|
Name |
Accession |
Description |
Interval |
E-value |
| Mitofilin |
pfam09731 |
Mitochondrial inner membrane protein; Mitofilin controls mitochondrial cristae morphology. ... |
43-693 |
0e+00 |
|
Mitochondrial inner membrane protein; Mitofilin controls mitochondrial cristae morphology. Mitofilin is enriched in the narrow space between the inner boundary and the outer membranes, where it forms a homotypic interaction and assembles into a large multimeric protein complex. The first 78 amino acids contain a typical amino-terminal-cleavable mitochondrial presequence rich in positive-charged and hydroxylated residues and a membrane anchor domain. In addition, it has three centrally located coiled coil domains.
Pssm-ID: 430783 [Multi-domain] Cd Length: 618 Bit Score: 579.79 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 43 AGKIAGAGLLFVGGGIGGTILYAKWDSHFRESVEKTIPYSDKLFGMVLGSAPYTVPlpkKPIQSGPLKISSVSEVMTDS- 121
Cdd:pfam09731 4 FGKFFVALVLIVGVGYGGVVLYAYKDDNFRDFFEEYIPYGEEVVLYALGEDPPLAP---KPKTFRPLQPSVVSAVTGESk 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 122 ---ELPMAQTQETNGDTPASAAGDPAPEVEHEDTINTECPNTDEGTStfvtAALAKSLEDALNQTATVTRQTITAQNAAV 198
Cdd:pfam09731 81 epkEEKKQVKIPRQSGVSSEVAEEEKEATKDAAEAKAQLPKSEQEKE----KALEEVLKEAISKAESATAVAKEAKDDAI 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 199 QAVKAHSSTLKTAMDNSEIAGEKKSAQWRTVEGALKErrkavdeaadallkakeeleKMKTIIEDAKKREIAGATPYITA 278
Cdd:pfam09731 157 QAVKAHTDSLKEASDTAEISREKATDSALQKAEALAE--------------------KLKEVINLAKQSEEEAAPPLLDA 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 279 AEEKLHSMIVDLDSVVKKVQAAQSEAKVVSQYHELVVQARDDFRKELDSITPDITPGWKGMTGtLSTDDLNALIAHAHRR 358
Cdd:pfam09731 217 APETPPKLPEHLDNVEEKVEKAQSLAKLVDQYKELVASERIVFQQELVSIFPDIIPVLKEDNL-LSNDDLNSLIAHAHRE 295
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 359 IDQLNRELAQQKATEKQHIELALERQKlEEKRAFDSAVAKALEHHRS----EIQAEQDRKVEEVRDAMENEMRTQLRRQA 434
Cdd:pfam09731 296 IDQLSKKLAELKKREEKHIERALEKQK-EELDKLAEELSARLEEVRAadeaQLRLEFEREREEIRESYEEKLRTELERQA 374
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 435 AAHTDHLRDVLKVQEQELKFEFEQDLSEKLSEQElefhrrsqeqmDNFTLDINTAYARLRGIEQAVQSHAVAEEEARKAH 514
Cdd:pfam09731 375 EAHEEHLKDVLVEQEIELQREFLQDIKEKVEEER-----------AGRLLKLNELLANLKGLEKATSSHSEVEDENRKAQ 443
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 515 QLWLSVEALKYSMKTSSAEMPTIPLGSAVEAIRVSCSDNEFTQALTAAIPPESLTRGVYSEETLRARFYAVQKLAGRVAM 594
Cdd:pfam09731 444 QLWLAVEALRSTLEDGSADSRPRPLVRELKALKELASDDEVVKAALASLPEEAYQRGVYTEAALRERFRRVAKEVRKVSL 523
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 595 IDETKNSLYQYFLSYLQSLLLFPPKQlkppAELYPEDINTFKLLSYASYCIEHGDLELAAKFVNQLKGESRRVAQDWLKE 674
Cdd:pfam09731 524 IDPEGAGLLSHALSYLLSKLMFKPKQ----GEADPAGDDVESILARAEYYLEEGDLDSAAREMNSLKGWSKKLASDWLKE 599
|
650
....*....|....*....
gi 672049949 675 ARMTLETKQIVEILTTYAS 693
Cdd:pfam09731 600 ARRRLEVQQALELLQAEAA 618
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
194-545 |
2.03e-08 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 57.84 E-value: 2.03e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 194 QNAAVQAVKAHSS-TLKTAMDNSEIAGEKKSAQWRTVEGALK--ERRKAVDEAADALLKAKEELEKMKTIIEDAKKR--- 267
Cdd:PTZ00121 1268 RQAAIKAEEARKAdELKKAEEKKKADEAKKAEEKKKADEAKKkaEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAaea 1347
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 268 ---EIAGATPYITAAEEKLHSMIVDLDSVVKKVQAAQSEAKVVSQYHELVVQARDDFRKeldsitpditpgwkgmtgtls 344
Cdd:PTZ00121 1348 akaEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKK--------------------- 1406
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 345 TDDLNAlIAHAHRRIDQlnrelAQQKATEKQHIELAleRQKLEEKRAFDSAVAKALEHHRSE---IQAEQDRKVEEVRDA 421
Cdd:PTZ00121 1407 ADELKK-AAAAKKKADE-----AKKKAEEKKKADEA--KKKAEEAKKADEAKKKAEEAKKAEeakKKAEEAKKADEAKKK 1478
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 422 MENEMRT-QLRRQAAAHTDHLRDVLKVQEQELKFEFEQDLSEKLSEQELefhRRSQEQmdnftldintayarlRGIEQAV 500
Cdd:PTZ00121 1479 AEEAKKAdEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEA---KKAEEA---------------KKADEAK 1540
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 672049949 501 QSHAVAE-EEARKAHQLWLSVEALKYSMKTSSAEMPTIPLGSAVEA 545
Cdd:PTZ00121 1541 KAEEKKKaDELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEA 1586
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
197-516 |
2.80e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 57.25 E-value: 2.80e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 197 AVQAVKAHssTLKTAMDnsEIAGEKKSAQWRTVEGALKERRKAVDEAADALLKAKEELEKMKTIIEDAKKReiagatpyI 276
Cdd:COG1196 209 AEKAERYR--ELKEELK--ELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLE--------L 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 277 TAAEEKLHSMIVDLDSVVKKVQAAQSEAKVVSQYHELVVQARDDFRKELDSITPDITpgwkgmTGTLSTDDLNALIAHAH 356
Cdd:COG1196 277 EELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELE------ELEEELEELEEELEEAE 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 357 RRIDQLNRELAQQKAT--EKQHIELALERQKLEEKRAFDSAVAKALEHHRSEIQAEQDRKVEEVRDAMENEMRTQLRRQA 434
Cdd:COG1196 351 EELEEAEAELAEAEEAllEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEAL 430
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 435 AAHTDHLRDVLKVQEQELKFEFEQDLSEKLSEQELEFHRRS----QEQMDNFTLDINTAYARLRGIEQAVQSHAVAEEEA 510
Cdd:COG1196 431 AELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEaallEAALAELLEELAEAAARLLLLLEAEADYEGFLEGV 510
|
....*.
gi 672049949 511 RKAHQL 516
Cdd:COG1196 511 KAALLL 516
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
187-477 |
1.19e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 52.22 E-value: 1.19e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 187 TRQTITAQNAAVQAVKAHSSTLKTAmdnseiagekkSAQWRTVEGALKERRKAVDEAADALLKAKEELEKMKTIIEDAKK 266
Cdd:COG4913 666 AEREIAELEAELERLDASSDDLAAL-----------EEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQD 734
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 267 R----EIAGATPYITAAEEKLHSmiVDLDSVVKKVQA------AQSEAKVVSQYHELV--------------------VQ 316
Cdd:COG4913 735 RleaaEDLARLELRALLEERFAA--ALGDAVERELREnleeriDALRARLNRAEEELEramrafnrewpaetadldadLE 812
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 317 ARDDFRKELDSITPDITPG----WKGMTGTLSTDDLNAL-------IAHAHRRIDQLNRELAQQKATEKQHIELALERQK 385
Cdd:COG4913 813 SLPEYLALLDRLEEDGLPEyeerFKELLNENSIEFVADLlsklrraIREIKERIDPLNDSLKRIPFGPGRYLRLEARPRP 892
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 386 LEEKRAFDSAVAKALEHHRSEIQAEQDRKVEEVRDAMEnemrtQLRRQAAAHTDH-LRDVLKVQEQelkFEFEQDLSEKL 464
Cdd:COG4913 893 DPEVREFRQELRAVTSGASLFDEELSEARFAALKRLIE-----RLRSEEEESDRRwRARVLDVRNH---LEFDAEEIDRE 964
|
330
....*....|...
gi 672049949 465 SEQELEFHRRSQE 477
Cdd:COG4913 965 DGEEVETYSSSGG 977
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
188-502 |
1.77e-06 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 51.60 E-value: 1.77e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 188 RQTITAQNAAVQAVKAHSSTLKTAMDNSEIAGEKKSAQWRTVEGALKERRKAVDeaadALLKAKEELEKMKTIIEdakkR 267
Cdd:TIGR02168 683 EEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLA----RLEAEVEQLEERIAQLS----K 754
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 268 EIAGATPYITAAEEKLHSMIVDLDSVVKKVQAAQSEAKVVSQYHELVVQARDDFRKELDsitpditpgwkgmtgtlstdD 347
Cdd:TIGR02168 755 ELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELT--------------------L 814
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 348 LNALIAHAHRRIDQLNRELAqqkATEKQHIELALERQKLEEKRAFDSAV-----------AKALEHHrSEIQAEQDRKVE 416
Cdd:TIGR02168 815 LNEEAANLRERLESLERRIA---ATERRLEDLEEQIEELSEDIESLAAEieeleelieelESELEAL-LNERASLEEALA 890
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 417 EVRDAMENEM---------RTQLRRQAAAHTDHLRDvLKVQEQELKFEFEQdLSEKLSEQ---ELEFHrrsQEQMDNFTL 484
Cdd:TIGR02168 891 LLRSELEELSeelreleskRSELRRELEELREKLAQ-LELRLEGLEVRIDN-LQERLSEEyslTLEEA---EALENKIED 965
|
330
....*....|....*...
gi 672049949 485 DINTAYARLRGIEQAVQS 502
Cdd:TIGR02168 966 DEEEARRRLKRLENKIKE 983
|
|
| ARGLU |
pfam15346 |
Arginine and glutamate-rich 1; ARGLU, arginine and glutamate-rich 1 protein family, is ... |
381-515 |
1.28e-05 |
|
Arginine and glutamate-rich 1; ARGLU, arginine and glutamate-rich 1 protein family, is required for the oestrogen-dependent expression of ESR1 target genes. It functions in cooperation with MED1. The family of proteins is found in eukaryotes.
Pssm-ID: 405931 [Multi-domain] Cd Length: 151 Bit Score: 45.81 E-value: 1.28e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 381 LERQKLEE------KRAFDSAVAKALEHHRSEIQAEQDRKVEEVRDAMENEMRTQLRRQAAAhtdhlrdvlKVQEQELKF 454
Cdd:pfam15346 3 AESKLLEEetarrvEEAVAKRVEEELEKRKDEIEAEVERRVEEARKIMEKQVLEELEREREA---------ELEEERRKE 73
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 672049949 455 EFEQDLSEKLSEQELEFHRRSQEQMDNFTLDINTAYARLRGIEQAVQSHAVAEEEARKAHQ 515
Cdd:pfam15346 74 EEERKKREELERILEENNRKIEEAQRKEAEERLAMLEEQRRMKEERQRREKEEEEREKREQ 134
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
170-516 |
1.80e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 48.21 E-value: 1.80e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 170 AALAKSLEDALNQTATVTRQtitAQNAAVQAVKAHSSTLKTAMDNSEIAGEKKSAQWRTVEGALK--ERRKAVDEA---A 244
Cdd:PTZ00121 1324 AEEAKKKADAAKKKAEEAKK---AAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKkaEEKKKADEAkkkA 1400
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 245 DALLKAKEELEKM---KTIIEDAKKR--EIAGATPYITAAEEKLHSmivdlDSVVKKVQAAQ---------SEAKVVSQY 310
Cdd:PTZ00121 1401 EEDKKKADELKKAaaaKKKADEAKKKaeEKKKADEAKKKAEEAKKA-----DEAKKKAEEAKkaeeakkkaEEAKKADEA 1475
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 311 HELVVQAR--DDFRKELDSITPDITPGWKGMTGTLSTDDLNAliAHAHRRIDQLNRELAQQKATEKQHIE---------L 379
Cdd:PTZ00121 1476 KKKAEEAKkaDEAKKKAEEAKKKADEAKKAAEAKKKADEAKK--AEEAKKADEAKKAEEAKKADEAKKAEekkkadelkK 1553
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 380 ALERQKLEEKRAFDSAVAKALEHHRSEIQAEQDRKVEEVRDAMENEMRTQLRRQAAAHTDHLRDVLKVQEQELKFEFEQD 459
Cdd:PTZ00121 1554 AEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKK 1633
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 672049949 460 LSEKLSEQELEFHRRSQEqmdnftLDINTAYARLRGIEQAVQshavAEEEARKAHQL 516
Cdd:PTZ00121 1634 KVEQLKKKEAEEKKKAEE------LKKAEEENKIKAAEEAKK----AEEDKKKAEEA 1680
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
137-512 |
4.51e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 47.06 E-value: 4.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 137 ASAAGDPAPEVEHEDTINTECPNTDEGTSTFVTAALAKSLEDALNQTATVTRQTITAQNAAVQAVKAHSSTLKTAMDNSE 216
Cdd:PTZ00121 1380 ADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKA 1459
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 217 IAGEKKSAQWRTVEGALK--ERRKAVDEA----------ADALLKAKEELEKMKTI--------------IEDAKKREIA 270
Cdd:PTZ00121 1460 EEAKKKAEEAKKADEAKKkaEEAKKADEAkkkaeeakkkADEAKKAAEAKKKADEAkkaeeakkadeakkAEEAKKADEA 1539
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 271 GATPYITAAEEKLHSMIVDLDSVVKKVQAAQSEAKVVSQYHELVVQARDDFRKELDSITPDITPGWKGMTGTLSTDDLNA 350
Cdd:PTZ00121 1540 KKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAK 1619
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 351 LIAHAHRRIDQLNRELAQ---------------QKATEKQHIELALERQKLEEKRAFDSAVAKALEHHRSEIQAEQdRKV 415
Cdd:PTZ00121 1620 IKAEELKKAEEEKKKVEQlkkkeaeekkkaeelKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALK-KEA 1698
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 416 EEVRDAMENEMRTQLRRQAAAHTDHLRDVLKVQEQELKFEFEQDlseKLSEQELEFHRRSQEQMDNFTLDINTAYARLRG 495
Cdd:PTZ00121 1699 EEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEED---KKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRK 1775
|
410
....*....|....*..
gi 672049949 496 IEQAVQSHAVAEEEARK 512
Cdd:PTZ00121 1776 EKEAVIEEELDEEDEKR 1792
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
169-467 |
8.27e-05 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 45.98 E-value: 8.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 169 TAALAKSLEDALNQTATVTRQTITAQNAAVQAVKAHSSTLKTAMdnseiagekkSAQWRTVEGALKERRKAVDEAADAL- 247
Cdd:pfam12128 673 LAERKDSANERLNSLEAQLKQLDKKHQAWLEEQKEQKREARTEK----------QAYWQVVEGALDAQLALLKAAIAARr 742
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 248 LKAKEELEKMKTiiedAKKREIAGATPyitaAEEKLHSMIVDLDSVVKKV-QAAQSEAKVVSQ---YHELVVQARDDFRK 323
Cdd:pfam12128 743 SGAKAELKALET----WYKRDLASLGV----DPDVIAKLKREIRTLERKIeRIAVRRQEVLRYfdwYQETWLQRRPRLAT 814
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 324 ELDSITPDITPgwkgmtgtlSTDDLNALIAHAHRRIDQLNRELaqqKATEKQHIELALERQKLeekRAFDSAVAKALEHH 403
Cdd:pfam12128 815 QLSNIERAISE---------LQQQLARLIADTKLRRAKLEMER---KASEKQQVRLSENLRGL---RCEMSKLATLKEDA 879
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 672049949 404 RSE----IQAEQDRKVEEVRDAMENEMrtqlrRQAAAHTDHLRDVLKVQEQELKFEFEQDLSEKLSEQ 467
Cdd:pfam12128 880 NSEqaqgSIGERLAQLEDLKLKRDYLS-----ESVKKYVEHFKNVIADHSGSGLAETWESLREEDHYQ 942
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
234-518 |
8.34e-05 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 46.08 E-value: 8.34e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 234 KERRKAVDEAA----------DALLK---AKEELEKMKTIIED--------AKKREIAGAtpYITAAEEKlhsMIVDLDS 292
Cdd:COG1196 155 EERRAIIEEAAgiskykerkeEAERKleaTEENLERLEDILGElerqleplERQAEKAER--YRELKEEL---KELEAEL 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 293 VVKKVQAAQSEAKVVSQYHELVVQARDDFRKELDSITPDItpgwkgmtgTLSTDDLNALIAHAHRRIDQLNRELAQQKAT 372
Cdd:COG1196 230 LLLKLRELEAELEELEAELEELEAELEELEAELAELEAEL---------EELRLELEELELELEEAQAEEYELLAELARL 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 373 EKQHIELALERQKLEEKRAFDSAVAKALEHHRSEIQAEQDRKVEEVRDAMENEMRTQLRRQAAAHTDHLRDVLKVQEQEL 452
Cdd:COG1196 301 EQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEE 380
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 672049949 453 KFEFEQDLSEKLSEQELEfhRRSQEQMDNFTLDINTAYARLRGIEQAVQSHAVAEEEARKAHQLWL 518
Cdd:COG1196 381 LEELAEELLEALRAAAEL--AAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEAL 444
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
232-515 |
8.95e-05 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 45.82 E-value: 8.95e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 232 ALKERRKAVDEAADALLKAKEELEKMKTIIEDAKKrEIAGATPYITAAEEKLHSMIVDLDSVVKKVQAAQSEAKVVSQYH 311
Cdd:TIGR02168 678 EIEELEEKIEELEEKIAELEKALAELRKELEELEE-ELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKEL 756
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 312 ELVVQARDDFRKELDSITPDITPGWKGMtgtlstDDLNALIAHAHRRIDQLNRELaqqKATEKQHIELALERQKLEEKRA 391
Cdd:TIGR02168 757 TELEAEIEELEERLEEAEEELAEAEAEI------EELEAQIEQLKEELKALREAL---DELRAELTLLNEEAANLRERLE 827
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 392 FDSAVAKALEHHRSEIQAEQDRK---VEEVRDAMEnEMRTQLRRQAAAHTDHL--RDVLKVQEQELKFEFEqDLSEKLSE 466
Cdd:TIGR02168 828 SLERRIAATERRLEDLEEQIEELsedIESLAAEIE-ELEELIEELESELEALLneRASLEEALALLRSELE-ELSEELRE 905
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 672049949 467 QELEFHR------RSQEQMDNFTLDINTAYARLRGIEQAVQSHAVAEEEARKAHQ 515
Cdd:TIGR02168 906 LESKRSElrreleELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALE 960
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
264-515 |
1.54e-04 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 45.05 E-value: 1.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 264 AKKREIAGATPYITAAEEKLHsmivdldsvvkkvqAAQSEAKVVSQYHELVVQARDDFRKELDSITPDItpgwkgmtgtl 343
Cdd:TIGR02168 674 ERRREIEELEEKIEELEEKIA--------------ELEKALAELRKELEELEEELEQLRKELEELSRQI----------- 728
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 344 stDDLNALIAHAHRRIDQLNRELAQQKATEKqhiELALERQKLEEKRAFDSAVAKALEHHRseiqAEQDRKVEEVRDAME 423
Cdd:TIGR02168 729 --SALRKDLARLEAEVEQLEERIAQLSKELT---ELEAEIEELEERLEEAEEELAEAEAEI----EELEAQIEQLKEELK 799
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 424 NEmRTQLRRQAAAHTDHLRDVLKVQEQELKFEFEQDLSEKLSEQELEFHRRSQEQMDNFTLDINTAYARLRGIEQAVQSH 503
Cdd:TIGR02168 800 AL-REALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEAL 878
|
250
....*....|....*
gi 672049949 504 AV---AEEEARKAHQ 515
Cdd:TIGR02168 879 LNeraSLEEALALLR 893
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
193-533 |
1.62e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 45.13 E-value: 1.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 193 AQNAAVQAVKAHSSTLKTAMDNSEIAGEKKSAQWRTVEGALKERRKAVDEAADALLKAKEELEKMKTI---IEDAKKREI 269
Cdd:PTZ00121 1089 ADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEARKAEDAKRVEIarkAEDARKAEE 1168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 270 AGATPYITAAEEKLHSMIVDLDSVVKKVQAAQsEAKVVSQYHElvVQARDDFRKELDSitpditpgwkgmtgtlstddln 349
Cdd:PTZ00121 1169 ARKAEDAKKAEAARKAEEVRKAEELRKAEDAR-KAEAARKAEE--ERKAEEARKAEDA---------------------- 1223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 350 aliahahRRIDQLNR-ELAQQKATEKQHIElalERQKLEEKRAFDSAVAKALEHHRSEIQAEQDRKVEEVRDAMENEMRT 428
Cdd:PTZ00121 1224 -------KKAEAVKKaEEAKKDAEEAKKAE---EERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKAD 1293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 429 QLRRQaaahtdhlRDVLKVQEQELKFEfEQDLSEKLSEQELEFHRRSQEQMDNFTLDINTAYARlRGIEQAVQSHAVAEE 508
Cdd:PTZ00121 1294 EAKKA--------EEKKKADEAKKKAE-EAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAA-KAEAEAAADEAEAAE 1363
|
330 340
....*....|....*....|....*
gi 672049949 509 EARKAHQLWLSVEALKYSMKTSSAE 533
Cdd:PTZ00121 1364 EKAEAAEKKKEEAKKKADAAKKKAE 1388
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
170-470 |
9.79e-04 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 42.62 E-value: 9.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 170 AALAKSLEDALNQTATVTRQTITAQNAAVQAVKAHSSTLKTAMDNSEIAG----EKKSAQWRTVEGAL-------KERRK 238
Cdd:COG1196 459 EALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEgvkaALLLAGLRGLAGAVavligveAAYEA 538
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 239 AVDEAADALLKAK--EELEKMKTIIEDAKKREIAGAT--PYITAAEEKLHSMIVDLDSVVKKVQAAQSEAkvvsQYHELV 314
Cdd:COG1196 539 ALEAALAAALQNIvvEDDEVAAAAIEYLKAAKAGRATflPLDKIRARAALAAALARGAIGAAVDLVASDL----READAR 614
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 315 VQARDDFRKELDSITPDITPGWKGMTGTLSTDDLNALIAHAHRRIDQLNRELAQQKATEKQHIELALERQKLEEKRAFDS 394
Cdd:COG1196 615 YYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELE 694
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 672049949 395 AVAKALEHHRSEIQAEQDRKVEEVRDAMENEMRTQLRRQAAAHTDHLRDVLKVQEQELKFEFEQDLSEKLSEQELE 470
Cdd:COG1196 695 LEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELE 770
|
|
| HMMR_N |
pfam15905 |
Hyaluronan mediated motility receptor N-terminal; HMMR_N is the N-terminal region of ... |
322-477 |
1.88e-03 |
|
Hyaluronan mediated motility receptor N-terminal; HMMR_N is the N-terminal region of eukaryotic hyaluronan-mediated motility receptor proteins. The protein is functionally associated with BRCA1 and thus predicted to be a common, low-penetrance breast cancer candidate.
Pssm-ID: 464932 [Multi-domain] Cd Length: 329 Bit Score: 40.95 E-value: 1.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 322 RKELDSITPDITPGWKGMTGTLSTDDLNalIAHAHRRIDQLNRELaqqKATEKQHIELALERQKLEEKRAFDSAVAKALE 401
Cdd:pfam15905 165 RNKLEAKMKEVMAKQEGMEGKLQVTQKN--LEHSKGKVAQLEEKL---VSTEKEKIEEKSETEKLLEYITELSCVSEQVE 239
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 672049949 402 HHRSEIQaeqdrKVEEVRDAMENEMRTqLRRQAAAHTDHLRDVLKVQEQELKfEFEQDLSEKLSEQELEFHRRSQE 477
Cdd:pfam15905 240 KYKLDIA-----QLEELLKEKNDEIES-LKQSLEEKEQELSKQIKDLNEKCK-LLESEKEELLREYEEKEQTLNAE 308
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
279-496 |
1.88e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.82 E-value: 1.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 279 AEEKLHSMIVDLDSVVKKVQAAQSEAKVVSQYHELVVQARDDFRKELDsitpditpgwkgmtgtLSTDDLNalIAHAHRR 358
Cdd:COG4913 608 NRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAE----------------YSWDEID--VASAERE 669
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 359 IDQLNRELAQQKATEKQHIELALERQKLEEKRafdsavaKALEHHRSEIQAEQDRKVEEvrdamenemRTQLRRQAAAHT 438
Cdd:COG4913 670 IAELEAELERLDASSDDLAALEEQLEELEAEL-------EELEEELDELKGEIGRLEKE---------LEQAEEELDELQ 733
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 672049949 439 DHLRDVLKVQEQELKFEFEQDLSE-KLSEQELEFHRRSQEQMDNFTLDINTAYARLRGI 496
Cdd:COG4913 734 DRLEAAEDLARLELRALLEERFAAaLGDAVERELRENLEERIDALRARLNRAEEELERA 792
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
360-515 |
1.96e-03 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 41.49 E-value: 1.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 360 DQLNRELAQQKATEKQHIELALERQKLEEKRAFDSAVAKALEHHRSEIQAEQDRKVEEVRDAMENEMRTQLRRQAAAH-- 437
Cdd:TIGR00618 256 LKKQQLLKQLRARIEELRAQEAVLEETQERINRARKAAPLAAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHvk 335
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 438 -------TDHLRDVLKVQEQELKFEFEQDLS---EKLSEQELEFHRRSQEQMDNFTLDINTAYARLRGIEQAVQSHAVAE 507
Cdd:TIGR00618 336 qqssieeQRRLLQTLHSQEIHIRDAHEVATSireISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKELDILQREQATIDTR 415
|
....*...
gi 672049949 508 EEARKAHQ 515
Cdd:TIGR00618 416 TSAFRDLQ 423
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
237-458 |
2.31e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.44 E-value: 2.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 237 RKAVDEAADALLKAKEELEKMKTIIEDAK-KREIAGATPYITAAEEKLHSMIVDLDSVVKKVQAAQSEAKVvsqyhELVV 315
Cdd:COG4913 220 EPDTFEAADALVEHFDDLERAHEALEDAReQIELLEPIRELAERYAAARERLAELEYLRAALRLWFAQRRL-----ELLE 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 316 QARDDFRKELDSITPDItpgwkgmtgtlstDDLNALIAHAHRRIDQLNRELAQQKATEKQHIE-----LALERQKLEEKR 390
Cdd:COG4913 295 AELEELRAELARLEAEL-------------ERLEARLDALREELDELEAQIRGNGGDRLEQLEreierLERELEERERRR 361
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 391 AFDSAVAKALEHHRSEIQAEQDRKVEEVRDAME--NEMRTQLRRQAAAHTDHLRDvLKVQEQELKFEFEQ 458
Cdd:COG4913 362 ARLEALLAALGLPLPASAEEFAALRAEAAALLEalEEELEALEEALAEAEAALRD-LRRELRELEAEIAS 430
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
346-517 |
2.98e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 40.91 E-value: 2.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 346 DDLNALIAHAHRRIDQLNRELAQQKATEKQHIELALERQKLEEKRAFDSAVAKALEHHRSEIQAEQDRKVEEVR-DAMEN 424
Cdd:COG4717 74 KELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLYQELEALEAELAELPERlEELEE 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 425 EMRTqlRRQAAAHTDHLRDVLKVQEQELKFEFEQDLSEKLSEQE--LEFHRRSQEQMDNFTLDINTAYARLRGIEQAVQS 502
Cdd:COG4717 154 RLEE--LRELEEELEELEAELAELQEELEELLEQLSLATEEELQdlAEELEELQQRLAELEEELEEAQEELEELEEELEQ 231
|
170
....*....|....*
gi 672049949 503 HAVAEEEARKAHQLW 517
Cdd:COG4717 232 LENELEAAALEERLK 246
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
346-514 |
3.03e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 41.21 E-value: 3.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 346 DDLNALIAHAHRRIDQLNRELAQQKAtekqhiELALERQKLEEKRAFDSAVAKALEHHRSEIQ------AEQDRKVEEVR 419
Cdd:TIGR02169 705 DELSQELSDASRKIGEIEKEIEQLEQ------EEEKLKERLEELEEDLSSLEQEIENVKSELKeleariEELEEDLHKLE 778
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 420 DAMEN-----------EMRTQLRRQAAAHTDhLRDVLKVQEQEL-KFEFEQDLSEKLSEQELEFHRRSQEQMDNFTLDIN 487
Cdd:TIGR02169 779 EALNDlearlshsripEIQAELSKLEEEVSR-IEARLREIEQKLnRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIE 857
|
170 180
....*....|....*....|....*..
gi 672049949 488 TAYARLRGIEQAVQSHAVAEEEARKAH 514
Cdd:TIGR02169 858 NLNGKKEELEEELEELEAALRDLESRL 884
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
223-475 |
3.36e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.52 E-value: 3.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 223 SAQWRTVEGALKERRKAVDEAADALLKAKEELEKMKTIIEDAKKReIAGATPYITAAEEKLHSMIVDLDSVVKKVQAAQs 302
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERR-IAALARRIRALEQELAALEAELAELEKEIAELR- 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 303 eAKVVSQYHELVVQARDDFRKELDSitpditpgwkGMTGTLSTDDLNALIAHAhRRIDQLNRELAQQ-KATEKQHIELAL 381
Cdd:COG4942 97 -AELEAQKEELAELLRALYRLGRQP----------PLALLLSPEDFLDAVRRL-QYLKYLAPARREQaEELRADLAELAA 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 382 ERQKLEEKRAFDSAVAKALEHHRSEIQAEQDRKveevrdameNEMRTQLRRQAAAHTDHLRDvLKVQEQELkfefeQDLS 461
Cdd:COG4942 165 LRAELEAERAELEALLAELEEERAALEALKAER---------QKLLARLEKELAELAAELAE-LQQEAEEL-----EALI 229
|
250
....*....|....
gi 672049949 462 EKLSEQELEFHRRS 475
Cdd:COG4942 230 ARLEAEAAAAAERT 243
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
229-418 |
3.46e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 39.52 E-value: 3.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 229 VEGALKERRKAVDEAADALLKAKEELEKMKTIIEDAkKREIAgatpyitaaeeKLHSMIVDLDSVVKKVQAAQSEAKVVS 308
Cdd:COG1579 22 LEHRLKELPAELAELEDELAALEARLEAAKTELEDL-EKEIK-----------RLELEIEEVEARIKKYEEQLGNVRNNK 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 309 QYHELvvqarddfRKELDSITPDItpgwkgmtgtlstDDLNALIAHAHRRIDQLNRELAQQKAtekqhiELALERQKLEE 388
Cdd:COG1579 90 EYEAL--------QKEIESLKRRI-------------SDLEDEILELMERIEELEEELAELEA------ELAELEAELEE 142
|
170 180 190
....*....|....*....|....*....|.
gi 672049949 389 KRA-FDSAVAKaLEHHRSEIQAEQDRKVEEV 418
Cdd:COG1579 143 KKAeLDEELAE-LEAELEELEAEREELAAKI 172
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
364-537 |
4.31e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 40.49 E-value: 4.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 364 RELAQQKATEKQHIELA-LERQKLEEKRAFDSAVAKALEHHRSEIQAEQDRKVEEVRDAMENEMRTqlRRQAAAHTDHLR 442
Cdd:pfam17380 438 RRLEEERAREMERVRLEeQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKELEE--RKQAMIEEERKR 515
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 443 DVLK---------VQEQELKFEFEQdlsEKLSEQELEFHRRSQEQMDNFTLDINTAYARLRgiEQAVQSHAVAEEEARKA 513
Cdd:pfam17380 516 KLLEkemeerqkaIYEEERRREAEE---ERRKQQEMEERRRIQEQMRKATEERSRLEAMER--EREMMRQIVESEKARAE 590
|
170 180
....*....|....*....|....*.
gi 672049949 514 HQLWLSVEALK--YSMKTSSAEMPTI 537
Cdd:pfam17380 591 YEATTPITTIKpiYRPRISEYQPPDV 616
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
346-515 |
5.23e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 40.28 E-value: 5.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 346 DDLNAL---IAHAHRRIDQL-----NRELAQQKATEKQHIELALERQKLEEKRAFDSAVAKALEHHRSEIQAEQDRK--- 414
Cdd:COG4913 235 DDLERAheaLEDAREQIELLepireLAERYAAARERLAELEYLRAALRLWFAQRRLELLEAELEELRAELARLEAELerl 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672049949 415 ------VEEVRDAMENEMR-------TQLRRQAAAHTDHLRDVLKVQEQelkfeFEQ-----DLSEKLSEQEL-EFHRRS 475
Cdd:COG4913 315 earldaLREELDELEAQIRgnggdrlEQLEREIERLERELEERERRRAR-----LEAllaalGLPLPASAEEFaALRAEA 389
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 672049949 476 QEQMDNFTldintayARLRGIEQAVQSHAVAEEEARKAHQ 515
Cdd:COG4913 390 AALLEALE-------EELEALEEALAEAEAALRDLRRELR 422
|
|
| |
