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Conserved domains on  [gi|1034639202|ref|XP_016863469|]
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zinc finger protein 718 isoform X1 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
KRAB super family cl42959
krueppel associated box;
1-32 7.44e-11

krueppel associated box;


The actual alignment was detected with superfamily member smart00349:

Pssm-ID: 214630 [Multi-domain]  Cd Length: 61  Bit Score: 57.60  E-value: 7.44e-11
                           10        20        30
                   ....*....|....*....|....*....|..
gi 1034639202    1 MLENYRNLVSLGVSISNPDLVTSLEQRKEPYN 32
Cdd:smart00349  30 MLENYSNLVSLGFQVPKPDLISQLEQGEEPWI 61
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
193-354 2.27e-07

FOG: Zn-finger [General function prediction only];


:

Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 52.78  E-value: 2.27e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034639202 193 KFYKCEECGKGFTRSSHLTKHKR--IHTGE--KPYIC--EKCGKAFNQSSTLNLHKRIHSAQKYYKCEEC-------GKA 259
Cdd:COG5048   288 LPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCpySLCGKLFSRNDALKRHILLHTSISPAKEKLLnssskfsPLL 367

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034639202 260 FKWSSSLNEHKRIHAGEKPFSCE--ECGNVFTTSSDFAKHKRIHTGEKPY--KCEECGKSFNRSTTLTTHKRIHTGEKPY 335
Cdd:COG5048   368 NNEPPQSLQQYKDLKNDKKSETLsnSCIRNFKRDSNLSLHIITHLSFRPYncKNPPCSKSFNRHYNLIPHKKIHTNHAPL 447

                         170
                  ....*....|....*....
gi 1034639202 336 TCEECGKAFNWSSTLNVHK 354
Cdd:COG5048   448 LCSILKSFRRDLDLSNHGK 466
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
290-442 7.62e-07

FOG: Zn-finger [General function prediction only];


:

Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 51.24  E-value: 7.62e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034639202 290 TSSDFAKHKRIHTgekPYKCEECGKSFNRSTTLTTHKR--IHTGE--KPYTCEE--CGKAFNWSSTLNVHKRIHSGKNPY 363
Cdd:COG5048   276 NESDSSSEKGFSL---PIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslCGKLFSRNDALKRHILLHTSISPA 352

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034639202 364 KC--EDCGKAFKVFAN-----LHNHKKIHTGEKPYIC--KQCGKAFKQSSHLNKHKKIHTVDKPY--KCKECGKAFKQYS 432
Cdd:COG5048   353 KEklLNSSSKFSPLLNneppqSLQQYKDLKNDKKSETlsNSCIRNFKRDSNLSLHIITHLSFRPYncKNPPCSKSFNRHY 432

                         170
                  ....*....|
gi 1034639202 433 NLPQHKRTHT 442
Cdd:COG5048   433 NLIPHKKIHT 442
zf-H2C2_2 pfam13465
Zinc-finger double domain;
153-177 3.74e-03

Zinc-finger double domain;


:

Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 34.65  E-value: 3.74e-03
                          10        20
                  ....*....|....*....|....*
gi 1034639202 153 RLTQHKRIHTGENPYTCEECGKAFN 177
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFK 25
 
Name Accession Description Interval E-value
KRAB smart00349
krueppel associated box;
1-32 7.44e-11

krueppel associated box;


Pssm-ID: 214630 [Multi-domain]  Cd Length: 61  Bit Score: 57.60  E-value: 7.44e-11
                           10        20        30
                   ....*....|....*....|....*....|..
gi 1034639202    1 MLENYRNLVSLGVSISNPDLVTSLEQRKEPYN 32
Cdd:smart00349  30 MLENYSNLVSLGFQVPKPDLISQLEQGEEPWI 61
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
193-354 2.27e-07

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 52.78  E-value: 2.27e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034639202 193 KFYKCEECGKGFTRSSHLTKHKR--IHTGE--KPYIC--EKCGKAFNQSSTLNLHKRIHSAQKYYKCEEC-------GKA 259
Cdd:COG5048   288 LPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCpySLCGKLFSRNDALKRHILLHTSISPAKEKLLnssskfsPLL 367

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034639202 260 FKWSSSLNEHKRIHAGEKPFSCE--ECGNVFTTSSDFAKHKRIHTGEKPY--KCEECGKSFNRSTTLTTHKRIHTGEKPY 335
Cdd:COG5048   368 NNEPPQSLQQYKDLKNDKKSETLsnSCIRNFKRDSNLSLHIITHLSFRPYncKNPPCSKSFNRHYNLIPHKKIHTNHAPL 447

                         170
                  ....*....|....*....
gi 1034639202 336 TCEECGKAFNWSSTLNVHK 354
Cdd:COG5048   448 LCSILKSFRRDLDLSNHGK 466
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
290-442 7.62e-07

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 51.24  E-value: 7.62e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034639202 290 TSSDFAKHKRIHTgekPYKCEECGKSFNRSTTLTTHKR--IHTGE--KPYTCEE--CGKAFNWSSTLNVHKRIHSGKNPY 363
Cdd:COG5048   276 NESDSSSEKGFSL---PIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslCGKLFSRNDALKRHILLHTSISPA 352

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034639202 364 KC--EDCGKAFKVFAN-----LHNHKKIHTGEKPYIC--KQCGKAFKQSSHLNKHKKIHTVDKPY--KCKECGKAFKQYS 432
Cdd:COG5048   353 KEklLNSSSKFSPLLNneppqSLQQYKDLKNDKKSETlsNSCIRNFKRDSNLSLHIITHLSFRPYncKNPPCSKSFNRHY 432

                         170
                  ....*....|
gi 1034639202 433 NLPQHKRTHT 442
Cdd:COG5048   433 NLIPHKKIHT 442
zf-H2C2_2 pfam13465
Zinc-finger double domain;
405-430 2.35e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 38.12  E-value: 2.35e-04
                          10        20
                  ....*....|....*....|....*.
gi 1034639202 405 HLNKHKKIHTVDKPYKCKECGKAFKQ 430
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
293-318 5.05e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 37.35  E-value: 5.05e-04
                          10        20
                  ....*....|....*....|....*.
gi 1034639202 293 DFAKHKRIHTGEKPYKCEECGKSFNR 318
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
153-177 3.74e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 34.65  E-value: 3.74e-03
                          10        20
                  ....*....|....*....|....*
gi 1034639202 153 RLTQHKRIHTGENPYTCEECGKAFN 177
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFK 25
 
Name Accession Description Interval E-value
KRAB smart00349
krueppel associated box;
1-32 7.44e-11

krueppel associated box;


Pssm-ID: 214630 [Multi-domain]  Cd Length: 61  Bit Score: 57.60  E-value: 7.44e-11
                           10        20        30
                   ....*....|....*....|....*....|..
gi 1034639202    1 MLENYRNLVSLGVSISNPDLVTSLEQRKEPYN 32
Cdd:smart00349  30 MLENYSNLVSLGFQVPKPDLISQLEQGEEPWI 61
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
193-354 2.27e-07

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 52.78  E-value: 2.27e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034639202 193 KFYKCEECGKGFTRSSHLTKHKR--IHTGE--KPYIC--EKCGKAFNQSSTLNLHKRIHSAQKYYKCEEC-------GKA 259
Cdd:COG5048   288 LPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCpySLCGKLFSRNDALKRHILLHTSISPAKEKLLnssskfsPLL 367

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034639202 260 FKWSSSLNEHKRIHAGEKPFSCE--ECGNVFTTSSDFAKHKRIHTGEKPY--KCEECGKSFNRSTTLTTHKRIHTGEKPY 335
Cdd:COG5048   368 NNEPPQSLQQYKDLKNDKKSETLsnSCIRNFKRDSNLSLHIITHLSFRPYncKNPPCSKSFNRHYNLIPHKKIHTNHAPL 447

                         170
                  ....*....|....*....
gi 1034639202 336 TCEECGKAFNWSSTLNVHK 354
Cdd:COG5048   448 LCSILKSFRRDLDLSNHGK 466
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
290-442 7.62e-07

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 51.24  E-value: 7.62e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034639202 290 TSSDFAKHKRIHTgekPYKCEECGKSFNRSTTLTTHKR--IHTGE--KPYTCEE--CGKAFNWSSTLNVHKRIHSGKNPY 363
Cdd:COG5048   276 NESDSSSEKGFSL---PIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslCGKLFSRNDALKRHILLHTSISPA 352

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034639202 364 KC--EDCGKAFKVFAN-----LHNHKKIHTGEKPYIC--KQCGKAFKQSSHLNKHKKIHTVDKPY--KCKECGKAFKQYS 432
Cdd:COG5048   353 KEklLNSSSKFSPLLNneppqSLQQYKDLKNDKKSETlsNSCIRNFKRDSNLSLHIITHLSFRPYncKNPPCSKSFNRHY 432

                         170
                  ....*....|
gi 1034639202 433 NLPQHKRTHT 442
Cdd:COG5048   433 NLIPHKKIHT 442
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
136-443 5.10e-06

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 48.54  E-value: 5.10e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034639202 136 DKTFKCKECGKSFHVLSRLTQHKRIHTGENPYTCEECGKAFNWSSILTKHKRIHAREKFYKCEECGKGFTRSSHLTKHKR 215
Cdd:COG5048    31 PRPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYSGCDKSFSRPLELSRHLRTHHNNPSDLNSKSLPLSNSKASSSSL 110

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034639202 216 IHTGEKPYICEKC-GKAFNQSSTLNLHKRIHSAQKYYKCEECGKAFKWSSSLNEHKRIHAGEKPFSCEEcgnvFTTSSDF 294
Cdd:COG5048   111 SSSSSNSNDNNLLsSHSLPPSSRDPQLPDLLSISNLRNNPLPGNNSSSVNTPQSNSLHPPLPANSLSKD----PSSNLSL 186

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034639202 295 AKHKRIHTGEKPYKCEECGKSFNRSTTLTTHKRIHTGEKPYTCEECGKAFNWSSTLNVHKRIHSGKNPYKCEDCGKAFKV 374
Cdd:COG5048   187 LISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSSASESPRSSLP 266

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034639202 375 FANLHNHKKIHTGE-------KPYICKQCGKAFKQSSHLNKHK--KIHT--VDKPYKCKE--CGKAFKQYSNLPQHKRTH 441
Cdd:COG5048   267 TASSQSSSPNESDSssekgfsLPIKSKQCNISFSRSSPLTRHLrsVNHSgeSLKPFSCPYslCGKLFSRNDALKRHILLH 346


                  ..
gi 1034639202 442 TG 443
Cdd:COG5048   347 TS 348
zf-H2C2_2 pfam13465
Zinc-finger double domain;
405-430 2.35e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 38.12  E-value: 2.35e-04
                          10        20
                  ....*....|....*....|....*.
gi 1034639202 405 HLNKHKKIHTVDKPYKCKECGKAFKQ 430
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
293-318 5.05e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 37.35  E-value: 5.05e-04
                          10        20
                  ....*....|....*....|....*.
gi 1034639202 293 DFAKHKRIHTGEKPYKCEECGKSFNR 318
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
251-411 5.08e-04

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 42.38  E-value: 5.08e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034639202 251 YKCEECGKAFKWSSSLNEHKR--IHAGE--KPFSCEE--CGNVFTTSSDFAKHKRIHTGEKPYKCEEC-------GKSFN 317
Cdd:COG5048   290 IKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslCGKLFSRNDALKRHILLHTSISPAKEKLLnssskfsPLLNN 369

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034639202 318 RSTTLTTHKRIHTGEKPYTCE--ECGKAFNWSSTLNVHKRIHSGKNPYKCED--CGKAFKVFANLHNHKKIHTgEKPYIC 393
Cdd:COG5048   370 EPPQSLQQYKDLKNDKKSETLsnSCIRNFKRDSNLSLHIITHLSFRPYNCKNppCSKSFNRHYNLIPHKKIHT-NHAPLL 448

                         170
                  ....*....|....*...
gi 1034639202 394 KQCGKAFKQSSHLNKHKK 411
Cdd:COG5048   449 CSILKSFRRDLDLSNHGK 466
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 359-442 1.15e-03

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 41.24  E-value: 1.15e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034639202 359 GKNPYKCE--DCGKAFKVFANLHNHKKiHtgekpyicKQCGKAFKQSSHLNKHKKIHTVDKPYKCKECGKAFKQYSNLPQ 436
Cdd:COG5189   346 DGKPYKCPveGCNKKYKNQNGLKYHML-H--------GHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKY 416


                  ....*.
gi 1034639202 437 HkRTHT 442
Cdd:COG5189   417 H-RKHS 421
zf-H2C2_2 pfam13465
Zinc-finger double domain;
322-345 1.83e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.81  E-value: 1.83e-03
                          10        20
                  ....*....|....*....|....
gi 1034639202 322 LTTHKRIHTGEKPYTCEECGKAFN 345
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFK 25
zf-C2H2 pfam00096
Zinc finger, C2H2 type; The C2H2 zinc finger is the classical zinc finger domain. The two ...
 195-217 3.41e-03

Zinc finger, C2H2 type; The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter.


Pssm-ID: 395048 [Multi-domain]  Cd Length: 23  Bit Score: 34.97  E-value: 3.41e-03
                          10        20
                  ....*....|....*....|...
gi 1034639202 195 YKCEECGKGFTRSSHLTKHKRIH 217
Cdd:pfam00096   1 YKCPDCGKSFSRKSNLKRHLRTH 23
zf-H2C2_2 pfam13465
Zinc-finger double domain;
153-177 3.74e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 34.65  E-value: 3.74e-03
                          10        20
                  ....*....|....*....|....*
gi 1034639202 153 RLTQHKRIHTGENPYTCEECGKAFN 177
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFK 25
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
139-298 3.90e-03

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 39.29  E-value: 3.90e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034639202 139 FKCKECGKSFHVLSRLTQHKR--IHTGENPYTCEE----CGKAFNWSSILTKHKRIHAREKFYKC--EECGKGFTRSSH- 209
Cdd:COG5048   290 IKSKQCNISFSRSSPLTRHLRsvNHSGESLKPFSCpyslCGKLFSRNDALKRHILLHTSISPAKEklLNSSSKFSPLLNn 369

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034639202 210 ----LTKHKRIHTGEKPYICE--KCGKAFNQSSTLNLHKRIHSAQKY--YKCEECGKAFKWSSSLNEHKRIHAGEKPFSC 281
Cdd:COG5048   370 eppqSLQQYKDLKNDKKSETLsnSCIRNFKRDSNLSLHIITHLSFRPynCKNPPCSKSFNRHYNLIPHKKIHTNHAPLLC 449

                         170
                  ....*....|....*..
gi 1034639202 282 EECGNVFTTSSDFAKHK 298
Cdd:COG5048   450 SILKSFRRDLDLSNHGK 466
zf-H2C2_2 pfam13465
Zinc-finger double domain;
209-234 5.49e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 34.27  E-value: 5.49e-03
                          10        20
                  ....*....|....*....|....*.
gi 1034639202 209 HLTKHKRIHTGEKPYICEKCGKAFNQ 234
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 248-326 6.37e-03

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 38.93  E-value: 6.37e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034639202 248 QKYYKCE--ECGKAFKWSSSLNEHkRIHAgekpfsceECGNVFTTSSDFAKHKRIHTGEKPYKCEECGKSFNRSTTLTTH 325
Cdd:COG5189   347 GKPYKCPveGCNKKYKNQNGLKYH-MLHG--------HQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYH 417


                  .
gi 1034639202 326 K 326
Cdd:COG5189   418 R 418
zf-H2C2_2 pfam13465
Zinc-finger double domain;
350-373 9.06e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 33.50  E-value: 9.06e-03
                          10        20
                  ....*....|....*....|....
gi 1034639202 350 LNVHKRIHSGKNPYKCEDCGKAFK 373
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFK 25
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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