|
Name |
Accession |
Description |
Interval |
E-value |
| APC_basic |
pfam05956 |
APC basic domain; This region of the APC family of proteins is known as the basic domain. It ... |
1786-2113 |
5.50e-94 |
|
APC basic domain; This region of the APC family of proteins is known as the basic domain. It contains a high proportion of positively charged amino acids and interacts with microtubules.
:
Pssm-ID: 428690 [Multi-domain] Cd Length: 336 Bit Score: 308.34 E-value: 5.50e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1786 AVLRGRTVIYVPSpAPRAQPKGTPGPRATPRKVAppclaqpaAPAKVPSPGQQRSRSLHRPAKTSELATLSQPPRSATPP 1865
Cdd:pfam05956 1 VVFRGRTVIYMPG-VKESQPSTSPPPKKTPPKTD--------APAKNPNLGQQRSRSLHRLGKPSELADLSPPKRSATPP 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1866 ARLAKTPSSSSSQTSPASQPLPRKRPPVTQAAGALPGPGAS------PVPKTPARTLLAKQ--HKTQRSPVRIPFMQRPA 1937
Cdd:pfam05956 72 ARISKAPSSGSSRDSTPSRPPQKKLTSPSQSPGRLPGSGGRnklsplPKTKSPARASTKKSgsHKTQKSPVRIPFMQTPT 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1938 R-----RGPPPLARAVPEPgpRGRAGTEAGPGARGGRLGLVRVASALSSGSESSDRsGFRRQLTFIKESPG-LRRRRSEL 2011
Cdd:pfam05956 152 KqtglpRNPSPLVTNQPEP--RSESASKGLRSLPGKRLDLVRMSSARSSGSESDRS-GFLRQLTFIKESPSlLLRRRLEL 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 2012 SSAESAASAPQGASPRRGRPALPAVFLCSSRCEELRAAPRQGPAPARQRPPAARPSPGERPARRTTSESPSRLPVRAPAA 2091
Cdd:pfam05956 229 SASESLSPSSQPASPRRSRPGLPAVFLCSSRCQELKGWRKQPPNPNSRAEPSDRPLTRRRPPRRTSSESPSRLPVRNGTW 308
|
330 340
....*....|....*....|..
gi 578832902 2092 RPETVKRYASLPHISVARRPDG 2113
Cdd:pfam05956 309 KRETFKRYSSLPHINVWRRTGS 330
|
|
| APC_rep |
pfam18797 |
Adenomatous polyposis coli (APC) repeat; Adenomatous polyposis coli contains an armadillo ... |
357-431 |
2.81e-33 |
|
Adenomatous polyposis coli (APC) repeat; Adenomatous polyposis coli contains an armadillo repeat and uses its highly conserved surface groove to recognize the APC-binding region (ABR) of Asef. This entry represents a single repeat unit of the Armadillo region.
:
Pssm-ID: 465870 Cd Length: 74 Bit Score: 123.81 E-value: 2.81e-33
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 578832902 357 SQPDQGLARKEMRVLHVLEQIRAYCETCWDWLQARDGGPEGGGAGSaPIPIEPQICQATCAVMKLSFDEEYRRAM 431
Cdd:pfam18797 1 SQPDDKRGRREMRVLHLLEQIRAYCETCWDWQESHSRGPEGDSNPM-PSPIEHQICPAICALMKLSFDEEHRHAM 74
|
|
| APC_N_CC |
pfam16689 |
Coiled-coil N-terminus of APC, dimerization domain; APC_N_CC is the N-terminal, coiled-coil ... |
6-57 |
8.17e-26 |
|
Coiled-coil N-terminus of APC, dimerization domain; APC_N_CC is the N-terminal, coiled-coil dimerization domain of the adenomatosis polyposis coli (APC) tumour-repressor proteins. It plays a key role in the regulation of cellular levels of the oncogene product beta-catenin. Coiled-coil regions are binding repeats that in this case bind to the armadillo repeat region of beta-catenin.
:
Pssm-ID: 435517 Cd Length: 52 Bit Score: 101.60 E-value: 8.17e-26
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 578832902 6 APYEQLVRQVEALKAENSHLRQELRDNSSHLSKLETETSGMKEVLKHLQGKL 57
Cdd:pfam16689 1 ASYDQLLRQVEALKLENTTLRQELRDNSSHLSKLETEASNMKEVLKHLQGSI 52
|
|
| Arm_APC_u3 super family |
cl25003 |
Armadillo-associated region on APC; Arm_APC_u3 is a semi-unstructured region lying immediately ... |
697-944 |
2.01e-20 |
|
Armadillo-associated region on APC; Arm_APC_u3 is a semi-unstructured region lying immediately downstream of the armadillo fold before the beta-catenin binding motifs, APC_crr, pfam05923, on APC or adenomatous polyposis coli proteins in higher eukaryotes. The function is not known.
The actual alignment was detected with superfamily member pfam16629:
Pssm-ID: 435476 Cd Length: 293 Bit Score: 94.27 E-value: 2.01e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 697 HRPAKHQAAaTAVSPGSCVPSLYVRKQRALEAELDARHLAQALEHLEKQGPPAAEaaTKKPlpplRHLDGLAQDYASDSG 776
Cdd:pfam16629 1 NRPAKYKDA-NIMSPGSSLPSLHVRKQKALEAELDAQHLSETFDNIDNLSPKASH--RNKQ----RHKQNVYSEYVLDSG 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 777 CFDDDDAPSSlaaaaaTGEPASPAALSLFLGSPFLQGQAlARTPPTRRGGKEAEKDTSGEAAVAAKAKA----------- 845
Cdd:pfam16629 74 RHDDSVCRSD------NFNTGNVTVLSPYLNTTVLPSSS-SRDSRGNAESSRSEKDRSLDRERGAGLSNfhpatensgns 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 846 ------KLALAVARIDQLVEDISALHTSSDDSFSLSSGDP---GQEAPREGRAQSCSPCRGPEG-GRREAGSRAHPLLRL 915
Cdd:pfam16629 147 skrigmQISTTAAQIAKVMEEVSSMHISQEDRSSGSTSDMhcmQDDRNSIRRSSTAHPHSNVYSfNKSESSNRPCPMPYM 226
|
250 260
....*....|....*....|....*....
gi 578832902 916 KAAHASLSNDSLNSGSASDGYCPREHMLP 944
Cdd:pfam16629 227 KMEYKRASNDSLNSVSSSDGYGKRGQMKP 255
|
|
| Suppressor_APC |
pfam11414 |
Adenomatous polyposis coli tumour suppressor protein; The tumour suppressor protein, APC, has ... |
124-205 |
2.51e-20 |
|
Adenomatous polyposis coli tumour suppressor protein; The tumour suppressor protein, APC, has a nuclear export activity as well as many different intracellular functions. The structure consists of three alpha-helices forming two separate antiparallel coiled coils.
:
Pssm-ID: 463275 Cd Length: 82 Bit Score: 87.31 E-value: 2.51e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 124 SRATIRLLEELDRERCFLLNEIEKEEKEKLWYYSQLQGLSKRLDELPHVETQFSMQMDLIRQQLEFEAQHIRSLMEERFG 203
Cdd:pfam11414 1 DYNMLKRMKQLEQEKDVLLQGLEMVERARDWYQQQLQEVQERQKYLGANGTYFDYGSDAQQERLEFLLARIQEVNRCLGG 80
|
..
gi 578832902 204 TS 205
Cdd:pfam11414 81 LI 82
|
|
| PHA03247 super family |
cl33720 |
large tegument protein UL36; Provisional |
1315-1911 |
5.78e-08 |
|
large tegument protein UL36; Provisional
The actual alignment was detected with superfamily member PHA03247:
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 58.80 E-value: 5.78e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1315 FAGHRRREEGP--APTGSRPRG-AADQELELLRECLGAavPARLRKVASALVPGRRALPVPV---YMLVPAPAPAQEDDS 1388
Cdd:PHA03247 2425 FVGSEEIEELPfvSPGGDVLAGlAADGDPFFARTILGA--PFSLSLLLGELFPGAPVYRRPAearFPFAAGAAPDPGGGG 2502
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1389 CTDSAEGTPVNFSSAASLSDETLQGP--PR-------------DQPGGPAGRQRPTGRPTSARQAMGHRHKAGGAGRSAE 1453
Cdd:PHA03247 2503 PPDPDAPPAPSRLAPAILPDEPVGEPvhPRmltwirgleelasDDAGDPPPPLPPAAPPAAPDRSVPPPRPAPRPSEPAV 2582
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1454 QSRGAgknraglelplgRPPSAPADKDGSKPGRTRGDGALQSLCLTTPTEEAVY-------CFYGNDSDEEPPAAAPTPT 1526
Cdd:PHA03247 2583 TSRAR------------RPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPdppppspSPAANEPDPHPPPTVPPPE 2650
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1527 HRRTSAIPRAFTRERPQGRKEAPAPSKAAPAAPPPARTQPSL-----IADETPPCYSLSSSASSLSEPEPSEPPAVHPRG 1601
Cdd:PHA03247 2651 RPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVgsltsLADPPPPPPTPEPAPHALVSATPLPPGPAAARQ 2730
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1602 REPAVTKDPGPGGGRDSSPSPRAAEELLQRCISSALPRRRPPVSGLRRRKPRATrldeRPAEGSRERGEEAAGSDRasdl 1681
Cdd:PHA03247 2731 ASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLT----RPAVASLSESRESLPSPW---- 2802
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1682 DSVEWRAIQEGANSIVTWLHQAAAATREASSESDSILSFVSGlsvgsTLQPPKHRKGRQAEGEmGSARRPEKRGAASVkt 1761
Cdd:PHA03247 2803 DPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPG-----PPPPSLPLGGSVAPGG-DVRRRPPSRSPAAK-- 2874
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1762 sgsprsPAGPEKPRGTQKTTPGVPavlrgrtviyvPSPAPRAQPKGTPGPRATPRKVAPPCLAQPAAPAKVPSPG-QQRS 1840
Cdd:PHA03247 2875 ------PAAPARPPVRRLARPAVS-----------RSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPpPPPP 2937
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 578832902 1841 RSLHRPAKTSELATLSQPPRSATPPARLAktpsssssqTSPASQPLPRKRPPvtQAAGALPGPGASPVPKT 1911
Cdd:PHA03247 2938 RPQPPLAPTTDPAGAGEPSGAVPQPWLGA---------LVPGRVAVPRFRVP--QPAPSREAPASSTPPLT 2997
|
|
| Arm |
pfam00514 |
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ... |
615-654 |
1.18e-06 |
|
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.
:
Pssm-ID: 425727 [Multi-domain] Cd Length: 41 Bit Score: 47.06 E-value: 1.18e-06
10 20 30 40
....*....|....*....|....*....|....*....|
gi 578832902 615 EDYRQVLRDHNCLQTLLQHLTSHSLTIVSNACGTLWNLSA 654
Cdd:pfam00514 2 PENKQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLAA 41
|
|
| PHA03247 super family |
cl33720 |
large tegument protein UL36; Provisional |
2002-2227 |
4.56e-05 |
|
large tegument protein UL36; Provisional
The actual alignment was detected with superfamily member PHA03247:
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 49.17 E-value: 4.56e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 2002 PGLRRRRSELSSAESAASAPQGASPRRGRPALPAVFLCSSRCEELRAAPRQGPAPARQRPPAARPSP----GERPARRTT 2077
Cdd:PHA03247 258 PPVVGEGADRAPETARGATGPPPPPEAAAPNGAAAPPDGVWGAALAGAPLALPAPPDPPPPAPAGDAeeedDEDGAMEVV 337
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 2078 SESP---SRLPVRAPAARPETVKRYASLPHISVARRPDGAVPAAPASADAAR-------RSSDGEPRPLPRVAAPGTTwr 2147
Cdd:PHA03247 338 SPLPrprQHYPLGFPKRRRPTWTPPSSLEDLSAGRHHPKRASLPTRKRRSARhaatpfaRGPGGDDQTRPAAPVPASV-- 415
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 2148 riRDEDVPHILRSTLPATALPLRGSTPeDAPAGPPPRKTSDAVVQTEEVAAPKTNSSTSPSLET---REPPGAPAGGQLS 2224
Cdd:PHA03247 416 --PTPAPTPVPASAPPPPATPLPSAEP-GSDDGPAPPPERQPPAPATEPAPDDPDDATRKALDAlreRRPPEPPGADLAE 492
|
...
gi 578832902 2225 LLG 2227
Cdd:PHA03247 493 LLG 495
|
|
| APC_r |
pfam05923 |
APC repeat; This short region is found repeated in the mid region of the adenomatous polyposis ... |
1260-1281 |
2.33e-03 |
|
APC repeat; This short region is found repeated in the mid region of the adenomatous polyposis proteins (APCs). In the human protein many cancer-linked SNPs are found near the first three occurrences of the motif. These repeats bind beta-catenin.
:
Pssm-ID: 461781 Cd Length: 24 Bit Score: 37.36 E-value: 2.33e-03
|
| Arm |
pfam00514 |
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ... |
525-562 |
9.38e-03 |
|
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.
:
Pssm-ID: 425727 [Multi-domain] Cd Length: 41 Bit Score: 35.89 E-value: 9.38e-03
10 20 30
....*....|....*....|....*....|....*...
gi 578832902 525 KKVLREAGSVTALVQCvLRATKESTLKSVLSALWNLSA 562
Cdd:pfam00514 5 KQAVIEAGAVPPLVRL-LSSPDEEVQEEAAWALSNLAA 41
|
|
| Arm |
pfam00514 |
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ... |
661-696 |
9.76e-03 |
|
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.
:
Pssm-ID: 425727 [Multi-domain] Cd Length: 41 Bit Score: 35.89 E-value: 9.76e-03
10 20 30
....*....|....*....|....*....|....*.
gi 578832902 661 ELLWDLGAVGMLRNLVHSKHKMIAMGSAAALRNLLA 696
Cdd:pfam00514 6 QAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLAA 41
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| APC_basic |
pfam05956 |
APC basic domain; This region of the APC family of proteins is known as the basic domain. It ... |
1786-2113 |
5.50e-94 |
|
APC basic domain; This region of the APC family of proteins is known as the basic domain. It contains a high proportion of positively charged amino acids and interacts with microtubules.
Pssm-ID: 428690 [Multi-domain] Cd Length: 336 Bit Score: 308.34 E-value: 5.50e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1786 AVLRGRTVIYVPSpAPRAQPKGTPGPRATPRKVAppclaqpaAPAKVPSPGQQRSRSLHRPAKTSELATLSQPPRSATPP 1865
Cdd:pfam05956 1 VVFRGRTVIYMPG-VKESQPSTSPPPKKTPPKTD--------APAKNPNLGQQRSRSLHRLGKPSELADLSPPKRSATPP 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1866 ARLAKTPSSSSSQTSPASQPLPRKRPPVTQAAGALPGPGAS------PVPKTPARTLLAKQ--HKTQRSPVRIPFMQRPA 1937
Cdd:pfam05956 72 ARISKAPSSGSSRDSTPSRPPQKKLTSPSQSPGRLPGSGGRnklsplPKTKSPARASTKKSgsHKTQKSPVRIPFMQTPT 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1938 R-----RGPPPLARAVPEPgpRGRAGTEAGPGARGGRLGLVRVASALSSGSESSDRsGFRRQLTFIKESPG-LRRRRSEL 2011
Cdd:pfam05956 152 KqtglpRNPSPLVTNQPEP--RSESASKGLRSLPGKRLDLVRMSSARSSGSESDRS-GFLRQLTFIKESPSlLLRRRLEL 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 2012 SSAESAASAPQGASPRRGRPALPAVFLCSSRCEELRAAPRQGPAPARQRPPAARPSPGERPARRTTSESPSRLPVRAPAA 2091
Cdd:pfam05956 229 SASESLSPSSQPASPRRSRPGLPAVFLCSSRCQELKGWRKQPPNPNSRAEPSDRPLTRRRPPRRTSSESPSRLPVRNGTW 308
|
330 340
....*....|....*....|..
gi 578832902 2092 RPETVKRYASLPHISVARRPDG 2113
Cdd:pfam05956 309 KRETFKRYSSLPHINVWRRTGS 330
|
|
| APC_rep |
pfam18797 |
Adenomatous polyposis coli (APC) repeat; Adenomatous polyposis coli contains an armadillo ... |
357-431 |
2.81e-33 |
|
Adenomatous polyposis coli (APC) repeat; Adenomatous polyposis coli contains an armadillo repeat and uses its highly conserved surface groove to recognize the APC-binding region (ABR) of Asef. This entry represents a single repeat unit of the Armadillo region.
Pssm-ID: 465870 Cd Length: 74 Bit Score: 123.81 E-value: 2.81e-33
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 578832902 357 SQPDQGLARKEMRVLHVLEQIRAYCETCWDWLQARDGGPEGGGAGSaPIPIEPQICQATCAVMKLSFDEEYRRAM 431
Cdd:pfam18797 1 SQPDDKRGRREMRVLHLLEQIRAYCETCWDWQESHSRGPEGDSNPM-PSPIEHQICPAICALMKLSFDEEHRHAM 74
|
|
| APC_N_CC |
pfam16689 |
Coiled-coil N-terminus of APC, dimerization domain; APC_N_CC is the N-terminal, coiled-coil ... |
6-57 |
8.17e-26 |
|
Coiled-coil N-terminus of APC, dimerization domain; APC_N_CC is the N-terminal, coiled-coil dimerization domain of the adenomatosis polyposis coli (APC) tumour-repressor proteins. It plays a key role in the regulation of cellular levels of the oncogene product beta-catenin. Coiled-coil regions are binding repeats that in this case bind to the armadillo repeat region of beta-catenin.
Pssm-ID: 435517 Cd Length: 52 Bit Score: 101.60 E-value: 8.17e-26
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 578832902 6 APYEQLVRQVEALKAENSHLRQELRDNSSHLSKLETETSGMKEVLKHLQGKL 57
Cdd:pfam16689 1 ASYDQLLRQVEALKLENTTLRQELRDNSSHLSKLETEASNMKEVLKHLQGSI 52
|
|
| Arm_APC_u3 |
pfam16629 |
Armadillo-associated region on APC; Arm_APC_u3 is a semi-unstructured region lying immediately ... |
697-944 |
2.01e-20 |
|
Armadillo-associated region on APC; Arm_APC_u3 is a semi-unstructured region lying immediately downstream of the armadillo fold before the beta-catenin binding motifs, APC_crr, pfam05923, on APC or adenomatous polyposis coli proteins in higher eukaryotes. The function is not known.
Pssm-ID: 435476 Cd Length: 293 Bit Score: 94.27 E-value: 2.01e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 697 HRPAKHQAAaTAVSPGSCVPSLYVRKQRALEAELDARHLAQALEHLEKQGPPAAEaaTKKPlpplRHLDGLAQDYASDSG 776
Cdd:pfam16629 1 NRPAKYKDA-NIMSPGSSLPSLHVRKQKALEAELDAQHLSETFDNIDNLSPKASH--RNKQ----RHKQNVYSEYVLDSG 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 777 CFDDDDAPSSlaaaaaTGEPASPAALSLFLGSPFLQGQAlARTPPTRRGGKEAEKDTSGEAAVAAKAKA----------- 845
Cdd:pfam16629 74 RHDDSVCRSD------NFNTGNVTVLSPYLNTTVLPSSS-SRDSRGNAESSRSEKDRSLDRERGAGLSNfhpatensgns 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 846 ------KLALAVARIDQLVEDISALHTSSDDSFSLSSGDP---GQEAPREGRAQSCSPCRGPEG-GRREAGSRAHPLLRL 915
Cdd:pfam16629 147 skrigmQISTTAAQIAKVMEEVSSMHISQEDRSSGSTSDMhcmQDDRNSIRRSSTAHPHSNVYSfNKSESSNRPCPMPYM 226
|
250 260
....*....|....*....|....*....
gi 578832902 916 KAAHASLSNDSLNSGSASDGYCPREHMLP 944
Cdd:pfam16629 227 KMEYKRASNDSLNSVSSSDGYGKRGQMKP 255
|
|
| Suppressor_APC |
pfam11414 |
Adenomatous polyposis coli tumour suppressor protein; The tumour suppressor protein, APC, has ... |
124-205 |
2.51e-20 |
|
Adenomatous polyposis coli tumour suppressor protein; The tumour suppressor protein, APC, has a nuclear export activity as well as many different intracellular functions. The structure consists of three alpha-helices forming two separate antiparallel coiled coils.
Pssm-ID: 463275 Cd Length: 82 Bit Score: 87.31 E-value: 2.51e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 124 SRATIRLLEELDRERCFLLNEIEKEEKEKLWYYSQLQGLSKRLDELPHVETQFSMQMDLIRQQLEFEAQHIRSLMEERFG 203
Cdd:pfam11414 1 DYNMLKRMKQLEQEKDVLLQGLEMVERARDWYQQQLQEVQERQKYLGANGTYFDYGSDAQQERLEFLLARIQEVNRCLGG 80
|
..
gi 578832902 204 TS 205
Cdd:pfam11414 81 LI 82
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1566-2098 |
2.16e-13 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 76.52 E-value: 2.16e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1566 PSLIADETPPCYSLSSSASSLSEPEPSEPpAVHPRGREPAVTKDPG----PGGGRDSSPSPRAAEELlqrciSSALPRRR 1641
Cdd:PHA03247 2552 PPPLPPAAPPAAPDRSVPPPRPAPRPSEP-AVTSRARRPDAPPQSArpraPVDDRGDPRGPAPPSPL-----PPDTHAPD 2625
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1642 PPVSGlRRRKPRATRLDERPAEGSRERGEEAAGSDRASdldsvewraiqegansivtwLHQAAAATREASSESdsilsfv 1721
Cdd:PHA03247 2626 PPPPS-PSPAANEPDPHPPPTVPPPERPRDDPAPGRVS--------------------RPRRARRLGRAAQAS------- 2677
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1722 sglsvgSTLQPPKHRKGRQAEGEMGSARRPEKrgaasvktsgSPRSPAGPEKPRGTQKTTPGVPAVLRGRTVIYVPSPAP 1801
Cdd:PHA03247 2678 ------SPPQRPRRRAARPTVGSLTSLADPPP----------PPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAP 2741
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1802 RAQPKGTPGPRATPRKVAPPCLAQPAAPAKVPSPGQQRSRSLHRPAKTSELATLSQPPrSATPPARLAKTPSSSSSQTSP 1881
Cdd:PHA03247 2742 PAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLP-SPWDPADPPAAVLAPAAALPP 2820
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1882 ASQPLPRKRPPVTQAAGALPGPGASPVPKTPARTLLAKQHKTQRSPVRIPFMQRPARRGPPPlARAVPEPGPRGRAGTEA 1961
Cdd:PHA03247 2821 AASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPP-VRRLARPAVSRSTESFA 2899
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1962 GPGARGGRLGLVRVASALSSGSESSDRSGFRRQLtfikESPGLRRRRSELSSAESAASAPQGASPrrgRPALPAVFLCSS 2041
Cdd:PHA03247 2900 LPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPP----PPPPRPQPPLAPTTDPAGAGEPSGAVP---QPWLGALVPGRV 2972
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*..
gi 578832902 2042 RCEELRAAPrqgPAPARQRPPAARPSPGERPARRTTSESPSRLPVRAPAARPETVKR 2098
Cdd:PHA03247 2973 AVPRFRVPQ---PAPSREAPASSTPPLTGHSLSRVSSWASSLALHEETDPPPVSLKQ 3026
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1315-1911 |
5.78e-08 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 58.80 E-value: 5.78e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1315 FAGHRRREEGP--APTGSRPRG-AADQELELLRECLGAavPARLRKVASALVPGRRALPVPV---YMLVPAPAPAQEDDS 1388
Cdd:PHA03247 2425 FVGSEEIEELPfvSPGGDVLAGlAADGDPFFARTILGA--PFSLSLLLGELFPGAPVYRRPAearFPFAAGAAPDPGGGG 2502
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1389 CTDSAEGTPVNFSSAASLSDETLQGP--PR-------------DQPGGPAGRQRPTGRPTSARQAMGHRHKAGGAGRSAE 1453
Cdd:PHA03247 2503 PPDPDAPPAPSRLAPAILPDEPVGEPvhPRmltwirgleelasDDAGDPPPPLPPAAPPAAPDRSVPPPRPAPRPSEPAV 2582
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1454 QSRGAgknraglelplgRPPSAPADKDGSKPGRTRGDGALQSLCLTTPTEEAVY-------CFYGNDSDEEPPAAAPTPT 1526
Cdd:PHA03247 2583 TSRAR------------RPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPdppppspSPAANEPDPHPPPTVPPPE 2650
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1527 HRRTSAIPRAFTRERPQGRKEAPAPSKAAPAAPPPARTQPSL-----IADETPPCYSLSSSASSLSEPEPSEPPAVHPRG 1601
Cdd:PHA03247 2651 RPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVgsltsLADPPPPPPTPEPAPHALVSATPLPPGPAAARQ 2730
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1602 REPAVTKDPGPGGGRDSSPSPRAAEELLQRCISSALPRRRPPVSGLRRRKPRATrldeRPAEGSRERGEEAAGSDRasdl 1681
Cdd:PHA03247 2731 ASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLT----RPAVASLSESRESLPSPW---- 2802
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1682 DSVEWRAIQEGANSIVTWLHQAAAATREASSESDSILSFVSGlsvgsTLQPPKHRKGRQAEGEmGSARRPEKRGAASVkt 1761
Cdd:PHA03247 2803 DPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPG-----PPPPSLPLGGSVAPGG-DVRRRPPSRSPAAK-- 2874
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1762 sgsprsPAGPEKPRGTQKTTPGVPavlrgrtviyvPSPAPRAQPKGTPGPRATPRKVAPPCLAQPAAPAKVPSPG-QQRS 1840
Cdd:PHA03247 2875 ------PAAPARPPVRRLARPAVS-----------RSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPpPPPP 2937
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 578832902 1841 RSLHRPAKTSELATLSQPPRSATPPARLAktpsssssqTSPASQPLPRKRPPvtQAAGALPGPGASPVPKT 1911
Cdd:PHA03247 2938 RPQPPLAPTTDPAGAGEPSGAVPQPWLGA---------LVPGRVAVPRFRVP--QPAPSREAPASSTPPLT 2997
|
|
| Arm |
pfam00514 |
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ... |
615-654 |
1.18e-06 |
|
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.
Pssm-ID: 425727 [Multi-domain] Cd Length: 41 Bit Score: 47.06 E-value: 1.18e-06
10 20 30 40
....*....|....*....|....*....|....*....|
gi 578832902 615 EDYRQVLRDHNCLQTLLQHLTSHSLTIVSNACGTLWNLSA 654
Cdd:pfam00514 2 PENKQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLAA 41
|
|
| ARM |
smart00185 |
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ... |
614-654 |
1.76e-06 |
|
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.
Pssm-ID: 214547 [Multi-domain] Cd Length: 41 Bit Score: 46.27 E-value: 1.76e-06
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 578832902 614 REDYRQVLRDHNCLQTLLQHLTSHSLTIVSNACGTLWNLSA 654
Cdd:smart00185 1 DDENKQAVVDAGGLPALVELLKSEDEEVVKEAAWALSNLSS 41
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
2002-2227 |
4.56e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 49.17 E-value: 4.56e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 2002 PGLRRRRSELSSAESAASAPQGASPRRGRPALPAVFLCSSRCEELRAAPRQGPAPARQRPPAARPSP----GERPARRTT 2077
Cdd:PHA03247 258 PPVVGEGADRAPETARGATGPPPPPEAAAPNGAAAPPDGVWGAALAGAPLALPAPPDPPPPAPAGDAeeedDEDGAMEVV 337
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 2078 SESP---SRLPVRAPAARPETVKRYASLPHISVARRPDGAVPAAPASADAAR-------RSSDGEPRPLPRVAAPGTTwr 2147
Cdd:PHA03247 338 SPLPrprQHYPLGFPKRRRPTWTPPSSLEDLSAGRHHPKRASLPTRKRRSARhaatpfaRGPGGDDQTRPAAPVPASV-- 415
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 2148 riRDEDVPHILRSTLPATALPLRGSTPeDAPAGPPPRKTSDAVVQTEEVAAPKTNSSTSPSLET---REPPGAPAGGQLS 2224
Cdd:PHA03247 416 --PTPAPTPVPASAPPPPATPLPSAEP-GSDDGPAPPPERQPPAPATEPAPDDPDDATRKALDAlreRRPPEPPGADLAE 492
|
...
gi 578832902 2225 LLG 2227
Cdd:PHA03247 493 LLG 495
|
|
| SAMP |
pfam05924 |
SAMP Motif; This short region is found repeated in the mid region of the adenomatous polyposis ... |
1621-1642 |
1.77e-03 |
|
SAMP Motif; This short region is found repeated in the mid region of the adenomatous polyposis proteins (APCs). This motif binds axin.
Pssm-ID: 461782 Cd Length: 22 Bit Score: 37.57 E-value: 1.77e-03
|
| APC_r |
pfam05923 |
APC repeat; This short region is found repeated in the mid region of the adenomatous polyposis ... |
1260-1281 |
2.33e-03 |
|
APC repeat; This short region is found repeated in the mid region of the adenomatous polyposis proteins (APCs). In the human protein many cancer-linked SNPs are found near the first three occurrences of the motif. These repeats bind beta-catenin.
Pssm-ID: 461781 Cd Length: 24 Bit Score: 37.36 E-value: 2.33e-03
|
| Arm |
pfam00514 |
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ... |
525-562 |
9.38e-03 |
|
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.
Pssm-ID: 425727 [Multi-domain] Cd Length: 41 Bit Score: 35.89 E-value: 9.38e-03
10 20 30
....*....|....*....|....*....|....*...
gi 578832902 525 KKVLREAGSVTALVQCvLRATKESTLKSVLSALWNLSA 562
Cdd:pfam00514 5 KQAVIEAGAVPPLVRL-LSSPDEEVQEEAAWALSNLAA 41
|
|
| Arm |
pfam00514 |
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ... |
661-696 |
9.76e-03 |
|
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.
Pssm-ID: 425727 [Multi-domain] Cd Length: 41 Bit Score: 35.89 E-value: 9.76e-03
10 20 30
....*....|....*....|....*....|....*.
gi 578832902 661 ELLWDLGAVGMLRNLVHSKHKMIAMGSAAALRNLLA 696
Cdd:pfam00514 6 QAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLAA 41
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| APC_basic |
pfam05956 |
APC basic domain; This region of the APC family of proteins is known as the basic domain. It ... |
1786-2113 |
5.50e-94 |
|
APC basic domain; This region of the APC family of proteins is known as the basic domain. It contains a high proportion of positively charged amino acids and interacts with microtubules.
Pssm-ID: 428690 [Multi-domain] Cd Length: 336 Bit Score: 308.34 E-value: 5.50e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1786 AVLRGRTVIYVPSpAPRAQPKGTPGPRATPRKVAppclaqpaAPAKVPSPGQQRSRSLHRPAKTSELATLSQPPRSATPP 1865
Cdd:pfam05956 1 VVFRGRTVIYMPG-VKESQPSTSPPPKKTPPKTD--------APAKNPNLGQQRSRSLHRLGKPSELADLSPPKRSATPP 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1866 ARLAKTPSSSSSQTSPASQPLPRKRPPVTQAAGALPGPGAS------PVPKTPARTLLAKQ--HKTQRSPVRIPFMQRPA 1937
Cdd:pfam05956 72 ARISKAPSSGSSRDSTPSRPPQKKLTSPSQSPGRLPGSGGRnklsplPKTKSPARASTKKSgsHKTQKSPVRIPFMQTPT 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1938 R-----RGPPPLARAVPEPgpRGRAGTEAGPGARGGRLGLVRVASALSSGSESSDRsGFRRQLTFIKESPG-LRRRRSEL 2011
Cdd:pfam05956 152 KqtglpRNPSPLVTNQPEP--RSESASKGLRSLPGKRLDLVRMSSARSSGSESDRS-GFLRQLTFIKESPSlLLRRRLEL 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 2012 SSAESAASAPQGASPRRGRPALPAVFLCSSRCEELRAAPRQGPAPARQRPPAARPSPGERPARRTTSESPSRLPVRAPAA 2091
Cdd:pfam05956 229 SASESLSPSSQPASPRRSRPGLPAVFLCSSRCQELKGWRKQPPNPNSRAEPSDRPLTRRRPPRRTSSESPSRLPVRNGTW 308
|
330 340
....*....|....*....|..
gi 578832902 2092 RPETVKRYASLPHISVARRPDG 2113
Cdd:pfam05956 309 KRETFKRYSSLPHINVWRRTGS 330
|
|
| APC_rep |
pfam18797 |
Adenomatous polyposis coli (APC) repeat; Adenomatous polyposis coli contains an armadillo ... |
357-431 |
2.81e-33 |
|
Adenomatous polyposis coli (APC) repeat; Adenomatous polyposis coli contains an armadillo repeat and uses its highly conserved surface groove to recognize the APC-binding region (ABR) of Asef. This entry represents a single repeat unit of the Armadillo region.
Pssm-ID: 465870 Cd Length: 74 Bit Score: 123.81 E-value: 2.81e-33
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 578832902 357 SQPDQGLARKEMRVLHVLEQIRAYCETCWDWLQARDGGPEGGGAGSaPIPIEPQICQATCAVMKLSFDEEYRRAM 431
Cdd:pfam18797 1 SQPDDKRGRREMRVLHLLEQIRAYCETCWDWQESHSRGPEGDSNPM-PSPIEHQICPAICALMKLSFDEEHRHAM 74
|
|
| APC_N_CC |
pfam16689 |
Coiled-coil N-terminus of APC, dimerization domain; APC_N_CC is the N-terminal, coiled-coil ... |
6-57 |
8.17e-26 |
|
Coiled-coil N-terminus of APC, dimerization domain; APC_N_CC is the N-terminal, coiled-coil dimerization domain of the adenomatosis polyposis coli (APC) tumour-repressor proteins. It plays a key role in the regulation of cellular levels of the oncogene product beta-catenin. Coiled-coil regions are binding repeats that in this case bind to the armadillo repeat region of beta-catenin.
Pssm-ID: 435517 Cd Length: 52 Bit Score: 101.60 E-value: 8.17e-26
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 578832902 6 APYEQLVRQVEALKAENSHLRQELRDNSSHLSKLETETSGMKEVLKHLQGKL 57
Cdd:pfam16689 1 ASYDQLLRQVEALKLENTTLRQELRDNSSHLSKLETEASNMKEVLKHLQGSI 52
|
|
| Arm_APC_u3 |
pfam16629 |
Armadillo-associated region on APC; Arm_APC_u3 is a semi-unstructured region lying immediately ... |
697-944 |
2.01e-20 |
|
Armadillo-associated region on APC; Arm_APC_u3 is a semi-unstructured region lying immediately downstream of the armadillo fold before the beta-catenin binding motifs, APC_crr, pfam05923, on APC or adenomatous polyposis coli proteins in higher eukaryotes. The function is not known.
Pssm-ID: 435476 Cd Length: 293 Bit Score: 94.27 E-value: 2.01e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 697 HRPAKHQAAaTAVSPGSCVPSLYVRKQRALEAELDARHLAQALEHLEKQGPPAAEaaTKKPlpplRHLDGLAQDYASDSG 776
Cdd:pfam16629 1 NRPAKYKDA-NIMSPGSSLPSLHVRKQKALEAELDAQHLSETFDNIDNLSPKASH--RNKQ----RHKQNVYSEYVLDSG 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 777 CFDDDDAPSSlaaaaaTGEPASPAALSLFLGSPFLQGQAlARTPPTRRGGKEAEKDTSGEAAVAAKAKA----------- 845
Cdd:pfam16629 74 RHDDSVCRSD------NFNTGNVTVLSPYLNTTVLPSSS-SRDSRGNAESSRSEKDRSLDRERGAGLSNfhpatensgns 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 846 ------KLALAVARIDQLVEDISALHTSSDDSFSLSSGDP---GQEAPREGRAQSCSPCRGPEG-GRREAGSRAHPLLRL 915
Cdd:pfam16629 147 skrigmQISTTAAQIAKVMEEVSSMHISQEDRSSGSTSDMhcmQDDRNSIRRSSTAHPHSNVYSfNKSESSNRPCPMPYM 226
|
250 260
....*....|....*....|....*....
gi 578832902 916 KAAHASLSNDSLNSGSASDGYCPREHMLP 944
Cdd:pfam16629 227 KMEYKRASNDSLNSVSSSDGYGKRGQMKP 255
|
|
| Suppressor_APC |
pfam11414 |
Adenomatous polyposis coli tumour suppressor protein; The tumour suppressor protein, APC, has ... |
124-205 |
2.51e-20 |
|
Adenomatous polyposis coli tumour suppressor protein; The tumour suppressor protein, APC, has a nuclear export activity as well as many different intracellular functions. The structure consists of three alpha-helices forming two separate antiparallel coiled coils.
Pssm-ID: 463275 Cd Length: 82 Bit Score: 87.31 E-value: 2.51e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 124 SRATIRLLEELDRERCFLLNEIEKEEKEKLWYYSQLQGLSKRLDELPHVETQFSMQMDLIRQQLEFEAQHIRSLMEERFG 203
Cdd:pfam11414 1 DYNMLKRMKQLEQEKDVLLQGLEMVERARDWYQQQLQEVQERQKYLGANGTYFDYGSDAQQERLEFLLARIQEVNRCLGG 80
|
..
gi 578832902 204 TS 205
Cdd:pfam11414 81 LI 82
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1566-2098 |
2.16e-13 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 76.52 E-value: 2.16e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1566 PSLIADETPPCYSLSSSASSLSEPEPSEPpAVHPRGREPAVTKDPG----PGGGRDSSPSPRAAEELlqrciSSALPRRR 1641
Cdd:PHA03247 2552 PPPLPPAAPPAAPDRSVPPPRPAPRPSEP-AVTSRARRPDAPPQSArpraPVDDRGDPRGPAPPSPL-----PPDTHAPD 2625
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1642 PPVSGlRRRKPRATRLDERPAEGSRERGEEAAGSDRASdldsvewraiqegansivtwLHQAAAATREASSESdsilsfv 1721
Cdd:PHA03247 2626 PPPPS-PSPAANEPDPHPPPTVPPPERPRDDPAPGRVS--------------------RPRRARRLGRAAQAS------- 2677
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1722 sglsvgSTLQPPKHRKGRQAEGEMGSARRPEKrgaasvktsgSPRSPAGPEKPRGTQKTTPGVPAVLRGRTVIYVPSPAP 1801
Cdd:PHA03247 2678 ------SPPQRPRRRAARPTVGSLTSLADPPP----------PPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAP 2741
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1802 RAQPKGTPGPRATPRKVAPPCLAQPAAPAKVPSPGQQRSRSLHRPAKTSELATLSQPPrSATPPARLAKTPSSSSSQTSP 1881
Cdd:PHA03247 2742 PAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLP-SPWDPADPPAAVLAPAAALPP 2820
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1882 ASQPLPRKRPPVTQAAGALPGPGASPVPKTPARTLLAKQHKTQRSPVRIPFMQRPARRGPPPlARAVPEPGPRGRAGTEA 1961
Cdd:PHA03247 2821 AASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPP-VRRLARPAVSRSTESFA 2899
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1962 GPGARGGRLGLVRVASALSSGSESSDRSGFRRQLtfikESPGLRRRRSELSSAESAASAPQGASPrrgRPALPAVFLCSS 2041
Cdd:PHA03247 2900 LPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPP----PPPPRPQPPLAPTTDPAGAGEPSGAVP---QPWLGALVPGRV 2972
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*..
gi 578832902 2042 RCEELRAAPrqgPAPARQRPPAARPSPGERPARRTTSESPSRLPVRAPAARPETVKR 2098
Cdd:PHA03247 2973 AVPRFRVPQ---PAPSREAPASSTPPLTGHSLSRVSSWASSLALHEETDPPPVSLKQ 3026
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1732-2245 |
1.09e-12 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 74.20 E-value: 1.09e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1732 PPKHRKGRQAEGEMGSARRPEKRGAASVKTSgSPRSPAGPEKPRGTQKTTPGVPAVLRGRTVIYVPSPAPRAQPKGT--- 1808
Cdd:PHA03247 2592 PPQSARPRAPVDDRGDPRGPAPPSPLPPDTH-APDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRArrl 2670
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1809 ---PGPRATPRKVAPPCLAQPAAP----AKVPSPGQQRSRSLHRPAKTSELATLSQPPRSATPPARLAKTPSSSSSQTSP 1881
Cdd:PHA03247 2671 graAQASSPPQRPRRRAARPTVGSltslADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPAT 2750
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1882 ASQPLPRKRPPVTQAAGAlPGPGASPVPKTPARTLLAKQHKTQRSPVRIPFMQRPARRGPPPLARAVPEPGPRGRAGTEA 1961
Cdd:PHA03247 2751 PGGPARPARPPTTAGPPA-PAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLP 2829
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1962 GPGArggrlglvrvASALSSGSESSDRSGFRRQLTFIKESPGLRRRRSELSSAESAASAPQGASPRRGRPALPavflcss 2041
Cdd:PHA03247 2830 PPTS----------AQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVS------- 2892
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 2042 RCEELRAAPRQGPAPARQRPPAARPSPGERPARRTTSESPSRLPVRAPA-ARPETVKRYASLPHISVARRPDGAVPAAPA 2120
Cdd:PHA03247 2893 RSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPpLAPTTDPAGAGEPSGAVPQPWLGALVPGRV 2972
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 2121 SADAARRSSDGEPRPLPrvAAPGTTWRRIRDEDVP--------HILRSTLPATALPLRGSTPEDAPAGPPPRKTSDAVVQ 2192
Cdd:PHA03247 2973 AVPRFRVPQPAPSREAP--ASSTPPLTGHSLSRVSswasslalHEETDPPPVSLKQTLWPPDDTEDSDADSLFDSDSERS 3050
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*
gi 578832902 2193 TEEVAAPKTNSSTSPSleTREP-PGAPAGGQLSLLGSDVDGPSL-AKAPISAPFV 2245
Cdd:PHA03247 3051 DLEALDPLPPEPHDPF--AHEPdPATPEAGARESPSSQFGPPPLsANAALSRRYV 3103
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1315-1911 |
5.78e-08 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 58.80 E-value: 5.78e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1315 FAGHRRREEGP--APTGSRPRG-AADQELELLRECLGAavPARLRKVASALVPGRRALPVPV---YMLVPAPAPAQEDDS 1388
Cdd:PHA03247 2425 FVGSEEIEELPfvSPGGDVLAGlAADGDPFFARTILGA--PFSLSLLLGELFPGAPVYRRPAearFPFAAGAAPDPGGGG 2502
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1389 CTDSAEGTPVNFSSAASLSDETLQGP--PR-------------DQPGGPAGRQRPTGRPTSARQAMGHRHKAGGAGRSAE 1453
Cdd:PHA03247 2503 PPDPDAPPAPSRLAPAILPDEPVGEPvhPRmltwirgleelasDDAGDPPPPLPPAAPPAAPDRSVPPPRPAPRPSEPAV 2582
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1454 QSRGAgknraglelplgRPPSAPADKDGSKPGRTRGDGALQSLCLTTPTEEAVY-------CFYGNDSDEEPPAAAPTPT 1526
Cdd:PHA03247 2583 TSRAR------------RPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPdppppspSPAANEPDPHPPPTVPPPE 2650
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1527 HRRTSAIPRAFTRERPQGRKEAPAPSKAAPAAPPPARTQPSL-----IADETPPCYSLSSSASSLSEPEPSEPPAVHPRG 1601
Cdd:PHA03247 2651 RPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVgsltsLADPPPPPPTPEPAPHALVSATPLPPGPAAARQ 2730
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1602 REPAVTKDPGPGGGRDSSPSPRAAEELLQRCISSALPRRRPPVSGLRRRKPRATrldeRPAEGSRERGEEAAGSDRasdl 1681
Cdd:PHA03247 2731 ASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLT----RPAVASLSESRESLPSPW---- 2802
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1682 DSVEWRAIQEGANSIVTWLHQAAAATREASSESDSILSFVSGlsvgsTLQPPKHRKGRQAEGEmGSARRPEKRGAASVkt 1761
Cdd:PHA03247 2803 DPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPG-----PPPPSLPLGGSVAPGG-DVRRRPPSRSPAAK-- 2874
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1762 sgsprsPAGPEKPRGTQKTTPGVPavlrgrtviyvPSPAPRAQPKGTPGPRATPRKVAPPCLAQPAAPAKVPSPG-QQRS 1840
Cdd:PHA03247 2875 ------PAAPARPPVRRLARPAVS-----------RSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPpPPPP 2937
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 578832902 1841 RSLHRPAKTSELATLSQPPRSATPPARLAktpsssssqTSPASQPLPRKRPPvtQAAGALPGPGASPVPKT 1911
Cdd:PHA03247 2938 RPQPPLAPTTDPAGAGEPSGAVPQPWLGA---------LVPGRVAVPRFRVP--QPAPSREAPASSTPPLT 2997
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1791-2279 |
8.34e-07 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 54.94 E-value: 8.34e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1791 RTVIYVPSPAPRAQPKGTPGPRATPRkvaPPCLAQPAAPAKVPSPGQQRSRSLHRPAKTSELATL---SQPPRSATPPAR 1867
Cdd:PHA03247 2457 RTILGAPFSLSLLLGELFPGAPVYRR---PAEARFPFAAGAAPDPGGGGPPDPDAPPAPSRLAPAilpDEPVGEPVHPRM 2533
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1868 LAKTPSSSSSQTSPASQPLPRKRPPVTQAAG--ALPGPGASPVPKTPARTLLAK------QHKTQRSPV--RIPFMQRPA 1937
Cdd:PHA03247 2534 LTWIRGLEELASDDAGDPPPPLPPAAPPAAPdrSVPPPRPAPRPSEPAVTSRARrpdappQSARPRAPVddRGDPRGPAP 2613
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1938 RRGPPPLARAVPEPGPRGR-AGTEAGPGARGGRLGLVRVASALSSGSESSDRSGFRRQLTFIKESPGLRRRRSELSSAES 2016
Cdd:PHA03247 2614 PSPLPPDTHAPDPPPPSPSpAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVG 2693
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 2017 AASAPQGASPRRGRPALPAVFLCSSRCEELRAAPRQGPAPARQRPPAARPSP---------GERPARRTTSESPSRLPVR 2087
Cdd:PHA03247 2694 SLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPagpatpggpARPARPPTTAGPPAPAPPA 2773
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 2088 APAA-------RPETVKRYASLPHISVARRP-DGAVPAAPASADAARRSSDGEPRPLPRVAAPgttwrrirdedVPHILR 2159
Cdd:PHA03247 2774 APAAgpprrltRPAVASLSESRESLPSPWDPaDPPAAVLAPAAALPPAASPAGPLPPPTSAQP-----------TAPPPP 2842
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 2160 STLPATALPLRGS-----------------TPEDAPAGPPPRKTSDAVV--QTEEVAAPKTNSSTSPSLETREPPGAPAG 2220
Cdd:PHA03247 2843 PGPPPPSLPLGGSvapggdvrrrppsrspaAKPAAPARPPVRRLARPAVsrSTESFALPPDQPERPPQPQAPPPPQPQPQ 2922
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 2221 GQLSLLGSDV-DGPSLAKAPISAPFVHEGLGVAVGGFPASRHGSPSRSARVPPFNYVPSP 2279
Cdd:PHA03247 2923 PPPPPQPQPPpPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQP 2982
|
|
| Arm |
pfam00514 |
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ... |
615-654 |
1.18e-06 |
|
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.
Pssm-ID: 425727 [Multi-domain] Cd Length: 41 Bit Score: 47.06 E-value: 1.18e-06
10 20 30 40
....*....|....*....|....*....|....*....|
gi 578832902 615 EDYRQVLRDHNCLQTLLQHLTSHSLTIVSNACGTLWNLSA 654
Cdd:pfam00514 2 PENKQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLAA 41
|
|
| ARM |
smart00185 |
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ... |
614-654 |
1.76e-06 |
|
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.
Pssm-ID: 214547 [Multi-domain] Cd Length: 41 Bit Score: 46.27 E-value: 1.76e-06
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 578832902 614 REDYRQVLRDHNCLQTLLQHLTSHSLTIVSNACGTLWNLSA 654
Cdd:smart00185 1 DDENKQAVVDAGGLPALVELLKSEDEEVVKEAAWALSNLSS 41
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1588-1962 |
5.93e-06 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 52.10 E-value: 5.93e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1588 EPEPSEPPAVHPRGREPA-VTKDPGPGGGRDSSPSPRAAEELLQRCISSALPRRRPPvsgLRRRKPRATRLDERPAEGSR 1666
Cdd:PHA03307 81 ANESRSTPTWSLSTLAPAsPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEM---LRPVGSPGPPPAASPPAAGA 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1667 ERGEEAAGSDRASDLDSvewraiqegansivtwlhqAAAATREASSESDSILSFVSGLSVGSTLQPPKHRKGR-----QA 1741
Cdd:PHA03307 158 SPAAVASDAASSRQAAL-------------------PLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSpisasAS 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1742 EGEMGSARRPEKRGAASVKTSGSPRSPAGPEKPRGTQKTTPGVPAVLRGRTVIYVPSPAPRAQPKGTPGPRATPRKVAPP 1821
Cdd:PHA03307 219 SPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSP 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1822 CLAQPAAPAKVPSPGQQRSRSLHRPAKTSELATLSQPPRS-ATPPARLAKTPSSSSSQTSPASQPLPRKRPPVTQAAGAL 1900
Cdd:PHA03307 299 SPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGaAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSP 378
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 578832902 1901 PGPGASPVPKTPARTLLAKQHKTQRSPvriPFMQRPARRGPPPLARAVPEPGPRGRAGTEAG 1962
Cdd:PHA03307 379 AASAGRPTRRRARAAVAGRARRRDATG---RFPAGRPRPSPLDAGAASGAFYARYPLLTPSG 437
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
1856-2219 |
1.98e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 49.98 E-value: 1.98e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1856 SQPPRSATPPARLAKTPSSSSSQTSPASQPLPRKRP-PVTQAAGALPGPGASPVPKTPARTLLAKQHKTQRSPVRIPFMQ 1934
Cdd:PRK07764 396 AAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPaPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPE 475
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1935 RPARRGPPPLARAVPEPGPRGRAGTEAGPGARGGR---------LGLV--RVASALSSGSESSDRSGFRRQ-LTFIKESP 2002
Cdd:PRK07764 476 PTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAAtlrerwpeiLAAVpkRSRKTWAILLPEATVLGVRGDtLVLGFSTG 555
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 2003 GLRRR--------------RSELSSAESAASAPQGASPRRGRPALPAVFLCSSRCEELR-AAPRQGPAPARQRPPAARPS 2067
Cdd:PRK07764 556 GLARRfaspgnaevlvtalAEELGGDWQVEAVVGPAPGAAGGEGPPAPASSGPPEEAARpAAPAAPAAPAAPAPAGAAAA 635
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 2068 PGERPARRTTSESPSRLPVRAPAARPETVKRYASLPHISVARRPDGAVPAAPASADAARRSSDGEPRPLPRVAAPGTTWR 2147
Cdd:PRK07764 636 PAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQAD 715
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 578832902 2148 RIRDEDVPHILRSTLPATALPLRGSTPEDAPAGPPPRKTSDAVVQTEEVAAPKTNSSTSPSLETREPPGAPA 2219
Cdd:PRK07764 716 DPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAE 787
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
1560-1965 |
2.90e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 49.60 E-value: 2.90e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1560 PPARTQPSLIADETPPCYSLSSSASSLSEPEPSEPPAVHPRGREPAVTKDPGPGGGRDSSPSPRAAEEllqrcissalPR 1639
Cdd:PRK07764 398 APSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQ----------PA 467
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1640 RRPPVSGLRRRKPRATRLDERPAEGSRERGEEAAGSDRASDLDSVE--WRAIQE--GANSIVTWLHQAAAATREASSESD 1715
Cdd:PRK07764 468 PAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAATLRerWPEILAavPKRSRKTWAILLPEATVLGVRGDT 547
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1716 SILSFVSGLSVGSTLQPPKHRKGRQA-EGEMGSARRPEKRGAASVKTSGSPRSPAGPEKPRGTQKTTPGVPAvlrgrtvi 1794
Cdd:PRK07764 548 LVLGFSTGGLARRFASPGNAEVLVTAlAEELGGDWQVEAVVGPAPGAAGGEGPPAPASSGPPEEAARPAAPA-------- 619
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1795 yVPSPAPRAQPKGTPGPRATPRKVAPPCLAQPAAPAKVPSPGQQRSRSLHRPAKTSELATLSQPPRSATPPARLAKTPSS 1874
Cdd:PRK07764 620 -APAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAP 698
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1875 SSSQTSPASQPLPRKR-------PPVTQAAGALPGPGASPVPKTPARTLLAKQHKTQRSPvriPFMQRPARRGPPPLARA 1947
Cdd:PRK07764 699 AQPAPAPAATPPAGQAddpaaqpPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQP---PPPPAPAPAAAPAAAPP 775
|
410
....*....|....*...
gi 578832902 1948 VPEPGPRGRAGTEAGPGA 1965
Cdd:PRK07764 776 PSPPSEEEEMAEDDAPSM 793
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
1589-1966 |
3.24e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 49.21 E-value: 3.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1589 PEPSEPPAVHPRGREPAVTKDPGPGGGRDSSPSPRAAEELLQRCIS-------SALPRRRPPVSGLRRRKPRATRLDERP 1661
Cdd:PRK07764 410 PAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSpppaaapSAQPAPAPAAAPEPTAAPAPAPPAAPA 489
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1662 AEGSRERGEEAAGSDRASDLDSVE--WRAIQE--GANSIVTWLHQAAAATREASSESDSILSFVSGLSVGSTLQPPKHRK 1737
Cdd:PRK07764 490 PAAAPAAPAAPAAPAGADDAATLRerWPEILAavPKRSRKTWAILLPEATVLGVRGDTLVLGFSTGGLARRFASPGNAEV 569
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1738 GRQA-EGEMGSARRPEKRGAASVKTSGSPRSPAGPEKPRGTQKTTPGVPAVlrgrtviyvPSPAPRAQPKGTPGPRATPR 1816
Cdd:PRK07764 570 LVTAlAEELGGDWQVEAVVGPAPGAAGGEGPPAPASSGPPEEAARPAAPAA---------PAAPAAPAPAGAAAAPAEAS 640
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1817 KVAPPCLAQPAAPAKVPSPGQQRSRSLHRPAKTSELATLSQPPRSATPPARlaktpsssssqtspASQPLPRKRPPVTQA 1896
Cdd:PRK07764 641 AAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPA--------------APAGAAPAQPAPAPA 706
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1897 AGALPGPGASPVPKTPARTllakQHKTQRSPVRIPFMQRPARRGPPPLARAVPEPGPRGRAGTEAGPGAR 1966
Cdd:PRK07764 707 ATPPAGQADDPAAQPPQAA----QGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAA 772
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
1797-2219 |
3.47e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 49.21 E-value: 3.47e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1797 PSPAPRAQPKGTPGPRATPRKVAPPCLAQPAAPakvPSPGQQRSRSLHRPAKTSELATLSQPPRSATP-PARLAKTPSSS 1875
Cdd:PRK07764 402 AAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPA---PAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPaPAPAAAPEPTA 478
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1876 SSQTSPASQPLPRKRPPVTQAAGALPGPGASPVPKTPARTLLAKQHKtqRSPVRIPFMQRPAR----RGP--------PP 1943
Cdd:PRK07764 479 APAPAPPAAPAPAAAPAAPAAPAAPAGADDAATLRERWPEILAAVPK--RSRKTWAILLPEATvlgvRGDtlvlgfstGG 556
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1944 LARAVPEPGprgraGTEAGPGARGGRLGlVRVASALSSGSESSDRSGFRRQLTFIKESPGLRRRRSELSSAESAASAPQG 2023
Cdd:PRK07764 557 LARRFASPG-----NAEVLVTALAEELG-GDWQVEAVVGPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPA 630
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 2024 ASPRRGRPALPavflcssrceelrAAPRQGPAPARQRPPAARPSPGERParrttSESPSRLPVRAPAARPETVkryASLP 2103
Cdd:PRK07764 631 GAAAAPAEASA-------------APAPGVAAPEHHPKHVAVPDASDGG-----DGWPAKAGGAAPAAPPPAP---APAA 689
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 2104 HISVARRPDGAVPAAPASADAARRSSDGEPRPlPRVAAPGTTWRRIRDEDVP-HILRSTLPATALPLRGSTPEDAPAGPP 2182
Cdd:PRK07764 690 PAAPAGAAPAQPAPAPAATPPAGQADDPAAQP-PQAAQGASAPSPAADDPVPlPPEPDDPPDPAGAPAQPPPPPAPAPAA 768
|
410 420 430
....*....|....*....|....*....|....*..
gi 578832902 2183 PRKTSDAVVQTEEVAAPKTNSSTSPSLETREPPGAPA 2219
Cdd:PRK07764 769 APAAAPPPSPPSEEEEMAEDDAPSMDDEDRRDAEEVA 805
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
2002-2227 |
4.56e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 49.17 E-value: 4.56e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 2002 PGLRRRRSELSSAESAASAPQGASPRRGRPALPAVFLCSSRCEELRAAPRQGPAPARQRPPAARPSP----GERPARRTT 2077
Cdd:PHA03247 258 PPVVGEGADRAPETARGATGPPPPPEAAAPNGAAAPPDGVWGAALAGAPLALPAPPDPPPPAPAGDAeeedDEDGAMEVV 337
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 2078 SESP---SRLPVRAPAARPETVKRYASLPHISVARRPDGAVPAAPASADAAR-------RSSDGEPRPLPRVAAPGTTwr 2147
Cdd:PHA03247 338 SPLPrprQHYPLGFPKRRRPTWTPPSSLEDLSAGRHHPKRASLPTRKRRSARhaatpfaRGPGGDDQTRPAAPVPASV-- 415
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 2148 riRDEDVPHILRSTLPATALPLRGSTPeDAPAGPPPRKTSDAVVQTEEVAAPKTNSSTSPSLET---REPPGAPAGGQLS 2224
Cdd:PHA03247 416 --PTPAPTPVPASAPPPPATPLPSAEP-GSDDGPAPPPERQPPAPATEPAPDDPDDATRKALDAlreRRPPEPPGADLAE 492
|
...
gi 578832902 2225 LLG 2227
Cdd:PHA03247 493 LLG 495
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1763-2220 |
4.59e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 49.01 E-value: 4.59e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1763 GSPRSPAGPEKPRGTQKTTPGVPAVLRGRTVIYVPSPAPRAQPKGTPGPRATPRKVAPPCLAQPAAPAKVPSPGQQRSRS 1842
Cdd:PHA03307 25 PATPGDAADDLLSGSQGQLVSDSAELAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREG 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1843 LHRPAKTSELATLSQPPRSATPPARLAKTPSSSSSQTSPASQPLPRKRPPVTQAAGALPGPGASPVPKTPArtllakqhk 1922
Cdd:PHA03307 105 SPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALP--------- 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1923 tqrspvrIPFMQRPARRGPPPLARAVPEPGPRGRAGTEAGPGArggrlgLVRVASALSSGSESSDRSGFRRQLTFIKESP 2002
Cdd:PHA03307 176 -------LSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSS------PISASASSPAPAPGRSAADDAGASSSDSSSS 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 2003 GLRRRRSELSSAESAASAPQGASPRRGRPALPAVflcSSRCEELRAAPRQGPAPARQRPPAARPSPGERPARRTTSESPS 2082
Cdd:PHA03307 243 ESSGCGWGPENECPLPRPAPITLPTRIWEASGWN---GPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSS 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 2083 RLP---VRAPAARPETVKRYASLPHISVARRPDGAVPAAPASADAARRSSDGEPRPLPRVAAPGTTWRRIRDEDVPHILR 2159
Cdd:PHA03307 320 SSRessSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGRAR 399
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 578832902 2160 stlpatalplRGSTPEDAPAGPPPRKTSDAvvqteevaapktnSSTSPSLETREPPGAPAG 2220
Cdd:PHA03307 400 ----------RRDATGRFPAGRPRPSPLDA-------------GAASGAFYARYPLLTPSG 437
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
1764-1971 |
5.57e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 48.33 E-value: 5.57e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1764 SPRSPAGPEKPRGTQKTTPGVPAVLRGRTVIYVPSPAPrAQPKGTPGPRATPRKVAPPCLAQPAAPAKVPSPGQQRSRSL 1843
Cdd:PRK12323 373 GPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAP-AAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPA 451
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1844 HRPAKTSELATLSQPPRSATPPArlAKTPSSSSSQTSPASQPLPRKRPPVTQAAGALPGPGASPVPKTPARTLLAkqhKT 1923
Cdd:PRK12323 452 PAPAAAPAAAARPAAAGPRPVAA--AAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAE---SI 526
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 578832902 1924 QRSPVRIPFMQRPARRGPPPLAravpePGPRGRAGTEAGPGARGGRLG 1971
Cdd:PRK12323 527 PDPATADPDDAFETLAPAPAAA-----PAPRAAAATEPVVAPRPPRAS 569
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2023-2300 |
7.06e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 48.06 E-value: 7.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 2023 GASPRRGRPALPAVflcSSRCEELRAAPRQGPAPARQRPPAARPSPGERPARRTTSESPSRLPVRAPAARPETVKRYASL 2102
Cdd:PRK07764 395 AAAAPSAAAAAPAA---APAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPA 471
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 2103 PHISVARRPDGAVPAAPASADAARRSSDGEPRPLPR-VAAPGTTWRRIRdEDVPHILRSTLP-----ATALPLRGST--- 2173
Cdd:PRK07764 472 AAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADdAATLRERWPEIL-AAVPKRSRKTWAillpeATVLGVRGDTlvl 550
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 2174 ---------------------------------------PEDAPAGPPPRKTSDAVVQTEEVAAPKTNSSTSPSLETREP 2214
Cdd:PRK07764 551 gfstgglarrfaspgnaevlvtalaeelggdwqveavvgPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPA 630
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 2215 PGAPAGGqlsllgsdvdGPSLAKAPISAPFVHEGLGVAVGGFPASRHGSPSRSARVPPFNYVPSPmvVAATTDSAAEKAP 2294
Cdd:PRK07764 631 GAAAAPA----------EASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAP--APAAPAAPAGAAP 698
|
....*.
gi 578832902 2295 ATASAT 2300
Cdd:PRK07764 699 AQPAPA 704
|
|
| PLN03237 |
PLN03237 |
DNA topoisomerase 2; Provisional |
1623-1866 |
1.96e-04 |
|
DNA topoisomerase 2; Provisional
Pssm-ID: 215641 [Multi-domain] Cd Length: 1465 Bit Score: 46.78 E-value: 1.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1623 RAAEELLQRCISSALPRRRPPVSGLRRRKPRATRLDERPAEGSRERGEEAAGSDRASDLDSVEWRAIQEGANSivtwlHQ 1702
Cdd:PLN03237 1174 KAEEAREKLQRAAARGESGAAKKVSRQAPKKPAPKKTTKKASESETTEETYGSSAMETENVAEVVKPKGRAGA-----KK 1248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1703 AAAATREASSESDSILSFvsglsvgstlqppkhrKGRQAEGEMGSArrPEKRGAasvKTSGSPRSPAGPEKPRGTQKTTP 1782
Cdd:PLN03237 1249 KAPAAAKEKEEEDEILDL----------------KDRLAAYNLDSA--PAQSAK---MEETVKAVPARRAAARKKPLASV 1307
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1783 GVPAVLRGRTVIYVP--SPAPRAQPKGTPGPRATPRKVA-PPCLAQPAAPAKVPSPGQQRSRSLhRPAKTSELATLSQPP 1859
Cdd:PLN03237 1308 SVISDSDDDDDDFAVevSLAERLKKKGGRKPAAANKKAAkPPAAAKKRGPATVQSGQKLLTEML-KPAEAIGISPEKKVR 1386
|
....*..
gi 578832902 1860 RSATPPA 1866
Cdd:PLN03237 1387 KMRASPF 1393
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1514-1912 |
3.30e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 46.32 E-value: 3.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1514 SDEEPPAAAPTPTHRRTSAIPRAFTRERPQGRKEAPAPSKAAPAAPPPARTQPSLIADETPPCYSLSSSASSLSEPEPSE 1593
Cdd:PHA03307 62 CDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPV 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1594 PPAVHPRGREPAVTKDPGPGGGRDSSPSPRAAeellqRCISSALPRRRPPVSGLRRRKPRATRLDERPAEGSRERGEEAA 1673
Cdd:PHA03307 142 GSPGPPPAASPPAAGASPAAVASDAASSRQAA-----LPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISAS 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1674 GSDRASDLDSvewraiqegansivtwlHQAAAATREASSESDSILSFVSGLSVGSTLQP---PKHRKGRQAEGEMGSARR 1750
Cdd:PHA03307 217 ASSPAPAPGR-----------------SAADDAGASSSDSSSSESSGCGWGPENECPLPrpaPITLPTRIWEASGWNGPS 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1751 PEKRGAASVKTSGSPRSPAGPEKPRGTQKTTPGVPAVLRGR-TVIYVPSPAPRAQPKGTPGPRATPRKVAPPCLAQPAAP 1829
Cdd:PHA03307 280 SRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSsRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPP 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1830 AKVPSPgqQRSRSLHRPAKTSelatlSQPPRSATPPARLAKTPSSSSSQTSPASQPLPRKRPPVTQAAGALPGPGASPVP 1909
Cdd:PHA03307 360 ADPSSP--RKRPRPSRAPSSP-----AASAGRPTRRRARAAVAGRARRRDATGRFPAGRPRPSPLDAGAASGAFYARYPL 432
|
...
gi 578832902 1910 KTP 1912
Cdd:PHA03307 433 LTP 435
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1745-2109 |
4.77e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 45.55 E-value: 4.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1745 MGSARRPEKRGAASVKTSGSPRSPAGPEKPRGTQKTTPGVPAVLrgrtviyvPSPAPRAQPKGTPGPRATPRKVAPPCLA 1824
Cdd:PHA03307 55 VVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPA--------SPAREGSPTPPGPSSPDPPPPTPPPASP 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1825 QPAAPAKVPSPgQQRSRSLHRPAKTSELATLSQPPRSATPPARlAKTPSSSSSQTSPASQPLPRKRPPVTQAAGALPGPG 1904
Cdd:PHA03307 127 PPSPAPDLSEM-LRPVGSPGPPPAASPPAAGASPAAVASDAAS-SRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASP 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1905 ASPVPKTPARTllakqhkTQRSPVRIPFMQRPARRGPPPLARAVPEPGPRGRAGTEAGPGARGGRLGLVRVASALSSGSE 1984
Cdd:PHA03307 205 RPPRRSSPISA-------SASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNG 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1985 SSDRSGFRRQLTfikeSPGLRRRRSELSSAESAASAPQGASPRRGRPALPAVFLCSSRCEELRAAPRQGPAPARQRPPA- 2063
Cdd:PHA03307 278 PSSRPGPASSSS----SPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSp 353
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 578832902 2064 ARPSPGERPARRTTSESPSRLPV--RAPAARPETVKRYASLPHISVAR 2109
Cdd:PHA03307 354 SRPPPPADPSSPRKRPRPSRAPSspAASAGRPTRRRARAAVAGRARRR 401
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
1517-1919 |
5.16e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 45.36 E-value: 5.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1517 EPPAAAPTPTHRRTSAIPRAFTRERPQGRKEAPAPSKAAPAAPPPARTQPsliADETPPCYSLSSSASSLSEPEPSEPPA 1596
Cdd:PRK07764 410 PAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPA---AAPSAQPAPAPAAAPEPTAAPAPAPPA 486
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1597 VHPRGREPAVTKDPGPGGGRDSSPSPRAA-EELLQrcissALPRRRPPVSGLRRRKPRATRLDER------PAEGSRERg 1669
Cdd:PRK07764 487 APAPAAAPAAPAAPAAPAGADDAATLRERwPEILA-----AVPKRSRKTWAILLPEATVLGVRGDtlvlgfSTGGLARR- 560
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1670 eeAAGSDRASDLDSV-------EWRAIQEGANSivtwlhqAAAATREASSESDSILSFVSGL---SVGSTLQPPKHRKGR 1739
Cdd:PRK07764 561 --FASPGNAEVLVTAlaeelggDWQVEAVVGPA-------PGAAGGEGPPAPASSGPPEEAArpaAPAAPAAPAAPAPAG 631
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1740 QAEGEMGSARRPEKRGAASVKTSGSPRSPAGPEKPRGTQKTTPGVPAVLRGRTVIYVPSPAPRAQPKGTPGPRATPRKVA 1819
Cdd:PRK07764 632 AAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPA 711
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1820 PPCLAQPAAPAKVPSPGQQRSRSLHRPAktSELATLSQPPRSATPPARLAKTPSSSSSQTSPASQPLPRKRPPVTQAAGA 1899
Cdd:PRK07764 712 GQADDPAAQPPQAAQGASAPSPAADDPV--PLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDD 789
|
410 420
....*....|....*....|..
gi 578832902 1900 LPGPGASPV--PKTPARTLLAK 1919
Cdd:PRK07764 790 APSMDDEDRrdAEEVAMELLEE 811
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
1518-1913 |
5.34e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 45.36 E-value: 5.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1518 PPAAAPTPTHRRTSAIPRAFTRERPQGRKEAPAPSKAAPAApPPARTQPSLI--------ADETPPCYSLSSSASSLSEP 1589
Cdd:PRK07764 401 AAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAP-PSPAGNAPAGgapspppaAAPSAQPAPAPAAAPEPTAA 479
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1590 EPSEPPAVHPRGREPAVTKDPGPGGGRDSSPSPRAA-EELLQrcissALPRRRPPVSGLRRRKPRATRLDER------PA 1662
Cdd:PRK07764 480 PAPAPPAAPAPAAAPAAPAAPAAPAGADDAATLRERwPEILA-----AVPKRSRKTWAILLPEATVLGVRGDtlvlgfST 554
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1663 EGSRERgeeaagsdrasdldsvewRAIQEGANSIVTWLHQaaaatreassesdsilsfVSGLSVGSTLQPPKHRKGRQAE 1742
Cdd:PRK07764 555 GGLARR------------------FASPGNAEVLVTALAE------------------ELGGDWQVEAVVGPAPGAAGGE 598
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1743 GEMGSARRPEKRGAASVKTSGSPRSPAGPekPRGTQKTTPGVPAVLRGRTVIYVP-SPAPRAQPKGTPGPRATPRKVAPP 1821
Cdd:PRK07764 599 GPPAPASSGPPEEAARPAAPAAPAAPAAP--APAGAAAAPAEASAAPAPGVAAPEhHPKHVAVPDASDGGDGWPAKAGGA 676
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1822 CLAQPAAPAKVPSPGQQRSRSLHRPAKTSELATLSQPPRSATPPARLAKTPSSSSSQTSPASQPLPRKRPPVTQAAGALP 1901
Cdd:PRK07764 677 APAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPA 756
|
410
....*....|..
gi 578832902 1902 GPGASPVPKTPA 1913
Cdd:PRK07764 757 QPPPPPAPAPAA 768
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
1722-2151 |
6.43e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 44.98 E-value: 6.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1722 SGLSVGSTLQPPKHRKGRQAEGEMGSARRPEKRGAASVKTSGSPRSPAGPEKPRGTQKTTPGVPAVLRGRTVIYVPSPAP 1801
Cdd:PRK07764 383 RRLGVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAP 462
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1802 RAQPkgTPGPRATPRKVAPPCLAQPAAPAKVPSPGQQrsrslhRPAKTSELATLSQPPRSATPPAR--LAKTPSSSSSQT 1879
Cdd:PRK07764 463 SAQP--APAPAAAPEPTAAPAPAPPAAPAPAAAPAAP------AAPAAPAGADDAATLRERWPEILaaVPKRSRKTWAIL 534
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1880 SPASQPLPRKRPPVTQA------AGALPGPGASPVPKTPARTLLAKQHK------TQRSPVRIPFMQRPARRGPPP-LAR 1946
Cdd:PRK07764 535 LPEATVLGVRGDTLVLGfstgglARRFASPGNAEVLVTALAEELGGDWQveavvgPAPGAAGGEGPPAPASSGPPEeAAR 614
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1947 AVPEPGPRGRAGTEAGPGARGGRLGLVRVASALSSGSESSDRSGFrrqlTFIKESPGLRRRRSELSSAESAASAPQGASP 2026
Cdd:PRK07764 615 PAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAV----PDASDGGDGWPAKAGGAAPAAPPPAPAPAAP 690
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 2027 RRGRPALPAvflcssrceELRAAPRQGPAPAR-QRPPAARPSPGERPARRTTSESPSRLPVRAPAARPETVKRYASLPHI 2105
Cdd:PRK07764 691 AAPAGAAPA---------QPAPAPAATPPAGQaDDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPP 761
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 578832902 2106 SVARRPDGavpaapaSADAARRSSDGEPRPLPRVAAPGTTWRRIRD 2151
Cdd:PRK07764 762 PAPAPAAA-------PAAAPPPSPPSEEEEMAEDDAPSMDDEDRRD 800
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1372-1945 |
7.16e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 45.31 E-value: 7.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1372 PVYMLVPAPAPAQEDDSCTDSAEGT----PVNFSSAASLSDETLQGPPRdQPGGPAGRQRPTGRPTSARQAMGHRHKAGG 1447
Cdd:PHA03247 2551 PPPPLPPAAPPAAPDRSVPPPRPAPrpsePAVTSRARRPDAPPQSARPR-APVDDRGDPRGPAPPSPLPPDTHAPDPPPP 2629
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1448 AGRSAEQSRGAGKNRAGLELPLGRPPSAPADKDGSKPGRTRGDGALQSLCLTTPTEEAVYCFYGNDSD-EEPPAAAPTPT 1526
Cdd:PHA03247 2630 SPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSlADPPPPPPTPE 2709
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1527 HRRTSAIPRAFTRERPQGRKEAPAPSKAAPAAPPPArTQPSLIADETPPcyslsSSASSLSEPEPSEPPAVHPRGREPAV 1606
Cdd:PHA03247 2710 PAPHALVSATPLPPGPAAARQASPALPAAPAPPAVP-AGPATPGGPARP-----ARPPTTAGPPAPAPPAAPAAGPPRRL 2783
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1607 TKDPGP--GGGRDSSPSPR--AAEELLQRCISSALPRRRPPVSGLrRRKPRATRLDERPAEGSRERGEEAAGSdrasdld 1682
Cdd:PHA03247 2784 TRPAVAslSESRESLPSPWdpADPPAAVLAPAAALPPAASPAGPL-PPPTSAQPTAPPPPPGPPPPSLPLGGS------- 2855
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1683 svewraIQEGANSIVTWLHQAAAATREASSESdsilsfvsglSVGSTLQPPKHRKGR-QAEGEMGSARRPEKRGAASVKT 1761
Cdd:PHA03247 2856 ------VAPGGDVRRRPPSRSPAAKPAAPARP----------PVRRLARPAVSRSTEsFALPPDQPERPPQPQAPPPPQP 2919
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1762 SGSPRSPAGPEKPRGTQKTTPGVPAVLRGRTVIYVPSPAPRAQPKG--TPGPRATPRKVAPpclaQPAAPAKVPSPGQQR 1839
Cdd:PHA03247 2920 QPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGalVPGRVAVPRFRVP----QPAPSREAPASSTPP 2995
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1840 SRSLHRPAKTSELATLSQPPRSATPPARLAKTPSSSSSQTSPASQPLPRKRPPV--TQAAGALPGPGASPVPKTPARTLL 1917
Cdd:PHA03247 2996 LTGHSLSRVSSWASSLALHEETDPPPVSLKQTLWPPDDTEDSDADSLFDSDSERsdLEALDPLPPEPHDPFAHEPDPATP 3075
|
570 580
....*....|....*....|....*...
gi 578832902 1918 AKQHKTQRSpvripfmqrpARRGPPPLA 1945
Cdd:PHA03247 3076 EAGARESPS----------SQFGPPPLS 3093
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
1413-1631 |
7.36e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 44.98 E-value: 7.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1413 GPPRDQPGGPAGRQRPTGRPTSARQAMG--HRHKAGGAGRSAEQSRGAGKNRAGLELPLGRPPSAPADKDGSKPGRTRGD 1490
Cdd:PRK07764 596 GGEGPPAPASSGPPEEAARPAAPAAPAApaAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGG 675
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1491 GALqslclTTPTEEAVYCFYGNDSDEEPPAAAPTPTHRRTSAIPRAFTRERPQGRKEAPAPSKAAPAAPPPARTQPSLIA 1570
Cdd:PRK07764 676 AAP-----AAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPD 750
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 578832902 1571 DETPPCYSLSSSASSLSEPEPSEPPAVHPRGREPAVTKDPGPGGGRDSSPSPRAAEELLQR 1631
Cdd:PRK07764 751 PAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAPSMDDEDRRDAEEVAMELLEE 811
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1858-2265 |
1.08e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 44.39 E-value: 1.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1858 PPRSATPPARLAKTPSSSSSQTSPASQPLPRKRPPVTQAAGALPGPGASPVPKTPARTllakqhktqrSPVRIPFMQRPA 1937
Cdd:PHA03307 72 PPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPS----------PAPDLSEMLRPV 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1938 RRGPPPLARAVPEPGPRGRAGTEAGPGARGGRLGLVRVASALSSGSESSDRSGFRRQLTFIKESPGLRRRRSELSSAESA 2017
Cdd:PHA03307 142 GSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPA 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 2018 ASAPQGASPRRGRPALPAVFLCSSRCEE--LRAAPRQGPAPARQRPPAARPSPGERPARRTTSESPSRlPVRAPAARPEt 2095
Cdd:PHA03307 222 PAPGRSAADDAGASSSDSSSSESSGCGWgpENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSS-SPRERSPSPS- 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 2096 vkryaslphisvarrpdgavpaapasadaarrSSDGEPRPLPRVAAPGTTWRRIRDEDVPHILRSTLPATALPLrGSTPE 2175
Cdd:PHA03307 300 --------------------------------PSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAV-SPGPS 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 2176 DAPAGPPPRKTSDAVVQTEEVAAPKTNSSTSPSLETREPPGAPAGGQLSLLGSDVDGPSLAKAPISAPFVHEGLGVAVGG 2255
Cdd:PHA03307 347 PSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRFPAGRPRPSPLDAGAASGAF 426
|
410
....*....|
gi 578832902 2256 FPASRHGSPS 2265
Cdd:PHA03307 427 YARYPLLTPS 436
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
1603-1865 |
1.19e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 44.07 E-value: 1.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1603 EPAVTKDPGPGGGRDSSPsPRAAEELLQRCISSALPRRRPPVSGLRRRKPRATRLDERPAEGSRERGEEAAGSDRASDLD 1682
Cdd:PRK07003 359 EPAVTGGGAPGGGVPARV-AGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATAD 437
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1683 SVEwRAIQEGANSIVTWLHQAAAATREASSESDSILSFVSGLSVGSTLQPPKHRKGRQAEGEMGSARRPEKRGAASVKTS 1762
Cdd:PRK07003 438 RGD-DAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAA 516
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1763 GSPRSPAGPEKPrgTQKTTPGVPA----------------VLR--GRTVIYVPSPAPRAQPKGTPGPRATPRKVAPPcla 1824
Cdd:PRK07003 517 SREDAPAAAAPP--APEARPPTPAaaapaaraggaaaaldVLRnaGMRVSSDRGARAAAAAKPAAAPAAAPKPAAPR--- 591
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 578832902 1825 qPAAPakVPSPGQQRSRSLHRPAKTSElATLSQPPRSATPP 1865
Cdd:PRK07003 592 -VAVQ--VPTPRARAATGDAPPNGAAR-AEQAAESRGAPPP 628
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
1766-1914 |
1.45e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 43.93 E-value: 1.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1766 RSPAGPEKPRGTQKTTPGVPAVLRgrtviyvPSPAPRAQPKGTPGPRATPRKVAPPCLAQPAAPAkvpspgqqrsrslhr 1845
Cdd:PRK14951 365 KPAAAAEAAAPAEKKTPARPEAAA-------PAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAP--------------- 422
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1846 PAKTSELATLSQPPRSATPPARLAKTPSSSSSQTSPASQPLPRKRP-PVTQAAGALPGPGASPVPKTPAR 1914
Cdd:PRK14951 423 PAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQAAPETVAIPVRVAPePAVASAAPAPAAAPAAARLTPTE 492
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
2048-2301 |
1.55e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 43.71 E-value: 1.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 2048 AAPRQGPAPARQRPPAARPSPGERPArrttseSPSRLPVRAPAARPEtvkryaslphISVARRPDGAVPAAPASADAARR 2127
Cdd:PRK12323 379 AAPVAQPAPAAAAPAAAAPAPAAPPA------APAAAPAAAAAARAV----------AAAPARRSPAPEALAAARQASAR 442
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 2128 SSDGEPRPLPRVAApgttwrrirdedvphilrstLPATALPlrgstPEDAPAGPPPRKTSDAVVQTEEVAAPKTNSSTSP 2207
Cdd:PRK12323 443 GPGGAPAPAPAPAA--------------------APAAAAR-----PAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPP 497
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 2208 SLEtrEPPGAPaggqlsllgsdvdgPSLAKAPISAPFvhEGLGVAVGGFPASRHGSPSRSARVPPFNYVPSPMVVAATTD 2287
Cdd:PRK12323 498 PWE--ELPPEF--------------ASPAPAQPDAAP--AGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEP 559
|
250
....*....|....
gi 578832902 2288 SAAEKAPATASATL 2301
Cdd:PRK12323 560 VVAPRPPRASASGL 573
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
1732-1969 |
1.61e-03 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 43.90 E-value: 1.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1732 PPKHRKGRQAEGEMGSARRPEKRGAASVKTSGSPRSPAGPEKPRGTQKTTPGVPAVLRGRTVIYVPSPAPRAQPKGTPGP 1811
Cdd:PHA03378 529 PPQPRAGRRAPCVYTEDLDIESDEPASTEPVHDQLLPAPGLGPLQIQPLTSPTTSQLASSAPSYAQTPWPVPHPSQTPEP 608
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1812 RAT---------PRKVAPPCLAQPAAPAKVpSPGQQRSRSLHRPAKTSELATLSQPPRSATPPARLAKTPSSSSSQTSPA 1882
Cdd:PHA03378 609 PTTqshipetsaPRQWPMPLRPIPMRPLRM-QPITFNVLVFPTPHQPPQVEITPYKPTWTQIGHIPYQPSPTGANTMLPI 687
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1883 SQPLPRKRPPvTQAAGALPGPGASPVPKTPARTLLAKQHKTQRSPVRIPFMQRPARRGPPPLARAVPEPGPRGRAGTEAG 1962
Cdd:PHA03378 688 QWAPGTMQPP-PRAPTPMRPPAAPPGRAQRPAAATGRARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGRARP 766
|
....*..
gi 578832902 1963 PGARGGR 1969
Cdd:PHA03378 767 PAAAPGA 773
|
|
| SAMP |
pfam05924 |
SAMP Motif; This short region is found repeated in the mid region of the adenomatous polyposis ... |
1621-1642 |
1.77e-03 |
|
SAMP Motif; This short region is found repeated in the mid region of the adenomatous polyposis proteins (APCs). This motif binds axin.
Pssm-ID: 461782 Cd Length: 22 Bit Score: 37.57 E-value: 1.77e-03
|
| APC_r |
pfam05923 |
APC repeat; This short region is found repeated in the mid region of the adenomatous polyposis ... |
1386-1408 |
2.22e-03 |
|
APC repeat; This short region is found repeated in the mid region of the adenomatous polyposis proteins (APCs). In the human protein many cancer-linked SNPs are found near the first three occurrences of the motif. These repeats bind beta-catenin.
Pssm-ID: 461781 Cd Length: 24 Bit Score: 37.36 E-value: 2.22e-03
|
| APC_r |
pfam05923 |
APC repeat; This short region is found repeated in the mid region of the adenomatous polyposis ... |
1260-1281 |
2.33e-03 |
|
APC repeat; This short region is found repeated in the mid region of the adenomatous polyposis proteins (APCs). In the human protein many cancer-linked SNPs are found near the first three occurrences of the motif. These repeats bind beta-catenin.
Pssm-ID: 461781 Cd Length: 24 Bit Score: 37.36 E-value: 2.33e-03
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
1717-1915 |
2.51e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 42.94 E-value: 2.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1717 ILSFVSGLSVGSTlQPPKHRKGRQAEgEMGSARRPEKRGAASVKTSGSPRSPAGPEKPRGTQKTTPGV--PAVLRGRTVI 1794
Cdd:PRK12323 360 MLAFRPGQSGGGA-GPATAAAAPVAQ-PAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARrsPAPEALAAAR 437
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1795 YVPSPAPRAQPKGTPGPRATPRKVAPPCLAQPAAPAKVPSPGQQRSrslhRPAKTSELATLSQPPRSATPPARLA---KT 1871
Cdd:PRK12323 438 QASARGPGGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARA----APAAAPAPADDDPPPWEELPPEFASpapAQ 513
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 578832902 1872 PSSSSSQTSPASQPLPRKRPPVTQAAGALPGPGASPVPKTPART 1915
Cdd:PRK12323 514 PDAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAAT 557
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
1748-1961 |
2.77e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 42.91 E-value: 2.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1748 ARRPEKRGAASVKTSGSPRSPAGPEKPRGTQKTTPGVPAVlrgrtviyvpspAPRAQPKGTPGPRATPRKVAPPCLAQPA 1827
Cdd:PRK07003 357 AFEPAVTGGGAPGGGVPARVAGAVPAPGARAAAAVGASAV------------PAVTAVTGAAGAALAPKAAAAAAATRAE 424
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1828 APAKVPSPGQQRSRSlhrpaktsELATLSQPPRSATPPARLAKTPSSSSSQTSPASQPLPRKRPPVTQAAGALPGPGASP 1907
Cdd:PRK07003 425 APPAAPAPPATADRG--------DDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRA 496
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 578832902 1908 VPKTPArtlLAKQHKTQRSPVRIPFMQRPARRGPPPLARAVPEPG---PRGRAGTEA 1961
Cdd:PRK07003 497 AAPSAA---TPAAVPDARAPAAASREDAPAAAAPPAPEARPPTPAaaaPAARAGGAA 550
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2048-2299 |
6.70e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 41.90 E-value: 6.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 2048 AAPRQGPAPARQRPPAARPSPGerPARRTTSESPSRLPVRAPAARPEtvkryaslphiSVARRPDGAVPAAPASADAARR 2127
Cdd:PRK07764 392 GAPAAAAPSAAAAAPAAAPAPA--AAAPAAAAAPAPAAAPQPAPAPA-----------PAPAPPSPAGNAPAGGAPSPPP 458
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 2128 SSDGEPRPLPRVAAPgttwrrirdedvPHILRSTLPATALPLRGSTPEDAPAGPPPRKTSDAVVQTEEV------AAPKT 2201
Cdd:PRK07764 459 AAAPSAQPAPAPAAA------------PEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAATLRERwpeilaAVPKR 526
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 2202 NSSTSPSLETREPPGAPAGGQLSLlgsDVDGPSLAK-------APISAPFVHEGLG-------VAVGGFPASRHGSPSRS 2267
Cdd:PRK07764 527 SRKTWAILLPEATVLGVRGDTLVL---GFSTGGLARrfaspgnAEVLVTALAEELGgdwqveaVVGPAPGAAGGEGPPAP 603
|
250 260 270
....*....|....*....|....*....|..
gi 578832902 2268 ARVPPFNYVPSPMVVAATTDSAAEKAPATASA 2299
Cdd:PRK07764 604 ASSGPPEEAARPAAPAAPAAPAAPAPAGAAAA 635
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
1768-1958 |
7.19e-03 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 41.59 E-value: 7.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1768 PAGPEKPRGTQKTTPGVPAVLRGRTVIYVPSPAPRAQPKGTPGPRATPRKVAPPCLAQPAAPAKVPSPGQQRSRSLHRPA 1847
Cdd:PHA03378 670 GHIPYQPSPTGANTMLPIQWAPGTMQPPPRAPTPMRPPAAPPGRAQRPAAATGRARPPAAAPGRARPPAAAPGRARPPAA 749
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1848 KTSELATLSQPPRSATPPArlaKTPSSSSSQTSPASQPLPRKRPPvtqaagalPGPGASPVPKTP--ARTLLAKQHKTQR 1925
Cdd:PHA03378 750 APGRARPPAAAPGRARPPA---AAPGAPTPQPPPQAPPAPQQRPR--------GAPTPQPPPQAGptSMQLMPRAAPGQQ 818
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 578832902 1926 SPVRIPFMQ---------RPARRGPPPLAR---AVPEPGPRGRAG 1958
Cdd:PHA03378 819 GPTKQILRQlltggvkrgRPSLKKPAALERqaaAGPTPSPGSGTS 863
|
|
| PHA03309 |
PHA03309 |
transcriptional regulator ICP4; Provisional |
1619-1960 |
8.49e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 165564 [Multi-domain] Cd Length: 2033 Bit Score: 41.76 E-value: 8.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1619 SPSPR-AAEELLQR----------------CISSALPRRRPPVSglRRRKPRATRLDERPAEGSRERGEEAAGSdRASDL 1681
Cdd:PHA03309 1715 SPSPRdVALRLLERqqelnrqlllelrrgsCEISPSPRRRDAEG--RRFGCRQDDDDGYDYEGGRESPERVLGR-RQSRR 1791
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1682 DSVEWRAIQEGANSIVTWLHQAAAATREASSESDSILSfvsglsvgstlqPPKHRKGRQAEGEMGSARRPEKRGAASvkt 1761
Cdd:PHA03309 1792 DSVPVRRRSGAANCGGRWMISAGRSSSSSSSSSSSSSS------------SPSSRPSRSATPSLSPSPSPPRRAPVD--- 1856
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1762 sgspRSPAGPEKPRGTQKTTPGvpavlrgrtviyvpSPAPRAQPKGTPGPRATPRKVAPPCLAQpaapakvpspGQQRSR 1841
Cdd:PHA03309 1857 ----RSRSGRRRERDRPSANPF--------------RWAPRQRSRADHSPDGTAPGDAPLNLED----------GPGRGR 1908
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 1842 SLHRPAKTSELATLSQPPRS--------ATPPARLAKTPSSSSSQTSPASQPLPR-KRPPVTQAAGALPGPGA-SPVPKT 1911
Cdd:PHA03309 1909 PIWTPSSATTLPSRSGPEDSvdetetedSAPPARLAPSPLETSRAEDSEDSEYPEySNPRLGKSPPALKSREArRPSSKQ 1988
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 578832902 1912 PARTLLAKQHKTQRSPVRIPFMQRPArrgppPLARAVPEPGPRGRAGTE 1960
Cdd:PHA03309 1989 PRRPSSGKNGHTDVSAASAFFLGRPA-----PGSCGRRPLGARVRGGTE 2032
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
2021-2236 |
9.36e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 41.01 E-value: 9.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 2021 PQGASPRRGR-PALPAVFLCSSRCEELRAAPRQGPAPARQRPPAARPSPGERPArrttsespsrlPVRAPAARPETVKRY 2099
Cdd:PRK12323 392 PAAAAPAPAApPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPG-----------GAPAPAPAPAAAPAA 460
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578832902 2100 ASLPHISVARRPdgavpAAPASADAARRSSDGEPRPLPRVAAPgttWRRIRDEDVPHILRSTLPATALPLRGSTPEDAPA 2179
Cdd:PRK12323 461 AARPAAAGPRPV-----AAAAAAAPARAAPAAAPAPADDDPPP---WEELPPEFASPAPAQPDAAPAGWVAESIPDPATA 532
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 578832902 2180 GPPPRKTSDAVVQTEEVAAPKTNSStspslETREPPGAPAGGQLSLLG-SDVDGPSLA 2236
Cdd:PRK12323 533 DPDDAFETLAPAPAAAPAPRAAAAT-----EPVVAPRPPRASASGLPDmFDGDWPALA 585
|
|
| Arm |
pfam00514 |
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ... |
525-562 |
9.38e-03 |
|
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.
Pssm-ID: 425727 [Multi-domain] Cd Length: 41 Bit Score: 35.89 E-value: 9.38e-03
10 20 30
....*....|....*....|....*....|....*...
gi 578832902 525 KKVLREAGSVTALVQCvLRATKESTLKSVLSALWNLSA 562
Cdd:pfam00514 5 KQAVIEAGAVPPLVRL-LSSPDEEVQEEAAWALSNLAA 41
|
|
| Arm |
pfam00514 |
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ... |
661-696 |
9.76e-03 |
|
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.
Pssm-ID: 425727 [Multi-domain] Cd Length: 41 Bit Score: 35.89 E-value: 9.76e-03
10 20 30
....*....|....*....|....*....|....*.
gi 578832902 661 ELLWDLGAVGMLRNLVHSKHKMIAMGSAAALRNLLA 696
Cdd:pfam00514 6 QAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLAA 41
|
|
| |
