D 1745
Cdd:cd23958 431 --- D S KILSKEEEASPLSRE DA K L LY R A LAS Q RP LS QSFD PI L K Q L L SS L D E P A VTL RTKA L K A LS L VV EA DPSIL GDP D 507
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 1746 M QR G V H GRL M D N S T SVREAAVEL L G RFVLC RP Q LAEQYY D M LI ERILDTG I SVRKRVIKILRDI CIEQ P T F PKITEM CV K 1825
Cdd:cd23958 508 V QR A V E GRL L D S S A SVREAAVEL V G KYISS RP D LAEQYY E M IA ERILDTG V SVRKRVIKILRDI YLRT P D F EIKVDI CV R 587
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 1826 MI RR V ND - EE G IK K L VNE TFQ K LWFTP T P HN ----- DKE AMTRKI L N I T DVVAACR d T G Y D WF EQLL QN LLKS E ED SSY K 1899
Cdd:cd23958 588 LL RR I ND e EE S IK D L ARK TFQ E LWFTP F P ES sspaq DKE SLAERV L L I V DVVAACR - K G L D LL EQLL KR LLKS K ED KED K 666
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 1900 P V K KAC T QLVD N LVE H IL KY EE SLAD S dnkgv NSGR LVAC IT TL F LF S K IR P - Q L M V K HA M T M QPYL TT KCST QN D FM V I 1978
Cdd:cd23958 667 S V R KAC K QLVD C LVE L IL EL EE DDDE S ----- SESD LVAC LS TL H LF A K AD P k L L L V E HA E T L QPYL KS KCST RE D QQ V L 741
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 1979 CN V AK IL EL V V PL ME HPSE T FL ATI EEDL M KL II K YGM TV V Q HCVS CL G AVVNK V T Q N FKFVWACFNRYYGAIS K L K S Q H 2058
Cdd:cd23958 742 RY V LR IL RS V L PL LS HPSE S FL EEL EEDL L KL LL K HSV TV L Q EAIA CL C AVVNK L T K N YERLRKALQSCLKLLR K Y K R Q A 821
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 2059 QE DP NNT sll TNK P A LLR S L FTV G A L C R HF DFD L E DFKGN ----- S K VNI K DK V LE LL MY FTK HS - DE E V QT KA IIG LGF 2132
Cdd:cd23958 822 NL DP SSL --- KED P K LLR L L YIL G L L A R YC DFD S E RDDFE kaplk T K ESV K EL V FD LL LF FTK PP i DE D V RK KA LQA LGF 898
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 2133 AF I Q HP S L MFEQ EV KN L YNN IL SD kn S S VN LK I QVL K NLQ TY LQ E E DT RM QQ AD RD WKK VA K Q ----- E D L KEMGD VS SG 2207
Cdd:cd23958 899 LC I A HP K L FLSP EV LK L LDE IL AS -- G S LK LK L QVL R NLQ EF LQ A E EK RM EA AD AE WKK NS K A advkv L D G KEMGD AD SG 976
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 2208 MS SSIMQ L YLK QV LE AFFHTQ S S VR HF AL N V IA L T L N QGL I HP V QCVP Y LIA MG TDP E PA M R NK A DQQ L V E IDK KY AGFI 2287
Cdd:cd23958 977 VA SSIMQ R YLK DI LE LCLSSD S Q VR LA AL K V LE L I L R QGL V HP I QCVP T LIA LE TDP N PA I R KL A LRL L K E LHE KY ESLV 1056
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 2288 HM K AVA G MKMSY Q V Q QAINT cl KDPV RGFR Q D ESSS AL CSH LYS MI RGNR QH RR A FL I SLL N LFD D ------ TAKT D VTM 2361
Cdd:cd23958 1057 ES K YLE G VRLAF Q Y Q KRLAG -- DTRG RGFR T D SPPT AL LGR LYS LL RGNR KS RR K FL K SLL K LFD F dlkkss DSPS D LDF 1134
1210 1220 1230 1240
....*....|....*....|....*....|....*....|....*..
gi 578809903 2362 LL YI A D NLA CF PYQTQ E EPLF IM H H ID IT LSV S GS N LLQ SF - K E S MV 2407
Cdd:cd23958 1135 LL FL A E NLA FL PYQTQ D EPLF VI H T ID RI LSV T GS S LLQ AI a K A S QA 1181
Nipped-B_C
pfam12830 Sister chromatid cohesion C-terminus; This domain lies towards the C-terminus of nipped-B or ...
2209-2390
1.18e-69
Sister chromatid cohesion C-terminus; This domain lies towards the C-terminus of nipped-B or sister chromatid cohesion proteins.
Pssm-ID: 463722
Cd Length: 180
Bit Score: 232.04
E-value: 1.18e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 2209 S S SIM Q L YLK QV LE AFFHTQSS VR HF AL N V I AL T L N QGL I HP VQ C V P Y LIA MG T D P E P AM R NK A DQQLV E IDK K YAGFIH 2288
Cdd:pfam12830 1 C S ALV Q R YLK HI LE ICLSSDDQ VR LL AL E V L AL I L R QGL V HP KE C I P T LIA LE T S P N P YI R KL A FELHK E LHE K HESLLE 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 2289 MKAVA G MKMSYQV Q QAINTC lkdpvrgf RQD E SSSALC S H LYS MI R G N RQH R RA FL I SL LN LF D D ------ TAKT D VTM L 2362
Cdd:pfam12830 81 SRYME G IRLAFEY Q RRVLSG -------- ATL E PPTSFL S L LYS LL R S N KKS R KK FL K SL VK LF F D ldlsse SSPS D LDF L 152
170 180
....*....|....*....|....*...
gi 578809903 2363 LYI A D NLA CF PYQTQ E E P LF IM HHID IT 2390
Cdd:pfam12830 153 RFL A E NLA FL PYQTQ D E V LF LI HHID RI 180
PspC_subgroup_2
NF033839 pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...
597-832
1.60e-15
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain]
Cd Length: 557
Bit Score: 82.51
E-value: 1.60e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 597 PE TPK KKSDPEL S -- K SE M KQ S - ESRLA E S KP N - E NRLV E T K SSEN K LETK V ET Q T E EL K QNESRTT E CKQN E sti V E P K 672
Cdd:NF033839 281 QD TPK EPGNKKP S ap K PG M QP S p QPEKK E V KP E p E TPKP E V K PQLE K PKPE V KP Q P E KP K PEVKPQL E TPKP E --- V K P Q 357
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 673 qnenr LSDT KP NDNK Q NNGRSETT K SR PETPK QKGESR PE T PK QKSDGH PE T PK QKGDGR PE T PK QKGESR PE T PK QKNE 752
Cdd:NF033839 358 ----- PEKP KP EVKP Q PEKPKPEV K PQ PETPK PEVKPQ PE K PK PEVKPQ PE K PK PEVKPQ PE K PK PEVKPQ PE K PK PEVK 432
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 753 GR PE T PK HRHDNRRDSG KP STEKK PE VS K HKQDTKSDS P R ------ LKSERAEAL K QRP D GR -- S VSES L RR D hdn KQ K S 824
Cdd:NF033839 433 PQ PE K PK PEVKPQPEKP KP EVKPQ PE TP K PEVKPQPEK P K pevkpq PEKPKPDNS K PQA D DK kp S TPNN L SK D --- KQ P S 509
....*...
gi 578809903 825 DDRGES E R 832
Cdd:NF033839 510 NQASTN E K 517
PspC_subgroup_2
NF033839 pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...
590-790
1.95e-13
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain]
Cd Length: 557
Bit Score: 75.96
E-value: 1.95e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 590 K STPENH PE T PK KKSD P E L SK s EMKQSESRLAES KP NENRLV E TKSS E N K LET kv ET QTE E L K - Q N E SRTT E C K QNEST i 668
Cdd:NF033839 329 K PEVKPQ PE K PK PEVK P Q L ET - PKPEVKPQPEKP KP EVKPQP E KPKP E V K PQP -- ET PKP E V K p Q P E KPKP E V K PQPEK - 404
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 669 vepkqnenrlsd T KP NDNK Q NNGRSETT K SR PE T PK QKGESR PE T PK QKSDGH PE T PK QKGDGR PETPK QKGESR PE T PK 748
Cdd:NF033839 405 ------------ P KP EVKP Q PEKPKPEV K PQ PE K PK PEVKPQ PE K PK PEVKPQ PE K PK PEVKPQ PETPK PEVKPQ PE K PK 472
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 578809903 749 QKNEGR PE T PK hr H DN RR --- D SG KPST EK kp EV SK H KQ DTKSD S 790
Cdd:NF033839 473 PEVKPQ PE K PK -- P DN SK pqa D DK KPST PN -- NL SK D KQ PSNQA S 513
PTZ00121
PTZ00121 MAEBL; Provisional
476-1098
1.85e-12
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 73.64
E-value: 1.85e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 476 E IERI E RESAIERERFSK E VQDK D KPL KK RKQDSYPQ EA GGATGGNRPASQETGSTGNGSRP A LMVSIDLHQ A GRVDSQ A 555
Cdd:PTZ00121 1282 E LKKA E EKKKADEAKKAE E KKKA D EAK KK AEEAKKAD EA KKKAEEAKKKADAAKKKAEEAKK A AEAAKAEAE A AADEAE A 1361
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 556 SITQ - DSDSI KK P E EI K QCND A PVSVLQEDIVGSL K STP E N hpet P KKK S D p EL S K SEMKQSESRL A ES K PN E NR lvet K 634
Cdd:PTZ00121 1362 AEEK a EAAEK KK E E AK K KADA A KKKAEEKKKADEA K KKA E E ---- D KKK A D - EL K K AAAAKKKADE A KK K AE E KK ---- K 1432
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 635 SS E N K LETKVETQTE E L K Q nes RTT E C K QN E S ti VEP K QN E NRLS D t KPNDNKQNNGRSETT K SRP E TP K Q K GES -- RPE 712
Cdd:PTZ00121 1433 AD E A K KKAEEAKKAD E A K K --- KAE E A K KA E E -- AKK K AE E AKKA D - EAKKKAEEAKKADEA K KKA E EA K K K ADE ak KAA 1506
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 713 TP K Q K S D ghp E TP K QK gdgrp E TP K QKGESRP E TP K QKN E GRPETP K HRH D NRRDS --- G K PSTE KK P E VS K HKQDT K SD 789
Cdd:PTZ00121 1507 EA K K K A D --- E AK K AE ----- E AK K ADEAKKA E EA K KAD E AKKAEE K KKA D ELKKA eel K K AEEK KK A E EA K KAEED K NM 1578
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 790 SP R lkse R AE AL K QRPDG R SV ------------- S E SLRRDHDN K Q K SDD -- RG E S E RHRGD Q SR ------ VRRP E T L RS 848
Cdd:PTZ00121 1579 AL R ---- K AE EA K KAEEA R IE evmklyeeekkmk A E EAKKAEEA K I K AEE lk KA E E E KKKVE Q LK kkeaee KKKA E E L KK 1654
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 849 SSRN ------------- E HGI K SDSS K TDKLER K HRH E SGDSRE --------- RPSSG E Q K SRPDSPR v K QGDS NK SRSD 906
Cdd:PTZ00121 1655 AEEE nkikaaeeakkae E DKK K AEEA K KAEEDE K KAA E ALKKEA eeakkaeel KKKEA E E K KKAEELK - K AEEE NK IKAE 1733
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 907 KLGFKSPTS K ---- DD K RT E GN K S K VDTN K AHPDN KAE fpsyllgg RSGAL K NF VI PKIKRDK D gnvtq E TKK ME MKGEP 982
Cdd:PTZ00121 1734 EAKKEAEED K kkae EA K KD E EE K K K IAHL K KEEEK KAE -------- EIRKE K EA VI EEELDEE D ----- E KRR ME VDKKI 1800
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 983 KD KVEKIGLVEDLN K GAKP V VVLQ K LSL D DVQ K LIK D REDKSRSSLKPIK ------- N KPSKSNKGSI D QSVL K E L PPEL 1055
Cdd:PTZ00121 1801 KD IFDNFANIIEGG K EGNL V INDS K EME D SAI K EVA D SKNMQLEEADAFE khkfnkn N ENGEDGNKEA D FNKE K D L KEDD 1880
650 660 670 680
....*....|....*....|....*....|....*....|....*..
gi 578809903 1056 LA EIE STM plc E RV K MN K ---- R KRSTV N EKP K YAE I SS D E d N D S DE 1098
Cdd:PTZ00121 1881 EE EIE EAD --- E IE K ID K ddie R EIPNN N MAG K NND I ID D K - L D K DE 1923
PspC_subgroup_2
NF033839 pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...
591-943
1.20e-10
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain]
Cd Length: 557
Bit Score: 67.10
E-value: 1.20e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 591 ST PEN ---- H P E TP KKKSD P ELSKSEM K Q S ESRLAES K PNENRL V E T KS S ENKLE - T K VET Q T E ELK Q NESRTT E CKQ -- 663
Cdd:NF033839 162 PQ PEN pehq K P T TP APDTK P SPQPEGK K P S VPDINQE K EKAKLA V A T YM S KILDD i Q K HHL Q K E KHR Q IVALIK E LDE lk 241
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 664 -------- N ES T I VE PKQNENRL - S D TKPNDN K QNN G RSET T ----- KSR P ET PK QKGESR P ETP K QKSDGH PETPK QKG 729
Cdd:NF033839 242 kqalseid N VN T K VE IENTVHKI f A D MDAVVT K FKK G LTQD T pkepg NKK P SA PK PGMQPS P QPE K KEVKPE PETPK PEV 321
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 730 DGRP E T PK QKGESR PE T PK QKNEGRP ETPK HRHDNRRDSG KP st E K KP EVS K H K QDT K SDSPRL K S E - RAEAL K QR P DGR 808
Cdd:NF033839 322 KPQL E K PK PEVKPQ PE K PK PEVKPQL ETPK PEVKPQPEKP KP -- E V KP QPE K P K PEV K PQPETP K P E v KPQPE K PK P EVK 399
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 809 SVS E slrrdhdn K Q K SDDRGES E RHRGD --- Q SRVRR PE TLRSSSRNEHGI K SD s SKTD K L E R K HRH E SGDSRER P SS ge 885
Cdd:NF033839 400 PQP E -------- K P K PEVKPQP E KPKPE vkp Q PEKPK PE VKPQPEKPKPEV K PQ - PEKP K P E V K PQP E TPKPEVK P QP -- 468
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 578809903 886 Q K SR P D --- S P RVKQG D SN K SRS D K lgf K S P TSKDDKRTEGNK S K -- VDTN KA HPDN K AEF PS 943
Cdd:NF033839 469 E K PK P E vkp Q P EKPKP D NS K PQA D D --- K K P STPNNLSKDKQP S N qa STNE KA TNKP K KSL PS 528
ftsN
TIGR02223 cell division protein FtsN; FtsN is a poorly conserved protein active in cell division in a ...
591-778
1.18e-07
cell division protein FtsN; FtsN is a poorly conserved protein active in cell division in a number of Proteobacteria. The N-terminal 30 residue region tends to by Lys/Arg-rich, and is followed by a membrane-spanning region. This is followed by an acidic low-complexity region of variable length and a well-conserved C-terminal domain of two tandem regions matched by pfam05036 (Sporulation related repeat), found in several cell division and sporulation proteins. The role of FtsN as a suppressor for other cell division mutations is poorly understood; it may involve cell wall hydrolysis. [Cellular processes, Cell division]
Pssm-ID: 274041 [Multi-domain]
Cd Length: 298
Bit Score: 56.24
E-value: 1.18e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 591 S TPE N H PET PKK K SDP E LSKSEMK --- QS E S R LAESKPN E N R L V ETKSS E NKLETKVETQTEE L KQNESRTT E ckqnest 667
Cdd:TIGR02223 51 S KQA N E PET LQP K NQT E NGETAAD lpp KP E E R WSYIEEL E A R E V LINDP E EPSNGGGVEESAQ L TAEQRQLL E ------- 123
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 668 ive PK Q NEN R LSDTKPNDNKQNNGRSETTKSRPETP K QKGESRP E TP K QK sdgh P ET P K QKGDGRPETP KQK GESRPETP 747
Cdd:TIGR02223 124 --- QM Q ADM R AAEKVLATAPSEQTVAVEARKQTAEK K PQKARTA E AQ K TP ---- V ET E K IASKVKEAKQ KQK ALPKQTAE 196
170 180 190
....*....|....*....|....*....|.
gi 578809903 748 K Q K N EGRP ET P kh RHDNRR D SG KP STEK K P E 778
Cdd:TIGR02223 197 T Q S N SKPI ET A -- PKADKA D KT KP KPKE K A E 225
PTZ00449
PTZ00449 104 kDa microneme/rhoptry antigen; Provisional
476-894
4.58e-07
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain]
Cd Length: 943
Bit Score: 55.85
E-value: 4.58e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 476 EI ERIERE S AIERERFSK E VQ DK - D K P LKKRKQDSY P QE A G G --- ATG G NRPA S Q E TGSTGN G SR P AL mvsidlhqagrv 551
Cdd:PTZ00449 484 EI KKLIKK S KKKLAPIEE E DS DK h D E P PEGPEASGL P PK A P G dke GEE G EHED S K E SDEPKE G GK P GE ------------ 551
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 552 dsqasi T QDSDSI KKP EEI K QCNDAPVSV L QEDIVGSLKSTPENH PE T PKK KSD P ELSKSEMKQSESR L A E SK -- P NENR 629
Cdd:PTZ00449 552 ------ T KEGEVG KKP GPA K EHKPSKIPT L SKKPEFPKDPKHPKD PE E PKK PKR P RSAQRPTRPKSPK L P E LL di P KSPK 625
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 630 LV E TKS S ENKLETKVETQTE E LKQNESRTTEC K QNE S TIV -- E PK QN E N ---------- RLSD TK PNDNKQNNGR S ETTK 697
Cdd:PTZ00449 626 RP E SPK S PKRPPPPQRPSSP E RPEGPKIIKSP K PPK S PKP pf D PK FK E K fyddyldaaa KSKE TK TTVVLDESFE S ILKE 705
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 698 SR PETP KQKGES - RP ET PK QKS D gh P E T P KQK g D G R P ETPKQKGESRPET P KQKNEGRP ETP KHRH ------------ D N 764
Cdd:PTZ00449 706 TL PETP GTPFTT p RP LP PK LPR D -- E E F P FEP - I G D P DAEQPDDIEFFTP P EEERTFFH ETP ADTP lpdilaeefkee D I 782
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 765 RRDS G K P - STE K K P EV - S K H KQDTKS D S P R L -- K SE R AEA L K - QRP D GR S VSESLRR D HDN K QKSDD R GE S erh RG D QSR 839
Cdd:PTZ00449 783 HAET G E P d EAM K R P DS p S E H EDKPPG D H P S L pk K RH R LDG L A l STT D LE S DAGRIAK D ASG K IVKLK R SK S --- FD D LTT 859
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 578809903 840 V RRP E TLRSSS R ---- NEH G IKS D SSK T DKL E R KH RH E SGDS R -- ER PS SGEQK S R P DS P R 894
Cdd:PTZ00449 860 V EEA E EMGAEA R kivv DDD G TEA D DED T HPP E E KH KS E VRRR R pp KK PS KPKKP S K P KK P K 920
Caldesmon
pfam02029 Caldesmon;
480-890
2.08e-04
Caldesmon;
Pssm-ID: 460421 [Multi-domain]
Cd Length: 495
Bit Score: 46.78
E-value: 2.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 480 IE R E SAIE RER FSKEVQDK dkplkk R K Q DSYPQEA G GA T GGNR P ASQETGSTGNGSR P ALMVSI D LHQ A G rvdsqasitq 559
Cdd:pfam02029 1 IE D E EEAA RER RRRAREER ------ R R Q KEEEEPS G QV T ESVE P NEHNSYEEDSELK P SGQGGL D EEE A F ---------- 64
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 560 d S D SIK K P EE IK Q CNDAPVSVL Q EDIVGSLKSTP E NHP E TPKKKSDP E L S KS E MK - QSE SRL AES K PN E NRLV E TKSS EN 638
Cdd:pfam02029 65 - L D RTA K R EE RR Q KRLQEALER Q KEFDPTIADEK E SVA E RKENNEEE E N S SW E KE e KRD SRL GRY K EE E TEIR E KEYQ EN 143
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 639 K LE T -------------- K V E TQT E ELKQ N ESRTTECKQNESTIVEP K QNENRLS D T K PN dnkqnngrsettksrpe T P K 704
Cdd:pfam02029 144 K WS T evrqaeeegeeeed K S E EAE E VPTE N FAKEEVKDEKIKKEKKV K YESKVFL D Q K RG ----------------- H P E 206
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 705 Q K GESRP E tp KQKSDGHPETPK Q K G DGRPETPKQKG E SRP E TPKQKN E G R petpkhrhdn RR DSG K P S T E KKP ev SKH KQ 784
Cdd:pfam02029 207 V K SQNGE E -- EVTKLKVTTKRR Q G G LSQSQEREEEA E VFL E AEQKLE E L R ---------- RR RQE K E S E E FEK -- LRQ KQ 272
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 785 dtksds PRLKS E RA E AL K Q R PDG R SV - S E SLR R DHDNKQKSDD R G E S E RH R GDQSRV RR ----------- PE T lr SSS RN 852
Cdd:pfam02029 273 ------ QEAEL E LE E LK K K R EER R KL l E E EEQ R RKQEEAERKL R E E E E KR R MKEEIE RR raeaaekrqkl PE D -- SSS EG 344
410 420 430
....*....|....*....|....*....|....*...
gi 578809903 853 EHGI K SD S S K TDK L ERKH R H E SGDSRERP SS GEQ K SR P 890
Cdd:pfam02029 345 KKPF K CF S P K GSS L KITE R A E FLNKSLQK SS SVK K TH P 382
PspC_subgroup_1
NF033838 pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ...
475-759
1.42e-03
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain]
Cd Length: 684
Bit Score: 44.23
E-value: 1.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 475 AE I E RIE R ES A IER E RFS K E V -- QDK DKP l K K R KQDSYPQ E AGGATGGNRP A SQETG S T G NGSR P A lmvsidlhqagrv D 552
Cdd:NF033838 233 AE E E AKR R AD A KLK E AVE K N V at SEQ DKP - K R R AKRGVLG E PATPDKKEND A KSSDS S V G EETL P S ------------- P 298
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 553 S QASITQDSDSI KK P EE I - K QCN D apvsvl Q ED ivgslk STPE N H P ETPK K KSDP E LSK S EM K QS E SR L aeskpnen R LV 631
Cdd:NF033838 299 S LKPEKKVAEAE KK V EE A k K KAK D ------ Q KE ------ EDRR N Y P TNTY K TLEL E IAE S DV K VK E AE L -------- E LV 358
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 632 ETKSS E NKL E T K VETQTEEL kqnesrtt E C K QN E S T IV E PKQNENR lsd TKPNDN K QNNGRSETT K SR P - E T P KQKGESR 710
Cdd:NF033838 359 KEEAK E PRN E E K IKQAKAKV -------- E S K KA E A T RL E KIKTDRK --- KAEEEA K RKAAEEDKV K EK P a E Q P QPAPAPQ 427
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 711 PE T P KQ K SDGHP E T PK - Q K GDGR ---------- P E TPKQKGESR P et PK QKNEGR P E TPK 759
Cdd:NF033838 428 PE K P AP K PEKPA E Q PK a E K PADQ qaeedyarrs E E EYNRLTQQQ P -- PK TEKPAQ P S TPK 485
Name
Accession
Description
Interval
E-value
SCC2
cd23958 Sister chromatid cohesion protein 2 and homologs; This family includes Sister chromatid ...
1197-2407
0e+00
Sister chromatid cohesion protein 2 and homologs; This family includes Sister chromatid cohesion protein 2 (Scc2) and its homolog (Scc2 homolog, also called Nipped-B-like protein or NIPBL). Scc2/NIPBL and Scc4 form a complex that is responsible for loading the cohesin protein onto sister chromatids during mitosis and meiosis. Cohesin is a ring-shaped protein complex that encircles the sister chromatids and helps to hold them together until they are ready to be separated during cell division. In addition to its role in chromosome segregation, cohesin also plays important roles in other cellular processes such as transcription, chromosome condensation, and DNA repair.
Pssm-ID: 467937 [Multi-domain]
Cd Length: 1197
Bit Score: 1438.63
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 1197 V KV L N ILE K NI Q DG SK L S t L LNHNNDTEE EERLW RDLIME R VTKS ADA C LT tin I M TSP NM PK AV Y I ED V IERV IQYT KF 1276
Cdd:cd23958 3 V RL L T ILE R NI R DG ES L D - L DLDESQEDD EERLW LLERID R ALEA ADA S LT --- I L TSP GL PK QL Y S ED L IERV VDFL KF 78
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 1277 H L Q NT L YP Q YDPVYR L D PHGGGL lss K A KRAK C S TH K QRVIVM L Y NK V C DIV S S L S ELL EI Q L LTD TT ILQ VSSMG I T PF 1356
Cdd:cd23958 79 Q L E NT I YP A YDPVYR S D SSAKAG --- K K KRAK A S SK K KKSVST L L NK L C ELL S L L A ELL SL Q S LTD SV ILQ LVYLA I S PF 155
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 1357 FVE ---- NV S ELQL C A I KL V T AV FSRY EKH RQ L I L EEI FT SLA R LP T SKR S LR N FRLN SSD mdgepm Y IQMVTAL V LQL I 1432
Cdd:cd23958 156 FVE navs NV D ELQL S A L KL L T SI FSRY PDQ RQ F I I EEI LS SLA K LP S SKR N LR Q FRLN DGK ------ S IQMVTAL L LQL V 229
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 1433 Q CV V H LP SS EK D S N ----- A E EDSNKKI D QDVVITN SYE T A M R T A QN FLS IF L K KC GS K -- QGEE DYRPLFENFVQDLL S 1505
Cdd:cd23958 230 Q SS V K LP NL EK E S S rdksl E E DSDELLE D EESALAK SYE S A V R I A SY FLS FL L Q KC TK K kk EKDT DYRPLFENFVQDLL T 309
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 1506 TV N K PEWPAAELLLSLLGRLLV HQ FSNK S T EMAL RV AS LD Y LG TV AARLRKDA VT skmdqgsierilkqvsggedei QQ L 1585
Cdd:cd23958 310 VL N L PEWPAAELLLSLLGRLLV SI FSNK K T DANA RV MA LD L LG LI AARLRKDA LA ---------------------- EE L 367
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 1586 QKALLDYL D EN TET DPSL VFS R K FY I AQW F RD TTL E T EKA M K sqkdeessegthh A K E I E T T GQIMHRA E N RKKFL rsii 1665
Cdd:cd23958 368 QKALLDYL A EN SSS DPSL ESA R G FY L AQW L RD LSN E L EKA E K ------------- A A E E E D T ILKLELS E L RKKFL ---- 430
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 1666 ktt P S QFSTLKMNSDTVDYD DA C L IV R Y LAS M RP FA QSFD IY L T Q I L RV L G E N A IAV RTKA M K C LS E VV AV DPSIL ARL D 1745
Cdd:cd23958 431 --- D S KILSKEEEASPLSRE DA K L LY R A LAS Q RP LS QSFD PI L K Q L L SS L D E P A VTL RTKA L K A LS L VV EA DPSIL GDP D 507
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 1746 M QR G V H GRL M D N S T SVREAAVEL L G RFVLC RP Q LAEQYY D M LI ERILDTG I SVRKRVIKILRDI CIEQ P T F PKITEM CV K 1825
Cdd:cd23958 508 V QR A V E GRL L D S S A SVREAAVEL V G KYISS RP D LAEQYY E M IA ERILDTG V SVRKRVIKILRDI YLRT P D F EIKVDI CV R 587
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 1826 MI RR V ND - EE G IK K L VNE TFQ K LWFTP T P HN ----- DKE AMTRKI L N I T DVVAACR d T G Y D WF EQLL QN LLKS E ED SSY K 1899
Cdd:cd23958 588 LL RR I ND e EE S IK D L ARK TFQ E LWFTP F P ES sspaq DKE SLAERV L L I V DVVAACR - K G L D LL EQLL KR LLKS K ED KED K 666
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 1900 P V K KAC T QLVD N LVE H IL KY EE SLAD S dnkgv NSGR LVAC IT TL F LF S K IR P - Q L M V K HA M T M QPYL TT KCST QN D FM V I 1978
Cdd:cd23958 667 S V R KAC K QLVD C LVE L IL EL EE DDDE S ----- SESD LVAC LS TL H LF A K AD P k L L L V E HA E T L QPYL KS KCST RE D QQ V L 741
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 1979 CN V AK IL EL V V PL ME HPSE T FL ATI EEDL M KL II K YGM TV V Q HCVS CL G AVVNK V T Q N FKFVWACFNRYYGAIS K L K S Q H 2058
Cdd:cd23958 742 RY V LR IL RS V L PL LS HPSE S FL EEL EEDL L KL LL K HSV TV L Q EAIA CL C AVVNK L T K N YERLRKALQSCLKLLR K Y K R Q A 821
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 2059 QE DP NNT sll TNK P A LLR S L FTV G A L C R HF DFD L E DFKGN ----- S K VNI K DK V LE LL MY FTK HS - DE E V QT KA IIG LGF 2132
Cdd:cd23958 822 NL DP SSL --- KED P K LLR L L YIL G L L A R YC DFD S E RDDFE kaplk T K ESV K EL V FD LL LF FTK PP i DE D V RK KA LQA LGF 898
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 2133 AF I Q HP S L MFEQ EV KN L YNN IL SD kn S S VN LK I QVL K NLQ TY LQ E E DT RM QQ AD RD WKK VA K Q ----- E D L KEMGD VS SG 2207
Cdd:cd23958 899 LC I A HP K L FLSP EV LK L LDE IL AS -- G S LK LK L QVL R NLQ EF LQ A E EK RM EA AD AE WKK NS K A advkv L D G KEMGD AD SG 976
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 2208 MS SSIMQ L YLK QV LE AFFHTQ S S VR HF AL N V IA L T L N QGL I HP V QCVP Y LIA MG TDP E PA M R NK A DQQ L V E IDK KY AGFI 2287
Cdd:cd23958 977 VA SSIMQ R YLK DI LE LCLSSD S Q VR LA AL K V LE L I L R QGL V HP I QCVP T LIA LE TDP N PA I R KL A LRL L K E LHE KY ESLV 1056
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 2288 HM K AVA G MKMSY Q V Q QAINT cl KDPV RGFR Q D ESSS AL CSH LYS MI RGNR QH RR A FL I SLL N LFD D ------ TAKT D VTM 2361
Cdd:cd23958 1057 ES K YLE G VRLAF Q Y Q KRLAG -- DTRG RGFR T D SPPT AL LGR LYS LL RGNR KS RR K FL K SLL K LFD F dlkkss DSPS D LDF 1134
1210 1220 1230 1240
....*....|....*....|....*....|....*....|....*..
gi 578809903 2362 LL YI A D NLA CF PYQTQ E EPLF IM H H ID IT LSV S GS N LLQ SF - K E S MV 2407
Cdd:cd23958 1135 LL FL A E NLA FL PYQTQ D EPLF VI H T ID RI LSV T GS S LLQ AI a K A S QA 1181
Nipped-B_C
pfam12830 Sister chromatid cohesion C-terminus; This domain lies towards the C-terminus of nipped-B or ...
2209-2390
1.18e-69
Sister chromatid cohesion C-terminus; This domain lies towards the C-terminus of nipped-B or sister chromatid cohesion proteins.
Pssm-ID: 463722
Cd Length: 180
Bit Score: 232.04
E-value: 1.18e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 2209 S S SIM Q L YLK QV LE AFFHTQSS VR HF AL N V I AL T L N QGL I HP VQ C V P Y LIA MG T D P E P AM R NK A DQQLV E IDK K YAGFIH 2288
Cdd:pfam12830 1 C S ALV Q R YLK HI LE ICLSSDDQ VR LL AL E V L AL I L R QGL V HP KE C I P T LIA LE T S P N P YI R KL A FELHK E LHE K HESLLE 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 2289 MKAVA G MKMSYQV Q QAINTC lkdpvrgf RQD E SSSALC S H LYS MI R G N RQH R RA FL I SL LN LF D D ------ TAKT D VTM L 2362
Cdd:pfam12830 81 SRYME G IRLAFEY Q RRVLSG -------- ATL E PPTSFL S L LYS LL R S N KKS R KK FL K SL VK LF F D ldlsse SSPS D LDF L 152
170 180
....*....|....*....|....*...
gi 578809903 2363 LYI A D NLA CF PYQTQ E E P LF IM HHID IT 2390
Cdd:pfam12830 153 RFL A E NLA FL PYQTQ D E V LF LI HHID RI 180
PspC_subgroup_2
NF033839 pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...
597-832
1.60e-15
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain]
Cd Length: 557
Bit Score: 82.51
E-value: 1.60e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 597 PE TPK KKSDPEL S -- K SE M KQ S - ESRLA E S KP N - E NRLV E T K SSEN K LETK V ET Q T E EL K QNESRTT E CKQN E sti V E P K 672
Cdd:NF033839 281 QD TPK EPGNKKP S ap K PG M QP S p QPEKK E V KP E p E TPKP E V K PQLE K PKPE V KP Q P E KP K PEVKPQL E TPKP E --- V K P Q 357
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 673 qnenr LSDT KP NDNK Q NNGRSETT K SR PETPK QKGESR PE T PK QKSDGH PE T PK QKGDGR PE T PK QKGESR PE T PK QKNE 752
Cdd:NF033839 358 ----- PEKP KP EVKP Q PEKPKPEV K PQ PETPK PEVKPQ PE K PK PEVKPQ PE K PK PEVKPQ PE K PK PEVKPQ PE K PK PEVK 432
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 753 GR PE T PK HRHDNRRDSG KP STEKK PE VS K HKQDTKSDS P R ------ LKSERAEAL K QRP D GR -- S VSES L RR D hdn KQ K S 824
Cdd:NF033839 433 PQ PE K PK PEVKPQPEKP KP EVKPQ PE TP K PEVKPQPEK P K pevkpq PEKPKPDNS K PQA D DK kp S TPNN L SK D --- KQ P S 509
....*...
gi 578809903 825 DDRGES E R 832
Cdd:NF033839 510 NQASTN E K 517
PspC_subgroup_2
NF033839 pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...
590-790
1.95e-13
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain]
Cd Length: 557
Bit Score: 75.96
E-value: 1.95e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 590 K STPENH PE T PK KKSD P E L SK s EMKQSESRLAES KP NENRLV E TKSS E N K LET kv ET QTE E L K - Q N E SRTT E C K QNEST i 668
Cdd:NF033839 329 K PEVKPQ PE K PK PEVK P Q L ET - PKPEVKPQPEKP KP EVKPQP E KPKP E V K PQP -- ET PKP E V K p Q P E KPKP E V K PQPEK - 404
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 669 vepkqnenrlsd T KP NDNK Q NNGRSETT K SR PE T PK QKGESR PE T PK QKSDGH PE T PK QKGDGR PETPK QKGESR PE T PK 748
Cdd:NF033839 405 ------------ P KP EVKP Q PEKPKPEV K PQ PE K PK PEVKPQ PE K PK PEVKPQ PE K PK PEVKPQ PETPK PEVKPQ PE K PK 472
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 578809903 749 QKNEGR PE T PK hr H DN RR --- D SG KPST EK kp EV SK H KQ DTKSD S 790
Cdd:NF033839 473 PEVKPQ PE K PK -- P DN SK pqa D DK KPST PN -- NL SK D KQ PSNQA S 513
PTZ00121
PTZ00121 MAEBL; Provisional
476-1098
1.85e-12
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 73.64
E-value: 1.85e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 476 E IERI E RESAIERERFSK E VQDK D KPL KK RKQDSYPQ EA GGATGGNRPASQETGSTGNGSRP A LMVSIDLHQ A GRVDSQ A 555
Cdd:PTZ00121 1282 E LKKA E EKKKADEAKKAE E KKKA D EAK KK AEEAKKAD EA KKKAEEAKKKADAAKKKAEEAKK A AEAAKAEAE A AADEAE A 1361
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 556 SITQ - DSDSI KK P E EI K QCND A PVSVLQEDIVGSL K STP E N hpet P KKK S D p EL S K SEMKQSESRL A ES K PN E NR lvet K 634
Cdd:PTZ00121 1362 AEEK a EAAEK KK E E AK K KADA A KKKAEEKKKADEA K KKA E E ---- D KKK A D - EL K K AAAAKKKADE A KK K AE E KK ---- K 1432
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 635 SS E N K LETKVETQTE E L K Q nes RTT E C K QN E S ti VEP K QN E NRLS D t KPNDNKQNNGRSETT K SRP E TP K Q K GES -- RPE 712
Cdd:PTZ00121 1433 AD E A K KKAEEAKKAD E A K K --- KAE E A K KA E E -- AKK K AE E AKKA D - EAKKKAEEAKKADEA K KKA E EA K K K ADE ak KAA 1506
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 713 TP K Q K S D ghp E TP K QK gdgrp E TP K QKGESRP E TP K QKN E GRPETP K HRH D NRRDS --- G K PSTE KK P E VS K HKQDT K SD 789
Cdd:PTZ00121 1507 EA K K K A D --- E AK K AE ----- E AK K ADEAKKA E EA K KAD E AKKAEE K KKA D ELKKA eel K K AEEK KK A E EA K KAEED K NM 1578
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 790 SP R lkse R AE AL K QRPDG R SV ------------- S E SLRRDHDN K Q K SDD -- RG E S E RHRGD Q SR ------ VRRP E T L RS 848
Cdd:PTZ00121 1579 AL R ---- K AE EA K KAEEA R IE evmklyeeekkmk A E EAKKAEEA K I K AEE lk KA E E E KKKVE Q LK kkeaee KKKA E E L KK 1654
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 849 SSRN ------------- E HGI K SDSS K TDKLER K HRH E SGDSRE --------- RPSSG E Q K SRPDSPR v K QGDS NK SRSD 906
Cdd:PTZ00121 1655 AEEE nkikaaeeakkae E DKK K AEEA K KAEEDE K KAA E ALKKEA eeakkaeel KKKEA E E K KKAEELK - K AEEE NK IKAE 1733
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 907 KLGFKSPTS K ---- DD K RT E GN K S K VDTN K AHPDN KAE fpsyllgg RSGAL K NF VI PKIKRDK D gnvtq E TKK ME MKGEP 982
Cdd:PTZ00121 1734 EAKKEAEED K kkae EA K KD E EE K K K IAHL K KEEEK KAE -------- EIRKE K EA VI EEELDEE D ----- E KRR ME VDKKI 1800
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 983 KD KVEKIGLVEDLN K GAKP V VVLQ K LSL D DVQ K LIK D REDKSRSSLKPIK ------- N KPSKSNKGSI D QSVL K E L PPEL 1055
Cdd:PTZ00121 1801 KD IFDNFANIIEGG K EGNL V INDS K EME D SAI K EVA D SKNMQLEEADAFE khkfnkn N ENGEDGNKEA D FNKE K D L KEDD 1880
650 660 670 680
....*....|....*....|....*....|....*....|....*..
gi 578809903 1056 LA EIE STM plc E RV K MN K ---- R KRSTV N EKP K YAE I SS D E d N D S DE 1098
Cdd:PTZ00121 1881 EE EIE EAD --- E IE K ID K ddie R EIPNN N MAG K NND I ID D K - L D K DE 1923
PTZ00121
PTZ00121 MAEBL; Provisional
470-1126
7.52e-12
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 71.71
E-value: 7.52e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 470 E LDAL AE IERIERESAI E RE R FSK E VQD K DKPLK K RKQDSYPQE A GG A TGGNRPASQETGSTGNGSRP A LMVSID -- LHQ 547
Cdd:PTZ00121 1095 E AFGK AE EAKKTETGKA E EA R KAE E AKK K AEDAR K AEEARKAED A RK A EEARKAEDAKRVEIARKAED A RKAEEA rk AED 1174
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 548 A GRVDS -- Q A SITQDSDSIK K P E EIKQCND A PVSVLQEDIVGSL K STPENHP E TP KK KSDPELSKS E M K QS E --- SRLAE 622
Cdd:PTZ00121 1175 A KKAEA ar K A EEVRKAEELR K A E DARKAEA A RKAEEERKAEEAR K AEDAKKA E AV KK AEEAKKDAE E A K KA E eer NNEEI 1254
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 623 S K PN E N R LVETKSSENKLETKVETQTE ELK QN E S -- RTT E C K QN E STI ---- VEP K QN E NRLS D TKPNDNKQNNGRSETT 696
Cdd:PTZ00121 1255 R K FE E A R MAHFARRQAAIKAEEARKAD ELK KA E E kk KAD E A K KA E EKK kade AKK K AE E AKKA D EAKKKAEEAKKKADAA 1334
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 697 K SRP E TP K QKG E SRPETPKQKS D GHPETPKQKGDGRPETPKQ K ge SRPETP K Q K N E GRPETPKHRHDNRR D SG K PSTE KK 776
Cdd:PTZ00121 1335 K KKA E EA K KAA E AAKAEAEAAA D EAEAAEEKAEAAEKKKEEA K -- KKADAA K K K A E EKKKADEAKKKAEE D KK K ADEL KK 1412
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 777 PEVS K hkqd T K S D SPRL K S E --- R A EAL K QRPDGRSVSESLRRDHDNKQ K SDD -- RGES E RHRG D QSRVRRP E TLRS ssr 851
Cdd:PTZ00121 1413 AAAA K ---- K K A D EAKK K A E ekk K A DEA K KKAEEAKKADEAKKKAEEAK K AEE ak KKAE E AKKA D EAKKKAE E AKKA --- 1485
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 852 N E HGI K SDSS K TDKL E R K HRH E SGDSRERPSSG E QKSRP D SPR v K QGDSN K SRSD K LGFKSPTSKDD K RT E GN K SKVDTN 931
Cdd:PTZ00121 1486 D E AKK K AEEA K KKAD E A K KAA E AKKKADEAKKA E EAKKA D EAK - K AEEAK K ADEA K KAEEKKKADEL K KA E EL K KAEEKK 1564
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 932 KA HPDN KAE FPSYLLGGRSGAL K N fv IPKIKRDKDGNVTQ E T KKM EMKGEP K DKVE KI G l V E D L N K GA --- K P V VV L Q K L 1008
Cdd:PTZ00121 1565 KA EEAK KAE EDKNMALRKAEEA K K -- AEEARIEEVMKLYE E E KKM KAEEAK K AEEA KI K - A E E L K K AE eek K K V EQ L K K K 1641
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 1009 SLDDVQ K LIKDREDKSRSSL K PIKNKPSKSNKGSIDQSVL K ELPP E LL A EIESTMPLC E RV K MNKR K RSTVN EK P K YA E I 1088
Cdd:PTZ00121 1642 EAEEKK K AEELKKAEEENKI K AAEEAKKAEEDKKKAEEAK K AEED E KK A AEALKKEAE E AK K AEEL K KKEAE EK K K AE E L 1721
650 660 670
....*....|....*....|....*....|....*...
gi 578809903 1089 SSD E DNDSDE A F E FARKMKK kekq K K R KA Y E P K LTP EE 1126
Cdd:PTZ00121 1722 KKA E EENKIK A E E AKKEAEE ---- D K K KA E E A K KDE EE 1755
PspC_subgroup_2
NF033839 pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...
591-943
1.20e-10
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain]
Cd Length: 557
Bit Score: 67.10
E-value: 1.20e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 591 ST PEN ---- H P E TP KKKSD P ELSKSEM K Q S ESRLAES K PNENRL V E T KS S ENKLE - T K VET Q T E ELK Q NESRTT E CKQ -- 663
Cdd:NF033839 162 PQ PEN pehq K P T TP APDTK P SPQPEGK K P S VPDINQE K EKAKLA V A T YM S KILDD i Q K HHL Q K E KHR Q IVALIK E LDE lk 241
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 664 -------- N ES T I VE PKQNENRL - S D TKPNDN K QNN G RSET T ----- KSR P ET PK QKGESR P ETP K QKSDGH PETPK QKG 729
Cdd:NF033839 242 kqalseid N VN T K VE IENTVHKI f A D MDAVVT K FKK G LTQD T pkepg NKK P SA PK PGMQPS P QPE K KEVKPE PETPK PEV 321
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 730 DGRP E T PK QKGESR PE T PK QKNEGRP ETPK HRHDNRRDSG KP st E K KP EVS K H K QDT K SDSPRL K S E - RAEAL K QR P DGR 808
Cdd:NF033839 322 KPQL E K PK PEVKPQ PE K PK PEVKPQL ETPK PEVKPQPEKP KP -- E V KP QPE K P K PEV K PQPETP K P E v KPQPE K PK P EVK 399
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 809 SVS E slrrdhdn K Q K SDDRGES E RHRGD --- Q SRVRR PE TLRSSSRNEHGI K SD s SKTD K L E R K HRH E SGDSRER P SS ge 885
Cdd:NF033839 400 PQP E -------- K P K PEVKPQP E KPKPE vkp Q PEKPK PE VKPQPEKPKPEV K PQ - PEKP K P E V K PQP E TPKPEVK P QP -- 468
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 578809903 886 Q K SR P D --- S P RVKQG D SN K SRS D K lgf K S P TSKDDKRTEGNK S K -- VDTN KA HPDN K AEF PS 943
Cdd:NF033839 469 E K PK P E vkp Q P EKPKP D NS K PQA D D --- K K P STPNNLSKDKQP S N qa STNE KA TNKP K KSL PS 528
PTZ00121
PTZ00121 MAEBL; Provisional
607-1227
5.74e-10
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 65.55
E-value: 5.74e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 607 EL S K S E -- M K QSES R L AE skp N E NRLV E TKSS E NKLETKVETQT EE L K QN -- E SRTT E CKQ N EST I VEPKQNENRLSDTK 682
Cdd:PTZ00121 1192 EL R K A E da R K AEAA R K AE --- E E RKAE E ARKA E DAKKAEAVKKA EE A K KD ae E AKKA E EER N NEE I RKFEEARMAHFARR 1268
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 683 PNDN K QNNG R SETTKSRP E TP K QKG E SRPETP K Q K S D ghp E TP K QKGDGR - PETP K Q K G E S --- RPETP K Q K N E --- GRP 755
Cdd:PTZ00121 1269 QAAI K AEEA R KADELKKA E EK K KAD E AKKAEE K K K A D --- E AK K KAEEAK k ADEA K K K A E E akk KADAA K K K A E eak KAA 1345
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 756 E TP K HRHDNRR D SGKPST EK KPEVS K H K QDT K SDSPRL K SERA E AL K QRPDGRSVS E SLRRDHDN K QKSDDRGESERHRG 835
Cdd:PTZ00121 1346 E AA K AEAEAAA D EAEAAE EK AEAAE K K K EEA K KKADAA K KKAE E KK K ADEAKKKAE E DKKKADEL K KAAAAKKKADEAKK 1425
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 836 DQSRVRRPETLRSSS rn E HGI K S D SS K T d K L E RKHRH E SGDSRERPSSGEQKSRPDSPRV K QG D SN K SRSDKLGF K SPTS 915
Cdd:PTZ00121 1426 KAEEKKKADEAKKKA -- E EAK K A D EA K K - K A E EAKKA E EAKKKAEEAKKADEAKKKAEEA K KA D EA K KKAEEAKK K ADEA 1502
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 916 K dd K RT E GN K SKVDTN KA HPDN KA EFPSYLLGGRSGA lknfvip KI K RDKDGNVTQ E T KK M E -- M K G E P K D K V E - KIGLV 992
Cdd:PTZ00121 1503 K -- K AA E AK K KADEAK KA EEAK KA DEAKKAEEAKKAD ------- EA K KAEEKKKAD E L KK A E el K K A E E K K K A E e AKKAE 1573
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 993 ED L N KGAKPVVVLQ K LSLDDVQKLI K DR E DKSRSSLKPI K N ----------- K PSKSN K GSID Q SVL KE LPPELL AE IES 1061
Cdd:PTZ00121 1574 ED K N MALRKAEEAK K AEEARIEEVM K LY E EEKKMKAEEA K K aeeakikaeel K KAEEE K KKVE Q LKK KE AEEKKK AE ELK 1653
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 1062 TMPLCERV K MNKRKRSTVNE K P K YA E ISSD E DND -- SD EA FEFARKMK KK EKQK K R K AY E P K LTP EE MMDSSTFKRFT A s 1139
Cdd:PTZ00121 1654 KAEEENKI K AAEEAKKAEED K K K AE E AKKA E EDE kk AA EA LKKEAEEA KK AEEL K K K EA E E K KKA EE LKKAEEENKIK A - 1732
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 1140 i E NILDNL E DMDFT A ------ FGDDDE I PQELLLGKHQLN E LGS E SAKIKAMGIMDK ----- LST DK TV K VLNILEK NI Q 1208
Cdd:PTZ00121 1733 - E EAKKEA E EDKKK A eeakkd EEEKKK I AHLKKEEEKKAE E IRK E KEAVIEEELDEE dekrr MEV DK KI K DIFDNFA NI I 1811
650 660
....*....|....*....|
gi 578809903 1209 D G S K LST L - L N HNNDT E EEE 1227
Cdd:PTZ00121 1812 E G G K EGN L v I N DSKEM E DSA 1831
Cohesin_HEAT
pfam12765 HEAT repeat associated with sister chromatid cohesion; This HEAT repeat is found most ...
1728-1769
2.93e-09
HEAT repeat associated with sister chromatid cohesion; This HEAT repeat is found most frequently in sister chromatid cohesion proteins such as Nipped-B. HEAT repeats are found tandemly repeated in many proteins, and they appear to serve as flexible scaffolding on which other components can assemble.
Pssm-ID: 403845 [Multi-domain]
Cd Length: 42
Bit Score: 54.39
E-value: 2.93e-09
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 578809903 1728 K C LS EV V AV DPSIL ARL D MQRGVHG RL M D N S T SVR E AA V ELL 1769
Cdd:pfam12765 1 K A LS SL V EK DPSIL DSP D VKEAISR RL T D S S P SVR D AA L ELL 42
ftsN
TIGR02223 cell division protein FtsN; FtsN is a poorly conserved protein active in cell division in a ...
591-778
1.18e-07
cell division protein FtsN; FtsN is a poorly conserved protein active in cell division in a number of Proteobacteria. The N-terminal 30 residue region tends to by Lys/Arg-rich, and is followed by a membrane-spanning region. This is followed by an acidic low-complexity region of variable length and a well-conserved C-terminal domain of two tandem regions matched by pfam05036 (Sporulation related repeat), found in several cell division and sporulation proteins. The role of FtsN as a suppressor for other cell division mutations is poorly understood; it may involve cell wall hydrolysis. [Cellular processes, Cell division]
Pssm-ID: 274041 [Multi-domain]
Cd Length: 298
Bit Score: 56.24
E-value: 1.18e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 591 S TPE N H PET PKK K SDP E LSKSEMK --- QS E S R LAESKPN E N R L V ETKSS E NKLETKVETQTEE L KQNESRTT E ckqnest 667
Cdd:TIGR02223 51 S KQA N E PET LQP K NQT E NGETAAD lpp KP E E R WSYIEEL E A R E V LINDP E EPSNGGGVEESAQ L TAEQRQLL E ------- 123
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 668 ive PK Q NEN R LSDTKPNDNKQNNGRSETTKSRPETP K QKGESRP E TP K QK sdgh P ET P K QKGDGRPETP KQK GESRPETP 747
Cdd:TIGR02223 124 --- QM Q ADM R AAEKVLATAPSEQTVAVEARKQTAEK K PQKARTA E AQ K TP ---- V ET E K IASKVKEAKQ KQK ALPKQTAE 196
170 180 190
....*....|....*....|....*....|.
gi 578809903 748 K Q K N EGRP ET P kh RHDNRR D SG KP STEK K P E 778
Cdd:TIGR02223 197 T Q S N SKPI ET A -- PKADKA D KT KP KPKE K A E 225
PTZ00449
PTZ00449 104 kDa microneme/rhoptry antigen; Provisional
476-894
4.58e-07
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain]
Cd Length: 943
Bit Score: 55.85
E-value: 4.58e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 476 EI ERIERE S AIERERFSK E VQ DK - D K P LKKRKQDSY P QE A G G --- ATG G NRPA S Q E TGSTGN G SR P AL mvsidlhqagrv 551
Cdd:PTZ00449 484 EI KKLIKK S KKKLAPIEE E DS DK h D E P PEGPEASGL P PK A P G dke GEE G EHED S K E SDEPKE G GK P GE ------------ 551
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 552 dsqasi T QDSDSI KKP EEI K QCNDAPVSV L QEDIVGSLKSTPENH PE T PKK KSD P ELSKSEMKQSESR L A E SK -- P NENR 629
Cdd:PTZ00449 552 ------ T KEGEVG KKP GPA K EHKPSKIPT L SKKPEFPKDPKHPKD PE E PKK PKR P RSAQRPTRPKSPK L P E LL di P KSPK 625
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 630 LV E TKS S ENKLETKVETQTE E LKQNESRTTEC K QNE S TIV -- E PK QN E N ---------- RLSD TK PNDNKQNNGR S ETTK 697
Cdd:PTZ00449 626 RP E SPK S PKRPPPPQRPSSP E RPEGPKIIKSP K PPK S PKP pf D PK FK E K fyddyldaaa KSKE TK TTVVLDESFE S ILKE 705
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 698 SR PETP KQKGES - RP ET PK QKS D gh P E T P KQK g D G R P ETPKQKGESRPET P KQKNEGRP ETP KHRH ------------ D N 764
Cdd:PTZ00449 706 TL PETP GTPFTT p RP LP PK LPR D -- E E F P FEP - I G D P DAEQPDDIEFFTP P EEERTFFH ETP ADTP lpdilaeefkee D I 782
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 765 RRDS G K P - STE K K P EV - S K H KQDTKS D S P R L -- K SE R AEA L K - QRP D GR S VSESLRR D HDN K QKSDD R GE S erh RG D QSR 839
Cdd:PTZ00449 783 HAET G E P d EAM K R P DS p S E H EDKPPG D H P S L pk K RH R LDG L A l STT D LE S DAGRIAK D ASG K IVKLK R SK S --- FD D LTT 859
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 578809903 840 V RRP E TLRSSS R ---- NEH G IKS D SSK T DKL E R KH RH E SGDS R -- ER PS SGEQK S R P DS P R 894
Cdd:PTZ00449 860 V EEA E EMGAEA R kivv DDD G TEA D DED T HPP E E KH KS E VRRR R pp KK PS KPKKP S K P KK P K 920
PTZ00449
PTZ00449 104 kDa microneme/rhoptry antigen; Provisional
704-1098
8.71e-07
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain]
Cd Length: 943
Bit Score: 54.70
E-value: 8.71e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 704 K QKGESRPETPKQK SD G H petpkqkg D GR PE T P KQK G ES r P ET P kqkne G RP E TPKHR H DNRRD S GK P STEK KP EVS K HK 783
Cdd:PTZ00449 490 K KSKKKLAPIEEED SD K H -------- D EP PE G P EAS G LP - P KA P ----- G DK E GEEGE H EDSKE S DE P KEGG KP GET K EG 555
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 784 QDT K SDS P -- RL K SERAEA L KQR P DGRSVSESLRRDHDN K Q ksddrge SE R H R GD Q SRV R RPETLRSSS rnehgik S D SS 861
Cdd:PTZ00449 556 EVG K KPG P ak EH K PSKIPT L SKK P EFPKDPKHPKDPEEP K K ------- PK R P R SA Q RPT R PKSPKLPEL ------- L D IP 621
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 862 K TD K lerkh R H ES GD S RE RP SSGEQK S --- RP DS P RVKQ g DSNKSR S D K LG F k S P TS K ---- DD KRTEGN KSK VDTNKAH 934
Cdd:PTZ00449 622 K SP K ----- R P ES PK S PK RP PPPQRP S spe RP EG P KIIK - SPKPPK S P K PP F - D P KF K ekfy DD YLDAAA KSK ETKTTVV 694
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 935 P D NKA E F ---- PSYLLG G RSGALKNFVI PK IK RD KDGNVT ------- QETKKM E MKGE P KDKVEKIG lv E DLNKGAK P VV 1003
Cdd:PTZ00449 695 L D ESF E S ilke TLPETP G TPFTTPRPLP PK LP RD EEFPFE pigdpda EQPDDI E FFTP P EEERTFFH -- E TPADTPL P DI 772
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 1004 VLQKLSLD D VQKLIKDREDKSRSSLK P IKNKPSKS nk G SIDQSVL K ELPPEL LA ---- EI ES TM ------ PLCER VK MNK 1073
Cdd:PTZ00449 773 LAEEFKEE D IHAETGEPDEAMKRPDS P SEHEDKPP -- G DHPSLPK K RHRLDG LA lstt DL ES DA griakd ASGKI VK LKR 850
410 420 430
....*....|....*....|....*....|....
gi 578809903 1074 R K R ---- S TV N E KPKY - AE IS ---- S D EDNDS D E 1098
Cdd:PTZ00449 851 S K S fddl T TV E E AEEM g AE AR kivv D D DGTEA D D 884
PTZ00121
PTZ00121 MAEBL; Provisional
649-1125
2.47e-06
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 53.61
E-value: 2.47e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 649 EEL KQNESRTTEC K QNE s T I V E PKQNEN rls DT K PNDNKQNNGRSETTK S RPETP - KQ K GES R PETPKQKSD G HP E TP K Q 727
Cdd:PTZ00121 1030 EEL TEYGNNDDVL K EKD - I I D E DIDGNH --- EG K AEAKAHVGQDEGLKP S YKDFD f DA K EDN R ADEATEEAF G KA E EA K K 1105
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 728 KGD G RP E TPKQKG E S -- RP E TPKQKN E G R P ------- E TPKHRH D NR R DSGKPST E -- K K P E VSKHKQ D T K SDSPRL K S E 796
Cdd:PTZ00121 1106 TET G KA E EARKAE E A kk KA E DARKAE E A R K aedarka E EARKAE D AK R VEIARKA E da R K A E EARKAE D A K KAEAAR K A E 1185
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 797 --- R AE A L KQRP D G R SVSESLRRDHDN K QKSDDRG E SERH ---------- RG D QSRVRRP E TL R SSSRNEHGIKSDSSKT 863
Cdd:PTZ00121 1186 evr K AE E L RKAE D A R KAEAARKAEEER K AEEARKA E DAKK aeavkkaeea KK D AEEAKKA E EE R NNEEIRKFEEARMAHF 1265
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 864 DKLERKHRH E SGDSRERPSSG E Q K SRP D SPR ---- V K QG D SN K SRSDK lgf KSPTSKDD K RT E GN K S K V D TN K AHPDNKA 939
Cdd:PTZ00121 1266 ARRQAAIKA E EARKADELKKA E E K KKA D EAK kaee K K KA D EA K KKAEE --- AKKADEAK K KA E EA K K K A D AA K KKAEEAK 1342
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 940 EFPSYLLGGRSG A LKNFVIPKI K RDKDGNVTQ E T KK M em KGEP K D K V E KIGLVEDLN K G A KP vvvl Q K LSL D DVQ K li KD 1019
Cdd:PTZ00121 1343 KAAEAAKAEAEA A ADEAEAAEE K AEAAEKKKE E A KK K -- ADAA K K K A E EKKKADEAK K K A EE ---- D K KKA D ELK K -- AA 1414
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 1020 RED K SRSSL K PIKNKPS K SNK gsidqsv L K ELPP E LLAEI E STMPLC E RV K M - NKR K RSTVNE K PKY A EISSD E DNDS DE 1098
Cdd:PTZ00121 1415 AAK K KADEA K KKAEEKK K ADE ------- A K KKAE E AKKAD E AKKKAE E AK K A e EAK K KAEEAK K ADE A KKKAE E AKKA DE 1487
490 500
....*....|....*....|....*..
gi 578809903 1099 A FEF A RKM KKK EKQK K RK A YEP K LTP E 1125
Cdd:PTZ00121 1488 A KKK A EEA KKK ADEA K KA A EAK K KAD E 1514
PRK12678
PRK12678 transcription termination factor Rho; Provisional
693-907
8.70e-06
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain]
Cd Length: 672
Bit Score: 51.44
E-value: 8.70e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 693 SE T TKSRPETPKQKGESRPETPKQKSDGHPETPKQKGDGRPETPKQKGESRPETPKQKNEG R PETPKHRHDN R RDSG K PS 772
Cdd:PRK12678 67 AA T PAAPAAAARRAARAAAAARQAEQPAAEAAAAKAEAAPAARAAAAAAAEAASAPEAAQA R ERRERGEAAR R GAAR K AG 146
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 773 TEKKPEVSKHKQ D TKSDSPRLKSER aealk Q R PD G R svsesl R R D HDNKQKSDD RG ES E RHRG D QSRVR R PETLRSSS R N 852
Cdd:PRK12678 147 EGGEQPATEARA D AAERTEEEERDE ----- R R RR G D ------ R E D RQAEAERGE RG RR E ERGR D GDDRD R RDRREQGD R R 215
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 578809903 853 E HG iksdsskt DKLERKH R HESGDS R E R PSSGEQKS R P D SPRVKQG D SNKSRSDK 907
Cdd:PRK12678 216 E ER -------- GRRDGGD R RGRRRR R D R RDARGDDN R E D RGDRDGD D GEGRGGRR 262
PRK12678
PRK12678 transcription termination factor Rho; Provisional
692-889
2.14e-05
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain]
Cd Length: 672
Bit Score: 49.90
E-value: 2.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 692 RSETTKSRPETPKQKGESRPETPKQKSDGHPETPKQKGDGRPETPKQKGES R PETPKQKNEG R PETP K HRHDNRRDSGKP 771
Cdd:PRK12678 77 ARRAARAAAAARQAEQPAAEAAAAKAEAAPAARAAAAAAAEAASAPEAAQA R ERRERGEAAR R GAAR K AGEGGEQPATEA 156
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 772 STEKKPEVSKHKQ D TKSD -- SPRLKSER AE ALKQRPDGRSVSESLR RD HDNKQKSD DR G E SERH R GDQS R VR R PE tl R SS 849
Cdd:PRK12678 157 RADAAERTEEEER D ERRR rg DREDRQAE AE RGERGRREERGRDGDD RD RRDRREQG DR R E ERGR R DGGD R RG R RR -- R RD 234
170 180 190 200
....*....|....*....|....*....|....*....|
gi 578809903 850 S R NEH G iks D SSKT D KLE R KHRHES G DSRE R PSSGEQKS R 889
Cdd:PRK12678 235 R R DAR G --- D DNRE D RGD R DGDDGE G RGGR R GRRFRDRD R 271
dnaA
PRK14086 chromosomal replication initiator protein DnaA;
700-889
1.83e-04
chromosomal replication initiator protein DnaA;
Pssm-ID: 237605 [Multi-domain]
Cd Length: 617
Bit Score: 47.13
E-value: 1.83e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 700 P ET P KQKGE S R PE T P KQKSDGHPETPKQKG D G RP ETPK --- Q KGES RP ET P KQKNEGR ---- P ETPKHRHDNRRDS G K P S 772
Cdd:PRK14086 97 P PP P HARRT S E PE L P RPGRRPYEGYGGPRA D D RP PGLP rqd Q LPTA RP AY P AYQQRPE pgaw P RAADDYGWQQQRL G F P P 176
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 773 TEKKPEVS khkqdtk S DS P RLKSE R AEALKQ RP D grsvseslr R D HDNKQKSDD R GESE R H R G D qs R VR RPE TLRSSSRN 852
Cdd:PRK14086 177 RAPYASPA ------- S YA P EQERD R EPYDAG RP E --------- Y D QRRRDYDHP R PDWD R P R R D -- R TD RPE PPPGAGHV 238
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 578809903 853 EH G IKSDSSKT D KLERKH R ----- HESGDSRER P SS GE QKS R 889
Cdd:PRK14086 239 HR G GPGPPERD D APVVPI R psapg PLAAQPAPA P GP GE PTA R 280
Caldesmon
pfam02029 Caldesmon;
480-890
2.08e-04
Caldesmon;
Pssm-ID: 460421 [Multi-domain]
Cd Length: 495
Bit Score: 46.78
E-value: 2.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 480 IE R E SAIE RER FSKEVQDK dkplkk R K Q DSYPQEA G GA T GGNR P ASQETGSTGNGSR P ALMVSI D LHQ A G rvdsqasitq 559
Cdd:pfam02029 1 IE D E EEAA RER RRRAREER ------ R R Q KEEEEPS G QV T ESVE P NEHNSYEEDSELK P SGQGGL D EEE A F ---------- 64
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 560 d S D SIK K P EE IK Q CNDAPVSVL Q EDIVGSLKSTP E NHP E TPKKKSDP E L S KS E MK - QSE SRL AES K PN E NRLV E TKSS EN 638
Cdd:pfam02029 65 - L D RTA K R EE RR Q KRLQEALER Q KEFDPTIADEK E SVA E RKENNEEE E N S SW E KE e KRD SRL GRY K EE E TEIR E KEYQ EN 143
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 639 K LE T -------------- K V E TQT E ELKQ N ESRTTECKQNESTIVEP K QNENRLS D T K PN dnkqnngrsettksrpe T P K 704
Cdd:pfam02029 144 K WS T evrqaeeegeeeed K S E EAE E VPTE N FAKEEVKDEKIKKEKKV K YESKVFL D Q K RG ----------------- H P E 206
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 705 Q K GESRP E tp KQKSDGHPETPK Q K G DGRPETPKQKG E SRP E TPKQKN E G R petpkhrhdn RR DSG K P S T E KKP ev SKH KQ 784
Cdd:pfam02029 207 V K SQNGE E -- EVTKLKVTTKRR Q G G LSQSQEREEEA E VFL E AEQKLE E L R ---------- RR RQE K E S E E FEK -- LRQ KQ 272
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 785 dtksds PRLKS E RA E AL K Q R PDG R SV - S E SLR R DHDNKQKSDD R G E S E RH R GDQSRV RR ----------- PE T lr SSS RN 852
Cdd:pfam02029 273 ------ QEAEL E LE E LK K K R EER R KL l E E EEQ R RKQEEAERKL R E E E E KR R MKEEIE RR raeaaekrqkl PE D -- SSS EG 344
410 420 430
....*....|....*....|....*....|....*...
gi 578809903 853 EHGI K SD S S K TDK L ERKH R H E SGDSRERP SS GEQ K SR P 890
Cdd:pfam02029 345 KKPF K CF S P K GSS L KITE R A E FLNKSLQK SS SVK K TH P 382
PTZ00108
PTZ00108 DNA topoisomerase 2-like protein; Provisional
878-1102
3.96e-04
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain]
Cd Length: 1388
Bit Score: 46.19
E-value: 3.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 878 RERPSSGEQKS R PD S PRVKQGDSNKSRSD K LGF K SPTSKDDKRTEGNKSKVDTNKAHP D N K --- AEF P SYLLGGR SG ALK 954
Cdd:PTZ00108 1146 EVEEKEIAKEQ R LK S KTKGKASKLRKPKL K KKE K KKKKSSADKSKKASVVGNSKRVDS D E K rkl DDK P DNKKSNS SG SDQ 1225
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 955 NFVIPKIKRD K DGN V TQETK K m EMKGEPKDKVEKIGLVE DL N K GA KP VVVLQKL S LDDVQKLIKDREDKSR S SLKPIKNK 1034
Cdd:PTZ00108 1226 EDDEEQKTKP K KSS V KRLKS K - KNNSSKSSEDNDEFSSD DL S K EG KP KNAPKRV S AVQYSPPPPSKRPDGE S NGGSKPSS 1304
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 578809903 1035 P S K SNKGSIDQSV L KE L PPELLA E IEST mplc ERV K MNK R ------- KR S TVNEK P KYAEIS S DEDN D S D EAFEF 1102
Cdd:PTZ00108 1305 P T K KKVKKRLEGS L AA L KKKKKS E KKTA ---- RKK K SKT R vkqasas QS S RLLRR P RKKKSD S SSED D D D SEVDD 1375
PTZ00108
PTZ00108 DNA topoisomerase 2-like protein; Provisional
590-838
3.96e-04
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain]
Cd Length: 1388
Bit Score: 46.19
E-value: 3.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 590 KSTPENHPETPK K KSD P E L S K S E M K QSE S r L A ESKPNENRLVET K SSENKLET K VETQTEEL K Q N E S RTTECKQN E STIV 669
Cdd:PTZ00108 1156 QRLKSKTKGKAS K LRK P K L K K K E K K KKK S - S A DKSKKASVVGNS K RVDSDEKR K LDDKPDNK K S N S S GSDQEDDE E QKTK 1234
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 670 EP K QNEN RL SDT K P N D n KQNNGRSETTK S RPETPKQ K GESR P E t PKQKSDGH P ET P KQ kgdgr PETPKQK G E S R P ET P KQ 749
Cdd:PTZ00108 1235 PK K SSVK RL KSK K N N S - SKSSEDNDEFS S DDLSKEG K PKNA P K - RVSAVQYS P PP P SK ----- RPDGESN G G S K P SS P TK 1307
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 750 K NEGRPETPK hrhdnrrd SGKPSTE KK P E VSKHKQD t KS DSPRLKSERAEALKQRPDG R SVSESLRRDH D NKQKS DD RGE 829
Cdd:PTZ00108 1308 K KVKKRLEGS -------- LAALKKK KK S E KKTARKK - KS KTRVKQASASQSSRLLRRP R KKKSDSSSED D DDSEV DD SED 1378
....*....
gi 578809903 830 SERHRGDQS 838
Cdd:PTZ00108 1379 EDDEDDEDD 1387
PRK12678
PRK12678 transcription termination factor Rho; Provisional
692-899
4.07e-04
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain]
Cd Length: 672
Bit Score: 46.05
E-value: 4.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 692 R SETTKSRPETPKQKGESRPETPKQKSDGHPETPKQKGDG R PETPKQKGES R PETP K QKNE G RPETPKH R H D NRRDSGKP 771
Cdd:PRK12678 88 R QAEQPAAEAAAAKAEAAPAARAAAAAAAEAASAPEAAQA R ERRERGEAAR R GAAR K AGEG G EQPATEA R A D AAERTEEE 167
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 772 STEKKPEVSKHKQDTKSDSPRLKSE R A E ALKQRP D GRSVSESLRR D HDNKQKSD D R G ESERH R GDQS R VRRPE tl RSSSR 851
Cdd:PRK12678 168 ERDERRRRGDREDRQAEAERGERGR R E E RGRDGD D RDRRDRREQG D RREERGRR D G G DRRGR R RRRD R RDARG -- DDNRE 245
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 578809903 852 NEHGIKS D SSKTDKLE R KH R HESG D S R E R PSSGEQKS R P ds P RVKQG D 899
Cdd:PRK12678 246 DRGDRDG D DGEGRGGR R GR R FRDR D R R G R RGGDGGNE R E -- P ELRED D 291
PDS5
cd19953 Sister chromatid cohesion protein PDS5; Pds5 plays a crucial role in sister chromatid cohesion. ...
1720-1816
5.21e-04
Sister chromatid cohesion protein PDS5; Pds5 plays a crucial role in sister chromatid cohesion. Together with WapI and Scc3, it is involved in the release of the cohesin complex from chromosomes during S phase. The core of the cohesin complex consists of a coiled-coiled heterodimer of Smc1 and Smc30, together with Scc1 (also called kleisin). Pds5 interacts with Scc1 via a conserved patch on the surface of its heat repeats. Pds5 also promotes the acetylation of Smc3 that protects cohesin from releasing activity in G2 phase.
Pssm-ID: 410996 [Multi-domain]
Cd Length: 630
Bit Score: 45.59
E-value: 5.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 1720 IA VR TK A M K C L SEVV A VDP S - IL A R ldmqrg VH -------- GR LM D N S TS VR E A A VE LLGRFV L CR P Q LAE QYYDM L IE R 1790
Cdd:cd19953 259 VD VR LL A T K L L GKMF A EKG S a GF A Q ------ TY pslwkefl GR FN D K S PE VR L A W VE SAKHIL L NH P D LAE DILEA L KK R 332
90 100
....*....|....*....|....*.
gi 578809903 1791 I LD TGIS VR KRVI K ILR D ICI E QPTF 1816
Cdd:cd19953 333 L LD PDEK VR LAAV K AIC D LAY E DLLH 358
PDS5
pfam20168 Sister chromatid cohesion protein PDS5 protein; This entry represents the Sister chromatid ...
1719-1862
5.95e-04
Sister chromatid cohesion protein PDS5 protein; This entry represents the Sister chromatid cohesion protein PDS5. The large PDS5 molecule is exclusively alpha helical, composed of a large number of HEAT-like repeats and helical extensions/additions that deviate from the HEAT repeat pattern.
Pssm-ID: 466319 [Multi-domain]
Cd Length: 1051
Bit Score: 45.66
E-value: 5.95e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 1719 AI AVR TKAMKCLSEVVAVD P SI la R LDMQRGVHG RL M D NSTS VR E AAV ELL G RF ------- V LCRPQ L AE qyydm L I ER I 1791
Cdd:pfam20168 297 SV AVR IAWVEAAKQILLNH P DL -- R SEILEALKD RL L D PDEK VR L AAV KAI G DL dyetllh V VSEKL L KT ----- L A ER L 369
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 1792 L D TGI SVRK RVI K I L RDI ------- CI E QP tf PKIT E MCV ---- K MIR -- RV ND E E g I KK LV NETFQKLWF t P TPHN D K E 1858
Cdd:pfam20168 370 R D KKP SVRK EAL K T L AKL ynvayge IE E GD -- EEAI E KFG wipn K ILH ly YI ND P E - I RA LV ERVLFEYLL - P ALLD D E E 445
....
gi 578809903 1859 AMT R 1862
Cdd:pfam20168 446 RVK R 449
PspC_subgroup_1
NF033838 pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ...
475-759
1.42e-03
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain]
Cd Length: 684
Bit Score: 44.23
E-value: 1.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 475 AE I E RIE R ES A IER E RFS K E V -- QDK DKP l K K R KQDSYPQ E AGGATGGNRP A SQETG S T G NGSR P A lmvsidlhqagrv D 552
Cdd:NF033838 233 AE E E AKR R AD A KLK E AVE K N V at SEQ DKP - K R R AKRGVLG E PATPDKKEND A KSSDS S V G EETL P S ------------- P 298
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 553 S QASITQDSDSI KK P EE I - K QCN D apvsvl Q ED ivgslk STPE N H P ETPK K KSDP E LSK S EM K QS E SR L aeskpnen R LV 631
Cdd:NF033838 299 S LKPEKKVAEAE KK V EE A k K KAK D ------ Q KE ------ EDRR N Y P TNTY K TLEL E IAE S DV K VK E AE L -------- E LV 358
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 632 ETKSS E NKL E T K VETQTEEL kqnesrtt E C K QN E S T IV E PKQNENR lsd TKPNDN K QNNGRSETT K SR P - E T P KQKGESR 710
Cdd:NF033838 359 KEEAK E PRN E E K IKQAKAKV -------- E S K KA E A T RL E KIKTDRK --- KAEEEA K RKAAEEDKV K EK P a E Q P QPAPAPQ 427
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 711 PE T P KQ K SDGHP E T PK - Q K GDGR ---------- P E TPKQKGESR P et PK QKNEGR P E TPK 759
Cdd:NF033838 428 PE K P AP K PEKPA E Q PK a E K PADQ qaeedyarrs E E EYNRLTQQQ P -- PK TEKPAQ P S TPK 485
PRK08581
PRK08581 amidase domain-containing protein;
585-869
2.56e-03
amidase domain-containing protein;
Pssm-ID: 236304 [Multi-domain]
Cd Length: 619
Bit Score: 43.24
E-value: 2.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 585 IVGS L k ST P ENHPET P K K K S DPELSKSEM K Q S ESR l AE SK PNENRLVETKSSE N KLET kv ETQTEELKQNE S R T TE ckqn 664
Cdd:PRK08581 16 VLPT L - TS P TAYADD P Q K D S TAKTTSHDS K K S NDD - ET SK DTSSKDTDKADNN N TSNQ -- DNNDKKFSTID S S T SD ---- 87
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 665 EST I VEPKQNENRLSDTKP -- ND NK QNNGR S E TT KSRPETPKQKGE S RP E T P KQKSDGHPETP K QKGDGRPETPKQKGES 742
Cdd:PRK08581 88 SNN I IDFIYKNLPQTNINQ ll TK NK YDDNY S L TT LIQNLFNLNSDI S DY E Q P RNSEKSTNDSN K NSDSSIKNDTDTQSSK 167
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 743 RPETPK QK NEGRPE T PKHRHDNRRD S G KP STEKKPEVSKHKQ DT KSDSP rl K S ERAEALKQRPDGRSVSES lr RDHDN K Q 822
Cdd:PRK08581 168 QDKADN QK APSSNN T KPSTSNKQPN S P KP TQPNQSNSQPASD DT ANQKS -- S S KDNQSMSDSALDSILDQY -- SEDAK K T 243
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 578809903 823 KS D DRGE S ERHRGDQ S RVRR P E t L RSSSRNE H GI K SDS S KTDKLERK 869
Cdd:PRK08581 244 QK D YASQ S KKDKTET S NTKN P Q - L PTQDELK H KS K PAQ S FENDVNQS 289
PTZ00108
PTZ00108 DNA topoisomerase 2-like protein; Provisional
610-919
2.68e-03
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain]
Cd Length: 1388
Bit Score: 43.50
E-value: 2.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 610 KS E MKQS E SR L AES K pne N RLVET -- KSSEN K L E TKV E t QT EE LKQN E SRTTECKQNESTIVEP K QNENR L SDTKPNDN K 687
Cdd:PTZ00108 1108 NA E LEKK E KE L EKL K --- N TTPKD mw LEDLD K F E EAL E - EQ EE VEEK E IAKEQRLKSKTKGKAS K LRKPK L KKKEKKKK K 1183
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 688 qnngr S ETT KS RPETPKQ kgesrp ETPKQK SD GHPETPKQKGDGRPETPKQKG E SRP E TPKQKNEGRPETP K HRHD N RRD 767
Cdd:PTZ00108 1184 ----- S SAD KS KKASVVG ------ NSKRVD SD EKRKLDDKPDNKKSNSSGSDQ E DDE E QKTKPKKSSVKRL K SKKN N SSK 1252
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 768 S GKPST E KKPEVSKHKQDT K SDSP R LKS er AEALKQR P DG R S vseslrrdh D NKQKSDDRGE S ERHRGDQS R VR rpetlr 847
Cdd:PTZ00108 1253 S SEDND E FSSDDLSKEGKP K NAPK R VSA -- VQYSPPP P SK R P --------- D GESNGGSKPS S PTKKKVKK R LE ------ 1315
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 578809903 848 sssrnehg IKSDSS K TD K LER K HRHESGD S RE R P -- S S GE Q K SR PDSPRV K QGDSNK S RS D KLGFKSPTSKD D K 919
Cdd:PTZ00108 1316 -------- GSLAAL K KK K KSE K KTARKKK S KT R V kq A S AS Q S SR LLRRPR K KKSDSS S ED D DDSEVDDSEDE D D 1381
PTZ00112
PTZ00112 origin recognition complex 1 protein; Provisional
588-785
3.03e-03
origin recognition complex 1 protein; Provisional
Pssm-ID: 240274 [Multi-domain]
Cd Length: 1164
Bit Score: 43.05
E-value: 3.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 588 SL K STPE N HPETPKK K S D PELS K SEMKQ SE SRLAESKPNEN R LVETKSS ENK LET K VETQTEELKQNES R TTE C KQNE S T 667
Cdd:PTZ00112 219 ND K NKEK N KEKDKNI K K D RDGD K QTKRN SE KSKVQNSHFDV R ILRSYTK ENK KDE K NVVSGIRSSVLLK R KSQ C LRKD S Y 298
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 668 IVEPK Q NENRLS D T K p N DNKQ NNG R S ETTKSRPETPKQK G ES R P etpkqk S DGH P ET P KQ K GDGRPE T PKQ K g ESRPETP 747
Cdd:PTZ00112 299 VYSNH Q KKAKTG D P K - N IIHR NNG S S NSNNDDTSSSNHL G SN R I ------ S NRN P SS P YK K QTTTKH T NNT K - NNKYNKT 370
170 180 190
....*....|....*....|....*....|....*...
gi 578809903 748 K QKNEGRPETPK H RHD N R R D S GK P ST E K K PEVSKH K QD 785
Cdd:PTZ00112 371 K TTQKFNHPLRH H ATI N K R S S ML P MS E Q K GRGASE K SE 408
DUF612
pfam04747 Protein of unknown function, DUF612; This family includes several uncharacterized proteins ...
468-906
5.37e-03
Protein of unknown function, DUF612; This family includes several uncharacterized proteins from Caenorhabditis elegans.
Pssm-ID: 282585 [Multi-domain]
Cd Length: 511
Bit Score: 41.97
E-value: 5.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 468 E V E LDAL A EI E RIERESAI E R ER FS KE VQD K DKP LKK RKQDSYPQE A GG A TGGNRPASQETG ST GNGSRPALM V S idlhq 547
Cdd:pfam04747 106 E A E AKKR A AQ E EEHKQWKA E Q ER IQ KE QEK K EAD LKK LQAEKKKEK A VK A EKAEKAEKTKKA ST PAPVEEEIV V K ----- 180
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 548 agrvdsqa SITQ D SDSIKK PE eikqcndapvsvlqedivgsl KS TP E N H P ET P KKKSDP --- ELS K SEM K Q SES RLAESK 624
Cdd:pfam04747 181 -------- KVAN D RSAAPA PE --------------------- PK TP T N T P AE P AEQVQE itg KKN K KNK K K SES EATAAP 231
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 625 PNENRL VE TK --- SS E NKLETKVETQTEELKQNE S RTTECKQNES T I VEP KQNENRLSDTKPND NK QNNGR SE TT K SRP E 701
Cdd:pfam04747 232 ASVEQV VE QP kvv TE E PHQQAAPQEKKNKKNKRK S ESENVPAASE T P VEP VVETTPPASENQKK NK KDKKK SE SE K VVE E 311
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 702 TPKQKG esr P ETP K QKS D GHPE ----- T P K QKGDGR P - ETP KQKG E SRP E TPKQKNEGRPE TP khrhdnrrdsgk P S TE K 775
Cdd:pfam04747 312 PVQAEA --- P KSK K PTA D DNMD fldfv T A K EEPKDE P a ETP AAPV E EVV E NVVENVVEKST TP ------------ P A TE N 376
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 776 K PEVS K H K Q dt KS D S PRLKSERA E ALKQR P DGRS V S E SLRRDHD NK Q K S - D D RGE SE RHRGDQSR V RRPETLRSSSRNEH 854
Cdd:pfam04747 377 K KKNK K D K K -- KS E S EKVTEQPV E SAPAP P QVEQ V V E TTPPASE NK K K N k K D KKK SE SEKAVEEP V QAAPSSKKPTADDN 454
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 578809903 855 GIKS D -- SS K T DK L E RKHR H ESGDSRER P SSGEQKSRPDSPRV K QGDSN K SRSD 906
Cdd:pfam04747 455 MDFL D fv TA K P DK S E SVEE H IAAPMIVE P AHADEETAAAAEGK K KNKKD K KKKE 508
PRK14949
PRK14949 DNA polymerase III subunits gamma and tau; Provisional
337-679
6.43e-03
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237863 [Multi-domain]
Cd Length: 944
Bit Score: 42.02
E-value: 6.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 337 E Q S EKAAMYDIISSPSK DST K ltl RL S R V RS S DM D Q Q E D MI S GVE NS NVSEN -- D IPFNVQYPGQTSKTPITPQDINR PL 414
Cdd:PRK14949 473 E A S SSLDADNSAVPEQI DST A --- EQ S V V NP S VT D T Q V D DT S ASN NS AADNT vd D NYSAEDTLESNGLDEGDYAQDSA PL 549
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 415 N A A Q CLSQQEQTAFLP A NQVPVLQQNTSVA A KQPQTSVVQN Q QQISQQGPIYDEVE ------ LDA - LA E ierie R E S AIE 487
Cdd:PRK14949 550 D A Y Q DDYVAFSSESYN A LSDDEQHSANVQS A QSAAEAQPSS Q SLSPISAVTTAAAS ladddi LDA v LA A ----- R D S LLS 624
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 488 r ERFSKEVQDK D -- K PLKK RK QDSY P QE A GG A tggnr PA S QETG S TGNGSRP A LMVSIDLHQAGRVD S QASITQD S D S IK 565
Cdd:PRK14949 625 - DLDALSPKEG D gk K SSAD RK PKTP P SR A PP A ----- SL S KPAS S PDASQTS A SFDLDPDFELATHQ S VPEAALA S G S AP 698
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 566 K P EEIKQCN D A P vsvlqedivgslkst P ENHPETPKKKS D PELSKS E MKQ SES RLAE S KPNENRL vetkss E NKLETKVE 645
Cdd:PRK14949 699 A P PPVPDPY D R P --------------- P WEEAPEVASAN D GPNNAA E GNL SES VEDA S NSELQAV ------ E QQATHQPQ 757
330 340 350
....*....|....*....|....*....|....
gi 578809903 646 T Q T E elkqn ESRTTECKQNES T IV E PKQN E NR L S 679
Cdd:PRK14949 758 V Q A E ----- AQSPASTTALTQ T SS E VQDT E LN L V 786
PRK12678
PRK12678 transcription termination factor Rho; Provisional
611-842
9.32e-03
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain]
Cd Length: 672
Bit Score: 41.43
E-value: 9.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 611 S E M KQS E ------ SRLAESKPNENRLVETKSSENKLETKVETQTEELK Q NESRTTEC K QNESTIVEPKQNENRLSDTK P N 684
Cdd:PRK12678 44 S G M RKG E liaaik EARGGGAAAAAATPAAPAAAARRAARAAAAARQAE Q PAAEAAAA K AEAAPAARAAAAAAAEAASA P E 123
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 685 DNKQNNG R SETTKS R PETPKQK GE SRPETPK ------ QKSDGHP E TPKQKGD G RP E TPKQKG E S ----- R P E TPKQKNEG 753
Cdd:PRK12678 124 AAQARER R ERGEAA R RGAARKA GE GGEQPAT earada AERTEEE E RDERRRR G DR E DRQAEA E R gergr R E E RGRDGDDR 203
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809903 754 RPETPKHRH D N R RDS G K pstekkpevskhkqdtksdsp R LKSE R AEALKQ R PDGRSVSESL R R D h DNKQKS DD RGESERH 833
Cdd:PRK12678 204 DRRDRREQG D R R EER G R --------------------- R DGGD R RGRRRR R DRRDARGDDN R E D - RGDRDG DD GEGRGGR 261
....*....
gi 578809903 834 RG DQS R V R R 842
Cdd:PRK12678 262 RG RRF R D R D 270
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
