|
Name |
Accession |
Description |
Interval |
E-value |
| TPR |
COG0790 |
TPR repeat [Signal transduction mechanisms]; |
151-408 |
5.44e-32 |
|
TPR repeat [Signal transduction mechanisms]; :
Pssm-ID: 223861 [Multi-domain] Cd Length: 292 Bit Score: 125.54 E-value: 5.44e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768014510 151 DALLFGNFGVQNITAAIQLYESLAKEGSCKAQNALGFLSSYGIGMEYDQAKALIYYTFGSAGGNMMSQMILGYRYLSGIN 230
Cdd:COG0790 9 GKSLFAAAEENAVSTLGKLLSEGGDPLMAAVALKSALLNGAGSAYPPDYAKALKSYEKAAELGDAAALALLGQMYGAGKG 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768014510 231 VLQNCEVALSYYKKVADyiadtfeksEGVPVEKVSLGQLHLIGRkGLDQDYYKALHYFLKAAKAGSANAMA---FIGKMY 307
Cdd:COG0790 89 VSRDKTKAADWYRCAAA---------DGLAEALFNLGLMYANGR-GVPLDLVKALKYYEKAAKLGNVEAALamyRLGLAY 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768014510 308 LEGNA--AVPQNNATAFKYFSMAASKGNAIGLHGLGLLYFHGKGVPLNYAEALKYFQKAAEKGWPDAQFQLGFMYYSGSG 385
Cdd:COG0790 159 LSGLQalAVAYDDKKALYLYRKAAELGNPDAQLLLGRMYEKGLGVPRDLKKAFRWYKKAAEQGDGAACYNLGLMYLNGEG 238
|
250 260 270
....*....|....*....|....*....|...
gi 768014510 386 IWK----------DYKLAFKYFYLASQSGQPLA 408
Cdd:COG0790 239 VKKaafltaakeeDKKQALEWLQKACELGFDNA 271
|
|
| TPR |
COG0790 |
TPR repeat [Signal transduction mechanisms]; |
299-588 |
3.71e-27 |
|
TPR repeat [Signal transduction mechanisms]; :
Pssm-ID: 223861 [Multi-domain] Cd Length: 292 Bit Score: 111.67 E-value: 3.71e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768014510 299 AMAFIGKMYLEGNAAvPQNNATAFKYFSMAASKGNAIGLHGLGLLYFHGKGVPLNYAEALKYFQKAAEKGWPDAQFQLGF 378
Cdd:COG0790 3 FALLLSGKSLFAAAE-ENAVSTLGKLLSEGGDPLMAAVALKSALLNGAGSAYPPDYAKALKSYEKAAELGDAAALALLGQ 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768014510 379 MYYSGSGIWKDYKLAFKYFYLASQSGQPLAIYYLAKMYATGTGVVRSCRTAVELYKGVCELGHwAEKFLTAYFAYkdgdi 458
Cdd:COG0790 82 MYGAGKGVSRDKTKAADWYRCAAADGLAEALFNLGLMYANGRGVPLDLVKALKYYEKAAKLGN-VEAALAMYRLG----- 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768014510 459 dsslvQYALLAEMGYEVAQSnsafileskkanilekekmYPMALLLWNRAAIQGNAFARVKIGDYHYYGYGTKKDYQTAA 538
Cdd:COG0790 156 -----LAYLSGLQALAVAYD-------------------DKKALYLYRKAAELGNPDAQLLLGRMYEKGLGVPRDLKKAF 211
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 768014510 539 THYSIAANKyHNAQAMFNLAYMYEHGLGITKDIH----------LARRLYDMAAQTSPDA 588
Cdd:COG0790 212 RWYKKAAEQ-GDGAACYNLGLMYLNGEGVKKAAFltaakeedkkQALEWLQKACELGFDN 270
|
|
| Mplasa_alph_rch super family |
cl37461 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
18-128 |
4.19e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown. The actual alignment was detected with superfamily member TIGR04523:
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 46.55 E-value: 4.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768014510 18 IKTIKAEEHNKRQKERNVTTQVS-----VNEIKQYLSHILEQRTSSNV--------INKRENLLEKKKNQRKIRIKGIQN 84
Cdd:TIGR04523 309 NKELKSELKNQEKKLEEIQNQISqnnkiISQLNEQISQLKKELTNSESensekqreLEEKQNEIEKLKKENQSYKQEIKN 388
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 768014510 85 kdiLKRNKNHLQKQAEKNftDEGDQLFKMGIKVLQQSKSQKQKE 128
Cdd:TIGR04523 389 ---LESQINDLESKIQNQ--EKLNQQKDEQIKKLQQEKELLEKE 427
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| TPR |
COG0790 |
TPR repeat [Signal transduction mechanisms]; |
151-408 |
5.44e-32 |
|
TPR repeat [Signal transduction mechanisms];
Pssm-ID: 223861 [Multi-domain] Cd Length: 292 Bit Score: 125.54 E-value: 5.44e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768014510 151 DALLFGNFGVQNITAAIQLYESLAKEGSCKAQNALGFLSSYGIGMEYDQAKALIYYTFGSAGGNMMSQMILGYRYLSGIN 230
Cdd:COG0790 9 GKSLFAAAEENAVSTLGKLLSEGGDPLMAAVALKSALLNGAGSAYPPDYAKALKSYEKAAELGDAAALALLGQMYGAGKG 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768014510 231 VLQNCEVALSYYKKVADyiadtfeksEGVPVEKVSLGQLHLIGRkGLDQDYYKALHYFLKAAKAGSANAMA---FIGKMY 307
Cdd:COG0790 89 VSRDKTKAADWYRCAAA---------DGLAEALFNLGLMYANGR-GVPLDLVKALKYYEKAAKLGNVEAALamyRLGLAY 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768014510 308 LEGNA--AVPQNNATAFKYFSMAASKGNAIGLHGLGLLYFHGKGVPLNYAEALKYFQKAAEKGWPDAQFQLGFMYYSGSG 385
Cdd:COG0790 159 LSGLQalAVAYDDKKALYLYRKAAELGNPDAQLLLGRMYEKGLGVPRDLKKAFRWYKKAAEQGDGAACYNLGLMYLNGEG 238
|
250 260 270
....*....|....*....|....*....|...
gi 768014510 386 IWK----------DYKLAFKYFYLASQSGQPLA 408
Cdd:COG0790 239 VKKaafltaakeeDKKQALEWLQKACELGFDNA 271
|
|
| TPR |
COG0790 |
TPR repeat [Signal transduction mechanisms]; |
299-588 |
3.71e-27 |
|
TPR repeat [Signal transduction mechanisms];
Pssm-ID: 223861 [Multi-domain] Cd Length: 292 Bit Score: 111.67 E-value: 3.71e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768014510 299 AMAFIGKMYLEGNAAvPQNNATAFKYFSMAASKGNAIGLHGLGLLYFHGKGVPLNYAEALKYFQKAAEKGWPDAQFQLGF 378
Cdd:COG0790 3 FALLLSGKSLFAAAE-ENAVSTLGKLLSEGGDPLMAAVALKSALLNGAGSAYPPDYAKALKSYEKAAELGDAAALALLGQ 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768014510 379 MYYSGSGIWKDYKLAFKYFYLASQSGQPLAIYYLAKMYATGTGVVRSCRTAVELYKGVCELGHwAEKFLTAYFAYkdgdi 458
Cdd:COG0790 82 MYGAGKGVSRDKTKAADWYRCAAADGLAEALFNLGLMYANGRGVPLDLVKALKYYEKAAKLGN-VEAALAMYRLG----- 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768014510 459 dsslvQYALLAEMGYEVAQSnsafileskkanilekekmYPMALLLWNRAAIQGNAFARVKIGDYHYYGYGTKKDYQTAA 538
Cdd:COG0790 156 -----LAYLSGLQALAVAYD-------------------DKKALYLYRKAAELGNPDAQLLLGRMYEKGLGVPRDLKKAF 211
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 768014510 539 THYSIAANKyHNAQAMFNLAYMYEHGLGITKDIH----------LARRLYDMAAQTSPDA 588
Cdd:COG0790 212 RWYKKAAEQ-GDGAACYNLGLMYLNGEGVKKAAFltaakeedkkQALEWLQKACELGFDN 270
|
|
| Sel1 |
pfam08238 |
Sel1 repeat; This short repeat is found in the Sel1 protein. It is related to TPR repeats. |
551-583 |
1.76e-06 |
|
Sel1 repeat; This short repeat is found in the Sel1 protein. It is related to TPR repeats.
Pssm-ID: 429881 [Multi-domain] Cd Length: 35 Bit Score: 44.82 E-value: 1.76e-06
10 20 30
....*....|....*....|....*....|...
gi 768014510 551 AQAMFNLAYMYEHGLGITKDIHLARRLYDMAAQ 583
Cdd:pfam08238 1 AEAQYRLGYLYLYGLGVPKDPEKALEWYEKAAE 33
|
|
| SEL1 |
smart00671 |
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences. |
551-583 |
2.06e-06 |
|
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.
Pssm-ID: 214772 [Multi-domain] Cd Length: 36 Bit Score: 44.47 E-value: 2.06e-06
10 20 30
....*....|....*....|....*....|...
gi 768014510 551 AQAMFNLAYMYEHGLGITKDIHLARRLYDMAAQ 583
Cdd:smart00671 1 AEAQYNLGQMYEYGLGVPKDLEKALEYYKKAAE 33
|
|
| SEL1 |
smart00671 |
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences. |
370-404 |
2.88e-06 |
|
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.
Pssm-ID: 214772 [Multi-domain] Cd Length: 36 Bit Score: 44.09 E-value: 2.88e-06
10 20 30
....*....|....*....|....*....|....*
gi 768014510 370 PDAQFQLGFMYYSGSGIWKDYKLAFKYFYLASQSG 404
Cdd:smart00671 1 AEAQYNLGQMYEYGLGVPKDLEKALEYYKKAAELG 35
|
|
| Sel1 |
pfam08238 |
Sel1 repeat; This short repeat is found in the Sel1 protein. It is related to TPR repeats. |
334-368 |
7.89e-06 |
|
Sel1 repeat; This short repeat is found in the Sel1 protein. It is related to TPR repeats.
Pssm-ID: 429881 [Multi-domain] Cd Length: 35 Bit Score: 42.89 E-value: 7.89e-06
10 20 30
....*....|....*....|....*....|....*
gi 768014510 334 AIGLHGLGLLYFHGKGVPLNYAEALKYFQKAAEKG 368
Cdd:pfam08238 1 AEAQYRLGYLYLYGLGVPKDPEKALEWYEKAAELG 35
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
18-128 |
4.19e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 46.55 E-value: 4.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768014510 18 IKTIKAEEHNKRQKERNVTTQVS-----VNEIKQYLSHILEQRTSSNV--------INKRENLLEKKKNQRKIRIKGIQN 84
Cdd:TIGR04523 309 NKELKSELKNQEKKLEEIQNQISqnnkiISQLNEQISQLKKELTNSESensekqreLEEKQNEIEKLKKENQSYKQEIKN 388
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 768014510 85 kdiLKRNKNHLQKQAEKNftDEGDQLFKMGIKVLQQSKSQKQKE 128
Cdd:TIGR04523 389 ---LESQINDLESKIQNQ--EKLNQQKDEQIKKLQQEKELLEKE 427
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| TPR |
COG0790 |
TPR repeat [Signal transduction mechanisms]; |
151-408 |
5.44e-32 |
|
TPR repeat [Signal transduction mechanisms];
Pssm-ID: 223861 [Multi-domain] Cd Length: 292 Bit Score: 125.54 E-value: 5.44e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768014510 151 DALLFGNFGVQNITAAIQLYESLAKEGSCKAQNALGFLSSYGIGMEYDQAKALIYYTFGSAGGNMMSQMILGYRYLSGIN 230
Cdd:COG0790 9 GKSLFAAAEENAVSTLGKLLSEGGDPLMAAVALKSALLNGAGSAYPPDYAKALKSYEKAAELGDAAALALLGQMYGAGKG 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768014510 231 VLQNCEVALSYYKKVADyiadtfeksEGVPVEKVSLGQLHLIGRkGLDQDYYKALHYFLKAAKAGSANAMA---FIGKMY 307
Cdd:COG0790 89 VSRDKTKAADWYRCAAA---------DGLAEALFNLGLMYANGR-GVPLDLVKALKYYEKAAKLGNVEAALamyRLGLAY 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768014510 308 LEGNA--AVPQNNATAFKYFSMAASKGNAIGLHGLGLLYFHGKGVPLNYAEALKYFQKAAEKGWPDAQFQLGFMYYSGSG 385
Cdd:COG0790 159 LSGLQalAVAYDDKKALYLYRKAAELGNPDAQLLLGRMYEKGLGVPRDLKKAFRWYKKAAEQGDGAACYNLGLMYLNGEG 238
|
250 260 270
....*....|....*....|....*....|...
gi 768014510 386 IWK----------DYKLAFKYFYLASQSGQPLA 408
Cdd:COG0790 239 VKKaafltaakeeDKKQALEWLQKACELGFDNA 271
|
|
| TPR |
COG0790 |
TPR repeat [Signal transduction mechanisms]; |
299-588 |
3.71e-27 |
|
TPR repeat [Signal transduction mechanisms];
Pssm-ID: 223861 [Multi-domain] Cd Length: 292 Bit Score: 111.67 E-value: 3.71e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768014510 299 AMAFIGKMYLEGNAAvPQNNATAFKYFSMAASKGNAIGLHGLGLLYFHGKGVPLNYAEALKYFQKAAEKGWPDAQFQLGF 378
Cdd:COG0790 3 FALLLSGKSLFAAAE-ENAVSTLGKLLSEGGDPLMAAVALKSALLNGAGSAYPPDYAKALKSYEKAAELGDAAALALLGQ 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768014510 379 MYYSGSGIWKDYKLAFKYFYLASQSGQPLAIYYLAKMYATGTGVVRSCRTAVELYKGVCELGHwAEKFLTAYFAYkdgdi 458
Cdd:COG0790 82 MYGAGKGVSRDKTKAADWYRCAAADGLAEALFNLGLMYANGRGVPLDLVKALKYYEKAAKLGN-VEAALAMYRLG----- 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768014510 459 dsslvQYALLAEMGYEVAQSnsafileskkanilekekmYPMALLLWNRAAIQGNAFARVKIGDYHYYGYGTKKDYQTAA 538
Cdd:COG0790 156 -----LAYLSGLQALAVAYD-------------------DKKALYLYRKAAELGNPDAQLLLGRMYEKGLGVPRDLKKAF 211
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 768014510 539 THYSIAANKyHNAQAMFNLAYMYEHGLGITKDIH----------LARRLYDMAAQTSPDA 588
Cdd:COG0790 212 RWYKKAAEQ-GDGAACYNLGLMYLNGEGVKKAAFltaakeedkkQALEWLQKACELGFDN 270
|
|
| TPR |
COG0790 |
TPR repeat [Signal transduction mechanisms]; |
128-376 |
4.83e-22 |
|
TPR repeat [Signal transduction mechanisms];
Pssm-ID: 223861 [Multi-domain] Cd Length: 292 Bit Score: 96.65 E-value: 4.83e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768014510 128 EEAYLLFAKAADMGNLKAMEKMADALLFGNFGVQNITAAIQLYESLAKEGSCKAQNALGFLSSYGIGMEYDQAKALIYYT 207
Cdd:COG0790 58 AKALKSYEKAAELGDAAALALLGQMYGAGKGVSRDKTKAADWYRCAAADGLAEALFNLGLMYANGRGVPLDLVKALKYYE 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768014510 208 FGSAGGN---MMSQMILGYRYLSGINvlqncevalsyykkvadyiadtfeksegvpvekvslgqlhligRKGLDQDYYKA 284
Cdd:COG0790 138 KAAKLGNveaALAMYRLGLAYLSGLQ-------------------------------------------ALAVAYDDKKA 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768014510 285 LHYFLKAAKAGSANAMAFIGKMYLEGnAAVPQNNATAFKYFSMAASKGNAIGLHGLGLLYFHGKGVP----------LNY 354
Cdd:COG0790 175 LYLYRKAAELGNPDAQLLLGRMYEKG-LGVPRDLKKAFRWYKKAAEQGDGAACYNLGLMYLNGEGVKkaafltaakeEDK 253
|
250 260
....*....|....*....|..
gi 768014510 355 AEALKYFQKAAEKGWPDAQFQL 376
Cdd:COG0790 254 KQALEWLQKACELGFDNACEAL 275
|
|
| TPR |
COG0790 |
TPR repeat [Signal transduction mechanisms]; |
125-301 |
2.76e-14 |
|
TPR repeat [Signal transduction mechanisms];
Pssm-ID: 223861 [Multi-domain] Cd Length: 292 Bit Score: 73.93 E-value: 2.76e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768014510 125 KQKEEAYLLFAKAADMGNLKAMEKMADALLFGNFGVQNITAAIQLYESLAKEGSCKAQNALGFLSSY------GIGMEYD 198
Cdd:COG0790 91 RDKTKAADWYRCAAADGLAEALFNLGLMYANGRGVPLDLVKALKYYEKAAKLGNVEAALAMYRLGLAylsglqALAVAYD 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768014510 199 QAKALIYYTFGSAGGNMMSQMILGYRYLSGINVLQNCEVALSYYKKVADYIADTFEKSEGVPVEKVSLGQLHLIGRKGLD 278
Cdd:COG0790 171 DKKALYLYRKAAELGNPDAQLLLGRMYEKGLGVPRDLKKAFRWYKKAAEQGDGAACYNLGLMYLNGEGVKKAAFLTAAKE 250
|
170 180
....*....|....*....|...
gi 768014510 279 QDYYKALHYFLKAAKAGSANAMA 301
Cdd:COG0790 251 EDKKQALEWLQKACELGFDNACE 273
|
|
| Sel1 |
pfam08238 |
Sel1 repeat; This short repeat is found in the Sel1 protein. It is related to TPR repeats. |
551-583 |
1.76e-06 |
|
Sel1 repeat; This short repeat is found in the Sel1 protein. It is related to TPR repeats.
Pssm-ID: 429881 [Multi-domain] Cd Length: 35 Bit Score: 44.82 E-value: 1.76e-06
10 20 30
....*....|....*....|....*....|...
gi 768014510 551 AQAMFNLAYMYEHGLGITKDIHLARRLYDMAAQ 583
Cdd:pfam08238 1 AEAQYRLGYLYLYGLGVPKDPEKALEWYEKAAE 33
|
|
| SEL1 |
smart00671 |
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences. |
551-583 |
2.06e-06 |
|
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.
Pssm-ID: 214772 [Multi-domain] Cd Length: 36 Bit Score: 44.47 E-value: 2.06e-06
10 20 30
....*....|....*....|....*....|...
gi 768014510 551 AQAMFNLAYMYEHGLGITKDIHLARRLYDMAAQ 583
Cdd:smart00671 1 AEAQYNLGQMYEYGLGVPKDLEKALEYYKKAAE 33
|
|
| SEL1 |
smart00671 |
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences. |
370-404 |
2.88e-06 |
|
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.
Pssm-ID: 214772 [Multi-domain] Cd Length: 36 Bit Score: 44.09 E-value: 2.88e-06
10 20 30
....*....|....*....|....*....|....*
gi 768014510 370 PDAQFQLGFMYYSGSGIWKDYKLAFKYFYLASQSG 404
Cdd:smart00671 1 AEAQYNLGQMYEYGLGVPKDLEKALEYYKKAAELG 35
|
|
| SEL1 |
smart00671 |
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences. |
334-368 |
4.48e-06 |
|
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.
Pssm-ID: 214772 [Multi-domain] Cd Length: 36 Bit Score: 43.70 E-value: 4.48e-06
10 20 30
....*....|....*....|....*....|....*
gi 768014510 334 AIGLHGLGLLYFHGKGVPLNYAEALKYFQKAAEKG 368
Cdd:smart00671 1 AEAQYNLGQMYEYGLGVPKDLEKALEYYKKAAELG 35
|
|
| Sel1 |
pfam08238 |
Sel1 repeat; This short repeat is found in the Sel1 protein. It is related to TPR repeats. |
334-368 |
7.89e-06 |
|
Sel1 repeat; This short repeat is found in the Sel1 protein. It is related to TPR repeats.
Pssm-ID: 429881 [Multi-domain] Cd Length: 35 Bit Score: 42.89 E-value: 7.89e-06
10 20 30
....*....|....*....|....*....|....*
gi 768014510 334 AIGLHGLGLLYFHGKGVPLNYAEALKYFQKAAEKG 368
Cdd:pfam08238 1 AEAQYRLGYLYLYGLGVPKDPEKALEWYEKAAELG 35
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
18-128 |
4.19e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 46.55 E-value: 4.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768014510 18 IKTIKAEEHNKRQKERNVTTQVS-----VNEIKQYLSHILEQRTSSNV--------INKRENLLEKKKNQRKIRIKGIQN 84
Cdd:TIGR04523 309 NKELKSELKNQEKKLEEIQNQISqnnkiISQLNEQISQLKKELTNSESensekqreLEEKQNEIEKLKKENQSYKQEIKN 388
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 768014510 85 kdiLKRNKNHLQKQAEKNftDEGDQLFKMGIKVLQQSKSQKQKE 128
Cdd:TIGR04523 389 ---LESQINDLESKIQNQ--EKLNQQKDEQIKKLQQEKELLEKE 427
|
|
| SEL1 |
smart00671 |
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences. |
406-441 |
1.27e-04 |
|
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.
Pssm-ID: 214772 [Multi-domain] Cd Length: 36 Bit Score: 39.46 E-value: 1.27e-04
10 20 30
....*....|....*....|....*....|....*.
gi 768014510 406 PLAIYYLAKMYATGTGVVRSCRTAVELYKGVCELGH 441
Cdd:smart00671 1 AEAQYNLGQMYEYGLGVPKDLEKALEYYKKAAELGN 36
|
|
| Sel1 |
pfam08238 |
Sel1 repeat; This short repeat is found in the Sel1 protein. It is related to TPR repeats. |
370-404 |
2.18e-04 |
|
Sel1 repeat; This short repeat is found in the Sel1 protein. It is related to TPR repeats.
Pssm-ID: 429881 [Multi-domain] Cd Length: 35 Bit Score: 38.66 E-value: 2.18e-04
10 20 30
....*....|....*....|....*....|....*
gi 768014510 370 PDAQFQLGFMYYSGSGIWKDYKLAFKYFYLASQSG 404
Cdd:pfam08238 1 AEAQYRLGYLYLYGLGVPKDPEKALEWYEKAAELG 35
|
|
| SEL1 |
smart00671 |
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences. |
297-333 |
3.61e-03 |
|
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.
Pssm-ID: 214772 [Multi-domain] Cd Length: 36 Bit Score: 35.23 E-value: 3.61e-03
10 20 30
....*....|....*....|....*....|....*..
gi 768014510 297 ANAMAFIGKMYLEGNAaVPQNNATAFKYFSMAASKGN 333
Cdd:smart00671 1 AEAQYNLGQMYEYGLG-VPKDLEKALEYYKKAAELGN 36
|
|
| SEL1 |
smart00671 |
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences. |
514-549 |
4.81e-03 |
|
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.
Pssm-ID: 214772 [Multi-domain] Cd Length: 36 Bit Score: 35.23 E-value: 4.81e-03
10 20 30
....*....|....*....|....*....|....*.
gi 768014510 514 AFARVKIGDYHYYGYGTKKDYQTAATHYSIAANKYH 549
Cdd:smart00671 1 AEAQYNLGQMYEYGLGVPKDLEKALEYYKKAAELGN 36
|
|
|