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Conserved domains on  [gi|1370514024|ref|XP_024303219|]
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Fanconi anemia group C protein isoform X1 [Homo sapiens]

Protein Classification

Fanconi_C domain-containing protein( domain architecture ID 10489295)

Fanconi_C domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Fanconi_C pfam02106
Fanconi anaemia group C protein;
10-555 0e+00

Fanconi anaemia group C protein;


:

Pssm-ID: 426603  Cd Length: 547  Bit Score: 941.38  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370514024  10 CDYQFWMQKLSVWDQASTLETQQDTCLHVAQFQEFLRKMYEALKEMDSNTVIERFPTIGQLLAKACWNPFILAYDESQKI 89
Cdd:pfam02106   1 LNFQFWLDKAVAWGQATTLETQQDTCLHLPQLQEFLQQLYEALKSMNSTTAMKRFPLIGQLLGRLCWNPFVTAYDESQKL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370514024  90 LIWCLCCLINKEPQNSGQSKLNSWIQGVLSHILSALRfDKEVALFTQGLGYAPIDYYPGLLKNMVLSLASELRENHLNGF 169
Cdd:pfam02106  81 LLWCLCCLYSKEPQNAVERKANSWIRNLLCHLLSEEE-DSEVSAFIKHLGYTPKDYYPGLLKNMVLSLVEELRENCLNGF 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370514024 170 NTQRRMAPERVASLSRVCVPLITLTDVDPLVEALLICHGREPQEILQPEFFEAVNEAILLKKISLPMSAVVCLWLRHLPS 249
Cdd:pfam02106 160 NTQRRCSPERIRALSEACVPLVTLPDAAPLIEALLTYHGSCPQEVLSEEFLEAVNEAFLRKKISLPESAVVSLWLRHLPS 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370514024 250 LEKAMLHLFEKLISSERNCLRRIECFIKDSSLPQA-ACHPAIFRVVDEMFRCALLETDGALEIIATIQVFTQCFVEALEK 328
Cdd:pfam02106 240 LEKAVLHLLESLISSEGNSLQKLECLIKDSLLPQAsACHPAIFRVVNEIFRNVLLETDGAPEVLALIQVFTQCFVQALEK 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370514024 329 ASKQLRFALKTYFPYTSPSLAMVLLQDPQDIPRGHWLQTLKHISELLREAVEDQTHGSCGGPFESWFLFIHFGGWAEMVA 408
Cdd:pfam02106 320 ENKQLRFPLKAYFPYSPPSLVMPLLTDPSEVPQGAWLQHLKWISELLRELVEDEETRSCGNPFEAWFLLVHFGEWVDIAA 399
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370514024 409 EQLLMSAAEPPTALLWLLAFYYGPRDGRQQRAQTMVQVKAVLGHLLAMSRSSSLSAQDLQTVAGQGTDTDLRAP-AQQLI 487
Cdd:pfam02106 400 ELLVTSETEDPEALLWLLAFYYHPTNRGQQRAQTMVEAKEVWDHLRMLFRSHPLSAKDLQAVAGLLSPQDPRQSlTQQLI 479
                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1370514024 488 RHLLLNFLLWAPGGHTIAWDVITLMAHTAEITHEIIGFLDQTLYRWNRLGIESPRSEKLARELLKELR 555
Cdd:pfam02106 480 RHLLLNFLLFSPGGHSIAAEVIQKVAHTSGIRDEAIGLLDSTLYRLNRLGSEAPRVHKLARELLQELQ 547
 
Name Accession Description Interval E-value
Fanconi_C pfam02106
Fanconi anaemia group C protein;
10-555 0e+00

Fanconi anaemia group C protein;


Pssm-ID: 426603  Cd Length: 547  Bit Score: 941.38  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370514024  10 CDYQFWMQKLSVWDQASTLETQQDTCLHVAQFQEFLRKMYEALKEMDSNTVIERFPTIGQLLAKACWNPFILAYDESQKI 89
Cdd:pfam02106   1 LNFQFWLDKAVAWGQATTLETQQDTCLHLPQLQEFLQQLYEALKSMNSTTAMKRFPLIGQLLGRLCWNPFVTAYDESQKL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370514024  90 LIWCLCCLINKEPQNSGQSKLNSWIQGVLSHILSALRfDKEVALFTQGLGYAPIDYYPGLLKNMVLSLASELRENHLNGF 169
Cdd:pfam02106  81 LLWCLCCLYSKEPQNAVERKANSWIRNLLCHLLSEEE-DSEVSAFIKHLGYTPKDYYPGLLKNMVLSLVEELRENCLNGF 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370514024 170 NTQRRMAPERVASLSRVCVPLITLTDVDPLVEALLICHGREPQEILQPEFFEAVNEAILLKKISLPMSAVVCLWLRHLPS 249
Cdd:pfam02106 160 NTQRRCSPERIRALSEACVPLVTLPDAAPLIEALLTYHGSCPQEVLSEEFLEAVNEAFLRKKISLPESAVVSLWLRHLPS 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370514024 250 LEKAMLHLFEKLISSERNCLRRIECFIKDSSLPQA-ACHPAIFRVVDEMFRCALLETDGALEIIATIQVFTQCFVEALEK 328
Cdd:pfam02106 240 LEKAVLHLLESLISSEGNSLQKLECLIKDSLLPQAsACHPAIFRVVNEIFRNVLLETDGAPEVLALIQVFTQCFVQALEK 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370514024 329 ASKQLRFALKTYFPYTSPSLAMVLLQDPQDIPRGHWLQTLKHISELLREAVEDQTHGSCGGPFESWFLFIHFGGWAEMVA 408
Cdd:pfam02106 320 ENKQLRFPLKAYFPYSPPSLVMPLLTDPSEVPQGAWLQHLKWISELLRELVEDEETRSCGNPFEAWFLLVHFGEWVDIAA 399
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370514024 409 EQLLMSAAEPPTALLWLLAFYYGPRDGRQQRAQTMVQVKAVLGHLLAMSRSSSLSAQDLQTVAGQGTDTDLRAP-AQQLI 487
Cdd:pfam02106 400 ELLVTSETEDPEALLWLLAFYYHPTNRGQQRAQTMVEAKEVWDHLRMLFRSHPLSAKDLQAVAGLLSPQDPRQSlTQQLI 479
                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1370514024 488 RHLLLNFLLWAPGGHTIAWDVITLMAHTAEITHEIIGFLDQTLYRWNRLGIESPRSEKLARELLKELR 555
Cdd:pfam02106 480 RHLLLNFLLFSPGGHSIAAEVIQKVAHTSGIRDEAIGLLDSTLYRLNRLGSEAPRVHKLARELLQELQ 547
 
Name Accession Description Interval E-value
Fanconi_C pfam02106
Fanconi anaemia group C protein;
10-555 0e+00

Fanconi anaemia group C protein;


Pssm-ID: 426603  Cd Length: 547  Bit Score: 941.38  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370514024  10 CDYQFWMQKLSVWDQASTLETQQDTCLHVAQFQEFLRKMYEALKEMDSNTVIERFPTIGQLLAKACWNPFILAYDESQKI 89
Cdd:pfam02106   1 LNFQFWLDKAVAWGQATTLETQQDTCLHLPQLQEFLQQLYEALKSMNSTTAMKRFPLIGQLLGRLCWNPFVTAYDESQKL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370514024  90 LIWCLCCLINKEPQNSGQSKLNSWIQGVLSHILSALRfDKEVALFTQGLGYAPIDYYPGLLKNMVLSLASELRENHLNGF 169
Cdd:pfam02106  81 LLWCLCCLYSKEPQNAVERKANSWIRNLLCHLLSEEE-DSEVSAFIKHLGYTPKDYYPGLLKNMVLSLVEELRENCLNGF 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370514024 170 NTQRRMAPERVASLSRVCVPLITLTDVDPLVEALLICHGREPQEILQPEFFEAVNEAILLKKISLPMSAVVCLWLRHLPS 249
Cdd:pfam02106 160 NTQRRCSPERIRALSEACVPLVTLPDAAPLIEALLTYHGSCPQEVLSEEFLEAVNEAFLRKKISLPESAVVSLWLRHLPS 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370514024 250 LEKAMLHLFEKLISSERNCLRRIECFIKDSSLPQA-ACHPAIFRVVDEMFRCALLETDGALEIIATIQVFTQCFVEALEK 328
Cdd:pfam02106 240 LEKAVLHLLESLISSEGNSLQKLECLIKDSLLPQAsACHPAIFRVVNEIFRNVLLETDGAPEVLALIQVFTQCFVQALEK 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370514024 329 ASKQLRFALKTYFPYTSPSLAMVLLQDPQDIPRGHWLQTLKHISELLREAVEDQTHGSCGGPFESWFLFIHFGGWAEMVA 408
Cdd:pfam02106 320 ENKQLRFPLKAYFPYSPPSLVMPLLTDPSEVPQGAWLQHLKWISELLRELVEDEETRSCGNPFEAWFLLVHFGEWVDIAA 399
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370514024 409 EQLLMSAAEPPTALLWLLAFYYGPRDGRQQRAQTMVQVKAVLGHLLAMSRSSSLSAQDLQTVAGQGTDTDLRAP-AQQLI 487
Cdd:pfam02106 400 ELLVTSETEDPEALLWLLAFYYHPTNRGQQRAQTMVEAKEVWDHLRMLFRSHPLSAKDLQAVAGLLSPQDPRQSlTQQLI 479
                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1370514024 488 RHLLLNFLLWAPGGHTIAWDVITLMAHTAEITHEIIGFLDQTLYRWNRLGIESPRSEKLARELLKELR 555
Cdd:pfam02106 480 RHLLLNFLLFSPGGHSIAAEVIQKVAHTSGIRDEAIGLLDSTLYRLNRLGSEAPRVHKLARELLQELQ 547
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.20
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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