nuclear pore complex-interacting protein family member A2 isoform X1 [Homo sapiens]
Protein Classification
List of domain hits
| Name | Accession | Description | Interval | E-value | |||||
| NPIP super family | cl05750 | Nuclear pore complex interacting protein (NPIP); This family consists of a series of primate ... |
70-336 | 3.81e-150 | |||||
Nuclear pore complex interacting protein (NPIP); This family consists of a series of primate specific nuclear pore complex interacting protein (NPIP) sequences. The function of this family is unknown but is well conserved from African apes to humans. The actual alignment was detected with superfamily member pfam06409: Pssm-ID: 461900 [Multi-domain] Cd Length: 267 Bit Score: 425.31 E-value: 3.81e-150
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| AFD_class_I super family | cl17068 | Adenylate forming domain, Class I superfamily; This family includes acyl- and aryl-CoA ligases, ... |
2-41 | 8.30e-12 | |||||
Adenylate forming domain, Class I superfamily; This family includes acyl- and aryl-CoA ligases, as well as the adenylation domain of nonribosomal peptide synthetases and firefly luciferases. The adenylate-forming enzymes catalyze an ATP-dependent two-step reaction to first activate a carboxylate substrate as an adenylate and then transfer the carboxylate to the pantetheine group of either coenzyme A or an acyl-carrier protein. The active site of the domain is located at the interface of a large N-terminal subdomain and a smaller C-terminal subdomain. The actual alignment was detected with superfamily member cd05928: Pssm-ID: 473059 [Multi-domain] Cd Length: 530 Bit Score: 66.72 E-value: 8.30e-12
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| Name | Accession | Description | Interval | E-value | |||||
| NPIP | pfam06409 | Nuclear pore complex interacting protein (NPIP); This family consists of a series of primate ... |
70-336 | 3.81e-150 | |||||
Nuclear pore complex interacting protein (NPIP); This family consists of a series of primate specific nuclear pore complex interacting protein (NPIP) sequences. The function of this family is unknown but is well conserved from African apes to humans. Pssm-ID: 461900 [Multi-domain] Cd Length: 267 Bit Score: 425.31 E-value: 3.81e-150
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| MACS_euk | cd05928 | Eukaryotic Medium-chain acyl-CoA synthetase (MACS or ACSM); MACS catalyzes the two-step ... |
2-41 | 8.30e-12 | |||||
Eukaryotic Medium-chain acyl-CoA synthetase (MACS or ACSM); MACS catalyzes the two-step activation of medium chain fatty acids (containing 4-12 carbons). The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. The acyl-CoA is a key intermediate in many important biosynthetic and catabolic processes. MACS enzymes are localized to mitochondria. Two murine MACS family proteins are found in liver and kidney. In rodents, a MACS member is detected particularly in the olfactory epithelium and is called O-MACS. O-MACS demonstrates substrate preference for the fatty acid lengths of C6-C12. Pssm-ID: 341251 [Multi-domain] Cd Length: 530 Bit Score: 66.72 E-value: 8.30e-12
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| Name | Accession | Description | Interval | E-value | |||||
| NPIP | pfam06409 | Nuclear pore complex interacting protein (NPIP); This family consists of a series of primate ... |
70-336 | 3.81e-150 | |||||
Nuclear pore complex interacting protein (NPIP); This family consists of a series of primate specific nuclear pore complex interacting protein (NPIP) sequences. The function of this family is unknown but is well conserved from African apes to humans. Pssm-ID: 461900 [Multi-domain] Cd Length: 267 Bit Score: 425.31 E-value: 3.81e-150
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| MACS_euk | cd05928 | Eukaryotic Medium-chain acyl-CoA synthetase (MACS or ACSM); MACS catalyzes the two-step ... |
2-41 | 8.30e-12 | |||||
Eukaryotic Medium-chain acyl-CoA synthetase (MACS or ACSM); MACS catalyzes the two-step activation of medium chain fatty acids (containing 4-12 carbons). The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. The acyl-CoA is a key intermediate in many important biosynthetic and catabolic processes. MACS enzymes are localized to mitochondria. Two murine MACS family proteins are found in liver and kidney. In rodents, a MACS member is detected particularly in the olfactory epithelium and is called O-MACS. O-MACS demonstrates substrate preference for the fatty acid lengths of C6-C12. Pssm-ID: 341251 [Multi-domain] Cd Length: 530 Bit Score: 66.72 E-value: 8.30e-12
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| MACS_like | cd05972 | Medium-chain acyl-CoA synthetase (MACS or ACSM); MACS catalyzes the two-step activation of ... |
1-54 | 2.28e-03 | |||||
Medium-chain acyl-CoA synthetase (MACS or ACSM); MACS catalyzes the two-step activation of medium chain fatty acids (containing 4-12 carbons). The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. The acyl-CoA is a key intermediate in many important biosynthetic and catabolic processes. Pssm-ID: 341276 [Multi-domain] Cd Length: 428 Bit Score: 40.01 E-value: 2.28e-03
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| Blast search parameters | ||||
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