|
Name |
Accession |
Description |
Interval |
E-value |
| TPR |
COG0790 |
TPR repeat [General function prediction only]; |
282-476 |
1.49e-47 |
|
TPR repeat [General function prediction only]; :
Pssm-ID: 440553 [Multi-domain] Cd Length: 241 Bit Score: 167.80 E-value: 1.49e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578835594 282 WDIYQYYKFLAERGDVQIQVSLGQLHLIGRkGLDQDYYKALHYFLKAAKAGSANAMAFIGKMYLEGNAaVPQNNATAFKY 361
Cdd:COG0790 48 AAAAAAAAAAAAAGGAEAQYNLGLMYAEGR-GVPKDYEKALEWFEKAAEQGDAEAQYNLGLMYEEGLG-VPQDYAKALEW 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578835594 362 FSMAASKGNAIGLHGLGLLYFHGKGVPLNYAEALKYFQKAAEKGWPDAQFQLGFMYYSGSGIWKDYKLAFKYFYLASQSG 441
Cdd:COG0790 126 YEKAAEQGDADAQYNLGLLYLNGEGVPKDPAKAAEWYRKAAEQGDADAQYNLGVLYENGRGVPKDPAKALEWYRKAAEQG 205
|
170 180 190
....*....|....*....|....*....|....*
gi 578835594 442 QPLAIYYLAKMYATGTGVVRSCRTAVELYKGVCEL 476
Cdd:COG0790 206 DADAQYNLGRLYLNGEGVEKDLEKALRWLRKAAEQ 240
|
|
| TPR |
COG0790 |
TPR repeat [General function prediction only]; |
124-331 |
2.41e-19 |
|
TPR repeat [General function prediction only]; :
Pssm-ID: 440553 [Multi-domain] Cd Length: 241 Bit Score: 87.68 E-value: 2.41e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578835594 124 QKQKEEAYLLFAKAADMGNLKAMEKMADALLFGNFGVQNITAAIQLYESLAKEGSCKAQNALGFLSSYGIGMEYDQAKAL 203
Cdd:COG0790 80 PKDYEKALEWFEKAAEQGDAEAQYNLGLMYEEGLGVPQDYAKALEWYEKAAEQGDADAQYNLGLLYLNGEGVPKDPAKAA 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578835594 204 IYYTFGSAGGNMMSQMILGYRYLSGINVLQNCEVALSYYKKVadyiadtfeksegvpvekvrlterpenlssnseildwd 283
Cdd:COG0790 160 EWYRKAAEQGDADAQYNLGVLYENGRGVPKDPAKALEWYRKA-------------------------------------- 201
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 578835594 284 iyqyykflAERGDVQIQVSLGQLHLIGRkGLDQDYYKALHYFLKAAKA 331
Cdd:COG0790 202 --------AEQGDADAQYNLGRLYLNGE-GVEKDLEKALRWLRKAAEQ 240
|
|
| TPR |
COG0790 |
TPR repeat [General function prediction only]; |
498-625 |
2.73e-13 |
|
TPR repeat [General function prediction only]; :
Pssm-ID: 440553 [Multi-domain] Cd Length: 241 Bit Score: 69.96 E-value: 2.73e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578835594 498 SLVQYALLAEMGYEVAQSNSAFILESKKANILEKEKMYPMALLLWNRAAIQGNAFARVKIGDYHYYGYGTKKDYQTAATH 577
Cdd:COG0790 10 AAAAAAAALAAAAAAAGAAAAAAAAAAAAAALAAAAGAAAAAAAAAAAAAAGGAEAQYNLGLMYAEGRGVPKDYEKALEW 89
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 578835594 578 YSIAANKyHNAQAMFNLAYMYEHGLGITKDIHLARRLYDMAA-QTSPDA 625
Cdd:COG0790 90 FEKAAEQ-GDAEAQYNLGLMYEEGLGVPQDYAKALEWYEKAAeQGDADA 137
|
|
| Mplasa_alph_rch super family |
cl37461 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
18-128 |
5.88e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown. The actual alignment was detected with superfamily member TIGR04523:
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 46.55 E-value: 5.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578835594 18 IKTIKAEEHNKRQKERNVTTQVS-----VNEIKQYLSHILEQRTSSNV--------INKRENLLEKKKNQRKIRIKGIQN 84
Cdd:TIGR04523 309 NKELKSELKNQEKKLEEIQNQISqnnkiISQLNEQISQLKKELTNSESensekqreLEEKQNEIEKLKKENQSYKQEIKN 388
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 578835594 85 kdiLKRNKNHLQKQAEKNftDEGDQLFKMGIKVLQQSKSQKQKE 128
Cdd:TIGR04523 389 ---LESQINDLESKIQNQ--EKLNQQKDEQIKKLQQEKELLEKE 427
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| TPR |
COG0790 |
TPR repeat [General function prediction only]; |
282-476 |
1.49e-47 |
|
TPR repeat [General function prediction only];
Pssm-ID: 440553 [Multi-domain] Cd Length: 241 Bit Score: 167.80 E-value: 1.49e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578835594 282 WDIYQYYKFLAERGDVQIQVSLGQLHLIGRkGLDQDYYKALHYFLKAAKAGSANAMAFIGKMYLEGNAaVPQNNATAFKY 361
Cdd:COG0790 48 AAAAAAAAAAAAAGGAEAQYNLGLMYAEGR-GVPKDYEKALEWFEKAAEQGDAEAQYNLGLMYEEGLG-VPQDYAKALEW 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578835594 362 FSMAASKGNAIGLHGLGLLYFHGKGVPLNYAEALKYFQKAAEKGWPDAQFQLGFMYYSGSGIWKDYKLAFKYFYLASQSG 441
Cdd:COG0790 126 YEKAAEQGDADAQYNLGLLYLNGEGVPKDPAKAAEWYRKAAEQGDADAQYNLGVLYENGRGVPKDPAKALEWYRKAAEQG 205
|
170 180 190
....*....|....*....|....*....|....*
gi 578835594 442 QPLAIYYLAKMYATGTGVVRSCRTAVELYKGVCEL 476
Cdd:COG0790 206 DADAQYNLGRLYLNGEGVEKDLEKALRWLRKAAEQ 240
|
|
| TPR |
COG0790 |
TPR repeat [General function prediction only]; |
124-331 |
2.41e-19 |
|
TPR repeat [General function prediction only];
Pssm-ID: 440553 [Multi-domain] Cd Length: 241 Bit Score: 87.68 E-value: 2.41e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578835594 124 QKQKEEAYLLFAKAADMGNLKAMEKMADALLFGNFGVQNITAAIQLYESLAKEGSCKAQNALGFLSSYGIGMEYDQAKAL 203
Cdd:COG0790 80 PKDYEKALEWFEKAAEQGDAEAQYNLGLMYEEGLGVPQDYAKALEWYEKAAEQGDADAQYNLGLLYLNGEGVPKDPAKAA 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578835594 204 IYYTFGSAGGNMMSQMILGYRYLSGINVLQNCEVALSYYKKVadyiadtfeksegvpvekvrlterpenlssnseildwd 283
Cdd:COG0790 160 EWYRKAAEQGDADAQYNLGVLYENGRGVPKDPAKALEWYRKA-------------------------------------- 201
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 578835594 284 iyqyykflAERGDVQIQVSLGQLHLIGRkGLDQDYYKALHYFLKAAKA 331
Cdd:COG0790 202 --------AEQGDADAQYNLGRLYLNGE-GVEKDLEKALRWLRKAAEQ 240
|
|
| TPR |
COG0790 |
TPR repeat [General function prediction only]; |
498-625 |
2.73e-13 |
|
TPR repeat [General function prediction only];
Pssm-ID: 440553 [Multi-domain] Cd Length: 241 Bit Score: 69.96 E-value: 2.73e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578835594 498 SLVQYALLAEMGYEVAQSNSAFILESKKANILEKEKMYPMALLLWNRAAIQGNAFARVKIGDYHYYGYGTKKDYQTAATH 577
Cdd:COG0790 10 AAAAAAAALAAAAAAAGAAAAAAAAAAAAAALAAAAGAAAAAAAAAAAAAAGGAEAQYNLGLMYAEGRGVPKDYEKALEW 89
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 578835594 578 YSIAANKyHNAQAMFNLAYMYEHGLGITKDIHLARRLYDMAA-QTSPDA 625
Cdd:COG0790 90 FEKAAEQ-GDAEAQYNLGLMYEEGLGVPQDYAKALEWYEKAAeQGDADA 137
|
|
| Sel1 |
pfam08238 |
Sel1 repeat; This short repeat is found in the Sel1 protein. It is related to TPR repeats. |
588-620 |
1.56e-06 |
|
Sel1 repeat; This short repeat is found in the Sel1 protein. It is related to TPR repeats.
Pssm-ID: 429881 [Multi-domain] Cd Length: 35 Bit Score: 44.82 E-value: 1.56e-06
10 20 30
....*....|....*....|....*....|...
gi 578835594 588 AQAMFNLAYMYEHGLGITKDIHLARRLYDMAAQ 620
Cdd:pfam08238 1 AEAQYRLGYLYLYGLGVPKDPEKALEWYEKAAE 33
|
|
| SEL1 |
smart00671 |
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences. |
588-620 |
1.71e-06 |
|
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.
Pssm-ID: 214772 [Multi-domain] Cd Length: 36 Bit Score: 44.86 E-value: 1.71e-06
10 20 30
....*....|....*....|....*....|...
gi 578835594 588 AQAMFNLAYMYEHGLGITKDIHLARRLYDMAAQ 620
Cdd:smart00671 1 AEAQYNLGQMYEYGLGVPKDLEKALEYYKKAAE 33
|
|
| SEL1 |
smart00671 |
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences. |
407-441 |
2.48e-06 |
|
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.
Pssm-ID: 214772 [Multi-domain] Cd Length: 36 Bit Score: 44.47 E-value: 2.48e-06
10 20 30
....*....|....*....|....*....|....*
gi 578835594 407 PDAQFQLGFMYYSGSGIWKDYKLAFKYFYLASQSG 441
Cdd:smart00671 1 AEAQYNLGQMYEYGLGVPKDLEKALEYYKKAAELG 35
|
|
| Sel1 |
pfam08238 |
Sel1 repeat; This short repeat is found in the Sel1 protein. It is related to TPR repeats. |
371-405 |
7.00e-06 |
|
Sel1 repeat; This short repeat is found in the Sel1 protein. It is related to TPR repeats.
Pssm-ID: 429881 [Multi-domain] Cd Length: 35 Bit Score: 43.28 E-value: 7.00e-06
10 20 30
....*....|....*....|....*....|....*
gi 578835594 371 AIGLHGLGLLYFHGKGVPLNYAEALKYFQKAAEKG 405
Cdd:pfam08238 1 AEAQYRLGYLYLYGLGVPKDPEKALEWYEKAAELG 35
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
18-128 |
5.88e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 46.55 E-value: 5.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578835594 18 IKTIKAEEHNKRQKERNVTTQVS-----VNEIKQYLSHILEQRTSSNV--------INKRENLLEKKKNQRKIRIKGIQN 84
Cdd:TIGR04523 309 NKELKSELKNQEKKLEEIQNQISqnnkiISQLNEQISQLKKELTNSESensekqreLEEKQNEIEKLKKENQSYKQEIKN 388
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 578835594 85 kdiLKRNKNHLQKQAEKNftDEGDQLFKMGIKVLQQSKSQKQKE 128
Cdd:TIGR04523 389 ---LESQINDLESKIQNQ--EKLNQQKDEQIKKLQQEKELLEKE 427
|
|
| SEL1 |
smart00671 |
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences. |
216-247 |
9.20e-03 |
|
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.
Pssm-ID: 214772 [Multi-domain] Cd Length: 36 Bit Score: 34.46 E-value: 9.20e-03
10 20 30
....*....|....*....|....*....|..
gi 578835594 216 MSQMILGYRYLSGINVLQNCEVALSYYKKVAD 247
Cdd:smart00671 2 EAQYNLGQMYEYGLGVPKDLEKALEYYKKAAE 33
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| TPR |
COG0790 |
TPR repeat [General function prediction only]; |
282-476 |
1.49e-47 |
|
TPR repeat [General function prediction only];
Pssm-ID: 440553 [Multi-domain] Cd Length: 241 Bit Score: 167.80 E-value: 1.49e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578835594 282 WDIYQYYKFLAERGDVQIQVSLGQLHLIGRkGLDQDYYKALHYFLKAAKAGSANAMAFIGKMYLEGNAaVPQNNATAFKY 361
Cdd:COG0790 48 AAAAAAAAAAAAAGGAEAQYNLGLMYAEGR-GVPKDYEKALEWFEKAAEQGDAEAQYNLGLMYEEGLG-VPQDYAKALEW 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578835594 362 FSMAASKGNAIGLHGLGLLYFHGKGVPLNYAEALKYFQKAAEKGWPDAQFQLGFMYYSGSGIWKDYKLAFKYFYLASQSG 441
Cdd:COG0790 126 YEKAAEQGDADAQYNLGLLYLNGEGVPKDPAKAAEWYRKAAEQGDADAQYNLGVLYENGRGVPKDPAKALEWYRKAAEQG 205
|
170 180 190
....*....|....*....|....*....|....*
gi 578835594 442 QPLAIYYLAKMYATGTGVVRSCRTAVELYKGVCEL 476
Cdd:COG0790 206 DADAQYNLGRLYLNGEGVEKDLEKALRWLRKAAEQ 240
|
|
| TPR |
COG0790 |
TPR repeat [General function prediction only]; |
316-478 |
5.68e-39 |
|
TPR repeat [General function prediction only];
Pssm-ID: 440553 [Multi-domain] Cd Length: 241 Bit Score: 144.30 E-value: 5.68e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578835594 316 QDYYKALHYFLKAAKAGSANAMAFIGKMYLEGNAaVPQNNATAFKYFSMAASKGNAIGLHGLGLLYFHGKGVPLNYAEAL 395
Cdd:COG0790 45 AGAAAAAAAAAAAAAAGGAEAQYNLGLMYAEGRG-VPKDYEKALEWFEKAAEQGDAEAQYNLGLMYEEGLGVPQDYAKAL 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578835594 396 KYFQKAAEKGWPDAQFQLGFMYYSGSGIWKDYKLAFKYFYLASQSGQPLAIYYLAKMYATGTGVVRSCRTAVELYKGVCE 475
Cdd:COG0790 124 EWYEKAAEQGDADAQYNLGLLYLNGEGVPKDPAKAAEWYRKAAEQGDADAQYNLGVLYENGRGVPKDPAKALEWYRKAAE 203
|
...
gi 578835594 476 LGH 478
Cdd:COG0790 204 QGD 206
|
|
| TPR |
COG0790 |
TPR repeat [General function prediction only]; |
326-620 |
1.50e-37 |
|
TPR repeat [General function prediction only];
Pssm-ID: 440553 [Multi-domain] Cd Length: 241 Bit Score: 140.06 E-value: 1.50e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578835594 326 LKAAKAGSANAMAFIGKMYLEGNAAVPQNNATAFKYFSMAASKGNAIGLHGLGLLYFHGKGVPLNYAEALKYFQKAAEKG 405
Cdd:COG0790 18 LAAAAAAAGAAAAAAAAAAAAAALAAAAGAAAAAAAAAAAAAAGGAEAQYNLGLMYAEGRGVPKDYEKALEWFEKAAEQG 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578835594 406 WPDAQFQLGFMYYSGSGIWKDYKLAFKYFYLASQSGQPLAIYYLAKMYATGTGVVRSCRTAVELYKgvcelghwaekflt 485
Cdd:COG0790 98 DAEAQYNLGLMYEEGLGVPQDYAKALEWYEKAAEQGDADAQYNLGLLYLNGEGVPKDPAKAAEWYR-------------- 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578835594 486 ayfaykdgdidsslvqyallaemgyevaqsnsafileskkanilekekmypmalllwnRAAIQGNAFARVKIGDYHYYGY 565
Cdd:COG0790 164 ----------------------------------------------------------KAAEQGDADAQYNLGVLYENGR 185
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 578835594 566 GTKKDYQTAATHYSIAANKyHNAQAMFNLAYMYEHGLGITKDIHLARRLYDMAAQ 620
Cdd:COG0790 186 GVPKDPAKALEWYRKAAEQ-GDADAQYNLGRLYLNGEGVEKDLEKALRWLRKAAE 239
|
|
| TPR |
COG0790 |
TPR repeat [General function prediction only]; |
128-437 |
3.08e-33 |
|
TPR repeat [General function prediction only];
Pssm-ID: 440553 [Multi-domain] Cd Length: 241 Bit Score: 128.12 E-value: 3.08e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578835594 128 EEAYLLFAKAADMGNLKAMEKMADALLFGNFGVQNITAAIQLYESLAKEGSCKAQNALGFLSSYGIGMEYDQAKALIYYT 207
Cdd:COG0790 12 AAAAAALAAAAAAAGAAAAAAAAAAAAAALAAAAGAAAAAAAAAAAAAAGGAEAQYNLGLMYAEGRGVPKDYEKALEWFE 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578835594 208 FGSAGGNMMSQMILGYRYLSGinvlqncevalsyykkvadyiadtfeksegvpvekvrlterpenlssnseildwdiyqy 287
Cdd:COG0790 92 KAAEQGDAEAQYNLGLMYEEG----------------------------------------------------------- 112
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578835594 288 ykflaergdvqiqvslgqlhligrKGLDQDYYKALHYFLKAAKAGSANAMAFIGKMYLEGNaAVPQNNATAFKYFSMAAS 367
Cdd:COG0790 113 ------------------------LGVPQDYAKALEWYEKAAEQGDADAQYNLGLLYLNGE-GVPKDPAKAAEWYRKAAE 167
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578835594 368 KGNAIGLHGLGLLYFHGKGVPLNYAEALKYFQKAAEKGWPDAQFQLGFMYYSGSGIWKDYKLAFKYFYLA 437
Cdd:COG0790 168 QGDADAQYNLGVLYENGRGVPKDPAKALEWYRKAAEQGDADAQYNLGRLYLNGEGVEKDLEKALRWLRKA 237
|
|
| TPR |
COG0790 |
TPR repeat [General function prediction only]; |
124-331 |
2.41e-19 |
|
TPR repeat [General function prediction only];
Pssm-ID: 440553 [Multi-domain] Cd Length: 241 Bit Score: 87.68 E-value: 2.41e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578835594 124 QKQKEEAYLLFAKAADMGNLKAMEKMADALLFGNFGVQNITAAIQLYESLAKEGSCKAQNALGFLSSYGIGMEYDQAKAL 203
Cdd:COG0790 80 PKDYEKALEWFEKAAEQGDAEAQYNLGLMYEEGLGVPQDYAKALEWYEKAAEQGDADAQYNLGLLYLNGEGVPKDPAKAA 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578835594 204 IYYTFGSAGGNMMSQMILGYRYLSGINVLQNCEVALSYYKKVadyiadtfeksegvpvekvrlterpenlssnseildwd 283
Cdd:COG0790 160 EWYRKAAEQGDADAQYNLGVLYENGRGVPKDPAKALEWYRKA-------------------------------------- 201
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 578835594 284 iyqyykflAERGDVQIQVSLGQLHLIGRkGLDQDYYKALHYFLKAAKA 331
Cdd:COG0790 202 --------AEQGDADAQYNLGRLYLNGE-GVEKDLEKALRWLRKAAEQ 240
|
|
| TPR |
COG0790 |
TPR repeat [General function prediction only]; |
498-625 |
2.73e-13 |
|
TPR repeat [General function prediction only];
Pssm-ID: 440553 [Multi-domain] Cd Length: 241 Bit Score: 69.96 E-value: 2.73e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578835594 498 SLVQYALLAEMGYEVAQSNSAFILESKKANILEKEKMYPMALLLWNRAAIQGNAFARVKIGDYHYYGYGTKKDYQTAATH 577
Cdd:COG0790 10 AAAAAAAALAAAAAAAGAAAAAAAAAAAAAALAAAAGAAAAAAAAAAAAAAGGAEAQYNLGLMYAEGRGVPKDYEKALEW 89
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 578835594 578 YSIAANKyHNAQAMFNLAYMYEHGLGITKDIHLARRLYDMAA-QTSPDA 625
Cdd:COG0790 90 FEKAAEQ-GDAEAQYNLGLMYEEGLGVPQDYAKALEWYEKAAeQGDADA 137
|
|
| Sel1 |
pfam08238 |
Sel1 repeat; This short repeat is found in the Sel1 protein. It is related to TPR repeats. |
588-620 |
1.56e-06 |
|
Sel1 repeat; This short repeat is found in the Sel1 protein. It is related to TPR repeats.
Pssm-ID: 429881 [Multi-domain] Cd Length: 35 Bit Score: 44.82 E-value: 1.56e-06
10 20 30
....*....|....*....|....*....|...
gi 578835594 588 AQAMFNLAYMYEHGLGITKDIHLARRLYDMAAQ 620
Cdd:pfam08238 1 AEAQYRLGYLYLYGLGVPKDPEKALEWYEKAAE 33
|
|
| SEL1 |
smart00671 |
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences. |
588-620 |
1.71e-06 |
|
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.
Pssm-ID: 214772 [Multi-domain] Cd Length: 36 Bit Score: 44.86 E-value: 1.71e-06
10 20 30
....*....|....*....|....*....|...
gi 578835594 588 AQAMFNLAYMYEHGLGITKDIHLARRLYDMAAQ 620
Cdd:smart00671 1 AEAQYNLGQMYEYGLGVPKDLEKALEYYKKAAE 33
|
|
| SEL1 |
smart00671 |
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences. |
407-441 |
2.48e-06 |
|
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.
Pssm-ID: 214772 [Multi-domain] Cd Length: 36 Bit Score: 44.47 E-value: 2.48e-06
10 20 30
....*....|....*....|....*....|....*
gi 578835594 407 PDAQFQLGFMYYSGSGIWKDYKLAFKYFYLASQSG 441
Cdd:smart00671 1 AEAQYNLGQMYEYGLGVPKDLEKALEYYKKAAELG 35
|
|
| SEL1 |
smart00671 |
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences. |
371-405 |
3.75e-06 |
|
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.
Pssm-ID: 214772 [Multi-domain] Cd Length: 36 Bit Score: 44.09 E-value: 3.75e-06
10 20 30
....*....|....*....|....*....|....*
gi 578835594 371 AIGLHGLGLLYFHGKGVPLNYAEALKYFQKAAEKG 405
Cdd:smart00671 1 AEAQYNLGQMYEYGLGVPKDLEKALEYYKKAAELG 35
|
|
| Sel1 |
pfam08238 |
Sel1 repeat; This short repeat is found in the Sel1 protein. It is related to TPR repeats. |
371-405 |
7.00e-06 |
|
Sel1 repeat; This short repeat is found in the Sel1 protein. It is related to TPR repeats.
Pssm-ID: 429881 [Multi-domain] Cd Length: 35 Bit Score: 43.28 E-value: 7.00e-06
10 20 30
....*....|....*....|....*....|....*
gi 578835594 371 AIGLHGLGLLYFHGKGVPLNYAEALKYFQKAAEKG 405
Cdd:pfam08238 1 AEAQYRLGYLYLYGLGVPKDPEKALEWYEKAAELG 35
|
|
| TPR |
COG0790 |
TPR repeat [General function prediction only]; |
531-620 |
4.20e-05 |
|
TPR repeat [General function prediction only];
Pssm-ID: 440553 [Multi-domain] Cd Length: 241 Bit Score: 45.69 E-value: 4.20e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578835594 531 KEKMYPMALLLWNRAAIQGNAFARVKIGDYHYYGYGTKKDYQTAATHYSIAANKYHNAQAMFNLAYMYEHGLGITKDIHL 610
Cdd:COG0790 6 AAAAAAAAAAAALAAAAAAAGAAAAAAAAAAAAAALAAAAGAAAAAAAAAAAAAAGGAEAQYNLGLMYAEGRGVPKDYEK 85
|
90
....*....|
gi 578835594 611 ARRLYDMAAQ 620
Cdd:COG0790 86 ALEWFEKAAE 95
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
18-128 |
5.88e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 46.55 E-value: 5.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578835594 18 IKTIKAEEHNKRQKERNVTTQVS-----VNEIKQYLSHILEQRTSSNV--------INKRENLLEKKKNQRKIRIKGIQN 84
Cdd:TIGR04523 309 NKELKSELKNQEKKLEEIQNQISqnnkiISQLNEQISQLKKELTNSESensekqreLEEKQNEIEKLKKENQSYKQEIKN 388
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 578835594 85 kdiLKRNKNHLQKQAEKNftDEGDQLFKMGIKVLQQSKSQKQKE 128
Cdd:TIGR04523 389 ---LESQINDLESKIQNQ--EKLNQQKDEQIKKLQQEKELLEKE 427
|
|
| SEL1 |
smart00671 |
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences. |
443-478 |
1.09e-04 |
|
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.
Pssm-ID: 214772 [Multi-domain] Cd Length: 36 Bit Score: 39.85 E-value: 1.09e-04
10 20 30
....*....|....*....|....*....|....*.
gi 578835594 443 PLAIYYLAKMYATGTGVVRSCRTAVELYKGVCELGH 478
Cdd:smart00671 1 AEAQYNLGQMYEYGLGVPKDLEKALEYYKKAAELGN 36
|
|
| Sel1 |
pfam08238 |
Sel1 repeat; This short repeat is found in the Sel1 protein. It is related to TPR repeats. |
407-441 |
1.92e-04 |
|
Sel1 repeat; This short repeat is found in the Sel1 protein. It is related to TPR repeats.
Pssm-ID: 429881 [Multi-domain] Cd Length: 35 Bit Score: 39.04 E-value: 1.92e-04
10 20 30
....*....|....*....|....*....|....*
gi 578835594 407 PDAQFQLGFMYYSGSGIWKDYKLAFKYFYLASQSG 441
Cdd:pfam08238 1 AEAQYRLGYLYLYGLGVPKDPEKALEWYEKAAELG 35
|
|
| SEL1 |
smart00671 |
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences. |
334-370 |
3.14e-03 |
|
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.
Pssm-ID: 214772 [Multi-domain] Cd Length: 36 Bit Score: 35.61 E-value: 3.14e-03
10 20 30
....*....|....*....|....*....|....*..
gi 578835594 334 ANAMAFIGKMYLEGNAaVPQNNATAFKYFSMAASKGN 370
Cdd:smart00671 1 AEAQYNLGQMYEYGLG-VPKDLEKALEYYKKAAELGN 36
|
|
| SEL1 |
smart00671 |
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences. |
551-586 |
4.27e-03 |
|
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.
Pssm-ID: 214772 [Multi-domain] Cd Length: 36 Bit Score: 35.23 E-value: 4.27e-03
10 20 30
....*....|....*....|....*....|....*.
gi 578835594 551 AFARVKIGDYHYYGYGTKKDYQTAATHYSIAANKYH 586
Cdd:smart00671 1 AEAQYNLGQMYEYGLGVPKDLEKALEYYKKAAELGN 36
|
|
| SEL1 |
smart00671 |
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences. |
216-247 |
9.20e-03 |
|
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.
Pssm-ID: 214772 [Multi-domain] Cd Length: 36 Bit Score: 34.46 E-value: 9.20e-03
10 20 30
....*....|....*....|....*....|..
gi 578835594 216 MSQMILGYRYLSGINVLQNCEVALSYYKKVAD 247
Cdd:smart00671 2 EAQYNLGQMYEYGLGVPKDLEKALEYYKKAAE 33
|
|
|