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Conserved domains on  [gi|1720357328|ref|XP_030099054|]
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DBF4-type zinc finger-containing protein 2 homolog isoform X2 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
LELP1 super family cl25930
Late cornified envelope-like proline-rich protein 1; This family of uncharacterized proteins ...
 2276-2330 6.70e-05

Late cornified envelope-like proline-rich protein 1; This family of uncharacterized proteins is found in mammals.


The actual alignment was detected with superfamily member pfam15042:

Pssm-ID: 464464 [Multi-domain]  Cd Length: 106  Bit Score: 44.27  E-value: 6.70e-05
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 1720357328 2276 CTPraPCPPraLCTPraPCPPralctpraPCPPRALRAPCPPRalCSPraPCPPR 2330
Cdd:pfam15042   70 TSP--LCPP--LCSP--RCPP--------SCPQKGCVKPCPPK--CPS--PCLPR 106
 
Name Accession Description Interval E-value
LELP1 pfam15042
Late cornified envelope-like proline-rich protein 1; This family of uncharacterized proteins ...
 2276-2330 6.70e-05

Late cornified envelope-like proline-rich protein 1; This family of uncharacterized proteins is found in mammals.


Pssm-ID: 464464 [Multi-domain]  Cd Length: 106  Bit Score: 44.27  E-value: 6.70e-05
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 1720357328 2276 CTPraPCPPraLCTPraPCPPralctpraPCPPRALRAPCPPRalCSPraPCPPR 2330
Cdd:pfam15042   70 TSP--LCPP--LCSP--RCPP--------SCPQKGCVKPCPPK--CPS--PCLPR 106
PTZ00449 PTZ00449
104 kDa microneme/rhoptry antigen; Provisional
 2278-2330 1.63e-03

104 kDa microneme/rhoptry antigen; Provisional


Pssm-ID: 185628 [Multi-domain]  Cd Length: 943  Bit Score: 43.91  E-value: 1.63e-03
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|...
gi 1720357328 2278 PRAPCPPRALCTPRAPCPPRALCTPRAPCPPRALRAPCPPRalcSPRAPCPPR 2330
Cdd:PTZ00449   621 PKSPKRPESPKSPKRPPPPQRPSSPERPEGPKIIKSPKPPK---SPKPPFDPK 670
 
Name Accession Description Interval E-value
LELP1 pfam15042
Late cornified envelope-like proline-rich protein 1; This family of uncharacterized proteins ...
 2276-2330 6.70e-05

Late cornified envelope-like proline-rich protein 1; This family of uncharacterized proteins is found in mammals.


Pssm-ID: 464464 [Multi-domain]  Cd Length: 106  Bit Score: 44.27  E-value: 6.70e-05
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 1720357328 2276 CTPraPCPPraLCTPraPCPPralctpraPCPPRALRAPCPPRalCSPraPCPPR 2330
Cdd:pfam15042   70 TSP--LCPP--LCSP--RCPP--------SCPQKGCVKPCPPK--CPS--PCLPR 106
PTZ00449 PTZ00449
104 kDa microneme/rhoptry antigen; Provisional
 2278-2330 1.63e-03

104 kDa microneme/rhoptry antigen; Provisional


Pssm-ID: 185628 [Multi-domain]  Cd Length: 943  Bit Score: 43.91  E-value: 1.63e-03
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|...
gi 1720357328 2278 PRAPCPPRALCTPRAPCPPRALCTPRAPCPPRALRAPCPPRalcSPRAPCPPR 2330
Cdd:PTZ00449   621 PKSPKRPESPKSPKRPPPPQRPSSPERPEGPKIIKSPKPPK---SPKPPFDPK 670
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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