PEX5-related protein isoform X1 [Homo sapiens]
tetratricopeptide repeat protein( domain architecture ID 1000094)
tetratricopeptide repeat (TPR) protein may adopt a right-handed helical structure with an amphipathic channel and may function as an interaction scaffold in the formation of multi-protein complexes
List of domain hits
Name | Accession | Description | Interval | E-value | ||||
PEP_TPR_lipo super family | cl37187 | putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
408-638 | 3.09e-11 | ||||
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator. The actual alignment was detected with superfamily member TIGR02917: Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 66.65 E-value: 3.09e-11
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Name | Accession | Description | Interval | E-value | |||||
PEP_TPR_lipo | TIGR02917 | putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
408-638 | 3.09e-11 | |||||
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator. Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 66.65 E-value: 3.09e-11
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TPR | COG0457 | Tetratricopeptide (TPR) repeat [General function prediction only]; |
343-616 | 3.30e-10 | |||||
Tetratricopeptide (TPR) repeat [General function prediction only]; Pssm-ID: 223533 [Multi-domain] Cd Length: 291 Bit Score: 61.79 E-value: 3.30e-10
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TPR_12 | pfam13424 | Tetratricopeptide repeat; |
586-651 | 2.79e-05 | |||||
Tetratricopeptide repeat; Pssm-ID: 315987 [Multi-domain] Cd Length: 77 Bit Score: 42.76 E-value: 2.79e-05
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PRK11189 | PRK11189 | lipoprotein NlpI; Provisional |
557-606 | 1.36e-03 | |||||
lipoprotein NlpI; Provisional Pssm-ID: 236875 [Multi-domain] Cd Length: 296 Bit Score: 41.41 E-value: 1.36e-03
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TPR | smart00028 | Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum ... |
437-470 | 7.44e-03 | |||||
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum of 34 amino acids each and self-associate via a "knobs and holes" mechanism. Pssm-ID: 197478 [Multi-domain] Cd Length: 34 Bit Score: 34.34 E-value: 7.44e-03
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Name | Accession | Description | Interval | E-value | |||||
PEP_TPR_lipo | TIGR02917 | putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
408-638 | 3.09e-11 | |||||
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator. Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 66.65 E-value: 3.09e-11
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TPR | COG0457 | Tetratricopeptide (TPR) repeat [General function prediction only]; |
343-616 | 3.30e-10 | |||||
Tetratricopeptide (TPR) repeat [General function prediction only]; Pssm-ID: 223533 [Multi-domain] Cd Length: 291 Bit Score: 61.79 E-value: 3.30e-10
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PEP_TPR_lipo | TIGR02917 | putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
405-625 | 3.31e-10 | |||||
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator. Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 63.56 E-value: 3.31e-10
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PEP_TPR_lipo | TIGR02917 | putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
414-651 | 2.39e-09 | |||||
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator. Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 60.87 E-value: 2.39e-09
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PEP_TPR_lipo | TIGR02917 | putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
410-648 | 1.30e-08 | |||||
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator. Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 58.17 E-value: 1.30e-08
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TadD | COG5010 | Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
517-651 | 3.34e-08 | |||||
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures]; Pssm-ID: 227343 [Multi-domain] Cd Length: 257 Bit Score: 55.13 E-value: 3.34e-08
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TPR | COG0457 | Tetratricopeptide (TPR) repeat [General function prediction only]; |
385-651 | 1.20e-07 | |||||
Tetratricopeptide (TPR) repeat [General function prediction only]; Pssm-ID: 223533 [Multi-domain] Cd Length: 291 Bit Score: 54.08 E-value: 1.20e-07
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PEP_TPR_lipo | TIGR02917 | putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
432-616 | 2.52e-06 | |||||
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator. Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 50.85 E-value: 2.52e-06
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YfgC | COG4783 | Putative Zn-dependent protease, contains TPR repeats [General function prediction only]; |
503-654 | 7.87e-06 | |||||
Putative Zn-dependent protease, contains TPR repeats [General function prediction only]; Pssm-ID: 227122 [Multi-domain] Cd Length: 484 Bit Score: 48.94 E-value: 7.87e-06
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TPR | COG0457 | Tetratricopeptide (TPR) repeat [General function prediction only]; |
531-652 | 8.55e-06 | |||||
Tetratricopeptide (TPR) repeat [General function prediction only]; Pssm-ID: 223533 [Multi-domain] Cd Length: 291 Bit Score: 48.30 E-value: 8.55e-06
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TPR_12 | pfam13424 | Tetratricopeptide repeat; |
586-651 | 2.79e-05 | |||||
Tetratricopeptide repeat; Pssm-ID: 315987 [Multi-domain] Cd Length: 77 Bit Score: 42.76 E-value: 2.79e-05
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PEP_TPR_lipo | TIGR02917 | putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
432-604 | 6.04e-05 | |||||
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator. Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 46.23 E-value: 6.04e-05
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3a0801s09 | TIGR00990 | mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) ... |
557-659 | 1.75e-04 | |||||
mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70); [Transport and binding proteins, Amino acids, peptides and amines] Pssm-ID: 273380 [Multi-domain] Cd Length: 615 Bit Score: 44.59 E-value: 1.75e-04
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NrfG | COG4235 | Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
423-502 | 2.26e-04 | |||||
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones]; Pssm-ID: 226687 [Multi-domain] Cd Length: 287 Bit Score: 43.52 E-value: 2.26e-04
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TPR_1 | pfam00515 | Tetratricopeptide repeat; |
588-618 | 6.40e-04 | |||||
Tetratricopeptide repeat; Pssm-ID: 425728 [Multi-domain] Cd Length: 34 Bit Score: 37.40 E-value: 6.40e-04
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TadD | COG5010 | Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
426-490 | 6.84e-04 | |||||
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures]; Pssm-ID: 227343 [Multi-domain] Cd Length: 257 Bit Score: 42.04 E-value: 6.84e-04
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PRK11189 | PRK11189 | lipoprotein NlpI; Provisional |
557-606 | 1.36e-03 | |||||
lipoprotein NlpI; Provisional Pssm-ID: 236875 [Multi-domain] Cd Length: 296 Bit Score: 41.41 E-value: 1.36e-03
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TPR_16 | pfam13432 | Tetratricopeptide repeat; This family is found predominantly at the C-terminus of ... |
565-617 | 2.09e-03 | |||||
Tetratricopeptide repeat; This family is found predominantly at the C-terminus of transglutaminase enzyme core regions. Pssm-ID: 433202 [Multi-domain] Cd Length: 68 Bit Score: 36.93 E-value: 2.09e-03
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TPR_1 | pfam00515 | Tetratricopeptide repeat; |
437-470 | 3.44e-03 | |||||
Tetratricopeptide repeat; Pssm-ID: 425728 [Multi-domain] Cd Length: 34 Bit Score: 35.48 E-value: 3.44e-03
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TPR_12 | pfam13424 | Tetratricopeptide repeat; |
553-614 | 5.05e-03 | |||||
Tetratricopeptide repeat; Pssm-ID: 315987 [Multi-domain] Cd Length: 77 Bit Score: 36.21 E-value: 5.05e-03
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TPR | smart00028 | Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum ... |
437-470 | 7.44e-03 | |||||
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum of 34 amino acids each and self-associate via a "knobs and holes" mechanism. Pssm-ID: 197478 [Multi-domain] Cd Length: 34 Bit Score: 34.34 E-value: 7.44e-03
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TPR | smart00028 | Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum ... |
588-618 | 7.82e-03 | |||||
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum of 34 amino acids each and self-associate via a "knobs and holes" mechanism. Pssm-ID: 197478 [Multi-domain] Cd Length: 34 Bit Score: 34.34 E-value: 7.82e-03
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TPR | COG0457 | Tetratricopeptide (TPR) repeat [General function prediction only]; |
424-507 | 8.57e-03 | |||||
Tetratricopeptide (TPR) repeat [General function prediction only]; Pssm-ID: 223533 [Multi-domain] Cd Length: 291 Bit Score: 38.67 E-value: 8.57e-03
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Blast search parameters | ||||
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