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Conserved domains on  [gi|891602174|ref|XP_013025654|]
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F1-ATPase subunit H [Schizosaccharomyces cryophilus OY26]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP_sub_h super family cl11368
ATP synthase complex subunit h; Subunit h is a component of the yeast mitochondrial F1-F0 ATP ...
 14-77 5.29e-13

ATP synthase complex subunit h; Subunit h is a component of the yeast mitochondrial F1-F0 ATP synthase. It is essential for the correct assembly and functioning of this enzyme. Subunit h occupies a central place in the peripheral stalk between the F1 sector and the membrane.


The actual alignment was detected with superfamily member pfam10775:

Pssm-ID: 431488  Cd Length: 67  Bit Score: 58.80  E-value: 5.29e-13
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 891602174   14 YATTAPRATDSLQNIYISALKSYKPKATPAAAAVEA-KEWVMPAAPTAPNYDLDFSSALDSYKYD 77
Cdd:pfam10775   1 FSTTAVRRKDLVQDLYLKELKAYKPPPVKAADAEGQvKKWSLPAAPKAPELEADLASELKAYEAQ 65
 
Name Accession Description Interval E-value
ATP_sub_h pfam10775
ATP synthase complex subunit h; Subunit h is a component of the yeast mitochondrial F1-F0 ATP ...
 14-77 5.29e-13

ATP synthase complex subunit h; Subunit h is a component of the yeast mitochondrial F1-F0 ATP synthase. It is essential for the correct assembly and functioning of this enzyme. Subunit h occupies a central place in the peripheral stalk between the F1 sector and the membrane.


Pssm-ID: 431488  Cd Length: 67  Bit Score: 58.80  E-value: 5.29e-13
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 891602174   14 YATTAPRATDSLQNIYISALKSYKPKATPAAAAVEA-KEWVMPAAPTAPNYDLDFSSALDSYKYD 77
Cdd:pfam10775   1 FSTTAVRRKDLVQDLYLKELKAYKPPPVKAADAEGQvKKWSLPAAPKAPELEADLASELKAYEAQ 65
 
Name Accession Description Interval E-value
ATP_sub_h pfam10775
ATP synthase complex subunit h; Subunit h is a component of the yeast mitochondrial F1-F0 ATP ...
 14-77 5.29e-13

ATP synthase complex subunit h; Subunit h is a component of the yeast mitochondrial F1-F0 ATP synthase. It is essential for the correct assembly and functioning of this enzyme. Subunit h occupies a central place in the peripheral stalk between the F1 sector and the membrane.


Pssm-ID: 431488  Cd Length: 67  Bit Score: 58.80  E-value: 5.29e-13
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 891602174   14 YATTAPRATDSLQNIYISALKSYKPKATPAAAAVEA-KEWVMPAAPTAPNYDLDFSSALDSYKYD 77
Cdd:pfam10775   1 FSTTAVRRKDLVQDLYLKELKAYKPPPVKAADAEGQvKKWSLPAAPKAPELEADLASELKAYEAQ 65
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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