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Conserved domains on  [gi|767919012|ref|XP_011509835|]
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DBF4-type zinc finger-containing protein 2 isoform X1 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ZnF_DBF super family cl46924
Zinc finger in DBF-like proteins;
3-34 8.34e-04

Zinc finger in DBF-like proteins;


The actual alignment was detected with superfamily member smart00586:

Pssm-ID: 128854 [Multi-domain]  Cd Length: 49  Bit Score: 39.38  E-value: 8.34e-04
                            10        20        30
                    ....*....|....*....|....*....|..
gi 767919012      3 KRQGYCSYCRVQYNNLEQHLFSAQHRSLTRQS 34
Cdd:smart00586    3 KKPGYCENCREKYDDLETHLLSEKHRRFAENN 34
 
Name Accession Description Interval E-value
ZnF_DBF smart00586
Zinc finger in DBF-like proteins;
3-34 8.34e-04

Zinc finger in DBF-like proteins;


Pssm-ID: 128854 [Multi-domain]  Cd Length: 49  Bit Score: 39.38  E-value: 8.34e-04
                            10        20        30
                    ....*....|....*....|....*....|..
gi 767919012      3 KRQGYCSYCRVQYNNLEQHLFSAQHRSLTRQS 34
Cdd:smart00586    3 KKPGYCENCREKYDDLETHLLSEKHRRFAENN 34
zf-DBF pfam07535
DBF zinc finger; This domain is predicted to bind metal ions and is often found associated ...
 6-29 2.35e-03

DBF zinc finger; This domain is predicted to bind metal ions and is often found associated with pfam00533 and pfam02178. It was first identified in the Drosophila chiffon gene product, and is associated with initiation of DNA replication.


Pssm-ID: 462197  Cd Length: 42  Bit Score: 37.86  E-value: 2.35e-03
                           10        20
                   ....*....|....*....|....
gi 767919012     6 GYCSYCRVQYNNLEQHLFSAQHRS 29
Cdd:pfam07535    1 GYCENCRVKYEDLEEHIVSEKHRK 24
 
Name Accession Description Interval E-value
ZnF_DBF smart00586
Zinc finger in DBF-like proteins;
3-34 8.34e-04

Zinc finger in DBF-like proteins;


Pssm-ID: 128854 [Multi-domain]  Cd Length: 49  Bit Score: 39.38  E-value: 8.34e-04
                            10        20        30
                    ....*....|....*....|....*....|..
gi 767919012      3 KRQGYCSYCRVQYNNLEQHLFSAQHRSLTRQS 34
Cdd:smart00586    3 KKPGYCENCREKYDDLETHLLSEKHRRFAENN 34
zf-DBF pfam07535
DBF zinc finger; This domain is predicted to bind metal ions and is often found associated ...
 6-29 2.35e-03

DBF zinc finger; This domain is predicted to bind metal ions and is often found associated with pfam00533 and pfam02178. It was first identified in the Drosophila chiffon gene product, and is associated with initiation of DNA replication.


Pssm-ID: 462197  Cd Length: 42  Bit Score: 37.86  E-value: 2.35e-03
                           10        20
                   ....*....|....*....|....
gi 767919012     6 GYCSYCRVQYNNLEQHLFSAQHRS 29
Cdd:pfam07535    1 GYCENCRVKYEDLEEHIVSEKHRK 24
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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