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Conserved domains on  [gi|755566531|ref|XP_011246120|]
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serine/threonine-protein phosphatase with EF-hands 1 isoform X1 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
MPP_RdgC cd07420
Drosophila melanogaster RdgC and related proteins, metallophosphatase domain; RdgC (retinal ...
144-479 0e+00

Drosophila melanogaster RdgC and related proteins, metallophosphatase domain; RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.


:

Pssm-ID: 277364 [Multi-domain]  Cd Length: 297  Bit Score: 605.17  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 144 PLTFTDIHILLQAFKQQQILHAHYVLEVLFEARKVLKQMPNFSHVKTFPAKEITICGDLHGKLDDLMLIFYKNGLPSENN 223
Cdd:cd07420    1 PLTKTHIDLLIEAFKLKQRLHAKYVLLILREARKSLKQLPNISRVSTSYSKEVTICGDLHGKLDDLLLIFYKNGLPSPEN 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 224 PYVFNGDFVDRGNNSMEILMILLVCFLVYPSDLHLNRGNHEDFMMNLRYGFTKEILQKYKLHGRKILQVLEEVYTWLPIG 303
Cdd:cd07420   81 PYVFNGDFVDRGKRSIEILMILFAFVLVYPNAVHLNRGNHEDHIMNLRYGFTKEVMQKYKDHGKKILRLLEDVFSWLPLA 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 304 TIIDNEILVIHGGISESTDLNTLHQLQRNKMKSvlmppvlgnqetgekrnksasnyveprkvepdktpsedlTKQEWEQI 383
Cdd:cd07420  161 TIIDNKVLVVHGGISDSTDLDLLDKIDRHKYVS---------------------------------------TKTEWQQV 201
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 384 VDILWSDPRGKKGCYPNTSRGGGCYFGPDVTSKVLSKNQLKMLIRSHECKPDGYEVSHDGKVITVFSASNYYEEGSNRGA 463
Cdd:cd07420  202 VDILWSDPKATKGCKPNTFRGGGCYFGPDVTSQFLQKHGLSLLIRSHECKPEGYEFCHNNKVITIFSASNYYEEGSNRGA 281
                        330
                 ....*....|....*.
gi 755566531 464 YIRLSYGTMPQFFQYQ 479
Cdd:cd07420  282 YVKLGPQLTPHFVQYQ 297
FRQ1 COG5126
Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms];
511-671 8.58e-14

Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms];


:

Pssm-ID: 444056 [Multi-domain]  Cd Length: 137  Bit Score: 68.67  E-value: 8.58e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 511 RKTDLINAFELRDHSRSGRISLAEWAFSMENIlglnlpWRSLSSHLVTiDSSGSVdymsSFDDIRiekptKDMKSNLTET 590
Cdd:COG5126    3 QRRKLDRRFDLLDADGDGVLERDDFEALFRRL------WATLFSEADT-DGDGRI----SREEFV-----AGMESLFEAT 66
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 591 MyryRSDLKIIFNIIDSDQSGLISMDEFRTMWKLFNahykahIDDSQIDELASIVDFNKDGNIDFNEFLKAfyvVHKYDK 670
Cdd:COG5126   67 V---EPFARAAFDLLDTDGDGKISADEFRRLLTALG------VSEEEADELFARLDTDGDGKISFEEFVAA---VRDYYT 134

                 .
gi 755566531 671 P 671
Cdd:COG5126  135 P 135
 
Name Accession Description Interval E-value
MPP_RdgC cd07420
Drosophila melanogaster RdgC and related proteins, metallophosphatase domain; RdgC (retinal ...
144-479 0e+00

Drosophila melanogaster RdgC and related proteins, metallophosphatase domain; RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.


Pssm-ID: 277364 [Multi-domain]  Cd Length: 297  Bit Score: 605.17  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 144 PLTFTDIHILLQAFKQQQILHAHYVLEVLFEARKVLKQMPNFSHVKTFPAKEITICGDLHGKLDDLMLIFYKNGLPSENN 223
Cdd:cd07420    1 PLTKTHIDLLIEAFKLKQRLHAKYVLLILREARKSLKQLPNISRVSTSYSKEVTICGDLHGKLDDLLLIFYKNGLPSPEN 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 224 PYVFNGDFVDRGNNSMEILMILLVCFLVYPSDLHLNRGNHEDFMMNLRYGFTKEILQKYKLHGRKILQVLEEVYTWLPIG 303
Cdd:cd07420   81 PYVFNGDFVDRGKRSIEILMILFAFVLVYPNAVHLNRGNHEDHIMNLRYGFTKEVMQKYKDHGKKILRLLEDVFSWLPLA 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 304 TIIDNEILVIHGGISESTDLNTLHQLQRNKMKSvlmppvlgnqetgekrnksasnyveprkvepdktpsedlTKQEWEQI 383
Cdd:cd07420  161 TIIDNKVLVVHGGISDSTDLDLLDKIDRHKYVS---------------------------------------TKTEWQQV 201
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 384 VDILWSDPRGKKGCYPNTSRGGGCYFGPDVTSKVLSKNQLKMLIRSHECKPDGYEVSHDGKVITVFSASNYYEEGSNRGA 463
Cdd:cd07420  202 VDILWSDPKATKGCKPNTFRGGGCYFGPDVTSQFLQKHGLSLLIRSHECKPEGYEFCHNNKVITIFSASNYYEEGSNRGA 281
                        330
                 ....*....|....*.
gi 755566531 464 YIRLSYGTMPQFFQYQ 479
Cdd:cd07420  282 YVKLGPQLTPHFVQYQ 297
PP2Ac smart00156
Protein phosphatase 2A homologues, catalytic domain; Large family of serine/threonine ...
163-482 3.76e-106

Protein phosphatase 2A homologues, catalytic domain; Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.


Pssm-ID: 197547 [Multi-domain]  Cd Length: 271  Bit Score: 323.01  E-value: 3.76e-106
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531   163 LHAHYVLEVLFEARKVLKQMPNFSHVktfpAKEITICGDLHGKLDDLMLIFYKNGLPSENNpYVFNGDFVDRGNNSMEIL 242
Cdd:smart00156   1 LYKEEILELLREVKEIFRQEPNLVEV----SAPVTVCGDIHGQFDDLLRLFDKNGQPPETN-YVFLGDYVDRGPFSIEVI 75
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531   243 MILLVCFLVYPSDLHLNRGNHEDFMMNLRYGFTKEILQKYklhGRKILQVLEEVYTWLPIGTIIDNEILVIHGGISEstD 322
Cdd:smart00156  76 LLLFALKILYPNRIVLLRGNHESRSMNEIYGFYDECKRKY---GERIYEKFNEAFSWLPLAALINGKILCMHGGLSP--D 150
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531   323 LNTLHQLqrNKMKSVLMPPvlgnqetgekrnksasnyveprkvepdktpsedltkqEWEQIVDILWSDPRGKKGCYPNTS 402
Cdd:smart00156 151 LTTLDDI--RKLKRPQEPP-------------------------------------DDGLLIDLLWSDPDQPVNGFGPSI 191
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531   403 RGGGCYFGPDVTSKVLSKNQLKMLIRSHECKPDGYEVSHDGKVITVFSASNYYEEGSNRGAYIRLSYGTMPQFFQYQVTS 482
Cdd:smart00156 192 RGASYIFGPDAVDEFLKKNNLKLIIRAHQVVDDGYEFFADGKLVTIFSAPNYCDRFGNKAAVLKVDKDLKLTFEQFKPGK 271
PTZ00480 PTZ00480
serine/threonine-protein phosphatase; Provisional
196-475 2.06e-37

serine/threonine-protein phosphatase; Provisional


Pssm-ID: 185658 [Multi-domain]  Cd Length: 320  Bit Score: 142.11  E-value: 2.06e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 196 ITICGDLHGKLDDLMLIFYKNGLPSENNpYVFNGDFVDRGNNSMEILMILLVCFLVYPSDLHLNRGNHEDFMMNLRYGFT 275
Cdd:PTZ00480  61 LKICGDVHGQYFDLLRLFEYGGYPPESN-YLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFY 139
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 276 KEILQKYKLhgrKILQVLEEVYTWLPIGTIIDNEILVIHGGIseSTDLNTLHQLQrnkmksvlmppvlgnqetgekrnks 355
Cdd:PTZ00480 140 DECKRRYTI---KLWKTFTDCFNCLPVAALIDEKILCMHGGL--SPELSNLEQIR------------------------- 189
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 356 asnyvepRKVEPDKTPSEDLtkqeweqIVDILWSDPRGKKGCYPNTSRGGGCYFGPDVTSKVLSKNQLKMLIRSHECKPD 435
Cdd:PTZ00480 190 -------RIMRPTDVPDTGL-------LCDLLWSDPDKDVQGWADNERGVSYVFSQEIVQVFLKKHELDLICRAHQVVED 255
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|
gi 755566531 436 GYEVSHDGKVITVFSASNYYEEGSNRGAYIRLSYGTMPQF 475
Cdd:PTZ00480 256 GYEFFSKRQLVTLFSAPNYCGEFDNAGSMMTIDESLMCSF 295
FRQ1 COG5126
Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms];
511-671 8.58e-14

Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms];


Pssm-ID: 444056 [Multi-domain]  Cd Length: 137  Bit Score: 68.67  E-value: 8.58e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 511 RKTDLINAFELRDHSRSGRISLAEWAFSMENIlglnlpWRSLSSHLVTiDSSGSVdymsSFDDIRiekptKDMKSNLTET 590
Cdd:COG5126    3 QRRKLDRRFDLLDADGDGVLERDDFEALFRRL------WATLFSEADT-DGDGRI----SREEFV-----AGMESLFEAT 66
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 591 MyryRSDLKIIFNIIDSDQSGLISMDEFRTMWKLFNahykahIDDSQIDELASIVDFNKDGNIDFNEFLKAfyvVHKYDK 670
Cdd:COG5126   67 V---EPFARAAFDLLDTDGDGKISADEFRRLLTALG------VSEEEADELFARLDTDGDGKISFEEFVAA---VRDYYT 134

                 .
gi 755566531 671 P 671
Cdd:COG5126  135 P 135
Metallophos pfam00149
Calcineurin-like phosphoesterase; This family includes a diverse range of phosphoesterases, ...
196-306 1.19e-12

Calcineurin-like phosphoesterase; This family includes a diverse range of phosphoesterases, including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this superfamily centre around the metal chelating residues.


Pssm-ID: 459691 [Multi-domain]  Cd Length: 114  Bit Score: 64.93  E-value: 1.19e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531  196 ITICGDLH--GKLDDLMLIFykNGLPSENNPYVF--NGDFVDRGNNSMEILmiLLVCFLVYPSDLHLNRGNHEDFMMNLr 271
Cdd:pfam00149   3 ILVIGDLHlpGQLDDLLELL--KKLLEEGKPDLVlhAGDLVDRGPPSEEVL--ELLERLIKYVPVYLVRGNHDFDYGEC- 77
                          90       100       110
                  ....*....|....*....|....*....|....*
gi 755566531  272 ygftkEILQKYKLHGRKILQVLEEVYTWLPIGTII 306
Cdd:pfam00149  78 -----LRLYPYLGLLARPWKRFLEVFNFLPLAGIL 107
EF-hand_7 pfam13499
EF-hand domain pair;
595-663 1.14e-10

EF-hand domain pair;


Pssm-ID: 463900 [Multi-domain]  Cd Length: 67  Bit Score: 57.65  E-value: 1.14e-10
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 755566531  595 RSDLKIIFNIIDSDQSGLISMDEFRTMwkLFNAHYKAHIDDSQIDELASIVDFNKDGNIDFNEFLKAFY 663
Cdd:pfam13499   1 EEKLKEAFKLLDSDGDGYLDVEELKKL--LRKLEEGEPLSDEEVEELFKEFDLDKDGRISFEEFLELYS 67
EFh cd00051
EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal ...
597-662 2.06e-10

EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.


Pssm-ID: 238008 [Multi-domain]  Cd Length: 63  Bit Score: 56.79  E-value: 2.06e-10
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 755566531 597 DLKIIFNIIDSDQSGLISMDEFRTMWKLFNAHYkahiDDSQIDELASIVDFNKDGNIDFNEFLKAF 662
Cdd:cd00051    1 ELREAFRLFDKDGDGTISADELKAALKSLGEGL----SEEEIDEMIREVDKDGDGKIDFEEFLELM 62
PTZ00183 PTZ00183
centrin; Provisional
518-660 8.25e-07

centrin; Provisional


Pssm-ID: 185503 [Multi-domain]  Cd Length: 158  Bit Score: 49.30  E-value: 8.25e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 518 AFELRDHSRSGRISLAEWAFSMENiLGLNLPWRSLSSHLVTID--SSGSVDYMSSFDDIRIEKPTKDMKsnltETMYRyr 595
Cdd:PTZ00183  22 AFDLFDTDGSGTIDPKELKVAMRS-LGFEPKKEEIKQMIADVDkdGSGKIDFEEFLDIMTKKLGERDPR----EEILK-- 94
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 755566531 596 sdlkiIFNIIDSDQSGLISMDEFRTMWKlfnaHYKAHIDDSQIDELASIVDFNKDGNIDFNEFLK 660
Cdd:PTZ00183  95 -----AFRLFDDDKTGKISLKNLKRVAK----ELGETITDEELQEMIDEADRNGDGEISEEEFYR 150
EH smart00027
Eps15 homology domain; Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe ...
601-665 8.75e-04

Eps15 homology domain; Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.


Pssm-ID: 197477 [Multi-domain]  Cd Length: 96  Bit Score: 39.18  E-value: 8.75e-04
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 755566531   601 IFNIIDSDQSGLISMDEFRTMWklfnahYKAHIDDSQIDELASIVDFNKDGNIDFNEFLKAFYVV 665
Cdd:smart00027  15 IFRSLDKNQDGTVTGAQAKPIL------LKSGLPQTLLAKIWNLADIDNDGELDKDEFALAMHLI 73
 
Name Accession Description Interval E-value
MPP_RdgC cd07420
Drosophila melanogaster RdgC and related proteins, metallophosphatase domain; RdgC (retinal ...
144-479 0e+00

Drosophila melanogaster RdgC and related proteins, metallophosphatase domain; RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.


Pssm-ID: 277364 [Multi-domain]  Cd Length: 297  Bit Score: 605.17  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 144 PLTFTDIHILLQAFKQQQILHAHYVLEVLFEARKVLKQMPNFSHVKTFPAKEITICGDLHGKLDDLMLIFYKNGLPSENN 223
Cdd:cd07420    1 PLTKTHIDLLIEAFKLKQRLHAKYVLLILREARKSLKQLPNISRVSTSYSKEVTICGDLHGKLDDLLLIFYKNGLPSPEN 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 224 PYVFNGDFVDRGNNSMEILMILLVCFLVYPSDLHLNRGNHEDFMMNLRYGFTKEILQKYKLHGRKILQVLEEVYTWLPIG 303
Cdd:cd07420   81 PYVFNGDFVDRGKRSIEILMILFAFVLVYPNAVHLNRGNHEDHIMNLRYGFTKEVMQKYKDHGKKILRLLEDVFSWLPLA 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 304 TIIDNEILVIHGGISESTDLNTLHQLQRNKMKSvlmppvlgnqetgekrnksasnyveprkvepdktpsedlTKQEWEQI 383
Cdd:cd07420  161 TIIDNKVLVVHGGISDSTDLDLLDKIDRHKYVS---------------------------------------TKTEWQQV 201
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 384 VDILWSDPRGKKGCYPNTSRGGGCYFGPDVTSKVLSKNQLKMLIRSHECKPDGYEVSHDGKVITVFSASNYYEEGSNRGA 463
Cdd:cd07420  202 VDILWSDPKATKGCKPNTFRGGGCYFGPDVTSQFLQKHGLSLLIRSHECKPEGYEFCHNNKVITIFSASNYYEEGSNRGA 281
                        330
                 ....*....|....*.
gi 755566531 464 YIRLSYGTMPQFFQYQ 479
Cdd:cd07420  282 YVKLGPQLTPHFVQYQ 297
PP2Ac smart00156
Protein phosphatase 2A homologues, catalytic domain; Large family of serine/threonine ...
163-482 3.76e-106

Protein phosphatase 2A homologues, catalytic domain; Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.


Pssm-ID: 197547 [Multi-domain]  Cd Length: 271  Bit Score: 323.01  E-value: 3.76e-106
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531   163 LHAHYVLEVLFEARKVLKQMPNFSHVktfpAKEITICGDLHGKLDDLMLIFYKNGLPSENNpYVFNGDFVDRGNNSMEIL 242
Cdd:smart00156   1 LYKEEILELLREVKEIFRQEPNLVEV----SAPVTVCGDIHGQFDDLLRLFDKNGQPPETN-YVFLGDYVDRGPFSIEVI 75
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531   243 MILLVCFLVYPSDLHLNRGNHEDFMMNLRYGFTKEILQKYklhGRKILQVLEEVYTWLPIGTIIDNEILVIHGGISEstD 322
Cdd:smart00156  76 LLLFALKILYPNRIVLLRGNHESRSMNEIYGFYDECKRKY---GERIYEKFNEAFSWLPLAALINGKILCMHGGLSP--D 150
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531   323 LNTLHQLqrNKMKSVLMPPvlgnqetgekrnksasnyveprkvepdktpsedltkqEWEQIVDILWSDPRGKKGCYPNTS 402
Cdd:smart00156 151 LTTLDDI--RKLKRPQEPP-------------------------------------DDGLLIDLLWSDPDQPVNGFGPSI 191
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531   403 RGGGCYFGPDVTSKVLSKNQLKMLIRSHECKPDGYEVSHDGKVITVFSASNYYEEGSNRGAYIRLSYGTMPQFFQYQVTS 482
Cdd:smart00156 192 RGASYIFGPDAVDEFLKKNNLKLIIRAHQVVDDGYEFFADGKLVTIFSAPNYCDRFGNKAAVLKVDKDLKLTFEQFKPGK 271
MPP_PP5_C cd07417
PP5, C-terminal metallophosphatase domain; Serine/threonine protein phosphatase-5 (PP5) is a ...
136-479 1.45e-98

PP5, C-terminal metallophosphatase domain; Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.


Pssm-ID: 277362 [Multi-domain]  Cd Length: 316  Bit Score: 305.34  E-value: 1.45e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 136 YDGPRLQF-PLTFTDIHILLQAFKQQQILHAHYVLEVLFEARKVLKQMPNFSHVKTFPAKEITICGDLHGKLDDLMLIFY 214
Cdd:cd07417    1 YSGPKLEDgKVTLEFVKEMMEWFKDQKKLHKKYAYQILLQVKEILKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFE 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 215 KNGLPSENNPYVFNGDFVDRGNNSMEILMILLVCFLVYPSDLHLNRGNHEDFMMNLRYGFTKEILQKYklhGRKILQVLE 294
Cdd:cd07417   81 LNGLPSETNPYLFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKIYGFEGEVKAKY---NEQMFNLFS 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 295 EVYTWLPIGTIIDNEILVIHGGISeSTDLNTLHQLqrnkmksvlmppvlgnqetgekrnksasnyvepRKVEPDKTPSED 374
Cdd:cd07417  158 EVFNWLPLAHLINGKVLVVHGGLF-SDDGVTLDDI---------------------------------RKIDRFRQPPDS 203
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 375 ltkqewEQIVDILWSDPRGKKGCYPnTSRGGGCYFGPDVTSKVLSKNQLKMLIRSHECKPDGYEVSHDGKVITVFSASNY 454
Cdd:cd07417  204 ------GLMCELLWSDPQPQPGRGP-SKRGVGCQFGPDVTKRFLEENNLDYIIRSHEVKDEGYEVEHDGKCITVFSAPNY 276
                        330       340
                 ....*....|....*....|....*.
gi 755566531 455 YEEGSNRGAYIRLSYGTM-PQFFQYQ 479
Cdd:cd07417  277 CDQMGNKGAFIRFKGSDLkPKFTQFE 302
MPP_PPP_family cd00144
phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain; ...
197-467 1.13e-67

phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain; The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.


Pssm-ID: 277316 [Multi-domain]  Cd Length: 229  Bit Score: 221.09  E-value: 1.13e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 197 TICGDLHGKLDDLMLIFYKNGLPSENNpYVFNGDFVDRGNNSMEILMILLVCFLVYPSDLHLNRGNHEDFMMNLRYGFTK 276
Cdd:cd00144    1 IVVGDIHGCFDDLLRLLEKLGFPPEDK-YLFLGDYVDRGPDSVEVIDLLLALKILYPDNVFLLRGNHEFMLLNFLYGFYD 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 277 E-ILQKYKLHGRKILQVLEEVYTWLPIGTIIDNEILVIHGGISESTDLNTlhqlqrnkmksvlmppvlgnqetgekrnks 355
Cdd:cd00144   80 ErTLRCLRKGGEELWREFNEVFNYLPLAALVDGKILCVHGGLSPDLTLLD------------------------------ 129
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 356 asnyvEPRKVEPDKTPSEDLTKqeweqivDILWSDPRGKKGCYPNTSRGGGCYFGPDVTSKVLSKNQLKMLIRSHECKPD 435
Cdd:cd00144  130 -----QIRNIRPIENPDDQLVE-------DLLWSDPDESVGDFESSSRGGGYLFGEDAVDEFLKKNGLKLIVRGHTPVEG 197
                        250       260       270
                 ....*....|....*....|....*....|..
gi 755566531 436 GYEVSHDGKVITVFSASNYYEEGSNRGAYIRL 467
Cdd:cd00144  198 GYEFLHGGKLITIFSAPNYCGKGGNKLAALVV 229
MPP_PP7 cd07418
PP7, metallophosphatase domain; PP7 is a plant phosphoprotein phosphatase that is highly ...
170-479 4.59e-56

PP7, metallophosphatase domain; PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.


Pssm-ID: 163661 [Multi-domain]  Cd Length: 377  Bit Score: 195.40  E-value: 4.59e-56
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 170 EVLFEARKVLKQMPNFSHVKTFPAKEITICGDLHGKLDDLMLIFYKNGLPSENNPYVFNGDFVDRGNNSMEILMILLVCF 249
Cdd:cd07418   42 SLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFLLEDAGFPDQNRFYVFNGDYVDRGAWGLETFLLLLSWK 121
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 250 LVYPSDLHLNRGNHEDFMMNLRYGFTKEILQKYKLHGRKILQVLEEVYTWLPIGTIIDNEILVIHGGI------------ 317
Cdd:cd07418  122 VLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDKGKHVYRKCLGCFEGLPLASIIAGRVYTAHGGLfrspslpkrkkq 201
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 318 -------------SESTDLNTLHQLQRNKmKSVLMPPvlgnqetGEKRNKSASnyveprkvepdktpsedltkqeweqiv 384
Cdd:cd07418  202 kgknrrvlllepeSESLKLGTLDDLMKAR-RSVLDPP-------GEGSNLIPG--------------------------- 246
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 385 DILWSDPRGKKGCYPNTSRGGGCYFGPDVTSKVLSKNQLKMLIRSHEcKPD-------------GYEVSHD---GKVITV 448
Cdd:cd07418  247 DVLWSDPSLTPGLSPNKQRGIGLLWGPDCTEEFLEKNNLKLIIRSHE-GPDarekrpglagmnkGYTVDHDvesGKLITL 325
                        330       340       350
                 ....*....|....*....|....*....|....*....
gi 755566531 449 FSASNY------YEEGSNRGAYIRLSYGTM--PQFFQYQ 479
Cdd:cd07418  326 FSAPDYpqfqatEERYNNKGAYIILQPPDFsdPQFHTFE 364
MPP_PP2A_PP4_PP6 cd07415
PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain; PP2A-like family of ...
175-455 7.09e-54

PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain; PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2A belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.


Pssm-ID: 277360 [Multi-domain]  Cd Length: 285  Bit Score: 186.25  E-value: 7.09e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 175 ARKVLKQMPNFSHVKTfPakeITICGDLHGKLDDLMLIFYKNGLPSENNpYVFNGDFVDRGNNSMEILMILLVCFLVYPS 254
Cdd:cd07415   27 AKEILVKESNVQRVRS-P---VTVCGDIHGQFYDLLELFRIGGDVPDTN-YLFLGDYVDRGYYSVETFLLLLALKVRYPD 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 255 DLHLNRGNHEDFMMNLRYGFTKEILQKYKlhGRKILQVLEEVYTWLPIGTIIDNEILVIHGGISEStdLNTLHQLqrnkm 334
Cdd:cd07415  102 RITLLRGNHESRQITQVYGFYDECLRKYG--NANVWKYFTDLFDYLPLAALIDGQIFCVHGGLSPS--IQTLDQI----- 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 335 ksvlmppvlgnqetgekrnkSASNyvepRKVEPdktPSEDLtkqeweqIVDILWSDPRGKKGCYPNtSRGGGCYFGPDVT 414
Cdd:cd07415  173 --------------------RALD----RFQEV---PHEGP-------MCDLLWSDPDDREGWGIS-PRGAGYLFGQDVV 217
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|.
gi 755566531 415 SKVLSKNQLKMLIRSHECKPDGYEVSHDGKVITVFSASNYY 455
Cdd:cd07415  218 EEFNHNNGLTLICRAHQLVMEGYQWMFNNKLVTVWSAPNYC 258
MPP_Bsu1_C cd07419
Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase ...
158-467 7.76e-49

Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain; Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.


Pssm-ID: 277363 [Multi-domain]  Cd Length: 311  Bit Score: 173.40  E-value: 7.76e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 158 KQQQILHAHYVLEVLFEARKVLKQMPNFSHVKTfPAKeitICGDLHGKLDDLMLIFYKNGLPSEN-------NPYVFNGD 230
Cdd:cd07419   16 ERRFFFDCQEIAELCDEAERIFRQEPSVLRLRA-PIK---IFGDIHGQFGDLMRLFDEYGSPVTEeagdieyIDYLFLGD 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 231 FVDRGNNSMEILMILLVCFLVYPSDLHLNRGNHEDFMMNLRYGFTKEILQKYKLHGRK---ILQVLEEVYTWLPIGTIID 307
Cdd:cd07419   92 YVDRGSHSLETICLLLALKVKYPNQIHLIRGNHEAADINALFGFREECIERLGEDIRDgdsVWQRINRLFNWLPLAALIE 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 308 NEILVIHGGISES-TDLNTLHQLQRnkmkSVLMPPvlGNQetgekrnksasnyveprkvepdktpsedltkqeweQIVDI 386
Cdd:cd07419  172 DKIICVHGGIGRSiNHIHQIENLKR----PITMEA--GSP-----------------------------------VVMDL 210
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 387 LWSDPRGK---KGCYPNT--SRGGGCY--FGPDVTSKVLSKNQLKMLIRSHECKPDGYEVSHDGKVITVFSASNYYEEGS 459
Cdd:cd07419  211 LWSDPTENdsvLGLRPNAidPRGTGLIvkFGPDRVMEFLEENDLQMIIRAHECVMDGFERFAQGHLITLFSATNYCGTAG 290

                 ....*...
gi 755566531 460 NRGAYIRL 467
Cdd:cd07419  291 NAGAILVL 298
MPP_PP1_PPKL cd07414
PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain; PP1 ...
174-475 3.51e-45

PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain; PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.


Pssm-ID: 277359 [Multi-domain]  Cd Length: 291  Bit Score: 162.89  E-value: 3.51e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 174 EARKVLKQMPNFSHVKTfPAKeitICGDLHGKLDDLMLIFYKNGLPSENNpYVFNGDFVDRGNNSMEILMILLVCFLVYP 253
Cdd:cd07414   34 KSREIFLSQPILLELEA-PLK---ICGDIHGQYYDLLRLFEYGGFPPESN-YLFLGDYVDRGKQSLETICLLLAYKIKYP 108
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 254 SDLHLNRGNHEDFMMNLRYGFTKEILQKYKLhgrKILQVLEEVYTWLPIGTIIDNEILVIHGGIseSTDLNTLHQLQRNK 333
Cdd:cd07414  109 ENFFLLRGNHECASINRIYGFYDECKRRYNI---KLWKTFTDCFNCLPVAAIVDEKIFCCHGGL--SPDLQSMEQIRRIM 183
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 334 mksvlmppvlgnqetgekrnksasnyveprkvEPDKTPSEDLtkqeweqIVDILWSDPRGKKGCYPNTSRGGGCYFGPDV 413
Cdd:cd07414  184 --------------------------------RPTDVPDQGL-------LCDLLWSDPDKDVQGWGENDRGVSFTFGADV 224
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 755566531 414 TSKVLSKNQLKMLIRSHECKPDGYEVSHDGKVITVFSASNYYEEGSNRGAYIRLSYGTMPQF 475
Cdd:cd07414  225 VAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSF 286
MPP_PP2B cd07416
PP2B, metallophosphatase domain; PP2B (calcineurin) is a unique serine/threonine protein ...
149-472 3.65e-43

PP2B, metallophosphatase domain; PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.


Pssm-ID: 277361 [Multi-domain]  Cd Length: 305  Bit Score: 157.85  E-value: 3.65e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 149 DIHILLQAFKQQQILHAHYVLEVLFEARKVLKQMPNFSHVKTfpakEITICGDLHGKLDDLMLIFYKNGLPSENNpYVFN 228
Cdd:cd07416    2 RVDILKAHFMREGRLSEEDALRIITEGAEILRQEPNLLRIEA----PVTVCGDIHGQFYDLLKLFEVGGSPANTR-YLFL 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 229 GDFVDRGNNSMEILMILLVCFLVYPSDLHLNRGNHEDFMMNLRYGFTKEILQKYklhGRKILQVLEEVYTWLPIGTIIDN 308
Cdd:cd07416   77 GDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY---SERVYDACMEAFDCLPLAALMNQ 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 309 EILVIHGGIseSTDLNTLHQLqrNKMKSVLMPPVLGnqetgekrnksasnyveprkvepdktpsedltkqeweQIVDILW 388
Cdd:cd07416  154 QFLCVHGGL--SPELKTLDDI--RKLDRFREPPSYG-------------------------------------PMCDLLW 192
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 389 SDPRGKKG-------CYPNTSRGGGCYFGPDVTSKVLSKNQLKMLIRSHECKPDGYEV--SHDGK----VITVFSASNYY 455
Cdd:cd07416  193 SDPLEDFGnektqehFVHNTVRGCSYFYSYRAVCEFLQKNNLLSIIRAHEAQDAGYRMyrKSQTTgfpsLITIFSAPNYL 272
                        330
                 ....*....|....*..
gi 755566531 456 EEGSNRGAYIRLSYGTM 472
Cdd:cd07416  273 DVYNNKAAVLKYENNVM 289
PTZ00480 PTZ00480
serine/threonine-protein phosphatase; Provisional
196-475 2.06e-37

serine/threonine-protein phosphatase; Provisional


Pssm-ID: 185658 [Multi-domain]  Cd Length: 320  Bit Score: 142.11  E-value: 2.06e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 196 ITICGDLHGKLDDLMLIFYKNGLPSENNpYVFNGDFVDRGNNSMEILMILLVCFLVYPSDLHLNRGNHEDFMMNLRYGFT 275
Cdd:PTZ00480  61 LKICGDVHGQYFDLLRLFEYGGYPPESN-YLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFY 139
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 276 KEILQKYKLhgrKILQVLEEVYTWLPIGTIIDNEILVIHGGIseSTDLNTLHQLQrnkmksvlmppvlgnqetgekrnks 355
Cdd:PTZ00480 140 DECKRRYTI---KLWKTFTDCFNCLPVAALIDEKILCMHGGL--SPELSNLEQIR------------------------- 189
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 356 asnyvepRKVEPDKTPSEDLtkqeweqIVDILWSDPRGKKGCYPNTSRGGGCYFGPDVTSKVLSKNQLKMLIRSHECKPD 435
Cdd:PTZ00480 190 -------RIMRPTDVPDTGL-------LCDLLWSDPDKDVQGWADNERGVSYVFSQEIVQVFLKKHELDLICRAHQVVED 255
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|
gi 755566531 436 GYEVSHDGKVITVFSASNYYEEGSNRGAYIRLSYGTMPQF 475
Cdd:PTZ00480 256 GYEFFSKRQLVTLFSAPNYCGEFDNAGSMMTIDESLMCSF 295
PTZ00244 PTZ00244
serine/threonine-protein phosphatase PP1; Provisional
156-463 2.96e-36

serine/threonine-protein phosphatase PP1; Provisional


Pssm-ID: 140271 [Multi-domain]  Cd Length: 294  Bit Score: 138.11  E-value: 2.96e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 156 AFKQQQILHAHYVLEVLFEARKVLKQMPNFSHVKtfpaKEITICGDLHGKLDDLMLIFYKNGLPSENNpYVFNGDFVDRG 235
Cdd:PTZ00244  18 RTQRQILIREEDIRAVLTEVREIFMSQPMLLEIR----PPVRVCGDTHGQYYDLLRIFEKCGFPPYSN-YLFLGDYVDRG 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 236 NNSMEILmILLVCF-LVYPSDLHLNRGNHEDFMMNLRYGFTKEILQKYKLhgrKILQVLEEVYTWLPIGTIIDNEILVIH 314
Cdd:PTZ00244  93 KHSVETI-TLQFCYkIVYPENFFLLRGNHECASINKMYGFFDDVKRRYNI---KLFKAFTDVFNTMPVCCVISEKIICMH 168
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 315 GGIS-ESTDLNTLHQLQRnkmksvlmppvlgnqetgekrnksasnyveprkvePDKTPSEDLtkqeweqIVDILWSDPRG 393
Cdd:PTZ00244 169 GGLSpDLTSLASVNEIER-----------------------------------PCDVPDRGI-------LCDLLWADPED 206
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 394 KKGCYPNTSRGGGCYFGPDVTSKVLSKNQLKMLIRSHECKPDGYEVSHDGKVITVFSASNYYEEGSNRGA 463
Cdd:PTZ00244 207 EVRGFLESDRGVSYLFGEDIVNDFLDMVDMDLIVRAHQVMERGYGFFASRQLVTVFSAPNYCGEFDNDAA 276
PTZ00239 PTZ00239
serine/threonine protein phosphatase 2A; Provisional
149-454 5.88e-35

serine/threonine protein phosphatase 2A; Provisional


Pssm-ID: 173488 [Multi-domain]  Cd Length: 303  Bit Score: 134.56  E-value: 5.88e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 149 DIHILLQAFKQQQILHAHYVLEVLFEARKVLKQMPNFSHVKTfpakEITICGDLHGKLDDLMLIFYKNG-LPSENnpYVF 227
Cdd:PTZ00239   2 DIDRHIATLLNGGCLPERDLKLICERAKEIFLEESNVQPVRA----PVNVCGDIHGQFYDLQALFKEGGdIPNAN--YIF 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 228 NGDFVDRGNNSMEILMILLVCFLVYPSDLHLNRGNHEDFMMNLRYGFTKEILQKYKlhGRKILQVLEEVYTWLPIGTIID 307
Cdd:PTZ00239  76 IGDFVDRGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYG--NSNPWRLFMDVFDCLPLAALIE 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 308 NEILVIHGGIseSTDLNTLHQLQrnkmksvlmppvlgnqetgekrnksasnyVEPRKVE-PDKTPsedltkqeweqIVDI 386
Cdd:PTZ00239 154 GQILCVHGGL--SPDMRTIDQIR-----------------------------TIDRKIEiPHEGP-----------FCDL 191
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 755566531 387 LWSDPRGKKGCYPNtSRGGGCYFGPDVTSKVLSKNQLKMLIRSHECKPDGYEV-SHDGKVITVFSASNY 454
Cdd:PTZ00239 192 MWSDPEEVEYWAVN-SRGAGYLFGAKVTKEFCRLNDLTLICRAHQLVMEGYKYwFPDQNLVTVWSAPNY 259
FRQ1 COG5126
Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms];
511-671 8.58e-14

Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms];


Pssm-ID: 444056 [Multi-domain]  Cd Length: 137  Bit Score: 68.67  E-value: 8.58e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 511 RKTDLINAFELRDHSRSGRISLAEWAFSMENIlglnlpWRSLSSHLVTiDSSGSVdymsSFDDIRiekptKDMKSNLTET 590
Cdd:COG5126    3 QRRKLDRRFDLLDADGDGVLERDDFEALFRRL------WATLFSEADT-DGDGRI----SREEFV-----AGMESLFEAT 66
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 591 MyryRSDLKIIFNIIDSDQSGLISMDEFRTMWKLFNahykahIDDSQIDELASIVDFNKDGNIDFNEFLKAfyvVHKYDK 670
Cdd:COG5126   67 V---EPFARAAFDLLDTDGDGKISADEFRRLLTALG------VSEEEADELFARLDTDGDGKISFEEFVAA---VRDYYT 134

                 .
gi 755566531 671 P 671
Cdd:COG5126  135 P 135
Metallophos pfam00149
Calcineurin-like phosphoesterase; This family includes a diverse range of phosphoesterases, ...
196-306 1.19e-12

Calcineurin-like phosphoesterase; This family includes a diverse range of phosphoesterases, including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this superfamily centre around the metal chelating residues.


Pssm-ID: 459691 [Multi-domain]  Cd Length: 114  Bit Score: 64.93  E-value: 1.19e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531  196 ITICGDLH--GKLDDLMLIFykNGLPSENNPYVF--NGDFVDRGNNSMEILmiLLVCFLVYPSDLHLNRGNHEDFMMNLr 271
Cdd:pfam00149   3 ILVIGDLHlpGQLDDLLELL--KKLLEEGKPDLVlhAGDLVDRGPPSEEVL--ELLERLIKYVPVYLVRGNHDFDYGEC- 77
                          90       100       110
                  ....*....|....*....|....*....|....*
gi 755566531  272 ygftkEILQKYKLHGRKILQVLEEVYTWLPIGTII 306
Cdd:pfam00149  78 -----LRLYPYLGLLARPWKRFLEVFNFLPLAGIL 107
EF-hand_7 pfam13499
EF-hand domain pair;
595-663 1.14e-10

EF-hand domain pair;


Pssm-ID: 463900 [Multi-domain]  Cd Length: 67  Bit Score: 57.65  E-value: 1.14e-10
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 755566531  595 RSDLKIIFNIIDSDQSGLISMDEFRTMwkLFNAHYKAHIDDSQIDELASIVDFNKDGNIDFNEFLKAFY 663
Cdd:pfam13499   1 EEKLKEAFKLLDSDGDGYLDVEELKKL--LRKLEEGEPLSDEEVEELFKEFDLDKDGRISFEEFLELYS 67
EFh cd00051
EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal ...
597-662 2.06e-10

EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.


Pssm-ID: 238008 [Multi-domain]  Cd Length: 63  Bit Score: 56.79  E-value: 2.06e-10
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 755566531 597 DLKIIFNIIDSDQSGLISMDEFRTMWKLFNAHYkahiDDSQIDELASIVDFNKDGNIDFNEFLKAF 662
Cdd:cd00051    1 ELREAFRLFDKDGDGTISADELKAALKSLGEGL----SEEEIDEMIREVDKDGDGKIDFEEFLELM 62
PPP5 pfam08321
PPP5 TPR repeat region; This region is specific to the PPP5 subfamily of serine/threonine ...
130-185 2.92e-07

PPP5 TPR repeat region; This region is specific to the PPP5 subfamily of serine/threonine phosphatases and contains TPR repeats.


Pssm-ID: 462427  Cd Length: 92  Bit Score: 48.62  E-value: 2.92e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 755566531  130 IEVPDSYDGPRLQFP---LTFtdIHILLQAFKQQQILHAHYVLEVLFEARKVLKQMPNF 185
Cdd:pfam08321  34 IVVEDSYDGPRLEDEkitLEF--VKDMIERFKKGKKLHKKYAYQILLKVKEILKKEPSL 90
EFh_parvalbumin_alpha cd16254
EF-hand, calcium binding motif, found in alpha-parvalbumin; Alpha-parvalbumin is cytosolic Ca2 ...
561-660 5.97e-07

EF-hand, calcium binding motif, found in alpha-parvalbumin; Alpha-parvalbumin is cytosolic Ca2+/Mg2+-binding protein expressed mainly in fast-twitch skeletal myofibrils, where it may act as a soluble relaxing factor facilitating the Ca2+-mediated relaxation phase. It is also expressed in rapidly firing neurons, particularly GABA-ergic neurons, and thus may confer protection against Ca2+ toxicity. The major role of alpha-parvalbumin is metal buffering and transport of Ca2+. It binds different metal cations, and exhibits very high affinity for Ca2+ and physiologically significant affinity for Mg2+. Alpha-parvalbumin is characterized by the presence of three consecutive EF-hand motifs (helix-loop-helix) called AB, CD, and EF, but only CD and EF can chelate metal ions, such as Ca2+ and Mg2+. Both metal ion-binding sites in alpha-parvalbumin are high-affinity sites. Additionally, in contrast to beta-parvalbumin, alpha-parvalbumin is less acidic and has an additional residue in the C-terminal helix.


Pssm-ID: 319997 [Multi-domain]  Cd Length: 101  Bit Score: 48.28  E-value: 5.97e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 561 SSGSVDYMSSFDDIRIEKPTKDmksnltetmyryrsDLKIIFNIIDSDQSGLISMDEFRTMWKLFNAHYKaHIDDSQIDE 640
Cdd:cd16254   13 AADSFDYKKFFEMVGLKKKSAD--------------DVKKVFHILDKDKSGFIEEDELKFVLKGFSPDGR-DLSDKETKA 77
                         90       100
                 ....*....|....*....|
gi 755566531 641 LASIVDFNKDGNIDFNEFLK 660
Cdd:cd16254   78 LLAAGDKDGDGKIGIDEFAT 97
PTZ00183 PTZ00183
centrin; Provisional
518-660 8.25e-07

centrin; Provisional


Pssm-ID: 185503 [Multi-domain]  Cd Length: 158  Bit Score: 49.30  E-value: 8.25e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 518 AFELRDHSRSGRISLAEWAFSMENiLGLNLPWRSLSSHLVTID--SSGSVDYMSSFDDIRIEKPTKDMKsnltETMYRyr 595
Cdd:PTZ00183  22 AFDLFDTDGSGTIDPKELKVAMRS-LGFEPKKEEIKQMIADVDkdGSGKIDFEEFLDIMTKKLGERDPR----EEILK-- 94
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 755566531 596 sdlkiIFNIIDSDQSGLISMDEFRTMWKlfnaHYKAHIDDSQIDELASIVDFNKDGNIDFNEFLK 660
Cdd:PTZ00183  95 -----AFRLFDDDKTGKISLKNLKRVAK----ELGETITDEELQEMIDEADRNGDGEISEEEFYR 150
EFh_parvalbumin_like cd16251
EF-hand, calcium binding motif, found in parvalbumin-like EF-hand family; The family includes ...
563-658 2.51e-05

EF-hand, calcium binding motif, found in parvalbumin-like EF-hand family; The family includes alpha- and beta-parvalbumins, and a group of uncharacterized calglandulin-like proteins. Parvalbumins are small, acidic, cytosolic EF-hand-containing Ca2+-buffer and Ca2+ transporter/shuttle proteins belonging to EF-hand superfamily. They are expressed by vertebrates in fast-twitch muscle cells, specific neurons of the central and peripheral nervous system, sensory cells of the mammalian auditory organ (Corti's cell), and some other cells, and characterized by the presence of three consecutive EF-hand motifs (helix-loop-helix) called AB, CD, and EF, but only CD and EF can chelate metal ions, such as Ca2+ and Mg2+. Thus, they may play an additional role in Mg2+ handling. Moreover, parvalbumins represent one of the major animal allergens. In metal-bound states, parvalbumins possess a rigid and stable tertiary structure and display strong allergenicity. In contrast, the metal-free parvalbumins are intrinsically disordered, and the loss of metal ions results in a conformational change that decreases their IgE binding capacity. Furthermore, parvalbumins have been widely used as a neuronal marker for a variety of functional brain systems. They also function as a Ca2+ shuttle transporting Ca2+ from troponin-C (TnC) to the sarcoplasmic reticulum (SR) Ca2+ pump during muscle relaxation. Thus they may facilitate myocardial relaxation and play important roles in cardiac diastolic dysfunction. Parvalbumins consists of alpha- and beta- sublineages, which can be distinguished on the basis of isoelectric point (pI > 5 for alpha; pI


Pssm-ID: 319994 [Multi-domain]  Cd Length: 101  Bit Score: 43.68  E-value: 2.51e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 563 GSVDYMSSFDDIRIEKPTKDmksnltetmyryrsDLKIIFNIIDSDQSGLISMDEFRTMWKLFNAHYKAhIDDSQIDELA 642
Cdd:cd16251   15 GSFNYKKFFEHVGLKQKSED--------------QIKKVFQILDKDKSGFIEEEELKYILKGFSIAGRD-LTDEETKALL 79
                         90
                 ....*....|....*.
gi 755566531 643 SIVDFNKDGNIDFNEF 658
Cdd:cd16251   80 AAGDTDGDGKIGVEEF 95
PTZ00184 PTZ00184
calmodulin; Provisional
518-660 5.83e-05

calmodulin; Provisional


Pssm-ID: 185504 [Multi-domain]  Cd Length: 149  Bit Score: 43.60  E-value: 5.83e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 518 AFELRDHSRSGRISLAEWAFSMENiLGLNLPWRSLSSHLVTIDSSGSvdYMSSFDDIRIEKPTKdMKSNLTEtmyryrSD 597
Cdd:PTZ00184  16 AFSLFDKDGDGTITTKELGTVMRS-LGQNPTEAELQDMINEVDADGN--GTIDFPEFLTLMARK-MKDTDSE------EE 85
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 755566531 598 LKIIFNIIDSDQSGLISMDEFRTMwkLFNAHYKahIDDSQIDELASIVDFNKDGNIDFNEFLK 660
Cdd:PTZ00184  86 IKEAFKVFDRDGNGFISAAELRHV--MTNLGEK--LTDEEVDEMIREADVDGDGQINYEEFVK 144
EF-hand_8 pfam13833
EF-hand domain pair;
609-663 9.16e-05

EF-hand domain pair;


Pssm-ID: 404678 [Multi-domain]  Cd Length: 54  Bit Score: 40.38  E-value: 9.16e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 755566531  609 QSGLISMDEFRTMWKLFNahyKAHIDDSQIDELASIVDFNKDGNIDFNEFLKAFY 663
Cdd:pfam13833   1 EKGVITREELKRALALLG---LKDLSEDEVDILFREFDTDGDGYISFDEFCVLLE 52
MPP_Shelphs cd07425
Shewanella-like phosphatases, metallophosphatase domain; This family includes bacterial, ...
200-318 9.57e-05

Shewanella-like phosphatases, metallophosphatase domain; This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.


Pssm-ID: 277368 [Multi-domain]  Cd Length: 209  Bit Score: 44.21  E-value: 9.57e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 200 GDLHGKLDDLMLIFYKNGLPSENNPYVFN-------GDFVDRGNNSMEILMILLvcfLVYP------SDLHLNRGNHEdf 266
Cdd:cd07425    4 GDLHGDLDRLRTILKLAGVIDSNDRWIGGdtvvvqtGDILDRGDDEIEILKLLE---KLKRqarkagGKVILLLGNHE-- 78
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 755566531 267 MMNL----RY-------GFTKEILQKYKLHGRKilqvlEEVYTWL-PIGTIID-NEILVIHGGIS 318
Cdd:cd07425   79 LMNLcgdfRYvhprglnEFGGVAKRRYALLSDG-----GYIGRYLrTHPVVLVvNDILFVHGGLG 138
EFh_parvalbumins cd16253
EF-hand, calcium binding motif, found in parvalbumins; Parvalbumins are small, acidic, ...
561-658 1.09e-04

EF-hand, calcium binding motif, found in parvalbumins; Parvalbumins are small, acidic, cytosolic EF-hand-containing Ca2+-buffer and Ca2+ transporter/shuttle proteins belonging to EF-hand superfamily. They are expressed by vertebrates in fast-twitch muscle cells, specific neurons of the central and peripheral nervous system, sensory cells of the mammalian auditory organ (Corti's cell), and some other cells, and characterized by the presence of three consecutive EF-hand motifs (helix-loop-helix) called AB, CD, and EF, but only CD and EF can chelate metal ions, such as Ca2+ and Mg2+. Thus, they may play an additional role in Mg2+ handling. Moreover, parvalbumins represent one of the major animal allergens. In metal-bound states, parvalbumins possess a rigid and stable tertiary structure and display strong allergenicity. In contrast, the metal-free parvalbumins are intrinsically disordered, and the loss of metal ions results in a conformational change that decreases their IgE binding capacity. Furthermore, parvalbumins have been widely used as a neuronal marker for a variety of functional brain systems. They also function as a Ca2+ shuttle transporting Ca2+ from troponin-C (TnC) to the sarcoplasmic reticulum (SR) Ca2+ pump during muscle relaxation. Thus they may facilitate myocardial relaxation and play important roles in cardiac diastolic dysfunction. Parvalbumins consists of alpha- and beta- sublineages, which can be distinguished on the basis of isoelectric point (pI > 5 for alpha; pI


Pssm-ID: 319996 [Multi-domain]  Cd Length: 101  Bit Score: 41.78  E-value: 1.09e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 561 SSGSVDYMSSFDDIRIEKPTKDmksnltetmyryrsDLKIIFNIIDSDQSGLISMDEFRTMWKLFNAHYKAhIDDSQIDE 640
Cdd:cd16253   13 AADSFDHKAFFKAVGLSKKSPA--------------DIKKVFNILDQDKSGFIEEEELKLFLKNFSDGARV-LSDKETKN 77
                         90
                 ....*....|....*...
gi 755566531 641 LASIVDFNKDGNIDFNEF 658
Cdd:cd16253   78 FLAAGDSDGDGKIGVDEF 95
EFh_parvalbumin_beta cd16255
EF-hand, calcium binding motif, found in beta-parvalbumin; Beta-parvalbumin, also termed ...
597-660 2.07e-04

EF-hand, calcium binding motif, found in beta-parvalbumin; Beta-parvalbumin, also termed Oncomodulin-1 (OM), is a small calcium-binding protein that is expressed in hepatomas, as well as in the blastocyst and the cytotrophoblasts of the placenta. It is also found to be expressed in the cochlear outer hair cells of the organ of Corti and frequently expressed in neoplasms. Mammalian beta-parvalbumin is secreted by activated macrophages and neutrophils. It may function as a tissue-specific Ca2+-dependent regulatory protein, and may also serve as a specialized cytosolic Ca2+ buffer. Beta-parvalbumin acts as a potent growth-promoting signal between the innate immune system and neurons in vivo. It has high and specific affinity for its receptor on retinal ganglion cells (RGC) and functions as the principal mediator of optic nerve regeneration. It exerts its effects in a cyclic adenosine monophosphate (cAMP)-dependent manner and can further elevate intracellular cAMP levels. Moreover, beta-parvalbumin is associated with efferent function and outer hair cell electromotility, and can identify different hair cell types in the mammalian inner ear. Beta-parvalbumin is characterized by the presence of three consecutive EF-hand motifs (helix-loop-helix) called AB, CD, and EF, but only CD and EF can chelate metal ions, such as Ca2+ and Mg2+. The EF site displays a high-affinity for Ca2+/Mg2+, and the CD site is a low-affinity Ca2+-specific site. In addition, beta-parvalbumin is distinguished from other parvalbumins by its unusually low isoelectric point (pI = 3.1) and sequence eccentricities (e.g., Y57-L58-D59 instead of F57-I58-E59).


Pssm-ID: 319998 [Multi-domain]  Cd Length: 101  Bit Score: 40.87  E-value: 2.07e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 755566531 597 DLKIIFNIIDSDQSGLISMDEFRTMWKLFNAHYKAhIDDSQIDELASIVDFNKDGNIDFNEFLK 660
Cdd:cd16255   35 DVKKVFEIIDQDKSGFIEEEELKLFLQNFSSGARE-LTDAETKAFLKAGDSDGDGKIGVEEFQA 97
EFh_PEF_ALG-2_like cd16185
EF-hand, calcium binding motif, found in homologs of mammalian apoptosis-linked gene 2 protein ...
602-668 2.48e-04

EF-hand, calcium binding motif, found in homologs of mammalian apoptosis-linked gene 2 protein (ALG-2); The family includes some homologs of mammalian apoptosis-linked gene 2 protein (ALG-2) mainly found in lower eukaryotes, such as a parasitic protist Leishmarua major and a cellular slime mold Dictyostelium discoideum. These homologs contains five EF-hand motifs. Due to the presence of unfavorable residues at the Ca2+-coordinating positions, their non-canonical EF4 and EF5 hands may not bind Ca2+. Two Dictyostelium PEF proteins are the prototypes of this family. They may bind to cytoskeletal proteins and/or signal-transducing proteins localized to detergent-resistant membranes named lipid rafts, and occur as monomers or weak homo- or heterodimers like ALG-2. They can serve as a mediator for Ca2+ signaling-related Dictyostehum programmed cell death (PCD).


Pssm-ID: 320060 [Multi-domain]  Cd Length: 163  Bit Score: 42.20  E-value: 2.48e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 755566531 602 FNIIDSDQSGLISMDEFRTMwklfNAHYKAHIDDSQIDELASIVDFNKDGNIDFNEFLKafyvVHKY 668
Cdd:cd16185    6 FRAVDRDRSGSIDVNELQKA----LAGGGLLFSLATAEKLIRMFDRDGNGTIDFEEFAA----LHQF 64
EFh_PI-PLC cd15898
EF-hand motif found in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4. ...
598-662 8.06e-04

EF-hand motif found in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) isozymes; PI-PLC isozymes are signaling enzymes that hydrolyze the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. This family corresponds to the four EF-hand motifs containing PI-PLC isozymes, including PI-PLC-beta (1-4), -gamma (1-2), -delta (1,3,4), -epsilon (1), -zeta (1), eta (1-2). Lower eukaryotes such as yeast and slime molds contain only delta-type isozymes. In contrast, other types of isoforms present in higher eukaryotes. This family also includes 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase 1 (PLC1) from fungi. Some homologs from plants contain only two atypical EF-hand motifs and they are not included. All PI-PLC isozymes except sperm-specific PI-PLC-zeta share a core set of domains, including an N-terminal pleckstrin homology (PH) domain, four atypical EF-hand motifs, a PLC catalytic core, and a single C2 domain. PI-PLC-zeta lacks the PH domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. Most of EF-hand motifs found in PI-PLCs consist of a helix-loop-helix structure, but lack residues critical to metal binding. Moreover, the EF-hand region of most of PI-PLCs may have an important regulatory function, but it has yet to be identified. However, PI-PLC-zeta is a key exception. It is responsible for Ca2+ oscillations in fertilized oocytes and exhibits a high sensitivity to Ca2+ mediated through its EF-hand domain. In addition, PI-PLC-eta2 shows a canonical EF-loop directing Ca2+-sensitivity and thus can amplify transient Ca2+ signals. Also it appears that PI-PLC-delta1 can regulate the binding of PH domain to PIP2 in a Ca2+-dependent manner through its functionally important EF-hand domains. PI-PLCs can be activated by a variety of extracellular ligands, such as growth factors, hormones, cytokines and lipids. Their activation has been implicated in tumorigenesis and/or metastasis linked to migration, proliferation, growth, inflammation, angiogenesis and actin cytoskeleton reorganization. PI-PLC-beta isozymes are activated by G-protein coupled receptor (GPCR) through different mechanisms. However, PI-PLC-gamma isozymes are activated by receptor tyrosine kinase (RTK), such as Rho and Ras GTPases. In contrast, PI-PLC-epsilon are activated by both GPCR and RTK. PI-PLC-delta1 and PLC-eta 1 are activated by GPCR-mediated calcium mobilization. The activation mechanism for PI-PLC-zeta remains unclear.


Pssm-ID: 320029 [Multi-domain]  Cd Length: 137  Bit Score: 39.96  E-value: 8.06e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 755566531 598 LKIIFNIIDSDQSGLISMDEFRTMWKLFNAHykahIDDSQIDELASIVDFNKDGNIDFNEFLKAF 662
Cdd:cd15898    2 LRRQWIKADKDGDGKLSLKEIKKLLKRLNIR----VSEKELKKLFKEVDTNGDGTLTFDEFEELY 62
EH cd00052
Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and ...
601-665 8.45e-04

Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.


Pssm-ID: 238009 [Multi-domain]  Cd Length: 67  Bit Score: 38.35  E-value: 8.45e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 755566531 601 IFNIIDSDQSGLISMDEFRTMWKlfnahyKAHIDDSQIDELASIVDFNKDGNIDFNEFLKAFYVV 665
Cdd:cd00052    4 IFRSLDPDGDGLISGDEARPFLG------KSGLPRSVLAQIWDLADTDKDGKLDKEEFAIAMHLI 62
EH smart00027
Eps15 homology domain; Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe ...
601-665 8.75e-04

Eps15 homology domain; Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.


Pssm-ID: 197477 [Multi-domain]  Cd Length: 96  Bit Score: 39.18  E-value: 8.75e-04
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 755566531   601 IFNIIDSDQSGLISMDEFRTMWklfnahYKAHIDDSQIDELASIVDFNKDGNIDFNEFLKAFYVV 665
Cdd:smart00027  15 IFRSLDKNQDGTVTGAQAKPIL------LKSGLPQTLLAKIWNLADIDNDGELDKDEFALAMHLI 73
EFh_HEF_SCGN cd16178
EF-hand, calcium binding motif, found in secretagogin (SCGN); SCGN is a six EF-hand ...
606-660 1.24e-03

EF-hand, calcium binding motif, found in secretagogin (SCGN); SCGN is a six EF-hand calcium-binding protein expressed in neuroendocrine, pancreatic endocrine and retinal cells. It plays a crucial role in cell apoptosis, receptor signaling and differentiation. It is also involved in vesicle secretion through binding to various proteins, including interacts with SNAP25, SNAP23, DOC2alpha, ARFGAP2, rootletin, KIF5B, beta-tubulin, DDAH-2, ATP-synthase and myeloid leukemia factor 2. SCGN functions as a calcium sensor/coincidence detector modulating vesicular exocytosis of neurotransmitters, neuropeptides or hormones. It also serves as a calcium buffer in neurons. Thus, SCGN may be linked to the pathogenesis of neurological diseases such as Alzheimer's, and also acts as a serum marker of neuronal damage, or as a tumor biomarker. SCGN consists of the three globular domains each of which contains a pair of EF-hand motifs. All six EF hand motifs of SCGN in some eukaryotes, including D. rerio, X. laevis, M. domestica, G. gallus, O. anatinus, could potentially bind six calcium ions. In contrast, SCGNs from higher eukaryotes have at least one non-functional EF-hand motif due to the mutation(s) or deletions. For instance, the EF1 loop does not coordinate calcium ion due to the key residue asparagine replaced by lysine in SCGNs of many mammalian species. Moreover, the EF2 loop seems to be competent for calcium-binding in most mammalian SCGNs except for human and chimpanzee orthologs.


Pssm-ID: 320078 [Multi-domain]  Cd Length: 257  Bit Score: 41.23  E-value: 1.24e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 606 DSDQSGLISMDEFRTMWK-LFNAHyKAHIDDSQIDELAS----IVDFNKDGNIDFNEFLK 660
Cdd:cd16178  102 DADSSGYISAAELKNFLRdLFLQH-KKVITEDKLDEYTDtmmkIFDKNKDGRLDLNDMAR 160
EF-hand_1 pfam00036
EF hand; The EF-hands can be divided into two classes: signalling proteins and buffering ...
597-625 3.43e-03

EF hand; The EF-hands can be divided into two classes: signalling proteins and buffering/transport proteins. The first group is the largest and includes the most well-known members of the family such as calmodulin, troponin C and S100B. These proteins typically undergo a calcium-dependent conformational change which opens a target binding site. The latter group is represented by calbindin D9k and do not undergo calcium dependent conformational changes.


Pssm-ID: 425435 [Multi-domain]  Cd Length: 29  Bit Score: 35.45  E-value: 3.43e-03
                          10        20
                  ....*....|....*....|....*....
gi 755566531  597 DLKIIFNIIDSDQSGLISMDEFRTMWKLF 625
Cdd:pfam00036   1 ELKEIFRLFDKDGDGKIDFEEFKELLKKL 29
EFh_CREC_cab45 cd16225
EF-hand, calcium binding motif, found in 45 kDa calcium-binding protein (Cab45); Cab45, also ...
593-670 3.58e-03

EF-hand, calcium binding motif, found in 45 kDa calcium-binding protein (Cab45); Cab45, also termed stromal cell-derived factor 4 (SDF-4), is a soluble, lumenal Golgi resident low-affinity Ca2+-binding protein that contains six copies of the EF-hand Ca2+-binding motif. It is required for secretory pathway calcium ATPase1 (SPCA1)-dependent Ca2+ import into the trans-Golgi network (TGN) and plays an essential role in Ca2+-dependent secretory cargo sorting at the TGN.


Pssm-ID: 320023 [Multi-domain]  Cd Length: 278  Bit Score: 39.98  E-value: 3.58e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 593 RYRSDLKIIFNIIDSDQSGLISMDEF--RTMWKLfNAHYKAHIDDSQIdeLASIVDFNKDGNIDFNEFLKAFYVVHKYDK 670
Cdd:cd16225   31 KKRKKLKEIFKKVDVNTDGFLSAEELedWIMEKT-QEHFQEAVEENEQ--IFKAVDTDKDGNVSWEEYRVHFLLSKGYSE 107
EFh_CREC_Calumenin_like cd16226
EF-hand, calcium binding motif, found in calumenin, reticulocalbin-1 (RCN-1), reticulocalbin-3 ...
598-663 4.41e-03

EF-hand, calcium binding motif, found in calumenin, reticulocalbin-1 (RCN-1), reticulocalbin-3 (RCN-3), and similar proteins; The family corresponds to a group of six EF-hand Ca2+-binding proteins, including calumenin (also known as crocalbin or CBP-50), reticulocalbin-1 (RCN-1), reticulocalbin-3 (RCN-3), and similar proteins. Calumenin is an endo/sarcoplasmic reticulum (ER/SR) resident low-affinity Ca2+-binding protein that contains six EF-hand domains and a C-terminal SR retention signal His-Asp-Glu-Phe (HDEF) tetrapeptide. It functions as a novel regulator of SERCA2, and its expressional changes are tightly coupled with Ca2+-cycling of cardiomyocytes. It is also broadly involved in haemostasis and in the pathophysiology of thrombosis. Moreover, the extracellular calumenin acts as a suppressor of cell migration and tumor metastasis. RCN-1 is an endoplasmic reticulum resident Ca2+-binding protein with a carboxyl-terminal His-Asp-Glu-Leu (HDEL) tetrapeptide signal. It acts as a potential negative regulator of B-RAF activation and can negatively modulate cardiomyocyte hypertrophy by inhibition of the mitogen-activated protein kinase signalling cascade. It also plays a key role in the development of doxorubicin-associated resistance. RCN-3 is a putative six EF-hand Ca2+-binding protein that contains five RXXR (X is any amino acid) motifs and a C-terminal ER retrieval signal HDEL tetrapeptide. The RXXR motif represents the target sequence of subtilisin-like proprotein convertases (SPCs). RCN-3 is specifically bound to the paired basic amino-acid-cleaving enzyme-4 (PACE4) precursor protein and plays an important role in the biosynthesis of PACE4.


Pssm-ID: 320024 [Multi-domain]  Cd Length: 264  Bit Score: 39.49  E-value: 4.41e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 755566531 598 LKIIFNIIDSDQSGLISMDEFRTmWKLFNAhyKAHIDDSqIDELASIVDFNKDGNIDFNEFLKAFY 663
Cdd:cd16226   37 LGIIVDKIDKNGDGFVTEEELKD-WIKYVQ--KKYIRED-VDRQWKEYDPNKDGKLSWEEYKKATY 98
PLN02964 PLN02964
phosphatidylserine decarboxylase
595-671 5.05e-03

phosphatidylserine decarboxylase


Pssm-ID: 215520 [Multi-domain]  Cd Length: 644  Bit Score: 40.23  E-value: 5.05e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 755566531 595 RSDLKIIFNIIDSDQSGLISMDEFRTMWKLFNahykAHIDDSQIDELASIVDFNKDGNIDFNEfLKAFYVVHKYDKP 671
Cdd:PLN02964 178 RSFARRILAIVDYDEDGQLSFSEFSDLIKAFG----NLVAANKKEELFKAADLNGDGVVTIDE-LAALLALQQEQEP 249
PHA02239 PHA02239
putative protein phosphatase
196-270 6.25e-03

putative protein phosphatase


Pssm-ID: 107154 [Multi-domain]  Cd Length: 235  Bit Score: 38.82  E-value: 6.25e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755566531 196 ITICGDLHGKLDDLMLIFykNGLPSENNP---YVFNGDFVDRGNNSMEILMILLvcflvypsDLHLNR-------GNHED 265
Cdd:PHA02239   3 IYVVPDIHGEYQKLLTIM--DKINNERKPeetIVFLGDYVDRGKRSKDVVNYIF--------DLMSNDdnvvtllGNHDD 72

                 ....*
gi 755566531 266 FMMNL 270
Cdd:PHA02239  73 EFYNI 77
EFh_HEF cd15902
EF-hand, calcium binding motif, found in the hexa-EF hand proteins family; The hexa-EF hand ...
601-660 7.27e-03

EF-hand, calcium binding motif, found in the hexa-EF hand proteins family; The hexa-EF hand proteins family, also named the calbindin sub-family, contains a group of six EF-hand Ca2+-binding proteins, including calretinin (CR, also termed 29 kDa calbindin), calbindin D28K (CB, also termed vitamin D-dependent calcium-binding protein, avian-type), and secretagogin (SCGN). CR is a cytosolic hexa-EF-hand calcium-binding protein predominantly expressed in a variety of normal and tumorigenic t-specific neurons of the central and peripheral nervous system. It is a multifunctional protein implicated in many biological processes, including cell proliferation, differentiation, and cell death. CB is highly expressed in brain tissue. It is a strong calcium-binding and buffering protein responsible for preventing a neuronal death as well as maintaining and controlling calcium homeostasis. SCGN is a six EF-hand calcium-binding protein expressed in neuroendocrine, pancreatic endocrine and retinal cells. It plays a crucial role in cell apoptosis, receptor signaling and differentiation. It is also involved in vesicle secretion through binding to various proteins, including interacts with SNAP25, SNAP23, DOC2alpha, ARFGAP2, rootletin, KIF5B, beta-tubulin, DDAH-2, ATP-synthase and myeloid leukemia factor 2. SCGN functions as a Ca2+ sensor/coincidence detector modulating vesicular exocytosis of neurotransmitters, neuropeptides or hormones. Although the family members share a significant amount of secondary sequence homology, they display altered structural and biochemical characteristics, and operate in distinct fashions. CB contains six EF-hand motifs in a single globular domain, where EF-hands 1, 3, 4, 5 bind four calcium ions. CR contains six EF-hand motifs within two independent domains, CR I-II and CR III-VI. They harbor two and four EF-hand motifs, respectively. The first 5 EF-hand motifs are capable of binding calcium ions, while the EF-hand 6 is inactive. SCGN consists of the three globular domains each of which contains a pair of EF-hand motifs. Human SCGN simultaneously binds four calcium ions through its EF-hands 3, 4, 5 and 6 in one high affinity and three low affinity calcium-binding sites. In contrast, SCGNs in other lower eukaryotes, such as D. rerio, X. laevis, M. domestica, G. gallus, O. anatinus, are fully competent in terms of six calcium-binding.


Pssm-ID: 320075 [Multi-domain]  Cd Length: 254  Bit Score: 38.87  E-value: 7.27e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 755566531 601 IFNIIDSDQSGLISMDEFRTMWKLFNAHYKAHIDDSQIDE----LASIVDFNKDGNIDFNEFLK 660
Cdd:cd15902   95 IWRKYDTDGSGFIEAKELKGFLKDLLLKNKKHVSPPKLDEytklILKEFDANKDGKLELDEMAK 158
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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