NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1034600604|ref|XP_016880386|]
View 

neuroligin-2 isoform X3 [Homo sapiens]

Protein Classification

carboxylesterase/lipase family protein( domain architecture ID 10444481)

carboxylesterase/lipase family protein similar to carboxylesterase, which catalyzes the hydrolysis of a carboxylic ester to form an alcohol and a carboxylate, and lipase, which hydrolyzes triglycerides into diglycerides and subsequently into monoglycerides and free fatty acids

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
COesterase pfam00135
Carboxylesterase family;
1-422 0e+00

Carboxylesterase family;


:

Pssm-ID: 395084 [Multi-domain]  Cd Length: 513  Bit Score: 538.82  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034600604   1 MLFLHGGSYMEGTGNMFDGSVLAAYGNVIVATLNYRLGVLGFLSTGDQAAKGNYGLLDQIQALRWLSENIAHFGGDPERI 80
Cdd:pfam00135 106 MVWIHGGGFMFGSGSLYDGSYLAAEGDVIVVTINYRLGPLGFLSTGDDEAPGNYGLLDQVLALRWVQENIASFGGDPNRV 185
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034600604  81 TIFGSGAGASCVNLLILSHHSEGLFQKAIAQSGTAISSWSVNYQPLKYTRLLAAKVGCDREDSAEAVECLRRKPSRELVD 160
Cdd:pfam00135 186 TLFGESAGAASVSLLLLSPLSKGLFHRAILMSGSALSPWAIQSNARQRAKELAKLVGCPTSDSAELVECLRSKPAEELLD 265
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034600604 161 QD----VQPARYHIAFGPVVDGDVVPDDPEILMQQGEFLNYDMLIGVNQGEGLKFVEDSAESEDGVSASAFDFTVSNFVD 236
Cdd:pfam00135 266 AQlkllVYGSVPFVPFGPVVDGDFLPEHPEELLKSGNFPKVPLLIGVTKDEGLLFAAYILDNVDILKALEEKLLRSLLID 345
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034600604 237 NLYGYPEG-KDVLRETIKFMYTDWADRDNGEMRRKTLLALFTDHQWVAPAVATAKLHADYQSPVYFYTFYHHCQAEGRPE 315
Cdd:pfam00135 346 LLYLLLVDlPEEISAALREEYLDWGDRDDPETSRRALVELLTDYLFNCPVIRFADLHASRGTPVYMYSFDYRGSSLRYPK 425
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034600604 316 WADAAHGDELPYVFGVPMVGATdlfpcNFSKNDVMLSAVVMTYWTNFAKTGDPNQPvpqdtkfihtkpnrFEEVVWSKFN 395
Cdd:pfam00135 426 WVGVDHGDELPYVFGTPFVGAL-----LFTEEDEKLSRKMMTYWTNFAKTGNPNGP--------------EGLPKWPPYT 486
                         410       420
                  ....*....|....*....|....*..
gi 1034600604 396 SKEKQYLHIGLKPRVRDNYRANKVAFW 422
Cdd:pfam00135 487 DENGQYLSIDLEPRVKQGLKAERCAFW 513
 
Name Accession Description Interval E-value
COesterase pfam00135
Carboxylesterase family;
1-422 0e+00

Carboxylesterase family;


Pssm-ID: 395084 [Multi-domain]  Cd Length: 513  Bit Score: 538.82  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034600604   1 MLFLHGGSYMEGTGNMFDGSVLAAYGNVIVATLNYRLGVLGFLSTGDQAAKGNYGLLDQIQALRWLSENIAHFGGDPERI 80
Cdd:pfam00135 106 MVWIHGGGFMFGSGSLYDGSYLAAEGDVIVVTINYRLGPLGFLSTGDDEAPGNYGLLDQVLALRWVQENIASFGGDPNRV 185
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034600604  81 TIFGSGAGASCVNLLILSHHSEGLFQKAIAQSGTAISSWSVNYQPLKYTRLLAAKVGCDREDSAEAVECLRRKPSRELVD 160
Cdd:pfam00135 186 TLFGESAGAASVSLLLLSPLSKGLFHRAILMSGSALSPWAIQSNARQRAKELAKLVGCPTSDSAELVECLRSKPAEELLD 265
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034600604 161 QD----VQPARYHIAFGPVVDGDVVPDDPEILMQQGEFLNYDMLIGVNQGEGLKFVEDSAESEDGVSASAFDFTVSNFVD 236
Cdd:pfam00135 266 AQlkllVYGSVPFVPFGPVVDGDFLPEHPEELLKSGNFPKVPLLIGVTKDEGLLFAAYILDNVDILKALEEKLLRSLLID 345
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034600604 237 NLYGYPEG-KDVLRETIKFMYTDWADRDNGEMRRKTLLALFTDHQWVAPAVATAKLHADYQSPVYFYTFYHHCQAEGRPE 315
Cdd:pfam00135 346 LLYLLLVDlPEEISAALREEYLDWGDRDDPETSRRALVELLTDYLFNCPVIRFADLHASRGTPVYMYSFDYRGSSLRYPK 425
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034600604 316 WADAAHGDELPYVFGVPMVGATdlfpcNFSKNDVMLSAVVMTYWTNFAKTGDPNQPvpqdtkfihtkpnrFEEVVWSKFN 395
Cdd:pfam00135 426 WVGVDHGDELPYVFGTPFVGAL-----LFTEEDEKLSRKMMTYWTNFAKTGNPNGP--------------EGLPKWPPYT 486
                         410       420
                  ....*....|....*....|....*..
gi 1034600604 396 SKEKQYLHIGLKPRVRDNYRANKVAFW 422
Cdd:pfam00135 487 DENGQYLSIDLEPRVKQGLKAERCAFW 513
Esterase_lipase cd00312
Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on ...
1-408 7.17e-99

Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.


Pssm-ID: 238191 [Multi-domain]  Cd Length: 493  Bit Score: 311.57  E-value: 7.17e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034600604   1 MLFLHGGSYMEGTGNMFDGSVLAAYG-NVIVATLNYRLGVLGFLSTGDQAAKGNYGLLDQIQALRWLSENIAHFGGDPER 79
Cdd:cd00312    98 MVWIHGGGFMFGSGSLYPGDGLAREGdNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAFGGDPDS 177
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034600604  80 ITIFGSGAGASCVNLLILSHHSEGLFQKAIAQSGTAISSWSVNYQPLKYTRLLAAKVGCDREDSAEAVECLRRKPSRELV 159
Cdd:cd00312   178 VTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSALSPWAIQENARGRAKRLARLLGCNDTSSAELLDCLRSKSAEELL 257
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034600604 160 D--QDVQPARY--HIAFGPVVDGDVVPDDPEILMQQGEFLNYDMLIGVNQGEGLKFvedsaesedGVSASAFDFTVSNFV 235
Cdd:cd00312   258 DatRKLLLFSYspFLPFGPVVDGDFIPDDPEELIKEGKFAKVPLIIGVTKDEGGYF---------AAMLLNFDAKLIIET 328
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034600604 236 DNL------YGYPEGKDVLRETIKFMYTDWadRDNGEMRRKTLLALFTDHQWVAPAVATAKLHADYQ-SPVYFYTFYHHC 308
Cdd:cd00312   329 NDRwlellpYLLFYADDALADKVLEKYPGD--VDDSVESRKNLSDMLTDLLFKCPARYFLAQHRKAGgSPVYAYVFDHRS 406
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034600604 309 Q--AEGRPEWADAAHGDELPYVFGVPmvgatdLFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPvpqdtkfihtkpnrF 386
Cdd:cd00312   407 SlsVGRWPPWLGTVHGDEIFFVFGNP------LLKEGLREEEEKLSRTMMKYWANFAKTGNPNTE--------------G 466
                         410       420
                  ....*....|....*....|..
gi 1034600604 387 EEVVWSKFNSKEKQYLHIGLKP 408
Cdd:cd00312   467 NLVVWPAYTSESEKYLDINIEG 488
PnbA COG2272
Carboxylesterase type B [Lipid transport and metabolism];
1-426 9.92e-83

Carboxylesterase type B [Lipid transport and metabolism];


Pssm-ID: 441873  Cd Length: 500  Bit Score: 269.45  E-value: 9.92e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034600604   1 MLFLHGGSYMEGTGN--MFDGSVLAAYGnVIVATLNYRLGVLGF-----LSTGDQAAKGNYGLLDQIQALRWLSENIAHF 73
Cdd:COG2272   108 MVWIHGGGFVSGSGSepLYDGAALARRG-VVVVTINYRLGALGFlalpaLSGESYGASGNYGLLDQIAALRWVRDNIAAF 186
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034600604  74 GGDPERITIFGSGAGASCVNLLILSHHSEGLFQKAIAQSGTAISSWSVNyQPLKYTRLLAAKVGCDREDsaeaVECLRRK 153
Cdd:COG2272   187 GGDPDNVTIFGESAGAASVAALLASPLAKGLFHRAIAQSGAGLSVLTLA-EAEAVGAAFAAALGVAPAT----LAALRAL 261
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034600604 154 PSREL--------------------VDQDVQPARYHIAFgpvvdgdvvpddpeilmQQGEFLNYDMLIGVNQGEGLKFVe 213
Cdd:COG2272   262 PAEELlaaqaalaaegpgglpfgpvVDGDVLPEDPLEAF-----------------AAGRAADVPLLIGTNRDEGRLFA- 323
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034600604 214 DSAESEDGVSASAFDftvsNFVDNLYGyPEGKDVLREtikfmYTDWADRDngemrrkTLLALFTDHQWVAPAVATAKLHA 293
Cdd:COG2272   324 ALLGDLGPLTAADYR----AALRRRFG-DDADEVLAA-----YPAASPAE-------ALAALATDRVFRCPARRLAEAHA 386
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034600604 294 DYQSPVYFYTFYHHcQAEGRPEWADAAHGDELPYVFGVPMVGatdlFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPvp 373
Cdd:COG2272   387 AAGAPVYLYRFDWR-SPPLRGFGLGAFHGAELPFVFGNLDAP----ALTGLTPADRALSDQMQAYWVNFARTGDPNGP-- 459
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1034600604 374 qdtkfihtkpnrfEEVVWSKFNSKEKQYLHIGLKPRV-RDNYRANKVAFWLELV 426
Cdd:COG2272   460 -------------GLPEWPAYDPEDRAVMVFDAEPRVvNDPDAEERLDLWDGVV 500
 
Name Accession Description Interval E-value
COesterase pfam00135
Carboxylesterase family;
1-422 0e+00

Carboxylesterase family;


Pssm-ID: 395084 [Multi-domain]  Cd Length: 513  Bit Score: 538.82  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034600604   1 MLFLHGGSYMEGTGNMFDGSVLAAYGNVIVATLNYRLGVLGFLSTGDQAAKGNYGLLDQIQALRWLSENIAHFGGDPERI 80
Cdd:pfam00135 106 MVWIHGGGFMFGSGSLYDGSYLAAEGDVIVVTINYRLGPLGFLSTGDDEAPGNYGLLDQVLALRWVQENIASFGGDPNRV 185
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034600604  81 TIFGSGAGASCVNLLILSHHSEGLFQKAIAQSGTAISSWSVNYQPLKYTRLLAAKVGCDREDSAEAVECLRRKPSRELVD 160
Cdd:pfam00135 186 TLFGESAGAASVSLLLLSPLSKGLFHRAILMSGSALSPWAIQSNARQRAKELAKLVGCPTSDSAELVECLRSKPAEELLD 265
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034600604 161 QD----VQPARYHIAFGPVVDGDVVPDDPEILMQQGEFLNYDMLIGVNQGEGLKFVEDSAESEDGVSASAFDFTVSNFVD 236
Cdd:pfam00135 266 AQlkllVYGSVPFVPFGPVVDGDFLPEHPEELLKSGNFPKVPLLIGVTKDEGLLFAAYILDNVDILKALEEKLLRSLLID 345
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034600604 237 NLYGYPEG-KDVLRETIKFMYTDWADRDNGEMRRKTLLALFTDHQWVAPAVATAKLHADYQSPVYFYTFYHHCQAEGRPE 315
Cdd:pfam00135 346 LLYLLLVDlPEEISAALREEYLDWGDRDDPETSRRALVELLTDYLFNCPVIRFADLHASRGTPVYMYSFDYRGSSLRYPK 425
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034600604 316 WADAAHGDELPYVFGVPMVGATdlfpcNFSKNDVMLSAVVMTYWTNFAKTGDPNQPvpqdtkfihtkpnrFEEVVWSKFN 395
Cdd:pfam00135 426 WVGVDHGDELPYVFGTPFVGAL-----LFTEEDEKLSRKMMTYWTNFAKTGNPNGP--------------EGLPKWPPYT 486
                         410       420
                  ....*....|....*....|....*..
gi 1034600604 396 SKEKQYLHIGLKPRVRDNYRANKVAFW 422
Cdd:pfam00135 487 DENGQYLSIDLEPRVKQGLKAERCAFW 513
Esterase_lipase cd00312
Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on ...
1-408 7.17e-99

Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.


Pssm-ID: 238191 [Multi-domain]  Cd Length: 493  Bit Score: 311.57  E-value: 7.17e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034600604   1 MLFLHGGSYMEGTGNMFDGSVLAAYG-NVIVATLNYRLGVLGFLSTGDQAAKGNYGLLDQIQALRWLSENIAHFGGDPER 79
Cdd:cd00312    98 MVWIHGGGFMFGSGSLYPGDGLAREGdNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAFGGDPDS 177
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034600604  80 ITIFGSGAGASCVNLLILSHHSEGLFQKAIAQSGTAISSWSVNYQPLKYTRLLAAKVGCDREDSAEAVECLRRKPSRELV 159
Cdd:cd00312   178 VTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSALSPWAIQENARGRAKRLARLLGCNDTSSAELLDCLRSKSAEELL 257
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034600604 160 D--QDVQPARY--HIAFGPVVDGDVVPDDPEILMQQGEFLNYDMLIGVNQGEGLKFvedsaesedGVSASAFDFTVSNFV 235
Cdd:cd00312   258 DatRKLLLFSYspFLPFGPVVDGDFIPDDPEELIKEGKFAKVPLIIGVTKDEGGYF---------AAMLLNFDAKLIIET 328
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034600604 236 DNL------YGYPEGKDVLRETIKFMYTDWadRDNGEMRRKTLLALFTDHQWVAPAVATAKLHADYQ-SPVYFYTFYHHC 308
Cdd:cd00312   329 NDRwlellpYLLFYADDALADKVLEKYPGD--VDDSVESRKNLSDMLTDLLFKCPARYFLAQHRKAGgSPVYAYVFDHRS 406
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034600604 309 Q--AEGRPEWADAAHGDELPYVFGVPmvgatdLFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPvpqdtkfihtkpnrF 386
Cdd:cd00312   407 SlsVGRWPPWLGTVHGDEIFFVFGNP------LLKEGLREEEEKLSRTMMKYWANFAKTGNPNTE--------------G 466
                         410       420
                  ....*....|....*....|..
gi 1034600604 387 EEVVWSKFNSKEKQYLHIGLKP 408
Cdd:cd00312   467 NLVVWPAYTSESEKYLDINIEG 488
PnbA COG2272
Carboxylesterase type B [Lipid transport and metabolism];
1-426 9.92e-83

Carboxylesterase type B [Lipid transport and metabolism];


Pssm-ID: 441873  Cd Length: 500  Bit Score: 269.45  E-value: 9.92e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034600604   1 MLFLHGGSYMEGTGN--MFDGSVLAAYGnVIVATLNYRLGVLGF-----LSTGDQAAKGNYGLLDQIQALRWLSENIAHF 73
Cdd:COG2272   108 MVWIHGGGFVSGSGSepLYDGAALARRG-VVVVTINYRLGALGFlalpaLSGESYGASGNYGLLDQIAALRWVRDNIAAF 186
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034600604  74 GGDPERITIFGSGAGASCVNLLILSHHSEGLFQKAIAQSGTAISSWSVNyQPLKYTRLLAAKVGCDREDsaeaVECLRRK 153
Cdd:COG2272   187 GGDPDNVTIFGESAGAASVAALLASPLAKGLFHRAIAQSGAGLSVLTLA-EAEAVGAAFAAALGVAPAT----LAALRAL 261
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034600604 154 PSREL--------------------VDQDVQPARYHIAFgpvvdgdvvpddpeilmQQGEFLNYDMLIGVNQGEGLKFVe 213
Cdd:COG2272   262 PAEELlaaqaalaaegpgglpfgpvVDGDVLPEDPLEAF-----------------AAGRAADVPLLIGTNRDEGRLFA- 323
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034600604 214 DSAESEDGVSASAFDftvsNFVDNLYGyPEGKDVLREtikfmYTDWADRDngemrrkTLLALFTDHQWVAPAVATAKLHA 293
Cdd:COG2272   324 ALLGDLGPLTAADYR----AALRRRFG-DDADEVLAA-----YPAASPAE-------ALAALATDRVFRCPARRLAEAHA 386
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034600604 294 DYQSPVYFYTFYHHcQAEGRPEWADAAHGDELPYVFGVPMVGatdlFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPvp 373
Cdd:COG2272   387 AAGAPVYLYRFDWR-SPPLRGFGLGAFHGAELPFVFGNLDAP----ALTGLTPADRALSDQMQAYWVNFARTGDPNGP-- 459
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1034600604 374 qdtkfihtkpnrfEEVVWSKFNSKEKQYLHIGLKPRV-RDNYRANKVAFWLELV 426
Cdd:COG2272   460 -------------GLPEWPAYDPEDRAVMVFDAEPRVvNDPDAEERLDLWDGVV 500
Aes COG0657
Acetyl esterase/lipase [Lipid transport and metabolism];
1-89 2.83e-11

Acetyl esterase/lipase [Lipid transport and metabolism];


Pssm-ID: 440422 [Multi-domain]  Cd Length: 207  Bit Score: 63.35  E-value: 2.83e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034600604   1 MLFLHGGSYMEGTGNMFDGSV--LAAYGNVIVATLNYRLgvlgflstgdqAAKGNY--GLLDQIQALRWLSENIAHFGGD 76
Cdd:COG0657    16 VVYFHGGGWVSGSKDTHDPLArrLAARAGAAVVSVDYRL-----------APEHPFpaALEDAYAALRWLRANAAELGID 84
                          90
                  ....*....|...
gi 1034600604  77 PERITIFGSGAGA 89
Cdd:COG0657    85 PDRIAVAGDSAGG 97
Abhydrolase_3 pfam07859
alpha/beta hydrolase fold; This catalytic domain is found in a very wide range of enzymes.
1-89 5.26e-08

alpha/beta hydrolase fold; This catalytic domain is found in a very wide range of enzymes.


Pssm-ID: 400284 [Multi-domain]  Cd Length: 208  Bit Score: 53.75  E-value: 5.26e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034600604   1 MLFLHGGSYMEGTGNMFDG--SVLAAYGNVIVATLNYRLgvlgflstgdqAAKGNY--GLLDQIQALRWLSENIAHFGGD 76
Cdd:pfam07859   1 LVYFHGGGFVLGSADTHDRlcRRLAAEAGAVVVSVDYRL-----------APEHPFpaAYDDAYAALRWLAEQAAELGAD 69
                          90
                  ....*....|...
gi 1034600604  77 PERITIFGSGAGA 89
Cdd:pfam07859  70 PSRIAVAGDSAGG 82
DAP2 COG1506
Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];
1-119 2.40e-05

Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];


Pssm-ID: 441115 [Multi-domain]  Cd Length: 234  Bit Score: 46.16  E-value: 2.40e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034600604   1 MLFLHGGSYMEGTGNMFDGSVLAAYGnVIVATLNYRlgvlGF-LSTGDQaakGNYGLLDQIQALRWLsenIAHFGGDPER 79
Cdd:COG1506    26 VVYVHGGPGSRDDSFLPLAQALASRG-YAVLAPDYR----GYgESAGDW---GGDEVDDVLAAIDYL---AARPYVDPDR 94
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 1034600604  80 ITIFGSGAGASCVnLLILSHHSEgLFQKAIAQSGtaISSW 119
Cdd:COG1506    95 IGIYGHSYGGYMA-LLAAARHPD-RFKAAVALAG--VSDL 130
BD-FAE pfam20434
BD-FAE; This family represents a novel bifunctional feruloyl and acetyl xylan esterase (BD-FAE, ...
1-89 9.01e-04

BD-FAE; This family represents a novel bifunctional feruloyl and acetyl xylan esterase (BD-FAE, previously known as bifunctional carbohydrate esterase (CE)), which is active on complex natural xylans and was identified as the basis of a monophyletic clade gathering all homologs identified in PULs (polysaccharide utilization loci) predicted to act on xylan. It adopts an alpha-beta-hydrolase fold with the catalytic triad Ser-Asp-His. This new family of proteins is a new candidate for biomass processing due to its capacity to remove ferulic acid and acetic acid from natural corn and birchwood xylan substrates.


Pssm-ID: 466583 [Multi-domain]  Cd Length: 215  Bit Score: 41.01  E-value: 9.01e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034600604   1 MLFLHGGSYMEGT--GNM-FDGSVLAAYGN--VIVATLNYRLgvlgflSTgdQAakgnyGLLDQIQ----ALRWLSENIA 71
Cdd:pfam20434  16 VIWIHGGGWNSGDkeADMgFMTNTVKALLKagYAVASINYRL------ST--DA-----KFPAQIQdvkaAIRFLRANAA 82
                          90
                  ....*....|....*...
gi 1034600604  72 HFGGDPERITIFGSGAGA 89
Cdd:pfam20434  83 KYGIDTNKIALMGFSAGG 100
Peptidase_S9 pfam00326
Prolyl oligopeptidase family;
20-119 8.09e-03

Prolyl oligopeptidase family;


Pssm-ID: 459761 [Multi-domain]  Cd Length: 213  Bit Score: 38.36  E-value: 8.09e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034600604  20 SVLAAYGnVIVATLNYR-LGVLG--FLSTGDQAAKGNyGLLDQIQALRWLsenIAHFGGDPERITIFGSGAGASCVNlLI 96
Cdd:pfam00326   8 QLLADRG-YVVAIANGRgSGGYGeaFHDAGKGDLGQN-EFDDFIAAAEYL---IEQGYTDPDRLAIWGGSYGGYLTG-AA 81
                          90       100
                  ....*....|....*....|...
gi 1034600604  97 LSHHSEgLFQKAIAQSGtaISSW 119
Cdd:pfam00326  82 LNQRPD-LFKAAVAHVP--VVDW 101
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH