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Conserved domains on  [gi|755492816|ref|XP_011236908|]
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DBF4-type zinc finger-containing protein 2 homolog isoform X1 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
LELP1 super family cl25930
Late cornified envelope-like proline-rich protein 1; This family of uncharacterized proteins ...
 2281-2335 8.15e-05

Late cornified envelope-like proline-rich protein 1; This family of uncharacterized proteins is found in mammals.


The actual alignment was detected with superfamily member pfam15042:

Pssm-ID: 464464 [Multi-domain]  Cd Length: 106  Bit Score: 43.88  E-value: 8.15e-05
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 755492816  2281 CTPraPCPPraLCTPraPCPPralctpraPCPPRALRAPCPPRalCSPraPCPPR 2335
Cdd:pfam15042   70 TSP--LCPP--LCSP--RCPP--------SCPQKGCVKPCPPK--CPS--PCLPR 106
ZnF_DBF super family cl46924
Zinc finger in DBF-like proteins;
3-34 2.06e-04

Zinc finger in DBF-like proteins;


The actual alignment was detected with superfamily member smart00586:

Pssm-ID: 128854 [Multi-domain]  Cd Length: 49  Bit Score: 40.92  E-value: 2.06e-04
                            10        20        30
                    ....*....|....*....|....*....|..
gi 755492816      3 KRQGYCSYCRVQYTNLEQHLFSSQHRSLTRQS 34
Cdd:smart00586    3 KKPGYCENCREKYDDLETHLLSEKHRRFAENN 34
 
Name Accession Description Interval E-value
LELP1 pfam15042
Late cornified envelope-like proline-rich protein 1; This family of uncharacterized proteins ...
 2281-2335 8.15e-05

Late cornified envelope-like proline-rich protein 1; This family of uncharacterized proteins is found in mammals.


Pssm-ID: 464464 [Multi-domain]  Cd Length: 106  Bit Score: 43.88  E-value: 8.15e-05
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 755492816  2281 CTPraPCPPraLCTPraPCPPralctpraPCPPRALRAPCPPRalCSPraPCPPR 2335
Cdd:pfam15042   70 TSP--LCPP--LCSP--RCPP--------SCPQKGCVKPCPPK--CPS--PCLPR 106
ZnF_DBF smart00586
Zinc finger in DBF-like proteins;
3-34 2.06e-04

Zinc finger in DBF-like proteins;


Pssm-ID: 128854 [Multi-domain]  Cd Length: 49  Bit Score: 40.92  E-value: 2.06e-04
                            10        20        30
                    ....*....|....*....|....*....|..
gi 755492816      3 KRQGYCSYCRVQYTNLEQHLFSSQHRSLTRQS 34
Cdd:smart00586    3 KKPGYCENCREKYDDLETHLLSEKHRRFAENN 34
zf-DBF pfam07535
DBF zinc finger; This domain is predicted to bind metal ions and is often found associated ...
 6-29 6.67e-04

DBF zinc finger; This domain is predicted to bind metal ions and is often found associated with pfam00533 and pfam02178. It was first identified in the Drosophila chiffon gene product, and is associated with initiation of DNA replication.


Pssm-ID: 462197  Cd Length: 42  Bit Score: 39.40  E-value: 6.67e-04
                           10        20
                   ....*....|....*....|....
gi 755492816     6 GYCSYCRVQYTNLEQHLFSSQHRS 29
Cdd:pfam07535    1 GYCENCRVKYEDLEEHIVSEKHRK 24
PTZ00449 PTZ00449
104 kDa microneme/rhoptry antigen; Provisional
 2283-2335 1.49e-03

104 kDa microneme/rhoptry antigen; Provisional


Pssm-ID: 185628 [Multi-domain]  Cd Length: 943  Bit Score: 43.91  E-value: 1.49e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 755492816 2283 PRAPCPPRALCTPRAPCPPRALCTPRAPCPPRALRAPCPPRalcSPRAPCPPR 2335
Cdd:PTZ00449  621 PKSPKRPESPKSPKRPPPPQRPSSPERPEGPKIIKSPKPPK---SPKPPFDPK 670
 
Name Accession Description Interval E-value
LELP1 pfam15042
Late cornified envelope-like proline-rich protein 1; This family of uncharacterized proteins ...
 2281-2335 8.15e-05

Late cornified envelope-like proline-rich protein 1; This family of uncharacterized proteins is found in mammals.


Pssm-ID: 464464 [Multi-domain]  Cd Length: 106  Bit Score: 43.88  E-value: 8.15e-05
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 755492816  2281 CTPraPCPPraLCTPraPCPPralctpraPCPPRALRAPCPPRalCSPraPCPPR 2335
Cdd:pfam15042   70 TSP--LCPP--LCSP--RCPP--------SCPQKGCVKPCPPK--CPS--PCLPR 106
ZnF_DBF smart00586
Zinc finger in DBF-like proteins;
3-34 2.06e-04

Zinc finger in DBF-like proteins;


Pssm-ID: 128854 [Multi-domain]  Cd Length: 49  Bit Score: 40.92  E-value: 2.06e-04
                            10        20        30
                    ....*....|....*....|....*....|..
gi 755492816      3 KRQGYCSYCRVQYTNLEQHLFSSQHRSLTRQS 34
Cdd:smart00586    3 KKPGYCENCREKYDDLETHLLSEKHRRFAENN 34
zf-DBF pfam07535
DBF zinc finger; This domain is predicted to bind metal ions and is often found associated ...
 6-29 6.67e-04

DBF zinc finger; This domain is predicted to bind metal ions and is often found associated with pfam00533 and pfam02178. It was first identified in the Drosophila chiffon gene product, and is associated with initiation of DNA replication.


Pssm-ID: 462197  Cd Length: 42  Bit Score: 39.40  E-value: 6.67e-04
                           10        20
                   ....*....|....*....|....
gi 755492816     6 GYCSYCRVQYTNLEQHLFSSQHRS 29
Cdd:pfam07535    1 GYCENCRVKYEDLEEHIVSEKHRK 24
PTZ00449 PTZ00449
104 kDa microneme/rhoptry antigen; Provisional
 2283-2335 1.49e-03

104 kDa microneme/rhoptry antigen; Provisional


Pssm-ID: 185628 [Multi-domain]  Cd Length: 943  Bit Score: 43.91  E-value: 1.49e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 755492816 2283 PRAPCPPRALCTPRAPCPPRALCTPRAPCPPRALRAPCPPRalcSPRAPCPPR 2335
Cdd:PTZ00449  621 PKSPKRPESPKSPKRPPPPQRPSSPERPEGPKIIKSPKPPK---SPKPPFDPK 670
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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