|
Name |
Accession |
Description |
Interval |
E-value |
| CAP_GLY |
pfam01302 |
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of ... |
213-277 |
1.08e-34 |
|
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of microtubules and transportation of vesicles and organelles along the cytoskeletal network. A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 460154 [Multi-domain] Cd Length: 65 Bit Score: 126.75 E-value: 1.08e-34
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1720414379 213 VGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKV 277
Cdd:pfam01302 1 VGDRVEVPGGRRGTVRYVGPVPFAPGVWVGVELDEPVGKNDGSVKGVRYFECPPKHGVFVRPSKV 65
|
|
| CAP_GLY |
pfam01302 |
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of ... |
60-124 |
5.32e-31 |
|
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of microtubules and transportation of vesicles and organelles along the cytoskeletal network. A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 460154 [Multi-domain] Cd Length: 65 Bit Score: 116.35 E-value: 5.32e-31
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1720414379 60 VGERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPLKGIFTRPSKL 124
Cdd:pfam01302 1 VGDRVEVPGGRRGTVRYVGPVPFAPGVWVGVELDEPVGKNDGSVKGVRYFECPPKHGVFVRPSKV 65
|
|
| CAP_GLY |
smart01052 |
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and ... |
213-278 |
3.30e-28 |
|
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network; A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 214997 [Multi-domain] Cd Length: 68 Bit Score: 108.44 E-value: 3.30e-28
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1720414379 213 VGDRVLVGGT-KAGVVRFLGETDFAKGEWCGVELDEPL-GKNDGAVAGTRYFQCQPKYGLFAPVHKVT 278
Cdd:smart01052 1 VGDRVEVGGGgRRGTVRYVGPTPFAPGVWVGVELDEPLrGKNDGSVKGVRYFECPPKHGIFVRPSKVE 68
|
|
| CAP_GLY |
smart01052 |
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and ... |
60-125 |
2.24e-27 |
|
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network; A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 214997 [Multi-domain] Cd Length: 68 Bit Score: 106.13 E-value: 2.24e-27
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1720414379 60 VGERVWVNGN-KPGFIQFLGETQFAPGQWAGIVLDEP-IGKNDGSVAGVRYFQCEPLKGIFTRPSKLT 125
Cdd:smart01052 1 VGDRVEVGGGgRRGTVRYVGPTPFAPGVWVGVELDEPlRGKNDGSVKGVRYFECPPKHGIFVRPSKVE 68
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
588-1302 |
9.33e-22 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 102.84 E-value: 9.33e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 588 QQAMEELKVsFSKGIGTDSAEFAELKTQIERLRLDYQHEIE--SLQS-KQDSERSAHAKEMETMQAKLMKIIKEKeDSLE 664
Cdd:TIGR02169 173 EKALEELEE-VEENIERLDLIIDEKRQQLERLRREREKAERyqALLKeKREYEGYELLKEKEALERQKEAIERQL-ASLE 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 665 AVKARLDSAEDQHLVEMEDTLNKLQEAEIKVKELevlqakyTEQSEVignftsqlsAVKEKLLDLDALRkANSEGKLELe 744
Cdd:TIGR02169 251 EELEKLTEEISELEKRLEEIEQLLEELNKKIKDL-------GEEEQL---------RVKEKIGELEAEI-ASLERSIAE- 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 745 tLRQQLEGAEKQIKNLETERNAESSKANSITKELQEKELVLTGLQDSLNQVNQVKETLEKELQTLKEKFASTSEEAVSAQ 824
Cdd:TIGR02169 313 -KERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYR 391
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 825 TRMQDTVNKLH-------QKEEQFNVLSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLENDIAEIMKMSGDNSSQL 897
Cdd:TIGR02169 392 EKLEKLKREINelkreldRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQEL 471
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 898 TKMNDELRLKERSVEELQLKLTKANENAS--------------FLQKSIGEVTLKAEQSQQQAARKHEEEKKELEEKLLE 963
Cdd:TIGR02169 472 YDLKEEYDRVEKELSKLQRELAEAEAQARaseervrggraveeVLKASIQGVHGTVAQLGSVGERYATAIEVAAGNRLNN 551
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 964 LEKKMETSYNQCQDLkAKYEKASSET-----KTKHEEILQNLQKM---------LADTEDKLKAA-------------QE 1016
Cdd:TIGR02169 552 VVVEDDAVAKEAIEL-LKRRKAGRATflplnKMRDERRDLSILSEdgvigfavdLVEFDPKYEPAfkyvfgdtlvvedIE 630
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1017 ANRDLM-------------------------QDMEELKTQADKAKAAQTAED----------AMQIMEQMTKEKTETLAS 1061
Cdd:TIGR02169 631 AARRLMgkyrmvtlegelfeksgamtggsraPRGGILFSRSEPAELQRLRERleglkrelssLQSELRRIENRLDELSQE 710
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1062 LEDTKQTNARLQNELDTLKENNLKTVEELNKSKELLSVENQKMEEFKKEIETLKQAAAQKSQQLSALQEENVKLAEELGR 1141
Cdd:TIGR02169 711 LSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSH 790
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1142 TR-DEVTSH-QKLEEERSVLNNQLLEMKKSLPSNTLRES----------EFRKDADEEKASLQKSISLTSALLTEKDAEL 1209
Cdd:TIGR02169 791 SRiPEIQAElSKLEEEVSRIEARLREIEQKLNRLTLEKEylekeiqelqEQRIDLKEQIKSIEKEIENLNGKKEELEEEL 870
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1210 EKLRNEVTVLRGENATAKS----LHSVVQTLESDKVKLELKVKNLELQLKENKRQLSSSSGNTDAQAEEDERAQESQQMI 1285
Cdd:TIGR02169 871 EELEAALRDLESRLGDLKKerdeLEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEE 950
|
810
....*....|....*..
gi 1720414379 1286 DFLNSVIVDLQRKNQDL 1302
Cdd:TIGR02169 951 LSLEDVQAELQRVEEEI 967
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
606-1286 |
9.25e-20 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 96.28 E-value: 9.25e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 606 SAEFAELKTQIERLRLdYQHEIESLQSKQDSERSAHAKEMETMQAKLMkIIKEKEDSLEAVKARLDSAEDQHLVEMEDTL 685
Cdd:TIGR02168 259 TAELQELEEKLEELRL-EVSELEEEIEELQKELYALANEISRLEQQKQ-ILRERLANLERQLEELEAQLEELESKLDELA 336
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 686 NKLQEAEikvKELEVLQAKYTEQSEVIGNFTSQLSAVKEKLLDLDA----LRKANSEGKLELETLRQQLEGAEKQIKNLE 761
Cdd:TIGR02168 337 EELAELE---EKLEELKEELESLEAELEELEAELEELESRLEELEEqletLRSKVAQLELQIASLNNEIERLEARLERLE 413
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 762 TERNAESSKANSITKELQEKELVLtgLQDSLNQVNQVKETLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQKEEQF 841
Cdd:TIGR02168 414 DRRERLQQEIEELLKKLEEAELKE--LQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARL 491
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 842 NVLSSELEKLRENLTDMEAKFKEKDDRED------QLVKAKEK----LENDIAEIMKMSGDNSSQLTKMNDELRLKERSV 911
Cdd:TIGR02168 492 DSLERLQENLEGFSEGVKALLKNQSGLSGilgvlsELISVDEGyeaaIEAALGGRLQAVVVENLNAAKKAIAFLKQNELG 571
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 912 EELQLKLTKANENAsfLQKSIGEVtLKAEQSQQQAARKHEEEKKELEEKLLE--LEKKMETSYNQCQDLKAKYE------ 983
Cdd:TIGR02168 572 RVTFLPLDSIKGTE--IQGNDREI-LKNIEGFLGVAKDLVKFDPKLRKALSYllGGVLVVDDLDNALELAKKLRpgyriv 648
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 984 --------------KASSETKTKheeiLQNLQKMLADTEDKLKAAQEANRDLMQDMEELKTQADKAKaaQTAEDAMQIME 1049
Cdd:TIGR02168 649 tldgdlvrpggvitGGSAKTNSS----ILERRREIEELEEKIEELEEKIAELEKALAELRKELEELE--EELEQLRKELE 722
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1050 QMTKEKTETLASLEDTKQTNARLQNELDTLKENNLKTVEELNKSKELLSVENQKMEEFKKEIETLKQAAAQKSQQLSALQ 1129
Cdd:TIGR02168 723 ELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALR 802
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1130 EENVKLAEELGRTRDEVtshQKLEEERSVLNNQLLEMKKSLPsntlRESEFRKDADEEKASLQKSISLTSALLTEKDAEL 1209
Cdd:TIGR02168 803 EALDELRAELTLLNEEA---ANLRERLESLERRIAATERRLE----DLEEQIEELSEDIESLAAEIEELEELIEELESEL 875
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1720414379 1210 EKLRNEVTVLRGEnatakslhsvVQTLESDKVKLELKVKNLELQLKENKRQLSSSsgnTDAQAEEDERAQESQQMID 1286
Cdd:TIGR02168 876 EALLNERASLEEA----------LALLRSELEELSEELRELESKRSELRRELEEL---REKLAQLELRLEGLEVRID 939
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
351-1117 |
1.09e-18 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 92.81 E-value: 1.09e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 351 ALQEALKEKQ-----QHIEQLLAERDLERAEVAKATSHVGEIEQELALArdghDQHVLELEAKMDQLRTMVEAADREKVE 425
Cdd:TIGR02168 217 ELKAELRELElallvLRLEELREELEELQEELKEAEEELEELTAELQEL----EEKLEELRLEVSELEEEIEELQKELYA 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 426 LLNQLEEEKRKVEDLQFRVEEESITKGDLEVATVSEKSRIMELEKDLALRAQEVAELRRRLESSKppGDVDMSLSLLQEI 505
Cdd:TIGR02168 293 LANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLE--AELEELEAELEEL 370
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 506 SALQEKLEAIHTDHQGEMTSLKEHFG---AREEAFQKEIKALHTATEKLSKENESLRSKLDHANKEnsdvialwksKLET 582
Cdd:TIGR02168 371 ESRLEELEEQLETLRSKVAQLELQIAslnNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELK----------ELQA 440
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 583 AIASHQQAMEELKVSFSKGIgTDSAEFAELKTQIERLRLDYQHEIESLQSKQDSERS----------------AHAKEME 646
Cdd:TIGR02168 441 ELEELEEELEELQEELERLE-EALEELREELEEAEQALDAAERELAQLQARLDSLERlqenlegfsegvkallKNQSGLS 519
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 647 TMQAKLMKIIKEKEDSLEAVKARLDSAEDQHLVEMEDT--------------------LNKLQEAEIKVKELEVLQA--- 703
Cdd:TIGR02168 520 GILGVLSELISVDEGYEAAIEAALGGRLQAVVVENLNAakkaiaflkqnelgrvtflpLDSIKGTEIQGNDREILKNieg 599
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 704 ---------KYTEQSEVIGNFTSQLSAVKEKLLDLDALRKANSEG----KLELETLR-------------QQLEGAEKQI 757
Cdd:TIGR02168 600 flgvakdlvKFDPKLRKALSYLLGGVLVVDDLDNALELAKKLRPGyrivTLDGDLVRpggvitggsaktnSSILERRREI 679
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 758 KNLETERNAESSKANSITKELQEKELVLTGLQDSLNQVNQVKETLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQK 837
Cdd:TIGR02168 680 EELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTEL 759
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 838 EEQFNVLSSELEKLRENLTDMEAKfkekddredqlvkaKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERSVEELQLK 917
Cdd:TIGR02168 760 EAEIEELEERLEEAEEELAEAEAE--------------IEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRER 825
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 918 LTKANENASFLQKSIGEVTLKAEQSQQQAARkheeeKKELEEKLLELEKKMETSYNQCQDLKAKYEKASSEtktkHEEIL 997
Cdd:TIGR02168 826 LESLERRIAATERRLEDLEEQIEELSEDIES-----LAAEIEELEELIEELESELEALLNERASLEEALAL----LRSEL 896
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 998 QNLQKMLADTEDKLKAAQEANRDLMQDMEELKTQADKAKA------AQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAR 1071
Cdd:TIGR02168 897 EELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVridnlqERLSEEYSLTLEEAEALENKIEDDEEEARRRLKR 976
|
810 820 830 840
....*....|....*....|....*....|....*....|....*.
gi 1720414379 1072 LQNELDTLKENNLKTVEELNKSKELLSVENQKMEEFKKEIETLKQA 1117
Cdd:TIGR02168 977 LENKIKELGPVNLAAIEEYEELKERYDFLTAQKEDLTEAKETLEEA 1022
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
401-1195 |
2.72e-16 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 85.11 E-value: 2.72e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 401 HVLELEAKMDQLRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLEVATVSEKSRIMELEKDLALRAQEVA 480
Cdd:TIGR02168 233 RLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLA 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 481 ELRRRLESSKppGDVDMSLSLLQEISALQEKLEAIHTDHQGEMTSLKEhfgaREEAFQKEIKALHTATEKLSKENESLRS 560
Cdd:TIGR02168 313 NLERQLEELE--AQLEELESKLDELAEELAELEEKLEELKEELESLEA----ELEELEAELEELESRLEELEEQLETLRS 386
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 561 KLDHANKEnsdvialwksklETAIASHQQAMEELKvsfskgigtdsaefaelkTQIERLRLDYQHEIESLQSK-QDSERS 639
Cdd:TIGR02168 387 KVAQLELQ------------IASLNNEIERLEARL------------------ERLEDRRERLQQEIEELLKKlEEAELK 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 640 AHAKEMETMQAKLMKIIKEKEDsLEAVKARLDSAEDQHLVEMEDTLNKLQEAEIKVKELEVLQAKYTEQSEVIGNFTSQL 719
Cdd:TIGR02168 437 ELQAELEELEEELEELQEELER-LEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQ 515
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 720 SAVKEKLLDLDALRKANSEGKLELETL----RQQL--EGAEKQIKNLETERNAESSKANSitkelqekeLVLTGLQDSLN 793
Cdd:TIGR02168 516 SGLSGILGVLSELISVDEGYEAAIEAAlggrLQAVvvENLNAAKKAIAFLKQNELGRVTF---------LPLDSIKGTEI 586
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 794 QVN--QVKETLEKELQTLKE--KFASTSEEAVS---AQTRMQDTV----NKLHQKEEQFNVLSSELEKLR--------EN 854
Cdd:TIGR02168 587 QGNdrEILKNIEGFLGVAKDlvKFDPKLRKALSyllGGVLVVDDLdnalELAKKLRPGYRIVTLDGDLVRpggvitggSA 666
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 855 LTDMEAKFKEKDDREdqLVKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERSVEELQLKLTKANENASFLQKSIGE 934
Cdd:TIGR02168 667 KTNSSILERRREIEE--LEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQ 744
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 935 VTLKAEQSQQQAARKHEEEKKELEEKLLELEKKMETSYNQcQDLKAKYEKASSETKTKhEEILQNLQKMLADTEDKLKAA 1014
Cdd:TIGR02168 745 LEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEI-EELEAQIEQLKEELKAL-REALDELRAELTLLNEEAANL 822
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1015 QEANRDLMQDMEELKTQAdkakaaqtaEDAMQIMEQMTKEKTETLASLEDTKQTNARLQNELDTLKennlktvEELNKSK 1094
Cdd:TIGR02168 823 RERLESLERRIAATERRL---------EDLEEQIEELSEDIESLAAEIEELEELIEELESELEALL-------NERASLE 886
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1095 ELLSVENQKMEEFKKEIETLKQAAAQKSQQLSALQEENVKLAEELGRTRDEVtshQKLEEERSVLNNQLLEMKKSLPSNT 1174
Cdd:TIGR02168 887 EALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRI---DNLQERLSEEYSLTLEEAEALENKI 963
|
810 820
....*....|....*....|.
gi 1720414379 1175 LRESEfrkDADEEKASLQKSI 1195
Cdd:TIGR02168 964 EDDEE---EARRRLKRLENKI 981
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
344-1169 |
7.10e-16 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 83.58 E-value: 7.10e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 344 RKISGTTALQEALKEKQQH---IEQLLAERDLERAEVAKATSHVGEIEQELALARDGHDQHVLELEAK----MDQLRTMV 416
Cdd:TIGR02169 217 LKEKREYEGYELLKEKEALerqKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLgeeeQLRVKEKI 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 417 EAADREKVELLNQLEEEKRKVEDLqfrveEESITKGDLEVATVseKSRIMELEKDLALRAQEVAELRRRLESSKppgdvd 496
Cdd:TIGR02169 297 GELEAEIASLERSIAEKERELEDA-----EERLAKLEAEIDKL--LAEIEELEREIEEERKRRDKLTEEYAELK------ 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 497 mslsllQEISALQEKLEAIHTDHQgemTSLKEHFGARE--EAFQKEIKALHTATEKLSKENESLRSKLDHANKENSDV-- 572
Cdd:TIGR02169 364 ------EELEDLRAELEEVDKEFA---ETRDELKDYREklEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIea 434
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 573 -IALWKSKLETAIASHQQAMEELKvSFSKGIGTDSAEFAELKTQIERLrldyQHEIESLQSKQDsERSAHAKEMETMQAK 651
Cdd:TIGR02169 435 kINELEEEKEDKALEIKKQEWKLE-QLAADLSKYEQELYDLKEEYDRV----EKELSKLQRELA-EAEAQARASEERVRG 508
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 652 LMKIIKEKEDSLEAVK---ARLDSAEDQHLVEMEDTL-NKLQEAeikVKELEVLQAKYTE--QSEVIGNFTS-QLSAVKE 724
Cdd:TIGR02169 509 GRAVEEVLKASIQGVHgtvAQLGSVGERYATAIEVAAgNRLNNV---VVEDDAVAKEAIEllKRRKAGRATFlPLNKMRD 585
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 725 KLLDLDALRKANSEG-KLELETLRQQLEGAEKQI-------KNLETERNAESS-KANSITKELQEKELVLTG-------- 787
Cdd:TIGR02169 586 ERRDLSILSEDGVIGfAVDLVEFDPKYEPAFKYVfgdtlvvEDIEAARRLMGKyRMVTLEGELFEKSGAMTGgsraprgg 665
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 788 ------LQDSLNQVNQVKETLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAK 861
Cdd:TIGR02169 666 ilfsrsEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEED 745
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 862 FKEKDdredqlvkakEKLENDIAEimkmsgdnssqLTKMNDELRLKERSVEELQLKLT--KANENASFLQKSIGEVT-LK 938
Cdd:TIGR02169 746 LSSLE----------QEIENVKSE-----------LKELEARIEELEEDLHKLEEALNdlEARLSHSRIPEIQAELSkLE 804
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 939 AEQSQQQAARKH-EEEKKELEEKLLELEKKMETSYNQCQDLKAKyekassetKTKHEEILQNLQKMLADTEDKLKAAQEA 1017
Cdd:TIGR02169 805 EEVSRIEARLREiEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQ--------IKSIEKEIENLNGKKEELEEELEELEAA 876
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1018 NRDLMQDMEELKTQADKAKAAqtaedamqiMEQMTKEKTETLASLEDTKQTNARLQNELDTLKENnLKTVEELNKSKELL 1097
Cdd:TIGR02169 877 LRDLESRLGDLKKERDELEAQ---------LRELERKIEELEAQIEKKRKRLSELKAKLEALEEE-LSEIEDPKGEDEEI 946
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1720414379 1098 SVENQKMEEFKKEIETLKQAaaqksqqLSALQEENVK----LAEELGRTRDEVTSHQKLEEERSVLN---NQLLEMKKS 1169
Cdd:TIGR02169 947 PEEELSLEDVQAELQRVEEE-------IRALEPVNMLaiqeYEEVLKRLDELKEKRAKLEEERKAILeriEEYEKKKRE 1018
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
729-1319 |
9.01e-16 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 83.19 E-value: 9.01e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 729 LDALRKANSEGKLELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEKELVLTGLqdslnqvnqvkETLEKELQT 808
Cdd:PRK03918 167 LGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKL-----------EKEVKELEE 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 809 LKEKFASTSEEAVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEaKFKEKDDREDQLVKAKEKLENDIAEIMK 888
Cdd:PRK03918 236 LKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELK-ELKEKAEEYIKLSEFYEEYLDELREIEK 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 889 MSGDNSSQLT---KMNDELRLKERSVEELQLKLTKANENASFLQKSIGEV-TLKAEQSQQQAARKheeekkeleekllel 964
Cdd:PRK03918 315 RLSRLEEEINgieERIKELEEKEERLEELKKKLKELEKRLEELEERHELYeEAKAKKEELERLKK--------------- 379
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 965 ekkmETSYNQCQDLKAKYEKASSEtKTKHEEILQNLQKMLADTEDKLKaaqeanrDLMQDMEELKTQADKA---KAAQTA 1041
Cdd:PRK03918 380 ----RLTGLTPEKLEKELEELEKA-KEEIEEEISKITARIGELKKEIK-------ELKKAIEELKKAKGKCpvcGRELTE 447
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1042 EDAMQIMEQMT-------KEKTETLASLEDTKQTNARLQNELDTLKE--NNLKTVEELNKSKELLSVEN-QKMEEFKKEI 1111
Cdd:PRK03918 448 EHRKELLEEYTaelkrieKELKEIEEKERKLRKELRELEKVLKKESEliKLKELAEQLKELEEKLKKYNlEELEKKAEEY 527
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1112 ETLKQAAAQKSQQLSALQEENVKLAEELGRTRDEVTSHQKLEEERSVLNNQLLEMK-KSLPSNTLRESEFR--------- 1181
Cdd:PRK03918 528 EKLKEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELGfESVEELEERLKELEpfyneylel 607
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1182 KDADEEKASLQKSISLTSALLTEKDAELEKLRNEVTVLRGENATAKSLHSV--VQTLESDKVKLELKVKNLELQLKENKR 1259
Cdd:PRK03918 608 KDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEeeYEELREEYLELSRELAGLRAELEELEK 687
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1260 QLSSSSGNTDAQAEEDERAQESQQMIDFLNSVIVDLQRKNQDLKMKVEMMSEAALNGNGE 1319
Cdd:PRK03918 688 RREEIKKTLEKLKEELEEREKAKKELEKLEKALERVEELREKVKKYKALLKERALSKVGE 747
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
412-1256 |
4.86e-15 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 80.79 E-value: 4.86e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 412 LRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLEVATVsEKSRIMELEKDLALRAQEVAELRRRLESSKp 491
Cdd:pfam02463 176 KKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEE-EYLLYLDYLKLNEERIDLLQELLRDEQEEI- 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 492 pgdvdmsLSLLQEISALQEKLEAIHTDHQGEMtslkehfgaREEAFQKEIKALHTATEKLSKENESLRSKLDHANKENSD 571
Cdd:pfam02463 254 -------ESSKQEIEKEEEKLAQVLKENKEEE---------KEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLK 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 572 VIALWKSKLETAIASHQQAMEELKVSFSKGIGTDSAEFAELKTQIERLRLDYQHEIESLQSKQDSERSAHAKEMETMQAK 651
Cdd:pfam02463 318 ESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEEL 397
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 652 LMKIIKEKEDSLEAVKARldSAEDQHLVEMEDTLNKLQEAEikvKELEVLQAKYTEQSEVIgnftsQLSAVKEKLLDLDA 731
Cdd:pfam02463 398 ELKSEEEKEAQLLLELAR--QLEDLLKEEKKEELEILEEEE---ESIELKQGKLTEEKEEL-----EKQELKLLKDELEL 467
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 732 LRKANSEGKLELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEKELVLTGLqdslnqvnQVKETLEKELQTLKE 811
Cdd:pfam02463 468 KKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRI--------ISAHGRLGDLGVAVE 539
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 812 KFASTSEEAVSAQtRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLENDIAEIMKMSG 891
Cdd:pfam02463 540 NYKVAISTAVIVE-VSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADED 618
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 892 DNSSQLTKMNDELRLKERSVEELQLKLTKANENASFLQKSIGEVTLKAEQSQQQAARKheeeKKELEEKLLELEKKMETS 971
Cdd:pfam02463 619 DKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELL----EIQELQEKAESELAKEEI 694
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 972 YNQCQDLKAKYEKASSETKTKHEEILQNLQKMLADTEDK----LKAAQEANRDLMQDMEELKTQADKAKAAQTAEDAMQI 1047
Cdd:pfam02463 695 LRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKineeLKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEK 774
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1048 MEQMTKEKTETLASLEDTKQTNARLQNELDTLKENNLKTVEELNKSKELLSVENQKMEEFKKEIETLKQAAAQKSQQLSA 1127
Cdd:pfam02463 775 ELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEE 854
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1128 LQEENVKLAEELGRTRDEVTSHQKLEEERSVLNNQLLEMKKslpSNTLRESEFRKDADEEKASLQKSISLTSAlltEKDA 1207
Cdd:pfam02463 855 ELERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKE---KEEKKELEEESQKLNLLEEKENEIEERIK---EEAE 928
|
810 820 830 840
....*....|....*....|....*....|....*....|....*....
gi 1720414379 1208 ELEKLRNEVTVLRGENATAKSLhsvvqtLESDKVKLELKVKNLELQLKE 1256
Cdd:pfam02463 929 ILLKYEEEPEELLLEEADEKEK------EENNKEEEEERNKRLLLAKEE 971
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
663-1215 |
1.04e-14 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 79.60 E-value: 1.04e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 663 LEAVKARLDSAEDqHLVEMEDTLNKLQ-EAEIKVK------ELEVLQAKYteqsevignftsQLSAVKEKLLDLDALRKA 735
Cdd:COG1196 181 LEATEENLERLED-ILGELERQLEPLErQAEKAERyrelkeELKELEAEL------------LLLKLRELEAELEELEAE 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 736 NSEGKLELETLRQQLEGAEKQIKNLETERNAESSKANS-------ITKELQEKELVLTGLQDSLNQVNQVKETLEKELQT 808
Cdd:COG1196 248 LEELEAELEELEAELAELEAELEELRLELEELELELEEaqaeeyeLLAELARLEQDIARLEERRRELEERLEELEEELAE 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 809 LKEKFASTSEEAVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLENDIAEIMK 888
Cdd:COG1196 328 LEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEE 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 889 MSGDNSSQLTKMNDELRLKERSVEELQLKLTKANENASFLQKSIGEVTLKAEQ--SQQQAARKHEEEKKELEEKLLELEK 966
Cdd:COG1196 408 AEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEAllELLAELLEEAALLEAALAELLEELA 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 967 KMETSYNQCQDLKAKYEKASSETKTKHEEILQNLQ----KMLADTEDKLKAAQEA------NRDLMQDMEELKTQADKAK 1036
Cdd:COG1196 488 EAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLagavAVLIGVEAAYEAALEAalaaalQNIVVEDDEVAAAAIEYLK 567
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1037 AAQTAEDAMQIMEQMTKEKTETLASL------------EDTKQTNARLQNELDTLKENNLKT------VEELNKSKELLS 1098
Cdd:COG1196 568 AAKAGRATFLPLDKIRARAALAAALArgaigaavdlvaSDLREADARYYVLGDTLLGRTLVAarleaaLRRAVTLAGRLR 647
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1099 VENQKMEEFKKEIETLKQAAAQKSQQLSALQEENVKLAEELGRTRDEVTSHQKLEEERSVLNNQLLEMKKSLpsntLRES 1178
Cdd:COG1196 648 EVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEE----ELEE 723
|
570 580 590
....*....|....*....|....*....|....*..
gi 1720414379 1179 EFRKDADEEKASLQKSISLTSALLTEKDAELEKLRNE 1215
Cdd:COG1196 724 EALEEQLEAEREELLEELLEEEELLEEEALEELPEPP 760
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
356-1001 |
2.45e-14 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 78.62 E-value: 2.45e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 356 LKEKQQHIEQLLAERDLE----RAEVAKATSHVGEIEQELAL----ARDGHD---QHVLELEAKMDQLRTmveaadrekv 424
Cdd:pfam15921 262 LQQHQDRIEQLISEHEVEitglTEKASSARSQANSIQSQLEIiqeqARNQNSmymRQLSDLESTVSQLRS---------- 331
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 425 ellnQLEEEKRKVEDlqfrveeesitkgdlevatvseksRIMELEKDLALRAQEVAELR-RRLESSKPPGDVDmslsllq 503
Cdd:pfam15921 332 ----ELREAKRMYED------------------------KIEELEKQLVLANSELTEARtERDQFSQESGNLD------- 376
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 504 eiSALQEKLEAIHTdHQGEMTSLKEhfgareeafqkEIKALHTATEKLSKENESLRSKLDHANKENSDVIALWKskletA 583
Cdd:pfam15921 377 --DQLQKLLADLHK-REKELSLEKE-----------QNKRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLK-----A 437
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 584 IASHQQAMEELKVSFSKGIGTDSAEFAELKTQIERLRLDYQHEIESLQSKQDSERSAhakemETMQAKLMKIIKEKEDSL 663
Cdd:pfam15921 438 MKSECQGQMERQMAAIQGKNESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESS-----ERTVSDLTASLQEKERAI 512
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 664 EAVKAR---------LDSAEDQHLVEMEDTLN---------KLQEAEiKVKELEVLQAKYTEQSEVIGNFTSQLSAVkek 725
Cdd:pfam15921 513 EATNAEitklrsrvdLKLQELQHLKNEGDHLRnvqtecealKLQMAE-KDKVIEILRQQIENMTQLVGQHGRTAGAM--- 588
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 726 LLDLDALRKANSEGKLELETLR-------QQLEGAEKQIKNLETER----NAESSKANSITKELQEKELVLTGLQDSLNQ 794
Cdd:pfam15921 589 QVEKAQLEKEINDRRLELQEFKilkdkkdAKIRELEARVSDLELEKvklvNAGSERLRAVKDIKQERDQLLNEVKTSRNE 668
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 795 VNQVKEtlekELQTLKEKFASTSEEavsaqtrMQDTVNKLHQkeeQFNVLSSELEKLRENLTDMEAKfkekddredqlvk 874
Cdd:pfam15921 669 LNSLSE----DYEVLKRNFRNKSEE-------METTTNKLKM---QLKSAQSELEQTRNTLKSMEGS------------- 721
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 875 akeklendIAEIMKMSGDNSSQLTKMNDELRLKERSVEELQLKLTKANENASFLQ----KSIGEVTLKAEQSQQQAA--- 947
Cdd:pfam15921 722 --------DGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKeeknKLSQELSTVATEKNKMAGele 793
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*.
gi 1720414379 948 --RKHEEEKKELEEKLLELEKKMETSYNQCQDLKAKYEKASSETKTKHEEILQNLQ 1001
Cdd:pfam15921 794 vlRSQERRLKEKVANMEVALDKASLQFAECQDIIQRQEQESVRLKLQHTLDVKELQ 849
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
613-1319 |
1.50e-13 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 75.93 E-value: 1.50e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 613 KTQIERLRLDYQHEIESLQSKQDSERSAHAKE-------METMQAKLMKIIKEKeDSLEAVKARLDSAEDQHLVEMEDTL 685
Cdd:pfam15921 73 KEHIERVLEEYSHQVKDLQRRLNESNELHEKQkfylrqsVIDLQTKLQEMQMER-DAMADIRRRESQSQEDLRNQLQNTV 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 686 NKLQEAE-IKVKELEVLQAKYTEQSEVIGNFTSQLSAVKEKLLDLDAL--RKANSEGKLELETLRQQLEGAEKQIKNLET 762
Cdd:pfam15921 152 HELEAAKcLKEDMLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEAsgKKIYEHDSMSTMHFRSLGSAISKILRELDT 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 763 ERN-------AESSKANSITKELQEK-ELVLTGLQDslnQVNQVKETLEKELQTLKEKFASTSEEAVSAQTRMQ----DT 830
Cdd:pfam15921 232 EISylkgrifPVEDQLEALKSESQNKiELLLQQHQD---RIEQLISEHEVEITGLTEKASSARSQANSIQSQLEiiqeQA 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 831 VNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEK-DDREDQLVKAKEKLENDIAE---IMKMSGDNSSQLTKMNDEL-- 904
Cdd:pfam15921 309 RNQNSMYMRQLSDLESTVSQLRSELREAKRMYEDKiEELEKQLVLANSELTEARTErdqFSQESGNLDDQLQKLLADLhk 388
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 905 RLKERSVEELQLKLTKANENASFLqkSIGEVTLKAEQSQQQAARkheeekkeleeklleLEKKMETSYNQCQDlKAKYEK 984
Cdd:pfam15921 389 REKELSLEKEQNKRLWDRDTGNSI--TIDHLRRELDDRNMEVQR---------------LEALLKAMKSECQG-QMERQM 450
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 985 ASSETKTKHEEILQNLQKMLADTEDKL-KAAQEANRDLMQDMEELKTQADKAKAAQTAEDAMqimEQMTKEKTETLASLE 1063
Cdd:pfam15921 451 AAIQGKNESLEKVSSLTAQLESTKEMLrKVVEELTAKKMTLESSERTVSDLTASLQEKERAI---EATNAEITKLRSRVD 527
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1064 DTKQTNARLQNELDTLKenNLKTveELNKSKELLSVENQKMEEFKKEIETLKQAAAQKSQQLSALQEENVKLAEELGRTR 1143
Cdd:pfam15921 528 LKLQELQHLKNEGDHLR--NVQT--ECEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKAQLEKEINDRR 603
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1144 DEVTSHQKLEEERsvlnnqllemkkslpSNTLRESEFR-KDADEEKASLQKSISLTSALLTEKDAELEKLRNEVTVLRGE 1222
Cdd:pfam15921 604 LELQEFKILKDKK---------------DAKIRELEARvSDLELEKVKLVNAGSERLRAVKDIKQERDQLLNEVKTSRNE 668
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1223 -NATAKSLHSVVQTLESDKVKLELKVKNLELQLKENKRQLSSSSGNTDAQAEEDERAQESQQMidfLNSVIVDLQRKNQD 1301
Cdd:pfam15921 669 lNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELEQTRNTLKSMEGSDGHAMKVAMG---MQKQITAKRGQIDA 745
|
730
....*....|....*...
gi 1720414379 1302 LKMKVEMMSEAALNGNGE 1319
Cdd:pfam15921 746 LQSKIQFLEEAMTNANKE 763
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
519-1335 |
1.52e-13 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 76.33 E-value: 1.52e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 519 HQGEMTSLKEHFGAREEAFQKEIKALHTATEKLSKENESLRSKLDHANKENSDVIALWKSKLETAIASHQQAMEELKVSF 598
Cdd:PTZ00121 1065 HVGQDEGLKPSYKDFDFDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEE 1144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 599 SKGigTDSAEFAELKTQIERLRldyqhEIESLQSKQDSERSAHAKEMEtmQAKLMKIIKEKEDSLEAVKAR----LDSAE 674
Cdd:PTZ00121 1145 ARK--AEDAKRVEIARKAEDAR-----KAEEARKAEDAKKAEAARKAE--EVRKAEELRKAEDARKAEAARkaeeERKAE 1215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 675 DQHLVEMEDTLNKLQEAE-IKVKELEVLQAKYTEQSEVIGNFTSQLSA---VKEKLLDLDALRKANSEGKLELETLRQQL 750
Cdd:PTZ00121 1216 EARKAEDAKKAEAVKKAEeAKKDAEEAKKAEEERNNEEIRKFEEARMAhfaRRQAAIKAEEARKADELKKAEEKKKADEA 1295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 751 EGAEKQIKNLETERNAESS-KANSITKELQEKELVLTGLQDSLNQVNQVKETLEKELQTLKEKFASTSEEAVSAQTRMQ- 828
Cdd:PTZ00121 1296 KKAEEKKKADEAKKKAEEAkKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEe 1375
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 829 -----DTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLENDIAEIMKMSGDNSSQLTKMNDE 903
Cdd:PTZ00121 1376 akkkaDAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEE 1455
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 904 LRLKERSVE--ELQLKLTKANENASFLQKSiGEVTLKAEQSQQQA--ARKHEEEKKELEEKLLELEKKMETSYNQCQDLK 979
Cdd:PTZ00121 1456 AKKAEEAKKkaEEAKKADEAKKKAEEAKKA-DEAKKKAEEAKKKAdeAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAK 1534
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 980 AKYEKASSETKTKHEEILQnlQKMLADTEDKLKAAQEANRDLMQDMEELKTQADKAKAAQTAEDAMQIMEQMTKEKTETL 1059
Cdd:PTZ00121 1535 KADEAKKAEEKKKADELKK--AEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEA 1612
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1060 ASLEDTKQTNARLQNEldtlkENNLKTVEELNKSKEllsVENQKMEEFKKEIETLKQAAAQ----------KSQQLSALQ 1129
Cdd:PTZ00121 1613 KKAEEAKIKAEELKKA-----EEEKKKVEQLKKKEA---EEKKKAEELKKAEEENKIKAAEeakkaeedkkKAEEAKKAE 1684
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1130 EENVKLAEELGRTRDEVTSHQKLEEERSVLNNQLLEMKKSLPSNTLRESEFRKDADEEKASLQKsisltsalLTEKDAEL 1209
Cdd:PTZ00121 1685 EDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEE--------AKKDEEEK 1756
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1210 EKLRNevtVLRGENATAKSLHSVVQTLESDKVKLELKVKNLELQlKENKRQLSSSSGNTDAQAEEDERAQESQQMIDFLN 1289
Cdd:PTZ00121 1757 KKIAH---LKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVD-KKIKDIFDNFANIIEGGKEGNLVINDSKEMEDSAI 1832
|
810 820 830 840
....*....|....*....|....*....|....*....|....*.
gi 1720414379 1290 SVIVDLQRKNQDLKMKVEMMSEAALNGNGEDLNSYDSDDQEKQSKK 1335
Cdd:PTZ00121 1833 KEVADSKNMQLEEADAFEKHKFNKNNENGEDGNKEADFNKEKDLKE 1878
|
|
| NIP100 |
COG5244 |
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle ... |
211-271 |
1.66e-13 |
|
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 227569 [Multi-domain] Cd Length: 669 Bit Score: 75.49 E-value: 1.66e-13
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720414379 211 LKVGDRVLVGGTKaGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLF 271
Cdd:COG5244 4 LSVNDRVLLGDKF-GTVRFIGKTKFKDGIWIGLELDDPVGKNDGSVNGVRYFHCKKRHGIF 63
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
655-1251 |
2.07e-13 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 75.46 E-value: 2.07e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 655 IIKEKEDSLEAVKARLDSAEDQHLVEmedtlnKLQEAEIKVKELEvlqakyteqsEVIGNFTSQLSAVKEKLLDLDALRK 734
Cdd:PRK02224 181 VLSDQRGSLDQLKAQIEEKEEKDLHE------RLNGLESELAELD----------EEIERYEEQREQARETRDEADEVLE 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 735 ANSEGKLELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEKELVLTGLQDSLNQVNQVKETLEKELQTLKEKFA 814
Cdd:PRK02224 245 EHEERREELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDE 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 815 STSEEAVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEK----DDREDQLvkakEKLENDIAEIMKMS 890
Cdd:PRK02224 325 ELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAreavEDRREEI----EELEEEIEELRERF 400
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 891 GDNSSQLTKMNDELRLKERSVEELQLKLTKANENASFLQKSI--GEVTLKA----EQSQQQAARKHEEEKKELEEKLLEL 964
Cdd:PRK02224 401 GDAPVDLGNAEDFLEELREERDELREREAELEATLRTARERVeeAEALLEAgkcpECGQPVEGSPHVETIEEDRERVEEL 480
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 965 EKKMETSYNQCQDLKAKYEKASSETKT-----KHEEILQNLQKMLADTEDKLKAAQEANRDLMQDMEELKTQAD-KAKAA 1038
Cdd:PRK02224 481 EAELEDLEEEVEEVEERLERAEDLVEAedrieRLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEeKREAA 560
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1039 QTAEDAMQIMEQMTKEKTETLASLEDTKQTNARLQNELDTLkENNLKTVEELN-KSKELLSVENQKMEefkkeieTLKQA 1117
Cdd:PRK02224 561 AEAEEEAEEAREEVAELNSKLAELKERIESLERIRTLLAAI-ADAEDEIERLReKREALAELNDERRE-------RLAEK 632
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1118 AAQKSQQLSALQEENVklaEELGRTRDEVTSHQ-KLEEErsvlnnqllemkkslpsntLRESEfrkdadEEKASLQKSIs 1196
Cdd:PRK02224 633 RERKRELEAEFDEARI---EEAREDKERAEEYLeQVEEK-------------------LDELR------EERDDLQAEI- 683
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*..
gi 1720414379 1197 ltsALLTEKDAELEKLRNEVTVLRGENATAKSLHSVVQTLES--DKVKLELKVKNLE 1251
Cdd:PRK02224 684 ---GAVENELEELEELRERREALENRVEALEALYDEAEELESmyGDLRAELRQRNVE 737
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
610-1215 |
4.68e-13 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 74.20 E-value: 4.68e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 610 AELKTQIERLRLdyqheieslQSKQDSERSAHAKEMETMQAKLMKI-IKEKEDSLEAVKARLDSAEdqhlvemedtlnkl 688
Cdd:COG1196 196 GELERQLEPLER---------QAEKAERYRELKEELKELEAELLLLkLRELEAELEELEAELEELE-------------- 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 689 QEAEIKVKELEVLQAKYTEQSEVIGNFTSQLSAVKEKLLDLDAlRKANSEGKLELETLR-----QQLEGAEKQIKNLETE 763
Cdd:COG1196 253 AELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLA-ELARLEQDIARLEERrreleERLEELEEELAELEEE 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 764 RNAESSKANSITKELQEKELVLTGLQDSLNQVNQVKETLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQKEEQFNV 843
Cdd:COG1196 332 LEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEA 411
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 844 LSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLENDIAEIMKmsgdNSSQLTKMNDELRLKERSVEELQLKLTKANE 923
Cdd:COG1196 412 LLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEE----EEEALLELLAELLEEAALLEAALAELLEELA 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 924 NASFLQKSIGEVTLKAEQSQQQAARKHEEEKKELEEKLLELEKKMETSYNqcQDLKAKYEKASSETKTKHEEILQNLQKM 1003
Cdd:COG1196 488 EAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYE--AALEAALAAALQNIVVEDDEVAAAAIEY 565
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1004 LADTedKLKAAQEANRDLMQDMEELKTQADKAKAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNARLQNELDTLKENN 1083
Cdd:COG1196 566 LKAA--KAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLA 643
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1084 LKTVEELNKSKELLSVENQKMEEFKKEIETLKQAAAQKSQQLSALQEENVKLAEELGRTRDEVTSHQKLEEERSVLNNQL 1163
Cdd:COG1196 644 GRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEE 723
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|..
gi 1720414379 1164 LEMKKSLPSNTLRESEFRKDADEEKASLQKSISLTSALLTEKDAELEKLRNE 1215
Cdd:COG1196 724 EALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLERE 775
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
742-1264 |
5.19e-13 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 73.90 E-value: 5.19e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 742 ELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEKELVLTGLQDSLNQVNQVKETLEKELQTLKEKFASTSEEAV 821
Cdd:TIGR04523 41 KLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKINSEIKNDKEQKN 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 822 SAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLENDIAEIMKMSGDNSSQLTKMN 901
Cdd:TIGR04523 121 KLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLE 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 902 ---DELRLKERSVEELQLKLTKANENASFLQKSIGEVTLKAEQSQQQAARKHeeekkeleekllelekkmetsyNQCQDL 978
Cdd:TIGR04523 201 lllSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQ----------------------TQLNQL 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 979 KAKYEKASSETKTKHEEILQNLQKmLADTEDKLKAAQEANRDLMQDMEELKTQADKAKAAQTAEDAMQIMEQMTKEKTet 1058
Cdd:TIGR04523 259 KDEQNKIKKQLSEKQKELEQNNKK-IKELEKQLNQLKSEISDLNNQKEQDWNKELKSELKNQEKKLEEIQNQISQNNK-- 335
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1059 laSLEDTKQTNARLQNELDTLKENNLKTVEELNKSKELLSVENQKMEEFKKEIETL--------------KQAAAQKSQQ 1124
Cdd:TIGR04523 336 --IISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLesqindleskiqnqEKLNQQKDEQ 413
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1125 LSALQEENVKLAEELGRTRDEVTSHQK----LEEERSVLNNQLLEMKKSLPSNTLRESEFRKDADEEKASLQKsislTSA 1200
Cdd:TIGR04523 414 IKKLQQEKELLEKEIERLKETIIKNNSeikdLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQ----KQK 489
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1720414379 1201 LLTEKDAELEKLRNEVTVLRGENATAK----SLHSVVQTLESDKVKLELKVKNLELQLKENKRQLSSS 1264
Cdd:TIGR04523 490 ELKSKEKELKKLNEEKKELEEKVKDLTkkisSLKEKIEKLESEKKEKESKISDLEDELNKDDFELKKE 557
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
406-1197 |
7.14e-13 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 73.61 E-value: 7.14e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 406 EAKMDQLRTMVEAADREKVELLnqLEEEKRKVEDLQFRVEEESITKGDLE------VATVSEKSRIMELEKDLAL----- 474
Cdd:pfam15921 58 EVELDSPRKIIAYPGKEHIERV--LEEYSHQVKDLQRRLNESNELHEKQKfylrqsVIDLQTKLQEMQMERDAMAdirrr 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 475 RAQEVAELRRRLESSKPPGDVDMSLS--LLQEISALQEKLEAIHTDHQGEMTSLKEHFGAREEAFQKEI----------- 541
Cdd:pfam15921 136 ESQSQEDLRNQLQNTVHELEAAKCLKedMLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEASGKKIyehdsmstmhf 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 542 KALHTATEKLSKENESLRSKLdhankenSDVIALWKSKLETAIASHQQAMEELkvsfskgigtdsaeFAELKTQIERLRL 621
Cdd:pfam15921 216 RSLGSAISKILRELDTEISYL-------KGRIFPVEDQLEALKSESQNKIELL--------------LQQHQDRIEQLIS 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 622 DYQHEIESLQSKQDSERS---AHAKEMETMQ-------AKLMKIIKEKEDSLEAVKARLDSAEDQHLVEMEDTLNKLQEA 691
Cdd:pfam15921 275 EHEVEITGLTEKASSARSqanSIQSQLEIIQeqarnqnSMYMRQLSDLESTVSQLRSELREAKRMYEDKIEELEKQLVLA 354
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 692 EIKVKELEVLQAKYTEQSeviGNFTSQLSAV------KEKLLDLDA-----LRKANSEGKLELETLRQQLEGAEKQIKNL 760
Cdd:pfam15921 355 NSELTEARTERDQFSQES---GNLDDQLQKLladlhkREKELSLEKeqnkrLWDRDTGNSITIDHLRRELDDRNMEVQRL 431
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 761 ETERNAESSKANSitkELQEKELVLTGLQDSLNQVNQVKETLEKELQTLK---EKFASTSEEAVSAQTRMQDTVNKLHQK 837
Cdd:pfam15921 432 EALLKAMKSECQG---QMERQMAAIQGKNESLEKVSSLTAQLESTKEMLRkvvEELTAKKMTLESSERTVSDLTASLQEK 508
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 838 EEQFNVLSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLE---------NDIAEIMKMSGDNSSQLT---------- 898
Cdd:pfam15921 509 ERAIEATNAEITKLRSRVDLKLQELQHLKNEGDHLRNVQTECEalklqmaekDKVIEILRQQIENMTQLVgqhgrtagam 588
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 899 ---KMNDELRLKERSVEELQLKLTKANENASFLQKSIGEVTLKAEQSQQ-QAARKHEEEKKELEEKLLELEKKMETSYNQ 974
Cdd:pfam15921 589 qveKAQLEKEINDRRLELQEFKILKDKKDAKIRELEARVSDLELEKVKLvNAGSERLRAVKDIKQERDQLLNEVKTSRNE 668
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 975 CQDLKAKYEKASSETKTKHEEILQNLQKMladtEDKLKAAQ---EANRDLMQDMEELKTQADKAkaaqtaedAMQIMEQM 1051
Cdd:pfam15921 669 LNSLSEDYEVLKRNFRNKSEEMETTTNKL----KMQLKSAQselEQTRNTLKSMEGSDGHAMKV--------AMGMQKQI 736
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1052 TKEKTETLAsledtkqtnarLQNELDTLKEnnlkTVEELNKSKELLSVENQKMeefkkeietlkqaaaqkSQQLSALQEE 1131
Cdd:pfam15921 737 TAKRGQIDA-----------LQSKIQFLEE----AMTNANKEKHFLKEEKNKL-----------------SQELSTVATE 784
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1720414379 1132 NVKLAEELgrtrdEVTSHQKLEEERSVLNNQLLEMKKSLPSNTLRESEFRKDADEEKASLQKSISL 1197
Cdd:pfam15921 785 KNKMAGEL-----EVLRSQERRLKEKVANMEVALDKASLQFAECQDIIQRQEQESVRLKLQHTLDV 845
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
351-915 |
1.04e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 73.05 E-value: 1.04e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 351 ALQEALKEKQqhIEQLLAERDLERAEVAKATSHVGEIEQELALARdghdQHVLELEAKMDQLRTMVEAADREKVELLNQL 430
Cdd:COG1196 217 ELKEELKELE--AELLLLKLRELEAELEELEAELEELEAELEELE----AELAELEAELEELRLELEELELELEEAQAEE 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 431 EEEKRKVEDLQFRVEEESITKGDLEVATVSEKSRIMELEKDLALRAQEVAELRRRLESSKPpgDVDMSLSLLQEISALQE 510
Cdd:COG1196 291 YELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEE--ELEEAEAELAEAEEALL 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 511 KLEAIHTDHQGEMTSLKEhfgaREEAFQKEIKALHTATEKLSKENESLRSKLDHANKENSDVIALWKSKLETAIASHQQA 590
Cdd:COG1196 369 EAEAELAEAEEELEELAE----ELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEAL 444
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 591 MEELKvsfskgigtDSAEFAELKTQIERLRLDYQHEIESLQSKQDSERSAHAKEmETMQAKLMKIIKEKEDSLEAVKARL 670
Cdd:COG1196 445 EEAAE---------EEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEA-AARLLLLLEAEADYEGFLEGVKAAL 514
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 671 DSAEDQHL---VEMEDTLNKLQEAEIKVKELEVLQAKYTEQSEVignftsqlsavkekLLDLDALRKANSEGKLELETLR 747
Cdd:COG1196 515 LLAGLRGLagaVAVLIGVEAAYEAALEAALAAALQNIVVEDDEV--------------AAAAIEYLKAAKAGRATFLPLD 580
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 748 QQlegAEKQIKNLETERNAESSKANSITKELQEKELVLTGLQDSLNQVNQVKETLEKELQTLKEKFASTSEEAVSAQTRM 827
Cdd:COG1196 581 KI---RARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGS 657
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 828 QDTVNKLHQKEEQfnvLSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLK 907
Cdd:COG1196 658 AGGSLTGGSRREL---LAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAER 734
|
....*...
gi 1720414379 908 ERSVEELQ 915
Cdd:COG1196 735 EELLEELL 742
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
335-886 |
3.84e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 71.12 E-value: 3.84e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 335 LTETSSRYARKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALARDGH---DQHVLELEAKMDQ 411
Cdd:COG1196 248 LEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRrelEERLEELEEELAE 327
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 412 LRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLEVATVSEKSRIMELEKDLALRAQEVAELRRRLEsskp 491
Cdd:COG1196 328 LEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLE---- 403
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 492 pgdvdmslSLLQEISALQEKLEAIHTDHQGEMTSLKEHFGAREEAFQKEIKALHTATEKLSKENESLRSKLDHANKENSD 571
Cdd:COG1196 404 --------ELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALL 475
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 572 VIALWKSKLETAIAS----HQQAMEELKVSFSKGIGtdsaefaeLKTQIERLRLDYQHEIESLQSKQDSERSAHAKEMET 647
Cdd:COG1196 476 EAALAELLEELAEAAarllLLLEAEADYEGFLEGVK--------AALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAA 547
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 648 MQAKLMKIIKEKEDSLEAVKARLDS-AEDQHLVEMEDTLNKLQEAEIKVKELEVLQAKYTEQSEVIGNFTSQLSAVKEKL 726
Cdd:COG1196 548 LQNIVVEDDEVAAAAIEYLKAAKAGrATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTL 627
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 727 LDLDALRKANSEGKLELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEKELVLTGLQDSLNQVNQVKETLEKEL 806
Cdd:COG1196 628 VAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEER 707
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 807 QTLKEKFASTSEEAVSAQtrmqdtvnKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLENDIAEI 886
Cdd:COG1196 708 ELAEAEEERLEEELEEEA--------LEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEAL 779
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
344-886 |
4.70e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 71.12 E-value: 4.70e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 344 RKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALARDGHDQHVLELEAKMDQLRTMVEAADREK 423
Cdd:COG1196 295 AELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAEL 374
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 424 VELLNQLEEEKRKVEDLQFRVEEESITKGDLEVATVSEKSRIMELEKDLALRAQEVAELRRRLESSKppGDVDMSLSLLQ 503
Cdd:COG1196 375 AEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEE--EALEEAAEEEA 452
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 504 EISALQEKLEAIHTDHQGEMTSLKEHFGAREEAFQKEIKALHTATEKLSKENESLRSKLDHANKENSDVIALWKSKLETA 583
Cdd:COG1196 453 ELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGV 532
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 584 IASHQQAMEELKVSFSKGIGTDSAEfaELKTQIERLRLDYQHEIESLQSkqDSERSAHAKEMETMQAKLMKIIKEKEDSL 663
Cdd:COG1196 533 EAAYEAALEAALAAALQNIVVEDDE--VAAAAIEYLKAAKAGRATFLPL--DKIRARAALAAALARGAIGAAVDLVASDL 608
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 664 EAVKARLDSAEDQHLVEMEDTLNKLQEAEIKVKELEVLQAKYTEQSEVIGNFTSQLSAVKEKLLDLDALRKANSEGKLEL 743
Cdd:COG1196 609 READARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERL 688
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 744 ETLRQQLEGAEKQIKNLETERNAESSkansitKELQEKELVLTGLQDSLNQVNQVKETLEKELQTLKEKFASTSEEAVSA 823
Cdd:COG1196 689 AEEELELEEALLAEEEEERELAEAEE------ERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDL 762
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1720414379 824 QTrMQDTVNKLHQKEEQF---NVLS-SELEKLRENLTDMEAKfkekddREDqLVKAKEKLENDIAEI 886
Cdd:COG1196 763 EE-LERELERLEREIEALgpvNLLAiEEYEELEERYDFLSEQ------RED-LEEARETLEEAIEEI 821
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
742-1258 |
5.23e-12 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 70.43 E-value: 5.23e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 742 ELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEKELVLTGLQdslnQVNQVKETLEKELQTLKEKFASTSEEAV 821
Cdd:TIGR04523 160 KYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLSNLK----KKIQKNKSLESQISELKKQNNQLKDNIE 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 822 SAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLENDIAEIMKMSGDNSSQltKMN 901
Cdd:TIGR04523 236 KKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKEQDWNK--ELK 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 902 DELRLKERSVEELQLKLTKANENASFLQKSIGEvtLKAE--------QSQQQAARKHEEEKKELEEKLLELEKKMETSYN 973
Cdd:TIGR04523 314 SELKNQEKKLEEIQNQISQNNKIISQLNEQISQ--LKKEltnsesenSEKQRELEEKQNEIEKLKKENQSYKQEIKNLES 391
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 974 QCQDLKAKYEKASSETKTKHEEI--LQNLQKMLADTEDKLKAAQEANRDLMQDMEELKTQADKA--KAAQTAEDAMQIME 1049
Cdd:TIGR04523 392 QINDLESKIQNQEKLNQQKDEQIkkLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIikNLDNTRESLETQLK 471
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1050 QMTKEKTETLASLEDTKQTNARLQNELDTLKENNlktveelNKSKELLSVENQKMEEFKKEIETLKQAAAQKSQQLSALQ 1129
Cdd:TIGR04523 472 VLSRSINKIKQNLEQKQKELKSKEKELKKLNEEK-------KELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLE 544
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1130 EENVKLAEELGRtrdevtshQKLEEERSVLNNQLLEMKKSLPSNTLRESEFRKDADE---EKASLQKSISLTSALLTEKD 1206
Cdd:TIGR04523 545 DELNKDDFELKK--------ENLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQkekEKKDLIKEIEEKEKKISSLE 616
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|..
gi 1720414379 1207 AELEKLRNEvtvlrgenatAKSLHSVVQTLESDKVKLELKVKNLELQLKENK 1258
Cdd:TIGR04523 617 KELEKAKKE----------NEKLSSIIKNIKSKKNKLKQEVKQIKETIKEIR 658
|
|
| NIP100 |
COG5244 |
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle ... |
60-121 |
5.83e-12 |
|
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 227569 [Multi-domain] Cd Length: 669 Bit Score: 70.48 E-value: 5.83e-12
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1720414379 60 VGERVWVNGNKpGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPLKGIFTRP 121
Cdd:COG5244 6 VNDRVLLGDKF-GTVRFIGKTKFKDGIWIGLELDDPVGKNDGSVNGVRYFHCKKRHGIFIRP 66
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
679-1041 |
6.06e-12 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 70.87 E-value: 6.06e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 679 VEMEDTLNKLQEAEIKVKELEVLQAKYTEQSEvignftsQLSAVKEKLLDLDALRKanSEGKLELETLRQQLEGAEKQIK 758
Cdd:TIGR02169 170 RKKEKALEELEEVEENIERLDLIIDEKRQQLE-------RLRREREKAERYQALLK--EKREYEGYELLKEKEALERQKE 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 759 NLETERNAESSKANSITKELQEKELVLTGLQDSLNQVN-QVKETLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQK 837
Cdd:TIGR02169 241 AIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNkKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDA 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 838 EEQFNVLSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLEndiaeimkmsgdnssqltkmnDELRLKERSVEELQLK 917
Cdd:TIGR02169 321 EERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELK---------------------EELEDLRAELEEVDKE 379
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 918 LTKANENASFLQKSIGEVTLKAEQSQQQAARKHEEEKKELEEKLLELekkmetsyNQCQDLKAKYEKASSETKTKHEEI- 996
Cdd:TIGR02169 380 FAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLN--------AAIAGIEAKINELEEEKEDKALEIk 451
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 1720414379 997 -----LQNLQKMLADTEDKLKAAQEANRDLMQDMEELKTQADKAKAAQTA 1041
Cdd:TIGR02169 452 kqewkLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARA 501
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
390-928 |
1.74e-11 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 68.99 E-value: 1.74e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 390 ELALARDGHDQHVLELEAKMDQLRTMVEAADREKVELLNQLEEEKR----------KVEDLQFRVEEESITKGDLEVATV 459
Cdd:pfam15921 357 ELTEARTERDQFSQESGNLDDQLQKLLADLHKREKELSLEKEQNKRlwdrdtgnsiTIDHLRRELDDRNMEVQRLEALLK 436
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 460 SEKSRIM-ELEKDLAL------RAQEVAELRRRLESSKppgdvDMSLSLLQEISALQEKLEAIHTDHQGEMTSLKEHFGA 532
Cdd:pfam15921 437 AMKSECQgQMERQMAAiqgkneSLEKVSSLTAQLESTK-----EMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERA 511
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 533 REeAFQKEIKALHTATEKLSKENESLRSKLDHANKENSDVIAL-----WKSKLETAIASHQQAMEELKVSFSKGIGTDSA 607
Cdd:pfam15921 512 IE-ATNAEITKLRSRVDLKLQELQHLKNEGDHLRNVQTECEALklqmaEKDKVIEILRQQIENMTQLVGQHGRTAGAMQV 590
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 608 EFAELKTQIERLRLDYQhEIESLQSKQDSERSAHAKEMETMQAKLMKIIKEKEDSLEAVKaRLDSAEDQHLVEMEDTLNK 687
Cdd:pfam15921 591 EKAQLEKEINDRRLELQ-EFKILKDKKDAKIRELEARVSDLELEKVKLVNAGSERLRAVK-DIKQERDQLLNEVKTSRNE 668
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 688 LQEAEikvKELEVLQAKYTEQSEVIGNFTSQLsavkeklldldalrkansegKLELETLRQQLEGAEKQIKNLETERNAE 767
Cdd:pfam15921 669 LNSLS---EDYEVLKRNFRNKSEEMETTTNKL--------------------KMQLKSAQSELEQTRNTLKSMEGSDGHA 725
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 768 SSKANSITKELQEKELVLTGLQDSLNQVNQVKETLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHqkeeqfnVLSSE 847
Cdd:pfam15921 726 MKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGELE-------VLRSQ 798
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 848 LEKLRENLTDMEA-------KFKEKDD----REDQLVKAKEKLENDIAEimkMSGDNSSQLTKMNDELrLKERSVEELQL 916
Cdd:pfam15921 799 ERRLKEKVANMEValdkaslQFAECQDiiqrQEQESVRLKLQHTLDVKE---LQGPGYTSNSSMKPRL-LQPASFTRTHS 874
|
570
....*....|..
gi 1720414379 917 KLTKANENASFL 928
Cdd:pfam15921 875 NVPSSQSTASFL 886
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
717-1046 |
2.22e-11 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 68.93 E-value: 2.22e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 717 SQLSAVKEKLLDLDALRKansEGKLELETLRQQLEGAEKQIKNLETERNAESS----KANSITKELQEKELVLTGLQDSL 792
Cdd:TIGR02168 179 RKLERTRENLDRLEDILN---ELERQLKSLERQAEKAERYKELKAELRELELAllvlRLEELREELEELQEELKEAEEEL 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 793 NQVNQVKETLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDDREDQL 872
Cdd:TIGR02168 256 EELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDEL 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 873 VKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERSVEELQLKLTKANENASFLQKSIgevTLKAEQSQQQAARKHEE 952
Cdd:TIGR02168 336 AEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQI---ASLNNEIERLEARLERL 412
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 953 EKKELEEKLLELEKKMETSYNQCQDLKAKYEkassetktKHEEILQNLQKMLADTEDKLKAAQEANRDLMQDMEELKTQA 1032
Cdd:TIGR02168 413 EDRRERLQQEIEELLKKLEEAELKELQAELE--------ELEEELEELQEELERLEEALEELREELEEAEQALDAAEREL 484
|
330
....*....|....
gi 1720414379 1033 DKAKAAQTAEDAMQ 1046
Cdd:TIGR02168 485 AQLQARLDSLERLQ 498
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
904-1256 |
2.79e-11 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 68.54 E-value: 2.79e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 904 LRLKERSvEELQLKLTKANENASFLQKSIGEV-----TL-----KAEQSQQQAARKHEEEKKELEEKLLELEKKMETSYN 973
Cdd:TIGR02168 168 SKYKERR-KETERKLERTRENLDRLEDILNELerqlkSLerqaeKAERYKELKAELRELELALLVLRLEELREELEELQE 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 974 QCQDLKAKYEKASSETKTKHEEILQNLQKMLADtEDKLKAAQEANRDLMQDMEELKTQadKAKAAQTAEDAMQIMEQMTK 1053
Cdd:TIGR02168 247 ELKEAEEELEELTAELQELEEKLEELRLEVSEL-EEEIEELQKELYALANEISRLEQQ--KQILRERLANLERQLEELEA 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1054 EKTETLASLEDTKQTNARLQNELDTLKENNLKTVEELNKSKELLSVENQKMEEFKKEIETLKQAAAQKSQQLSALQEENV 1133
Cdd:TIGR02168 324 QLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIE 403
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1134 KLAEELGRTRDEVtshQKLEEERSVLNNQLLEMKKSLPSNTLRESEfrkdadEEKASLQKSISLTSALLTEKDAELEKLR 1213
Cdd:TIGR02168 404 RLEARLERLEDRR---ERLQQEIEELLKKLEEAELKELQAELEELE------EELEELQEELERLEEALEELREELEEAE 474
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1720414379 1214 NEVTVLRGENATAKSLHSVVQTLESDKVKLELKVKNLELQLKE 1256
Cdd:TIGR02168 475 QALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSG 517
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
848-1263 |
3.14e-11 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 68.17 E-value: 3.14e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 848 LEKLRENLTDMEAKFKEKDDREDQLVKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERSV----------EELQLK 917
Cdd:PRK03918 160 YENAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELeklekevkelEELKEE 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 918 LTKANENASFLQKSIGEVTLKAEQSQQQAARKHEEEKKELEEKLLELE-KKMETSYNQCQDLKAKYEKASSE---TKTKH 993
Cdd:PRK03918 240 IEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKElKEKAEEYIKLSEFYEEYLDELREiekRLSRL 319
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 994 EEILQNLQKMLADTEDK---LKAAQEANRDLMQDMEELKtqadkaKAAQTAEDAMQIMEQMTKEKTETlasledTKQTNA 1070
Cdd:PRK03918 320 EEEINGIEERIKELEEKeerLEELKKKLKELEKRLEELE------ERHELYEEAKAKKEELERLKKRL------TGLTPE 387
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1071 RLQNELDTLKENNLKTVEELNKSKELLSVENQKMEEFKKEIETLKQAAAQKSQQLSALQEEN-----VKLAEELGRTRDE 1145
Cdd:PRK03918 388 KLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTEEHrkellEEYTAELKRIEKE 467
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1146 VtshQKLEEERSVLNNQLLEMKKSLpSNTLRESEFRKDADEEKASLQKSISLTSALLTEKDAELEKLRNEVTVLRGENAT 1225
Cdd:PRK03918 468 L---KEIEEKERKLRKELRELEKVL-KKESELIKLKELAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIKS 543
|
410 420 430
....*....|....*....|....*....|....*...
gi 1720414379 1226 AKSLHSVVQTLESDKVKLELKVKNLELQLKENKRQLSS 1263
Cdd:PRK03918 544 LKKELEKLEELKKKLAELEKKLDELEEELAELLKELEE 581
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
421-888 |
4.33e-11 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 67.78 E-value: 4.33e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 421 REKVELLNQLEEEKRKVEDLQFRVEEESITKGDLEVATVSEKSRIMELEKDLALRAQEVAELR---RRLESSKPPGDVDM 497
Cdd:PRK03918 217 PELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEekvKELKELKEKAEEYI 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 498 SLS-------------------LLQEISALQEKLEAIHtdhqgEMTSLKEHFGAREEAFQKEIKALhtatEKLSKENESL 558
Cdd:PRK03918 297 KLSefyeeyldelreiekrlsrLEEEINGIEERIKELE-----EKEERLEELKKKLKELEKRLEEL----EERHELYEEA 367
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 559 RSKLDHANKENSDVIALWKSKLETAIASHQQAMEELKVSFSK---GIGTDSAEFAELKTQIERL-----------RLDYQ 624
Cdd:PRK03918 368 KAKKEELERLKKRLTGLTPEKLEKELEELEKAKEEIEEEISKitaRIGELKKEIKELKKAIEELkkakgkcpvcgRELTE 447
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 625 HEIESLQSKQDSERSAHAKEMETMQAKLMKIIKEKedsleaVKARLDSAEDQHLVEMEDTLNKLQEAEIKVKE--LEVLQ 702
Cdd:PRK03918 448 EHRKELLEEYTAELKRIEKELKEIEEKERKLRKEL------RELEKVLKKESELIKLKELAEQLKELEEKLKKynLEELE 521
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 703 AKYTEQSEV---IGNFTSQLSAVKEKLLDLDALRKANSEGKLELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQ 779
Cdd:PRK03918 522 KKAEEYEKLkekLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELGFESVEELEERLKELEPFY 601
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 780 EKELVLTGLQDSLnqvnqvkETLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQKEEQFNV-----LSSELEKLREN 854
Cdd:PRK03918 602 NEYLELKDAEKEL-------EREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEeeyeeLREEYLELSRE 674
|
490 500 510
....*....|....*....|....*....|....
gi 1720414379 855 LTDMEAKFKEKDDREDQLVKAKEKLENDIAEIMK 888
Cdd:PRK03918 675 LAGLRAELEELEKRREEIKKTLEKLKEELEEREK 708
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
775-1312 |
1.21e-10 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 66.35 E-value: 1.21e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 775 TKELQEK-ELVLTGLQDSLNQVNQVKETLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLH-------QKEEQFNVLSS 846
Cdd:pfam01576 17 VKERQQKaESELKELEKKHQQLCEEKNALQEQLQAETELCAEAEEMRARLAARKQELEEILHelesrleEEEERSQQLQN 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 847 ELEKLRENLTDMEAKFKEKDDREDQL----VKAKEKLENDIAEIMKMSGDNSsqltKMNDELRLKERSVEELQLKLTKAN 922
Cdd:pfam01576 97 EKKKMQQHIQDLEEQLDEEEAARQKLqlekVTTEAKIKKLEEDILLLEDQNS----KLSKERKLLEERISEFTSNLAEEE 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 923 ENASFLQK---------SIGEVTLKAEQSQQQAARKHEEEKKELEEKLLElekkmetsynQCQDLKAKYEKASSETKTKH 993
Cdd:pfam01576 173 EKAKSLSKlknkheamiSDLEERLKKEEKGRQELEKAKRKLEGESTDLQE----------QIAELQAQIAELRAQLAKKE 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 994 EEiLQNLQKMLADTEDKLKAAQEANRDLMQDMEELKTQADKAKAAQTAEDAMQ--IMEQMTKEKTEtlasLEDTKQTNAr 1071
Cdd:pfam01576 243 EE-LQAALARLEEETAQKNNALKKIRELEAQISELQEDLESERAARNKAEKQRrdLGEELEALKTE----LEDTLDTTA- 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1072 LQNELDTLKENNL----KTVEELNKS-----KELLSVENQKMEEFKKEIETLKQAAAQKSQQLSALQEENVKLAEELgrt 1142
Cdd:pfam01576 317 AQQELRSKREQEVtelkKALEEETRSheaqlQEMRQKHTQALEELTEQLEQAKRNKANLEKAKQALESENAELQAEL--- 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1143 RDEVTSHQKLEEERSVLNNQLLEMKKSLpSNTLREsefRKDADEEKASLQKSISLTSALLTEKDAELEKLRNEVTVLRGE 1222
Cdd:pfam01576 394 RTLQQAKQDSEHKRKKLEGQLQELQARL-SESERQ---RAELAEKLSKLQSELESVSSLLNEAEGKNIKLSKDVSSLESQ 469
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1223 NATAKSLhsvVQTLESDKVKLELKVKNLELQLKENKRQLSsssgntdaqaEEDERAQESQQMIDFLNSVIVDLQRKNQDL 1302
Cdd:pfam01576 470 LQDTQEL---LQEETRQKLNLSTRLRQLEDERNSLQEQLE----------EEEEAKRNVERQLSTLQAQLSDMKKKLEED 536
|
570
....*....|
gi 1720414379 1303 KMKVEMMSEA 1312
Cdd:pfam01576 537 AGTLEALEEG 546
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
427-1114 |
3.10e-10 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 64.66 E-value: 3.10e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 427 LNQLEEEKRKVEDLQFRVEEEsitkgdlevatvseksrIMELEKDLALRAQEVAELRRRLESSKppgdvDMSLSLLQEIS 506
Cdd:TIGR04523 126 LNKLEKQKKENKKNIDKFLTE-----------------IKKKEKELEKLNNKYNDLKKQKEELE-----NELNLLEKEKL 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 507 ALQEKLEAIHTDHqgemtSLKEHFGAREEAFQKEIKALHTATEKLSKENESLRSKLDHANKENSD---VIALWKSKLETA 583
Cdd:TIGR04523 184 NIQKNIDKIKNKL-----LKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEkttEISNTQTQLNQL 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 584 IASHQQAMEELK------VSFSKGIGTDSAEFAELKTQIERLRLDYQHEIESLQSKQDSERSAHAKEMETMQAKLMKIIK 657
Cdd:TIGR04523 259 KDEQNKIKKQLSekqkelEQNNKKIKELEKQLNQLKSEISDLNNQKEQDWNKELKSELKNQEKKLEEIQNQISQNNKIIS 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 658 EKEDSLEAVKARLDSAEDqhlvemeDTLNKLQEAEIKVKELEVLQAKYTEQSEVIGNFTSQLSAVKEKLLDLDalrKANS 737
Cdd:TIGR04523 339 QLNEQISQLKKELTNSES-------ENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQE---KLNQ 408
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 738 EGKLELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEKELVLTGLQDSLNQVNQVKETLEKELQTLKekfasts 817
Cdd:TIGR04523 409 QKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIK------- 481
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 818 eeavsaqtrmqdtvNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLENDIAEIMKMSGDNSSQL 897
Cdd:TIGR04523 482 --------------QNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDEL 547
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 898 TKMNDELR--LKERSVEELQLKLTKANENASFLQKSIGEVTLKAEQSQQQaarkheeeKKELEEKLLELEKKMETSYNQC 975
Cdd:TIGR04523 548 NKDDFELKkeNLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKE--------KKDLIKEIEEKEKKISSLEKEL 619
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 976 QDLKAKYEKASSEtKTKHEEILQNLQKMLADTEDKLKAAQEANRDLMQDMEELKTQADkakaaqtaeDAMQIMEQMTKEK 1055
Cdd:TIGR04523 620 EKAKKENEKLSSI-IKNIKSKKNKLKQEVKQIKETIKEIRNKWPEIIKKIKESKTKID---------DIIELMKDWLKEL 689
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*....
gi 1720414379 1056 TETlaslEDTKQTNARLQNELDTLKENNLKTVEELnkskellsvenQKMEEFKKEIETL 1114
Cdd:TIGR04523 690 SLH----YKKYITRMIRIKDLPKLEEKYKEIEKEL-----------KKLDEFSKELENI 733
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
333-1105 |
3.90e-10 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 64.78 E-value: 3.90e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 333 GLLTETSSRYARKISGTTALQEALK--EKQQHIEQLLAERDLERAEVAKAtshvGEIEQELALARDGHDQHVLELEAKMD 410
Cdd:PTZ00121 1098 GKAEEAKKTETGKAEEARKAEEAKKkaEDARKAEEARKAEDARKAEEARK----AEDAKRVEIARKAEDARKAEEARKAE 1173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 411 QLRTMVEAADREKVELLNQLE--EEKRKVEDLQFRVEEESITKG-DLEVATVSEKSRIMELEKDLALRAQEVAELRRRLE 487
Cdd:PTZ00121 1174 DAKKAEAARKAEEVRKAEELRkaEDARKAEAARKAEEERKAEEArKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEE 1253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 488 SSKPPGDVDMSLSLLQEISALQEKLEAIHTDHQGEMTSLKEHFGAREEAFQKEIKAL---HTATEKLSKENESLRSKLDH 564
Cdd:PTZ00121 1254 IRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKaeeAKKADEAKKKAEEAKKKADA 1333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 565 ANKENSDVialwKSKLETAIASHQQAMEELKVSFSKgigtdsAEFAELKTQIERLRLDyQHEIESLQSKQDSERSAHAKE 644
Cdd:PTZ00121 1334 AKKKAEEA----KKAAEAAKAEAEAAADEAEAAEEK------AEAAEKKKEEAKKKAD-AAKKKAEEKKKADEAKKKAEE 1402
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 645 METMQAKLMKIIKEKEDSLEAVKARLDSAEDQHLVEMEDTLNKLQEAEIKVKE---LEVLQAKYTEQSEvignfTSQLSA 721
Cdd:PTZ00121 1403 DKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEakkAEEAKKKAEEAKK-----ADEAKK 1477
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 722 VKEKLLDLDALRKANSEGKLELETLRQQlegAEKQIKNLETERNAESSKANSITKELQEKElvltglQDSLNQVNQVK-- 799
Cdd:PTZ00121 1478 KAEEAKKADEAKKKAEEAKKKADEAKKA---AEAKKKADEAKKAEEAKKADEAKKAEEAKK------ADEAKKAEEKKka 1548
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 800 ETLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDdrEDQLVKAKEkl 879
Cdd:PTZ00121 1549 DELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKA--EEAKIKAEE-- 1624
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 880 endiaeimkmsgdnssqlTKMNDELRlkeRSVEELQLKLTKANENASFLQKSIGEVTLKAEQSQQQAARKHEEEKKELEE 959
Cdd:PTZ00121 1625 ------------------LKKAEEEK---KKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKA 1683
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 960 KLLelekkmETSYNQCQDLKAKYEKASSETKTKHEEILQNLQKMLADTEDKLKAAQEANRDLMQD---MEELKT-QADKA 1035
Cdd:PTZ00121 1684 EED------EKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDkkkAEEAKKdEEEKK 1757
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720414379 1036 KAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNARLQNELDTLK-ENNLKTVEELNKSKELLSVENQKME 1105
Cdd:PTZ00121 1758 KIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDiFDNFANIIEGGKEGNLVINDSKEME 1828
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
353-853 |
7.36e-10 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 63.78 E-value: 7.36e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 353 QEALKEKQQhIEQLLAERDLeRAEVAKATSHVGEIEQELALARDGHDQHVLEL-EAKMDQLRTMVEAADREKVELLNQLE 431
Cdd:COG4913 242 EALEDAREQ-IELLEPIREL-AERYAAARERLAELEYLRAALRLWFAQRRLELlEAELEELRAELARLEAELERLEARLD 319
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 432 EEKRKVEDLQFRVEEES-ITKGDLEvatvsekSRIMELEKDLALRAQEVAELRRRLES--SKPPGDVDMSLSLLQEISAL 508
Cdd:COG4913 320 ALREELDELEAQIRGNGgDRLEQLE-------REIERLERELEERERRRARLEALLAAlgLPLPASAEEFAALRAEAAAL 392
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 509 QEKLEAIHTDHQGEMTSLKehfgAREEAFQKEIKALhtateklSKENESLRSkldhaNKEN--SDVIALwKSKLETAIAS 586
Cdd:COG4913 393 LEALEEELEALEEALAEAE----AALRDLRRELREL-------EAEIASLER-----RKSNipARLLAL-RDALAEALGL 455
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 587 HQQAM----EELKVSFSKGIGTDSAE----------------FAELKTQIERL----RLDYQH-------------EIES 629
Cdd:COG4913 456 DEAELpfvgELIEVRPEEERWRGAIErvlggfaltllvppehYAAALRWVNRLhlrgRLVYERvrtglpdperprlDPDS 535
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 630 LQSKQDSERSAHAKEMETMQAKLMKIIK-EKEDSLE----AV-------------------------------KARLDSA 673
Cdd:COG4913 536 LAGKLDFKPHPFRAWLEAELGRRFDYVCvDSPEELRrhprAItragqvkgngtrhekddrrrirsryvlgfdnRAKLAAL 615
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 674 EDQhLVEMEDTLNKLQEAeikVKELEVLQAKYTEQSEVIGNFTSQ------LSAVKEKLLDLDALRKANSEGKLELETLR 747
Cdd:COG4913 616 EAE-LAELEEELAEAEER---LEALEAELDALQERREALQRLAEYswdeidVASAEREIAELEAELERLDASSDDLAALE 691
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 748 QQLEGAEKQIKNLETERNAESSKANSITKELQEKELVLTGLQDSLNQVNQVKETLEKELqtLKEKFASTSEEAVSAQTRm 827
Cdd:COG4913 692 EQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRAL--LEERFAAALGDAVERELR- 768
|
570 580
....*....|....*....|....*.
gi 1720414379 828 QDTVNKLHQKEEQFNVLSSELEKLRE 853
Cdd:COG4913 769 ENLEERIDALRARLNRAEEELERAMR 794
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
602-1115 |
1.15e-09 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 63.16 E-value: 1.15e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 602 IGTDSAEFAELKTQIErlrldyqhEIESLQSKQDSERSAHAKEMETMQ------AKLMKIIKEKEDSLEAVKARLDSAED 675
Cdd:PRK03918 195 IKEKEKELEEVLREIN--------EISSELPELREELEKLEKEVKELEelkeeiEELEKELESLEGSKRKLEEKIRELEE 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 676 QhLVEMEDTLNKLQEAEIKVKELEVLQAKYTEQSEVIGNFTSQLSAVKEKLLDLDALRKA-------NSEGKLELETLRQ 748
Cdd:PRK03918 267 R-IEELKKEIEELEEKVKELKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGieerikeLEEKEERLEELKK 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 749 QLEGAEKQIKNLEtERNAESSKANSITKELQEKELVLTG-----LQDSLNQVNQVKETLEKELQTLKEKFASTSEEAvsa 823
Cdd:PRK03918 346 KLKELEKRLEELE-ERHELYEEAKAKKEELERLKKRLTGltpekLEKELEELEKAKEEIEEEISKITARIGELKKEI--- 421
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 824 qTRMQDTVNKLHQKEEQFNVLSSEL---------EKLRENLTDMEAKFKEKDDREDQLVKAKEKLENDIAEIMKMSGDNS 894
Cdd:PRK03918 422 -KELKKAIEELKKAKGKCPVCGRELteehrkellEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKLKE 500
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 895 SQLTKMNDELRLKERSVEELQLKLTKANENASFLQKSIGEV-TLKAEQSQQQAARKHEEEKKELEEKLLELEKKMETSYN 973
Cdd:PRK03918 501 LAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIkSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELE 580
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 974 Q------------CQDLKAKYEKASSETKTKHEeiLQNLQKMLADTEDKLKAAQEANRDLMQDMEELKTQADKAKAAQTA 1041
Cdd:PRK03918 581 ElgfesveeleerLKELEPFYNEYLELKDAEKE--LEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSE 658
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1042 EDAMQIMEQMTK------EKTETLASLEDTKQTNARLQNELdtlkENNLKTVEELNKSKELLSVENQKMEEFKKEIETLK 1115
Cdd:PRK03918 659 EEYEELREEYLElsrelaGLRAELEELEKRREEIKKTLEKL----KEELEEREKAKKELEKLEKALERVEELREKVKKYK 734
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
357-1313 |
1.96e-09 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 62.50 E-value: 1.96e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 357 KEKQQHIEQLLAERDLERAEVAKATSHVGE---IEQELALARDGHDQHVLELEAKMDQLRTMVEAADREKVELLNQLEEE 433
Cdd:pfam01576 18 KERQQKAESELKELEKKHQQLCEEKNALQEqlqAETELCAEAEEMRARLAARKQELEEILHELESRLEEEEERSQQLQNE 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 434 KRK----VEDLQFRVEEESITKGDLEVATVSEKSRIMELEKDLALRAQEVAELRRrlESSKPPGDVDMSLSLLQEISALQ 509
Cdd:pfam01576 98 KKKmqqhIQDLEEQLDEEEAARQKLQLEKVTTEAKIKKLEEDILLLEDQNSKLSK--ERKLLEERISEFTSNLAEEEEKA 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 510 EKLEAIHTDHQGEMTSLkehfgarEEAFQKEikalhtatEKLSKENESLRSKLDHANKENSDVIALWKSKLETAIASHQQ 589
Cdd:pfam01576 176 KSLSKLKNKHEAMISDL-------EERLKKE--------EKGRQELEKAKRKLEGESTDLQEQIAELQAQIAELRAQLAK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 590 AMEELKVSFSKgigtdSAEFAELKTQIERLRLDYQHEIESLQSKQDSERSAHAKEMET---MQAKLMKIIKEKEDSLE-- 664
Cdd:pfam01576 241 KEEELQAALAR-----LEEETAQKNNALKKIRELEAQISELQEDLESERAARNKAEKQrrdLGEELEALKTELEDTLDtt 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 665 AVKARLDSAEDQHLVEMEDTLnklqEAEIKVKELEVLQAKyTEQSEVIGNFTSQLSAVKEKLLDLD----ALRKANSEGK 740
Cdd:pfam01576 316 AAQQELRSKREQEVTELKKAL----EEETRSHEAQLQEMR-QKHTQALEELTEQLEQAKRNKANLEkakqALESENAELQ 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 741 LELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEKELVLTGLQDSLNQVNQVKETLEKELQTLkekfastSEEA 820
Cdd:pfam01576 391 AELRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSELESVSSLLNEAEGKNIKL-------SKDV 463
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 821 VSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLENDIAEIMKMSGDNSSQLTKM 900
Cdd:pfam01576 464 SSLESQLQDTQELLQEETRQKLNLSTRLRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQLSDMKKKLEEDAGTLEAL 543
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 901 NDELRLKERSVEELQLKLTKANENASFLQKSIGEVTLKAEQS--QQQAARKHEEEKKELEEKLLELEKKMETSYNQCQDL 978
Cdd:pfam01576 544 EEGKKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQELDDLlvDLDHQRQLVSNLEKKQKKFDQMLAEEKAISARYAEE 623
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 979 KAKYEKASSETKTKHEEILQNLQKMLadteDKLKAAQEANRDLMQDMEEL-KTQADKAKAAQTAEDAMQIMEQMTKEKTE 1057
Cdd:pfam01576 624 RDRAEAEAREKETRALSLARALEEAL----EAKEELERTNKQLRAEMEDLvSSKDDVGKNVHELERSKRALEQQVEEMKT 699
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1058 TLASLED----TKQTNARLQNELDTLK---ENNLKTVEELNKSK-ELLSVENQKME-EFKKEIETLKQAAAQKSQQLSAL 1128
Cdd:pfam01576 700 QLEELEDelqaTEDAKLRLEVNMQALKaqfERDLQARDEQGEEKrRQLVKQVRELEaELEDERKQRAQAVAAKKKLELDL 779
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1129 QEENVKLaEELGRTRDE-VTSHQKLEEERSVLNNQLLEMKKSLPS--NTLRESEfRKDADEEKASLQKSISLTSALLTEK 1205
Cdd:pfam01576 780 KELEAQI-DAANKGREEaVKQLKKLQAQMKDLQRELEEARASRDEilAQSKESE-KKLKNLEAELLQLQEDLAASERARR 857
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1206 DAELEklRNEVTVLRGENATAKSLhsvvqtLESDKVKLELKVKNLELQLKE--------NKRQLSSSSGNTDAQAEEDER 1277
Cdd:pfam01576 858 QAQQE--RDELADEIASGASGKSA------LQDEKRRLEARIAQLEEELEEeqsntellNDRLRKSTLQVEQLTTELAAE 929
|
970 980 990
....*....|....*....|....*....|....*.
gi 1720414379 1278 AQESQQmidfLNSVIVDLQRKNQDLKMKVEMMSEAA 1313
Cdd:pfam01576 930 RSTSQK----SESARQQLERQNKELKAKLQEMEGTV 961
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
538-1261 |
2.09e-09 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 62.05 E-value: 2.09e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 538 QKEIKALHTATEKLSKENESLRSKLDHANKENSDVIA------LWKSKLETAIAS----------HQQAMEELKVSFSKG 601
Cdd:pfam05483 112 RKIIEAQRKAIQELQFENEKVSLKLEEEIQENKDLIKennatrHLCNLLKETCARsaektkkyeyEREETRQVYMDLNNN 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 602 IGTDSAEFAELKTQIERLRLDYQHEIeslqsKQDSERSAHAKEmetmqaKLMKIIKEKEDSLEAVKARLDSAEDQhlveM 681
Cdd:pfam05483 192 IEKMILAFEELRVQAENARLEMHFKL-----KEDHEKIQHLEE------EYKKEINDKEKQVSLLLIQITEKENK----M 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 682 EDTLNKLQEAEIKVKELEvlqAKYTEQSEVIGNFTSQLSAVKEKLLDLD-ALRKANSEGKleleTLRQQLEGAEKQIKNL 760
Cdd:pfam05483 257 KDLTFLLEESRDKANQLE---EKTKLQDENLKELIEKKDHLTKELEDIKmSLQRSMSTQK----ALEEDLQIATKTICQL 329
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 761 ETERNAESSKANsitKELQEKELVLTGLQDSLNqvnqvkeTLEKELQTLKEKfastseeavsaqtrmqdtvnkLHQKEEQ 840
Cdd:pfam05483 330 TEEKEAQMEELN---KAKAAHSFVVTEFEATTC-------SLEELLRTEQQR---------------------LEKNEDQ 378
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 841 FNVLSSELEKLRENLTDMeAKFKEKDDREDQLVKA----KEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERSVEELQL 916
Cdd:pfam05483 379 LKIITMELQKKSSELEEM-TKFKNNKEVELEELKKilaeDEKLLDEKKQFEKIAEELKGKEQELIFLLQAREKEIHDLEI 457
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 917 KLTKANENASFLQKSIGEVTLKAEQSQQqaarKHEEEKKELEEKLLELEKKMETSYNQCQDLKaKYEKASSETKTKHEEI 996
Cdd:pfam05483 458 QLTAIKTSEEHYLKEVEDLKTELEKEKL----KNIELTAHCDKLLLENKELTQEASDMTLELK-KHQEDIINCKKQEERM 532
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 997 LQNLQKmLADTEDKLKAAQEANRdlmqdmEELKTQADKAKAAQtaedamqimeqmtkektetlasleDTKQTNARLQNEL 1076
Cdd:pfam05483 533 LKQIEN-LEEKEMNLRDELESVR------EEFIQKGDEVKCKL------------------------DKSEENARSIEYE 581
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1077 DTLKENNLKTVE-ELNKSKELLSVENQKMEEFKKEIETLKQAAAQKSQQLSALQEENVKLAEELGRTRdevtshQKLEEE 1155
Cdd:pfam05483 582 VLKKEKQMKILEnKCNNLKKQIENKNKNIEELHQENKALKKKGSAENKQLNAYEIKVNKLELELASAK------QKFEEI 655
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1156 RSVLNNQlLEMKKSLPSNTLRESEFRKDADEEKASLQKSISL-TSALLTEKDAELEKLRNEVTVLRGENATAKSLH-SVV 1233
Cdd:pfam05483 656 IDNYQKE-IEDKKISEEKLLEEVEKAKAIADEAVKLQKEIDKrCQHKIAEMVALMEKHKHQYDKIIEERDSELGLYkNKE 734
|
730 740
....*....|....*....|....*...
gi 1720414379 1234 QTLESDKVKLELKVKNLELQLKENKRQL 1261
Cdd:pfam05483 735 QEQSSAKAALEIELSNIKAELLSLKKQL 762
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
368-920 |
4.69e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 61.31 E-value: 4.69e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 368 AERDLERAEVAKATSHVGEIEQELALARDGHDQHVLELEAKMDQLRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEE 447
Cdd:PTZ00121 1324 AEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEED 1403
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 448 SitKGDLEVATVSEKSRIMELEKDLALRAQEVAELRRRLESSKPPGDVDmslsllqeiSALQEKLEAIHTDHQGEMTSLK 527
Cdd:PTZ00121 1404 K--KKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAK---------KKAEEAKKAEEAKKKAEEAKKA 1472
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 528 EHFGAREEAFQKeikalhtaTEKLSKENESLRSKLDHANKENSDVialwKSKLETAIASHQQAMEELKVSFSKGiGTDSA 607
Cdd:PTZ00121 1473 DEAKKKAEEAKK--------ADEAKKKAEEAKKKADEAKKAAEAK----KKADEAKKAEEAKKADEAKKAEEAK-KADEA 1539
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 608 EFAELKTQIERLRldYQHEIESLQSKQDSERSAHAKEMETMQAKLMKIIKEKEDSLEAVKARLDSAEDQHLVEmedTLNK 687
Cdd:PTZ00121 1540 KKAEEKKKADELK--KAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAE---EAKK 1614
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 688 LQEAEIKVKELEvlqakytEQSEVIGNFTSQLSAVKEKLLDLDALRKANSEGKLELETLRQQLEGAEKQIKNLETERNAE 767
Cdd:PTZ00121 1615 AEEAKIKAEELK-------KAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDE 1687
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 768 SSKANSITKELQEKELVLTGLQDSLNQVNQVKEtLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQKEEQFNVLSSE 847
Cdd:PTZ00121 1688 KKAAEALKKEAEEAKKAEELKKKEAEEKKKAEE-LKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEE 1766
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1720414379 848 LEKLRENLTDMEAKFKEKDDREDqlvkakEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERSVEELQLKLTK 920
Cdd:PTZ00121 1767 EKKAEEIRKEKEAVIEEELDEED------EKRRMEVDKKIKDIFDNFANIIEGGKEGNLVINDSKEMEDSAIK 1833
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
518-1336 |
7.57e-09 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 60.45 E-value: 7.57e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 518 DHQGEMTSLKEHFGAREEAFQKEIKALHT-ATEKLSKENESLRSKLDHANKENSDVIALWKSKLETAIASHQQAM----- 591
Cdd:TIGR00606 87 DVNGEECAVVRSMVCTQKTKKTEFKTLEGvITRYKHGEKVSLSSKCAEIDREMISHLGVSKAVLNNVIFCHQEDSnwpls 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 592 --EELKVSFSKGIgtDSAEFAELKTQIERLRLDYQHEIESLQS-----KQDSERSAHAKEM----ETMQAKLMKIIKEKE 660
Cdd:TIGR00606 167 egKALKQKFDEIF--SATRYIKALETLRQVRQTQGQKVQEHQMelkylKQYKEKACEIRDQitskEAQLESSREIVKSYE 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 661 DSLEAVKARLDSAEDQ--HLVEMEDTLNKLQE---------AEIKVKELEVLQAKYTEQSEVIGNFTSQLSAVKEKLLDL 729
Cdd:TIGR00606 245 NELDPLKNRLKEIEHNlsKIMKLDNEIKALKSrkkqmekdnSELELKMEKVFQGTDEQLNDLYHNHQRTVREKERELVDC 324
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 730 DALRKANSEGKLELETLRQQLEgAEKQIKNLETERNAESSKANSITKELQEKELVLTGLQDSL-------NQVNQVKETL 802
Cdd:TIGR00606 325 QRELEKLNKERRLLNQEKTELL-VEQGRLQLQADRHQEHIRARDSLIQSLATRLELDGFERGPfserqikNFHTLVIERQ 403
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 803 EKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLEND 882
Cdd:TIGR00606 404 EDEAKTAAQLCADLQSKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQLEGSSDRILELDQELRKA 483
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 883 IAEIMKMSgDNSSQLTKMNDELRLKERSVEELQLKLTKANENAsflQKSIGEVTLKAEQSQQQAARKHEEEKKELEEKLL 962
Cdd:TIGR00606 484 ERELSKAE-KNSLTETLKKEVKSLQNEKADLDRKLRKLDQEME---QLNHHTTTRTQMEMLTKDKMDKDEQIRKIKSRHS 559
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 963 ELEKKMETSYNQCQDLKAKYEKASSEtKTKHEEILQNLQKMLADTE---------DKLKAAQEAN-----------RDLM 1022
Cdd:TIGR00606 560 DELTSLLGYFPNKKQLEDWLHSKSKE-INQTRDRLAKLNKELASLEqnknhinneLESKEEQLSSyedklfdvcgsQDEE 638
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1023 QDMEELKTQADKAK---AAQTAEDAM--QIMEQMTKEKTETLASLEDTKQTNARLQNELDTLKENNLKTVEELNKSKELL 1097
Cdd:TIGR00606 639 SDLERLKEEIEKSSkqrAMLAGATAVysQFITQLTDENQSCCPVCQRVFQTEAELQEFISDLQSKLRLAPDKLKSTESEL 718
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1098 SVENQKMEEFKKEIETLKQAAAQKSQQLSALQEENVKLAEELGRTRDEVTSHQKL-------EEERSVLNNQLLEMKKSL 1170
Cdd:TIGR00606 719 KKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLlgtimpeEESAKVCLTDVTIMERFQ 798
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1171 PSNTLRESEFRKDADEEKAS-LQKSISLTSALLTEKDAELEKLRNEVTVLRG----ENATAKSLHSVVQTLESDKVKLEL 1245
Cdd:TIGR00606 799 MELKDVERKIAQQAAKLQGSdLDRTVQQVNQEKQEKQHELDTVVSKIELNRKliqdQQEQIQHLKSKTNELKSEKLQIGT 878
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1246 KVKNLElQLKENKRQLSS--SSGNTDAQAEEDERAQESQQMIDFLNSVIVDLQRKNQDLK---MKVEMMSEAALN--GNG 1318
Cdd:TIGR00606 879 NLQRRQ-QFEEQLVELSTevQSLIREIKDAKEQDSPLETFLEKDQQEKEELISSKETSNKkaqDKVNDIKEKVKNihGYM 957
|
890
....*....|....*...
gi 1720414379 1319 EDLNSYDSDDQEKQSKKK 1336
Cdd:TIGR00606 958 KDIENKIQDGKDDYLKQK 975
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
409-910 |
1.02e-08 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 60.05 E-value: 1.02e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 409 MDQLRTMVEA-ADREKVELLNQLEEEKRKVEDLQFRVEEEsitkgdlevatvseKSRIMELEKDLALRAQEVAELRRRLE 487
Cdd:PRK02224 189 LDQLKAQIEEkEEKDLHERLNGLESELAELDEEIERYEEQ--------------REQARETRDEADEVLEEHEERREELE 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 488 SskppgdvdmslsLLQEISALQEKLEAIHTDhqgemtslkehfgarEEAFQKEIKALHTATEKLSKENESLRSKLDHANK 567
Cdd:PRK02224 255 T------------LEAEIEDLRETIAETERE---------------REELAEEVRDLRERLEELEEERDDLLAEAGLDDA 307
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 568 EnSDVIALWKSKLETAIASHQQAMEELKVSFSkgigtdsaefaELKTQIERLRldyqHEIESLQSKQDSERSAhAKEMET 647
Cdd:PRK02224 308 D-AEAVEARREELEDRDEELRDRLEECRVAAQ-----------AHNEEAESLR----EDADDLEERAEELREE-AAELES 370
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 648 MQAKLMKIIKEKEDSLEAVKARLDSAEDQhlveMEDTLNKLQEAEikvKELEVLQAKYTEQSEVIGNFTSQLSAVKEKLL 727
Cdd:PRK02224 371 ELEEAREAVEDRREEIEELEEEIEELRER----FGDAPVDLGNAE---DFLEELREERDELREREAELEATLRTARERVE 443
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 728 DLDALRKA-----------NSEGKLELETLRQQLEGAEKQIKNLETERNAESSKANSItKELQEKElvltglqDSLNQVN 796
Cdd:PRK02224 444 EAEALLEAgkcpecgqpveGSPHVETIEEDRERVEELEAELEDLEEEVEEVEERLERA-EDLVEAE-------DRIERLE 515
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 797 QVKETLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDDREDQLVKAK 876
Cdd:PRK02224 516 ERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESLERIR 595
|
490 500 510
....*....|....*....|....*....|....*....
gi 1720414379 877 EKLEnDIAEIMKMSG---DNSSQLTKMNDELR--LKERS 910
Cdd:PRK02224 596 TLLA-AIADAEDEIErlrEKREALAELNDERRerLAEKR 633
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
417-1055 |
1.97e-08 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 58.92 E-value: 1.97e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 417 EAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLEVATVSEKSRIMELEKDLALRAQEVAELRRRLESSKppgdvd 496
Cdd:PRK03918 161 ENAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELE------ 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 497 mslSLLQEISALQEKLEAIhtdhQGEMTSLKEHFGARE---EAFQKEIKALH------TATEKLSKENESLRSKLDHANK 567
Cdd:PRK03918 235 ---ELKEEIEELEKELESL----EGSKRKLEEKIRELEeriEELKKEIEELEekvkelKELKEKAEEYIKLSEFYEEYLD 307
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 568 ENSDvIALWKSKLETAIASHQQAMEELKvSFSKGIGTDSAEFAELKTQIERLRLDYQhEIESLQSKQDSERSAHAK---- 643
Cdd:PRK03918 308 ELRE-IEKRLSRLEEEINGIEERIKELE-EKEERLEELKKKLKELEKRLEELEERHE-LYEEAKAKKEELERLKKRltgl 384
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 644 EMETMQAKLMKIIKEK---EDSLEAVKARLDSAEdQHLVEMEDTLNKLQEAEIKVKeleVLQAKYTEQ--SEVIGNFTSQ 718
Cdd:PRK03918 385 TPEKLEKELEELEKAKeeiEEEISKITARIGELK-KEIKELKKAIEELKKAKGKCP---VCGRELTEEhrKELLEEYTAE 460
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 719 LSAVKEklldldalrkansegklELETLRQQLEGAEKQIKNLETERNAES--SKANSITKELQEkelvltgLQDSLNQVN 796
Cdd:PRK03918 461 LKRIEK-----------------ELKEIEEKERKLRKELRELEKVLKKESelIKLKELAEQLKE-------LEEKLKKYN 516
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 797 QVK-ETLEKELQTLKEKFASTSEEavsaQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDdredqlVKA 875
Cdd:PRK03918 517 LEElEKKAEEYEKLKEKLIKLKGE----IKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELG------FES 586
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 876 KEKLENDIAEIMKMSgDNSSQLTKMNDELRLKERSVEELQLKLTKANENASFLQKSIGEVTLKAEQSQ----QQAARKHE 951
Cdd:PRK03918 587 VEELEERLKELEPFY-NEYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEkkysEEEYEELR 665
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 952 EEKKELEEKLLELEKKMETSYNQCQDLKAKYE--KASSETKTKHEEILQNLQKMLADTEDklkaaqeanrdLMQDMEELK 1029
Cdd:PRK03918 666 EEYLELSRELAGLRAELEELEKRREEIKKTLEklKEELEEREKAKKELEKLEKALERVEE-----------LREKVKKYK 734
|
650 660
....*....|....*....|....*.
gi 1720414379 1030 TQADKAKAAQTAEDAMQIMEQMTKEK 1055
Cdd:PRK03918 735 ALLKERALSKVGEIASEIFEELTEGK 760
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
708-926 |
2.36e-08 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 57.85 E-value: 2.36e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 708 QSEVIGNFTSQLSAVKEKLL----DLDALRKANSEGKLELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEKEL 783
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAelekELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 784 VLTGLQDSLNQVNQvkeTLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFK 863
Cdd:COG4942 98 ELEAQKEELAELLR---ALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERA 174
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1720414379 864 EKDDREDQLVKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERSVEELQLKLTKANENAS 926
Cdd:COG4942 175 ELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAA 237
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
404-1343 |
3.48e-08 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 58.52 E-value: 3.48e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 404 ELEAKMDQLRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEE--ESITKGDLEVATVSE-KSRIMELEKDLALRAQEV- 479
Cdd:TIGR01612 541 EIEAGLKESYELAKNWKKLIHEIKKELEEENEDSIHLEKEIKDlfDKYLEIDDEIIYINKlKLELKEKIKNISDKNEYIk 620
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 480 --AELRRRLESSKPPGDVDMSLSLLQEISALQEKlEAIHTDHQGEMTSLkehfgareeaFQKEIKALHTATEKLSKENes 557
Cdd:TIGR01612 621 kaIDLKKIIENNNAYIDELAKISPYQVPEHLKNK-DKIYSTIKSELSKI----------YEDDIDALYNELSSIVKEN-- 687
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 558 lrsklDHANKENsdvialwKSKLEtaiashqqameelkvsfskgigtdsaefaELKTQIERlrldyqhEIESLQSKQDSE 637
Cdd:TIGR01612 688 -----AIDNTED-------KAKLD-----------------------------DLKSKIDK-------EYDKIQNMETAT 719
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 638 RSAHAKEMETMQAKLMKIIKEKEDSLEAvkarldsaedqhlvEMEDTLNK-LQEAEIKVKELEVLQAKYTEQSEVIGNFT 716
Cdd:TIGR01612 720 VELHLSNIENKKNELLDIIVEIKKHIHG--------------EINKDLNKiLEDFKNKEKELSNKINDYAKEKDELNKYK 785
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 717 SQLSAVKEKLLDLDALrkansegkleletlrqqlegaeKQIKNLETERNAESSKANSITKELQEKELVLTglqdslnqVN 796
Cdd:TIGR01612 786 SKISEIKNHYNDQINI----------------------DNIKDEDAKQNYDKSKEYIKTISIKEDEIFKI--------IN 835
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 797 QVKetlekelqTLKEKFASTSEEAVSAQTRMQDTVNKLHqkeEQFNVLSSEL--EKLRENLTDMEAKFKEkddredqlvk 874
Cdd:TIGR01612 836 EMK--------FMKDDFLNKVDKFINFENNCKEKIDSEH---EQFAELTNKIkaEISDDKLNDYEKKFND---------- 894
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 875 aKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERSVEELQLKLTKANENASFLQKSIGevTLKAEQSqqqaarkheeek 954
Cdd:TIGR01612 895 -SKSLINEINKSIEEEYQNINTLKKVDEYIKICENTKESIEKFHNKQNILKEILNKNID--TIKESNL------------ 959
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 955 keleekllelekkMETSYnqcqdlKAKYEKASSETKTKHEEILQNLQkmLADTEDKlkaaqeaNRDLMQDMEELKTQADK 1034
Cdd:TIGR01612 960 -------------IEKSY------KDKFDNTLIDKINELDKAFKDAS--LNDYEAK-------NNELIKYFNDLKANLGK 1011
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1035 AKAA------QTAEDAMQIMEQMTKEKTETLASLEDTKQTNarLQNELDTLKENNLKTVEELNksKELLSVENQKMEEFK 1108
Cdd:TIGR01612 1012 NKENmlyhqfDEKEKATNDIEQKIEDANKNIPNIEIAIHTS--IYNIIDEIEKEIGKNIELLN--KEILEEAEINITNFN 1087
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1109 KEIETLKQAAAQksqqlSALQEENVKLAEELGRTRDEV-TSHQKLEEERsvlnNQLLEMKKslpsntlrESEfrKDADEE 1187
Cdd:TIGR01612 1088 EIKEKLKHYNFD-----DFGKEENIKYADEINKIKDDIkNLDQKIDHHI----KALEEIKK--------KSE--NYIDEI 1148
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1188 KASLQKSISLTSALLTEKDAE--LEKLRNEVTVLRGEN---ATAKSLHSVVQTLESDKVKLElKVKNLELQLKENKrqls 1262
Cdd:TIGR01612 1149 KAQINDLEDVADKAISNDDPEeiEKKIENIVTKIDKKKniyDEIKKLLNEIAEIEKDKTSLE-EVKGINLSYGKNL---- 1223
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1263 sssgNTDAQAEEDERAQESQQMIDFLNSVIVDLQR-KNQDLKMKVEMMSEAALNGNGEDLNSYDSDDQEKQ--SKKKPRL 1339
Cdd:TIGR01612 1224 ----GKLFLEKIDEEKKKSEHMIKAMEAYIEDLDEiKEKSPEIENEMGIEMDIKAEMETFNISHDDDKDHHiiSKKHDEN 1299
|
....
gi 1720414379 1340 FCDI 1343
Cdd:TIGR01612 1300 ISDI 1303
|
|
| HCR |
pfam07111 |
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha ... |
689-1260 |
5.70e-08 |
|
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha helical coiled-coil rod HCR proteins. The function of HCR is unknown but it has been implicated in psoriasis in humans and is thought to affect keratinocyte proliferation.
Pssm-ID: 284517 [Multi-domain] Cd Length: 749 Bit Score: 57.45 E-value: 5.70e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 689 QEAEIKVKELEVLQAKYTEQSEVIGNFTSQLSAVKEKLLDLDALRKANSEGKLELETLRQQLEGAEKQIKNLETERNAES 768
Cdd:pfam07111 63 QQAELISRQLQELRRLEEEVRLLRETSLQQKMRLEAQAMELDALAVAEKAGQAEAEGLRAALAGAEMVRKNLEEGSQREL 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 769 SKANSITKElqEKELVLTGLQDSLNQVNQVKETLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQKEEQFNVLSSEL 848
Cdd:pfam07111 143 EEIQRLHQE--QLSSLTQAHEEALSSLTSKAEGLEKSLNSLETKRAGEAKQLAEAQKEAELLRKQLSKTQEELEAQVTLV 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 849 EKLRENLTDM---EAKFKEKDDREDQLVKAKEKLENDIAEI---MKMSGDNSSQLTKM----NDELRLKERSVEELQLKL 918
Cdd:pfam07111 221 ESLRKYVGEQvppEVHSQTWELERQELLDTMQHLQEDRADLqatVELLQVRVQSLTHMlalqEEELTRKIQPSDSLEPEF 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 919 TKANEN--ASFLQKSIG-EVTLKAEQSQQQAARKHEEEKKELEEKLLELEKKMETSYNQC-QDLKAKYEKASSETKT--- 991
Cdd:pfam07111 301 PKKCRSllNRWREKVFAlMVQLKAQDLEHRDSVKQLRGQVAELQEQVTSQSQEQAILQRAlQDKAAEVEVERMSAKGlqm 380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 992 ---KHEEILQNLQKMLADTEDKLKAAQEANRDLMQDMEELKTQADKAKA---------------AQTAEDAMQIMEQMTK 1053
Cdd:pfam07111 381 elsRAQEARRRQQQQTASAEEQLKFVVNAMSSTQIWLETTMTRVEQAVAripslsnrlsyavrkVHTIKGLMARKVALAQ 460
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1054 EKTETLASLEDTKQTNARLQNELDTLKENNLKTVEELNKSKELLSVE---------------NQKMEEFKKEIETLKQAA 1118
Cdd:pfam07111 461 LRQESCPPPPPAPPVDADLSLELEQLREERNRLDAELQLSAHLIQQEvgrareqgeaerqqlSEVAQQLEQELQRAQESL 540
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1119 AQKSQQLSALQEENVKLAEELGRTRDEVTSHQK-----LEEERSVLNNQLLEmkkSLPSNTLRESEFRKDADEEKASLQK 1193
Cdd:pfam07111 541 ASVGQQLEVARQGQQESTEEAASLRQELTQQQEiygqaLQEKVAEVETRLRE---QLSDTKRRLNEARREQAKAVVSLRQ 617
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1720414379 1194 sISLTSALLTEKDAELEKLRNEVTVLRGENATAKslhsvVQTLESDKvKLELKVKNLELQLKENKRQ 1260
Cdd:pfam07111 618 -IQHRATQEKERNQELRRLQDEARKEEGQRLARR-----VQELERDK-NLMLATLQQEGLLSRYKQQ 677
|
|
| CLIP1_ZNF |
pfam16641 |
CLIP1 zinc knuckle; This zinc knuckle domain is found tandemly repeated at the C-terminal of ... |
1378-1394 |
1.02e-07 |
|
CLIP1 zinc knuckle; This zinc knuckle domain is found tandemly repeated at the C-terminal of the cytoplasmic linker protein CLIP1 (CLIP170). It forms a complex with the CAP-Gly domain of Dynactin.
Pssm-ID: 465212 Cd Length: 17 Bit Score: 49.00 E-value: 1.02e-07
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
335-803 |
1.42e-07 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 56.20 E-value: 1.42e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 335 LTETSSRYARKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALARDGHD----------QHVLE 404
Cdd:PRK02224 239 ADEVLEEHEERREELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGlddadaeaveARREE 318
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 405 LEAKMDQLRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLEVATVSEKSRIMELEKDLALRAQEVAELRR 484
Cdd:PRK02224 319 LEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRE 398
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 485 RLESSkpPGDVDMSLSLLQEisaLQEKLEAIHTDHQGEMTSLKEHFGAREEAFQ-----------KEIK-ALHTAT---- 548
Cdd:PRK02224 399 RFGDA--PVDLGNAEDFLEE---LREERDELREREAELEATLRTARERVEEAEAlleagkcpecgQPVEgSPHVETieed 473
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 549 ----EKLSKENESLRSKLDHANKENSDVIALwkSKLETAIASHQQAMEELkvsfSKGIGTDSAEFAELKTQIERLRldyq 624
Cdd:PRK02224 474 rervEELEAELEDLEEEVEEVEERLERAEDL--VEAEDRIERLEERREDL----EELIAERRETIEEKRERAEELR---- 543
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 625 HEIESLQSKQDSERSAHAKEMETMQAKLMKiIKEKEDSLEAVKARLDSAEDqhlveMEDTLNKLQEAEikvKELEVLQAK 704
Cdd:PRK02224 544 ERAAELEAEAEEKREAAAEAEEEAEEAREE-VAELNSKLAELKERIESLER-----IRTLLAAIADAE---DEIERLREK 614
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 705 YTEQSEVIGNFTSQLSAVKEKLLDLDALRKAN--SEGKLELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEke 782
Cdd:PRK02224 615 REALAELNDERRERLAEKRERKRELEAEFDEAriEEAREDKERAEEYLEQVEEKLDELREERDDLQAEIGAVENELEE-- 692
|
490 500
....*....|....*....|.
gi 1720414379 783 lvLTGLQDSLNQVNQVKETLE 803
Cdd:PRK02224 693 --LEELRERREALENRVEALE 711
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
532-1134 |
1.62e-07 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 56.13 E-value: 1.62e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 532 AREEAFQKEIKALHTATEKLSKENESLR-----SKLDHANKENSDVIALWKSKLETAIASHQQAMEELKVSFSKGIGTDS 606
Cdd:TIGR00618 267 ARIEELRAQEAVLEETQERINRARKAAPlaahiKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRL 346
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 607 AEFAELKTQIERLRLDYQHEIESLQSKQDSERS-----AHAKEMETMQAKLMKIIKEKEDSLEAVKARLDSAED---QHL 678
Cdd:TIGR00618 347 LQTLHSQEIHIRDAHEVATSIREISCQQHTLTQhihtlQQQKTTLTQKLQSLCKELDILQREQATIDTRTSAFRdlqGQL 426
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 679 VEMEDTlnklQEAEIKVKELEVLQAKYTEQSEVIGNFTSQ-----LSAVKEKLLDLDALRKANSEGKLELETLRQQLEGA 753
Cdd:TIGR00618 427 AHAKKQ----QELQQRYAELCAAAITCTAQCEKLEKIHLQesaqsLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEE 502
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 754 EKQIKNLETERNAESSKANsitkELQEKELVLTGLQDSLNQVNQVKETLEKELQTLKEKFASTSEEAVSAQTRMQDTVNK 833
Cdd:TIGR00618 503 PCPLCGSCIHPNPARQDID----NPGPLTRRMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQC 578
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 834 LHQKEEQFNVLSSELEKLREnLTDMEAKFKEKDDREDQLVKAKEKLENDIAEImkmsgdnSSQLTKMNDELRLKERSVEE 913
Cdd:TIGR00618 579 DNRSKEDIPNLQNITVRLQD-LTEKLSEAEDMLACEQHALLRKLQPEQDLQDV-------RLHLQQCSQELALKLTALHA 650
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 914 LQLKLTKANENASFLQ--------KSIGEVTLKAEQSQQQAARKHEEEKKELEEKLLELEKKMETSYNQCQDLKAKYEKA 985
Cdd:TIGR00618 651 LQLTLTQERVREHALSirvlpkelLASRQLALQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEIENASSSL 730
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 986 SSETKTKHEEILQNLQKMLADTEDKLKAAQEAN-RDLMQDMEELKTQADKAKAAQTAEDAMQIMEQMTKEKTETLASLE- 1063
Cdd:TIGR00618 731 GSDLAAREDALNQSLKELMHQARTVLKARTEAHfNNNEEVTAALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGq 810
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1720414379 1064 --DTKQTNARLQNELDTLKENNLKT-VEELNKSKELLSVENQKMEEFKKEIETLKQAAAQKSQQLSALQEENVK 1134
Cdd:TIGR00618 811 eiPSDEDILNLQCETLVQEEEQFLSrLEEKSATLGEITHQLLKYEECSKQLAQLTQEQAKIIQLSDKLNGINQI 884
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
334-1283 |
2.04e-07 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 55.95 E-value: 2.04e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 334 LLTETSSRYARKISGTTALQEALKEKQQHIEQLlaERDLERAEVAKATSHVGEIEQELALARdgHDQHVLELEAKMDQLR 413
Cdd:pfam01576 76 ILHELESRLEEEEERSQQLQNEKKKMQQHIQDL--EEQLDEEEAARQKLQLEKVTTEAKIKK--LEEDILLLEDQNSKLS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 414 TMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLEVATVSEKSRIMELEKDLALRAQEVAELRRRLesskppg 493
Cdd:pfam01576 152 KERKLLEERISEFTSNLAEEEEKAKSLSKLKNKHEAMISDLEERLKKEEKGRQELEKAKRKLEGESTDLQEQI------- 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 494 dVDMSLSLLQEISALQEKLEAIhtdhQGEMTSLKEHFGAREEAfQKEIKALHTATEKLSKENESLRSKLDHANKENSDVi 573
Cdd:pfam01576 225 -AELQAQIAELRAQLAKKEEEL----QAALARLEEETAQKNNA-LKKIRELEAQISELQEDLESERAARNKAEKQRRDL- 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 574 alwkskletaiashQQAMEELKVSFSKGIGTDSAEfAELKTQIERlrldyqhEIESLQSKQDSERSAHAKEMETMQAKLM 653
Cdd:pfam01576 298 --------------GEELEALKTELEDTLDTTAAQ-QELRSKREQ-------EVTELKKALEEETRSHEAQLQEMRQKHT 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 654 KIIKEKED----------SLEAVKARLDSAEDQHLVEMEDTLNKLQEAEIKVKELEV----LQAKYTEQSEVIGNFTSQL 719
Cdd:pfam01576 356 QALEELTEqleqakrnkaNLEKAKQALESENAELQAELRTLQQAKQDSEHKRKKLEGqlqeLQARLSESERQRAELAEKL 435
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 720 SAVKeklLDLDALRKANSEGKLELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEKELVLTGLQDSLNQVNQVK 799
Cdd:pfam01576 436 SKLQ---SELESVSSLLNEAEGKNIKLSKDVSSLESQLQDTQELLQEETRQKLNLSTRLRQLEDERNSLQEQLEEEEEAK 512
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 800 ETLEKELQTLK----------EKFASTSEEAVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDDRE 869
Cdd:pfam01576 513 RNVERQLSTLQaqlsdmkkklEEDAGTLEALEEGKKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQELDDLLVDLDHQ 592
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 870 DQLVKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERSVEELQLKLTKANENASFLQKSIGEVT--LKAEQSQQQAA 947
Cdd:pfam01576 593 RQLVSNLEKKQKKFDQMLAEEKAISARYAEERDRAEAEAREKETRALSLARALEEALEAKEELERTNkqLRAEMEDLVSS 672
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 948 rkheeekkeleekllelekkmetsynqcQDLKAKYEKASSETKTKHEEILQNLQKMLADTEDKLKAAQEANRDLMQDMEE 1027
Cdd:pfam01576 673 ----------------------------KDDVGKNVHELERSKRALEQQVEEMKTQLEELEDELQATEDAKLRLEVNMQA 724
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1028 LKTQADKAKAAQTaEDAMQIMEQMTKEKTETLASLEDTKQTNA-------RLQNELDTLKENnlktVEELNKSKE----L 1096
Cdd:pfam01576 725 LKAQFERDLQARD-EQGEEKRRQLVKQVRELEAELEDERKQRAqavaakkKLELDLKELEAQ----IDAANKGREeavkQ 799
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1097 LSVENQKMEEFKKEIETLKQA-------AAQKSQQLSALQEENVKLAEELGRT-RDEVTSHQKLEEERSVLNNQLLemKK 1168
Cdd:pfam01576 800 LKKLQAQMKDLQRELEEARASrdeilaqSKESEKKLKNLEAELLQLQEDLAASeRARRQAQQERDELADEIASGAS--GK 877
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1169 SLPSNTLRESEFR-KDADEEKASLQKSISLTSALLTEKDAELEKLRNEvtvLRGENATAKSLHSVVQTLESDKVKLELKV 1247
Cdd:pfam01576 878 SALQDEKRRLEARiAQLEEELEEEQSNTELLNDRLRKSTLQVEQLTTE---LAAERSTSQKSESARQQLERQNKELKAKL 954
|
970 980 990
....*....|....*....|....*....|....*...
gi 1720414379 1248 KNLELQLKENKRQLSSSSGNTDAQAEE--DERAQESQQ 1283
Cdd:pfam01576 955 QEMEGTVKSKFKSSIAALEAKIAQLEEqlEQESRERQA 992
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
409-1024 |
2.21e-07 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 55.69 E-value: 2.21e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 409 MDQLRTMVEAAD--REKVELLNQLEEEKRKVEDLQfrveeESITKGDLEVATVseksRIMELEKDLALRAQEVAELRRRL 486
Cdd:COG4913 234 FDDLERAHEALEdaREQIELLEPIRELAERYAAAR-----ERLAELEYLRAAL----RLWFAQRRLELLEAELEELRAEL 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 487 ESskppgdvdmslsLLQEISALQEKLEAIHTDHQGEMTSLKEHFGAREEAFQKEIKAlhtateklskenesLRSKLDhan 566
Cdd:COG4913 305 AR------------LEAELERLEARLDALREELDELEAQIRGNGGDRLEQLEREIER--------------LERELE--- 355
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 567 kensdvialwksKLETAIASHQQAMEELKVSFSkgigTDSAEFAELKTQIERLRLDYQHEIESLQSKQDSERSAHakeme 646
Cdd:COG4913 356 ------------ERERRRARLEALLAALGLPLP----ASAEEFAALRAEAAALLEALEEELEALEEALAEAEAAL----- 414
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 647 tmqAKLMKIIKEKEDSLEAVKARlDSAEDQHLVEMEDTLNklQEAEIKVKEL----EVLQAKYTEQS-----E-VIGNF- 715
Cdd:COG4913 415 ---RDLRRELRELEAEIASLERR-KSNIPARLLALRDALA--EALGLDEAELpfvgELIEVRPEEERwrgaiErVLGGFa 488
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 716 TSQLsaVKEKLLDlDALRKANSEgKLEletLRQQLEGAEKQIKNLETERnaesSKANSITKELQEKELVLTG-LQDSLNQ 794
Cdd:COG4913 489 LTLL--VPPEHYA-AALRWVNRL-HLR---GRLVYERVRTGLPDPERPR----LDPDSLAGKLDFKPHPFRAwLEAELGR 557
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 795 VNQVK--ETLEkELQtlKEKFASTSEEAVSAQTRM----------------QDTVNKLHQKEEQFNVLSSELEKLRENLT 856
Cdd:COG4913 558 RFDYVcvDSPE-ELR--RHPRAITRAGQVKGNGTRhekddrrrirsryvlgFDNRAKLAALEAELAELEEELAEAEERLE 634
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 857 DMEAKFKEKDDREDQLVKAKEKLENDI------AEImkmsGDNSSQLTKM---NDELRLKERSVEELQLKLTKANENASF 927
Cdd:COG4913 635 ALEAELDALQERREALQRLAEYSWDEIdvasaeREI----AELEAELERLdasSDDLAALEEQLEELEAELEELEEELDE 710
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 928 LQKSIGEVTLKAEQSQQQAARKHEEEKKELEEKLLELEkkmetsynqcQDLKAKYEKASSETKTKheEILQNLQKMLADT 1007
Cdd:COG4913 711 LKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELR----------ALLEERFAAALGDAVER--ELRENLEERIDAL 778
|
650
....*....|....*..
gi 1720414379 1008 EDKLKAAQEANRDLMQD 1024
Cdd:COG4913 779 RARLNRAEEELERAMRA 795
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
729-885 |
2.25e-07 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 53.39 E-value: 2.25e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 729 LDALRKANSEGKLELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEKELVLTGLQDSLNQVNQVKE--TLEKEL 806
Cdd:COG1579 19 LDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNNKEyeALQKEI 98
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1720414379 807 QTLKEKFASTSEEAVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLtdmEAKFKEKDDREDQLVKAKEKLENDIAE 885
Cdd:COG1579 99 ESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAEL---DEELAELEAELEELEAEREELAAKIPP 174
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
742-948 |
3.03e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 54.38 E-value: 3.03e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 742 ELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEKELVLTGLQDSLNQVNQVKETLEKELQTLKEKFASTSEEAV 821
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 822 SAQTRMQDTVNKLHQKEEQ----FNVLSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLENDIAEIMKMSGDNSSQL 897
Cdd:COG4942 101 AQKEELAELLRALYRLGRQpplaLLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALL 180
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 1720414379 898 TKMNDELRLKERSVEELQLKLTKANENASFLQKSIGEVTLKAEQSQQQAAR 948
Cdd:COG4942 181 AELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIAR 231
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
743-1166 |
4.77e-07 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 54.39 E-value: 4.77e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 743 LETLRQQLEGA-EKQIKNLETERNAESSKANSITKELQEKELVLTGLQDSLNQVNQVKETLEKELQTLKEKFASTSEE-- 819
Cdd:COG4717 40 LAFIRAMLLERlEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREEle 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 820 AVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLEndiAEIMKMSGDNSSQLTK 899
Cdd:COG4717 120 KLEKLLQLLPLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELE---ELLEQLSLATEEELQD 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 900 MNDELRLKERSVEELQLKLTKANENASFLQKSIGEVTLKAEQSQQQAARKHEEEKKELEEKLLELEKKMETSYNQCQDL- 978
Cdd:COG4717 197 LAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIa 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 979 ------------------KAKYEKASSETKTKHEEILQNLQKM-----LADTEDKLKAAQEANRDLMQDMEELKTQADKA 1035
Cdd:COG4717 277 gvlflvlgllallflllaREKASLGKEAEELQALPALEELEEEeleelLAALGLPPDLSPEELLELLDRIEELQELLREA 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1036 KAAQTAEDAMQIMEQMTK-------EKTETLASLEDTKQTNARLQNELDTLKENnlktVEELNKSKELLSVENQKmEEFK 1108
Cdd:COG4717 357 EELEEELQLEELEQEIAAllaeagvEDEEELRAALEQAEEYQELKEELEELEEQ----LEELLGELEELLEALDE-EELE 431
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 1720414379 1109 KEIETLKQAAAQKSQQLSALQEENVKLAEELGRTRDEvTSHQKLEEERSVLNNQLLEM 1166
Cdd:COG4717 432 EELEELEEELEELEEELEELREELAELEAELEQLEED-GELAELLQELEELKAELREL 488
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
665-886 |
5.70e-07 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 54.54 E-value: 5.70e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 665 AVKARLDSAEDQ--HLVEMEDTLNKLQEaeiKVKELEVLQAKYTEqsevignftsqLSAVKEKLLDLDALRKAnsegkLE 742
Cdd:COG4913 222 DTFEAADALVEHfdDLERAHEALEDARE---QIELLEPIRELAER-----------YAAARERLAELEYLRAA-----LR 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 743 LETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEKELVLTGLQDSLNQV-NQVKETLEKELQTLKEKFastsEEAV 821
Cdd:COG4913 283 LWFAQRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNgGDRLEQLEREIERLEREL----EERE 358
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1720414379 822 SAQTRMQDTVNKLHQK----EEQFNVLSSELEKLRENLTDMEAKFKEK----DDREDQLVKAKEKLENDIAEI 886
Cdd:COG4913 359 RRRARLEALLAALGLPlpasAEEFAALRAEAAALLEALEEELEALEEAlaeaEAALRDLRRELRELEAEIASL 431
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
402-1082 |
5.71e-07 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 54.46 E-value: 5.71e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 402 VLELEAKMDQLRTMVEA--ADREKVELLNQLEEEK--RKVEDLQF------------RVEEESITKGDLEVATVSEKSRI 465
Cdd:pfam12128 188 MHSKEGKFRDVKSMIVAilEDDGVVPPKSRLNRQQveHWIRDIQAiagimkirpeftKLQQEFNTLESAELRLSHLHFGY 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 466 MELEKDLALRAQEVAELRRRLESSKPPGDVDMSLS---LLQEISAL-------QEKLEAIHTDH----QGEMTSLKEH-- 529
Cdd:pfam12128 268 KSDETLIASRQEERQETSAELNQLLRTLDDQWKEKrdeLNGELSAAdaavakdRSELEALEDQHgaflDADIETAAADqe 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 530 ----FGAREEAFQKEIKALHTATEKLSKENESLRSKLDhanKENSDVIALWKSKLE----------TAIASHQQAME-EL 594
Cdd:pfam12128 348 qlpsWQSELENLEERLKALTGKHQDVTAKYNRRRSKIK---EQNNRDIAGIKDKLAkireardrqlAVAEDDLQALEsEL 424
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 595 KVSFSKGIGTDSAEFAELKTQIERLRLDYQHEIESLQSKQDSERSAhaKEMETMQAKLMKIIKEKEDsLEAVKARLDSAE 674
Cdd:pfam12128 425 REQLEAGKLEFNEEEYRLKSRLGELKLRLNQATATPELLLQLENFD--ERIERAREEQEAANAEVER-LQSELRQARKRR 501
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 675 DQHLVemedtlnKLQEAEIKVKELEvlqakyteqsevignftSQLSAVKEKLLDldalrkanSEGKLeLETLRQQLEGAE 754
Cdd:pfam12128 502 DQASE-------ALRQASRRLEERQ-----------------SALDELELQLFP--------QAGTL-LHFLRKEAPDWE 548
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 755 KQI-KNLETERNAESSKANSITKELQEKELVLTGLQDSLNQVnQVKETLEKElQTLKEKFASTSEEAVSAQTRMQdtvnk 833
Cdd:pfam12128 549 QSIgKVISPELLHRTDLDPEVWDGSVGGELNLYGVKLDLKRI-DVPEWAASE-EELRERLDKAEEALQSAREKQA----- 621
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 834 lhQKEEQFNVLSSELEKLRENLTDMEAKFKEKDDREDQLVKAKE----KLENDIAEIMKMSGDNSSQLTKMNDELRLKER 909
Cdd:pfam12128 622 --AAEEQLVQANGELEKASREETFARTALKNARLDLRRLFDEKQsekdKKNKALAERKDSANERLNSLEAQLKQLDKKHQ 699
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 910 SVEELQ--LKLTKANENASFLQKSIG----------------EVTLKAEQSQQQAARKHEEEKK----ELEEKLLELEKK 967
Cdd:pfam12128 700 AWLEEQkeQKREARTEKQAYWQVVEGaldaqlallkaaiaarRSGAKAELKALETWYKRDLASLgvdpDVIAKLKREIRT 779
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 968 METSYNQCQDLKAK------------------YEKASSETKTKHEEILQNLQKMLADTEDKLKAAQ---EANRDLMQDME 1026
Cdd:pfam12128 780 LERKIERIAVRRQEvlryfdwyqetwlqrrprLATQLSNIERAISELQQQLARLIADTKLRRAKLEmerKASEKQQVRLS 859
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*...
gi 1720414379 1027 ELKTQAD--KAKAAQTAEDAMQimEQMTKEKTETLASLEDTKQTNARLQNELDTLKEN 1082
Cdd:pfam12128 860 ENLRGLRceMSKLATLKEDANS--EQAQGSIGERLAQLEDLKLKRDYLSESVKKYVEH 915
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
662-947 |
7.16e-07 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 54.15 E-value: 7.16e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 662 SLEAVKARLDSAEDQhlvemedtlnKLQEAEIK--VKELEvlqakyteqsevignftsqlsavkEKLLDLDALRKAnseg 739
Cdd:PRK11281 37 TEADVQAQLDALNKQ----------KLLEAEDKlvQQDLE------------------------QTLALLDKIDRQ---- 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 740 KLELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEKeLVLTGLQDSLNQVNQvketlekELQTLKEKFASTSEE 819
Cdd:PRK11281 79 KEETEQLKQQLAQAPAKLRQAQAELEALKDDNDEETRETLST-LSLRQLESRLAQTLD-------QLQNAQNDLAEYNSQ 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 820 AVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLEndiaeimKMSGDNSSQLTk 899
Cdd:PRK11281 151 LVSLQTQPERAQAALYANSQRLQQIRNLLKGGKVGGKALRPSQRVLLQAEQALLNAQNDLQ-------RKSLEGNTQLQ- 222
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 1720414379 900 mndELRLKERsvEELQLKLTKANENASFLQKSIGEVTLkaEQSQQQAA 947
Cdd:PRK11281 223 ---DLLQKQR--DYLTARIQRLEHQLQLLQEAINSKRL--TLSEKTVQ 263
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
788-1043 |
9.28e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 52.84 E-value: 9.28e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 788 LQDSLNQVNQVKETLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDD 867
Cdd:COG4942 25 AEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKE 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 868 REDQLVKAKEKLENDIAEIMKMSGDNSSQLTKMndeLRLKERSVEELQLKLTKanenasfLQKSIGEVTLKAEQSQQQAA 947
Cdd:COG4942 105 ELAELLRALYRLGRQPPLALLLSPEDFLDAVRR---LQYLKYLAPARREQAEE-------LRADLAELAALRAELEAERA 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 948 RKheeekkeleekllelekkmETSYNQCQDLKAKYEKAssetKTKHEEILQNLQKMLADTEDKLKAAQEANRDLMQDMEE 1027
Cdd:COG4942 175 EL-------------------EALLAELEEERAALEAL----KAERQKLLARLEKELAELAAELAELQQEAEELEALIAR 231
|
250
....*....|....*.
gi 1720414379 1028 LKTQADKAKAAQTAED 1043
Cdd:COG4942 232 LEAEAAAAAERTPAAG 247
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
351-568 |
4.10e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.92 E-value: 4.10e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 351 ALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALARdghdQHVLELEAKMDQLRTMVEAADREKVELLNQL 430
Cdd:COG4942 24 EAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALA----RRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 431 EEEKRKVEDL---QFRVEEESITKGDLEVATVSEKSRIMELEKDLA-LRAQEVAELRRRLESSKppgdvdmslSLLQEIS 506
Cdd:COG4942 100 EAQKEELAELlraLYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLApARREQAEELRADLAELA---------ALRAELE 170
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1720414379 507 ALQEKLEAIHTDHQGEMTSLKEHFGAREEA---FQKEIKALHTATEKLSKENESLRSKLDHANKE 568
Cdd:COG4942 171 AERAELEALLAELEEERAALEALKAERQKLlarLEKELAELAAELAELQQEAEELEALIARLEAE 235
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
543-1250 |
6.01e-06 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 51.21 E-value: 6.01e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 543 ALHTATEKLSKENESLRSKldHANKENSDVIalwkSKLETAIASHQQAMEELKV-SFSKGIGTDSAEFAELKTQIerlrl 621
Cdd:TIGR01612 1048 AIHTSIYNIIDEIEKEIGK--NIELLNKEIL----EEAEINITNFNEIKEKLKHyNFDDFGKEENIKYADEINKI----- 1116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 622 dyQHEIESLQSKQDSersaHAKEMEtmqaklmKIIKEKEDSLEAVKARLDSAEDqhlveMEDTLNKLQEAEIKVKELEVL 701
Cdd:TIGR01612 1117 --KDDIKNLDQKIDH----HIKALE-------EIKKKSENYIDEIKAQINDLED-----VADKAISNDDPEEIEKKIENI 1178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 702 QAKYTEQSEVIGNFTSQLSAVKEKLLDLDALRK--------ANSEGKLELETLRQQLEGAEKQIKNLEternAESSKANS 773
Cdd:TIGR01612 1179 VTKIDKKKNIYDEIKKLLNEIAEIEKDKTSLEEvkginlsyGKNLGKLFLEKIDEEKKKSEHMIKAME----AYIEDLDE 1254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 774 ITKELQEKELVLTGLQDslnqvnqvketLEKELQTLkekfastseeavsaqtrmqdtvNKLHQKEEQFNVLSSELEKLRE 853
Cdd:TIGR01612 1255 IKEKSPEIENEMGIEMD-----------IKAEMETF----------------------NISHDDDKDHHIISKKHDENIS 1301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 854 NLTDMEAKFKEKDDREDQLVKAKEKLENDIAEIMKMSGD---------NSSQLTKMN------DELRLKERSVEELQLKL 918
Cdd:TIGR01612 1302 DIREKSLKIIEDFSEESDINDIKKELQKNLLDAQKHNSDinlylneiaNIYNILKLNkikkiiDEVKEYTKEIEENNKNI 1381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 919 TKANENASFLQKSIGE-VTLKAEQSQQQAA--RKHEEEKKELEEKLLELEKKMETSYNqcqdlkaKYEKASSETKTKHEE 995
Cdd:TIGR01612 1382 KDELDKSEKLIKKIKDdINLEECKSKIESTldDKDIDECIKKIKELKNHILSEESNID-------TYFKNADENNENVLL 1454
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 996 ILQNLQKMLADTEDKLKAAQE-ANRDLMQDMEELKTQADKAKAAQTAEDA--------MQIMEQMTKEKTETLasledTK 1066
Cdd:TIGR01612 1455 LFKNIEMADNKSQHILKIKKDnATNDHDFNINELKEHIDKSKGCKDEADKnakaieknKELFEQYKKDVTELL-----NK 1529
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1067 QTNARLQNELDTLKENNLKTVEELNKSKELLSVE----NQKMEEFKKEIETLKQAAAQKSQ--------QLSALQEEN-- 1132
Cdd:TIGR01612 1530 YSALAIKNKFAKTKKDSEIIIKEIKDAHKKFILEaeksEQKIKEIKKEKFRIEDDAAKNDKsnkaaidiQLSLENFENkf 1609
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1133 VKLAEELGRTRDEVTSHQKLEEERSVL--NNQLLEMKKSLPS-NTLResEFRKDADEEKaslqKSISLTSALLTEKDAEL 1209
Cdd:TIGR01612 1610 LKISDIKKKINDCLKETESIEKKISSFsiDSQDTELKENGDNlNSLQ--EFLESLKDQK----KNIEDKKKELDELDSEI 1683
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1210 EKLRN---------EVTVLRGENATAKSLHsvvQTLESDKVKLELKVKNL 1250
Cdd:TIGR01612 1684 EKIEIdvdqhkknyEIGIIEKIKEIAIANK---EEIESIKELIEPTIENL 1730
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
355-528 |
6.77e-06 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 50.63 E-value: 6.77e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 355 ALKEKQQHIEQLLAE---RDLERAEVAKATS-----------HVGEIEQELALARDGHDQHVLELEAKMDQLRTMVEAAD 420
Cdd:COG2433 347 AYKNKFERVEKKVPPdvdRDEVKARVIRGLSieealeeliekELPEEEPEAEREKEHEERELTEEEEEIRRLEEQVERLE 426
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 421 REKVELLNQLEEEKRKVEDLQFRVEEESitkgdlevatvSEKSRIMELEKDLALRAQEVAELRRRLESSKppgdvdmsls 500
Cdd:COG2433 427 AEVEELEAELEEKDERIERLERELSEAR-----------SEERREIRKDREISRLDREIERLERELEEER---------- 485
|
170 180 190
....*....|....*....|....*....|..
gi 1720414379 501 llQEISALQEKLE----AIHTDHQGEMTSLKE 528
Cdd:COG2433 486 --ERIEELKRKLErlkeLWKLEHSGELVPVKV 515
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
976-1307 |
8.42e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 50.42 E-value: 8.42e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 976 QDLKAKYEKASSETKTKHEEIlQNLQKMLADTEDKLKAAQEANRDLMQDMEELKTQADKAKA-----AQTAEDAMQIMEQ 1050
Cdd:PRK02224 240 DEVLEEHEERREELETLEAEI-EDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAeagldDADAEAVEARREE 318
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1051 MTKEKTETLASLEDTKQTNARLQNELDTLKENNLKTVE--------------ELNKSKELLSVENQKMEEFKKEIETLKQ 1116
Cdd:PRK02224 319 LEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEEraeelreeaaelesELEEAREAVEDRREEIEELEEEIEELRE 398
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1117 AAAQKSQQLSALQEENVKLAEELGRTRDEVTSHQ-KLEEERSVL--NNQLLEMKKSLPSNTLRESEFRKDADEEKaslqk 1193
Cdd:PRK02224 399 RFGDAPVDLGNAEDFLEELREERDELREREAELEaTLRTARERVeeAEALLEAGKCPECGQPVEGSPHVETIEED----- 473
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1194 sisltSALLTEKDAELEKLRNEVTVLRGENATAKSLHSVVQTLESDKVKLELKVKNLELQ---LKENKRQLSSS---SGN 1267
Cdd:PRK02224 474 -----RERVEELEAELEDLEEEVEEVEERLERAEDLVEAEDRIERLEERREDLEELIAERretIEEKRERAEELrerAAE 548
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1720414379 1268 TDAQAEE-DERAQESQQMIDFLNSVIVDLQRKNQDLKMKVE 1307
Cdd:PRK02224 549 LEAEAEEkREAAAEAEEEAEEAREEVAELNSKLAELKERIE 589
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
335-594 |
1.65e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 49.53 E-value: 1.65e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 335 LTETSSRYARKISGTTALQEALKEKQQHIEQLlAERDLERAEVAKATSHVGEIEQELALARDGHDQhVLELEAKMDQLRT 414
Cdd:COG4913 622 LEEELAEAEERLEALEAELDALQERREALQRL-AEYSWDEIDVASAEREIAELEAELERLDASSDD-LAALEEQLEELEA 699
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 415 MVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLEVATVSEKSRIMELEKDLALRAQEVAELRRRLEsskppgd 494
Cdd:COG4913 700 ELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAALGDAVERELRENLE------- 772
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 495 vdmslsllQEISALQEKLEAIHTDHQGEMTSLKEHFGAREEAFQKEIKALHTATEKLSK-ENESL---RSKLDHANKENS 570
Cdd:COG4913 773 --------ERIDALRARLNRAEEELERAMRAFNREWPAETADLDADLESLPEYLALLDRlEEDGLpeyEERFKELLNENS 844
|
250 260
....*....|....*....|....*
gi 1720414379 571 DV-IALWKSKLETAIASHQQAMEEL 594
Cdd:COG4913 845 IEfVADLLSKLRRAIREIKERIDPL 869
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
633-1095 |
1.72e-05 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 49.44 E-value: 1.72e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 633 KQDSERSAHAKEMETMQAKLMKIIKEKEDSLEAVKARLD------SAEDQHLVEMEDTLN-KLQEAEIKVKELEVLQAKY 705
Cdd:pfam10174 275 KQMEVYKSHSKFMKNKIDQLKQELSKKESELLALQTKLEtltnqnSDCKQHIEVLKESLTaKEQRAAILQTEVDALRLRL 354
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 706 TEQSEVIGNFTSQLSAVKEKLLDLDAlrkansegklELETLRQQLEGAEKQIKNLEternaesSKANSITKELQEKELVL 785
Cdd:pfam10174 355 EEKESFLNKKTKQLQDLTEEKSTLAG----------EIRDLKDMLDVKERKINVLQ-------KKIENLQEQLRDKDKQL 417
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 786 TGLQDSLNQVNQVKETLEKELQTLkekfastsEEAVSAQTRMQDTVNKLHQKEEQfnVLSSELEKLRENLTDMEAKF--- 862
Cdd:pfam10174 418 AGLKERVKSLQTDSSNTDTALTTL--------EEALSEKERIIERLKEQREREDR--ERLEELESLKKENKDLKEKVsal 487
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 863 -KEKDDREDQLVKAKEKLENDIAEIMKmsgdNSSQLTKMNDELRLKERSVEELQLKLTKANENASFLQKSIgEVTLKAEQ 941
Cdd:pfam10174 488 qPELTEKESSLIDLKEHASSLASSGLK----KDSKLKSLEIAVEQKKEECSKLENQLKKAHNAEEAVRTNP-EINDRIRL 562
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 942 SQQQAARKHEEEKKELEEKLLELEKKMETSyNQCQDLKAKYEKASSETKTKH-EEILQNLQKMLADTEDKLKAAQEanrd 1020
Cdd:pfam10174 563 LEQEVARYKEESGKAQAEVERLLGILREVE-NEKNDKDKKIAELESLTLRQMkEQNKKVANIKHGQQEMKKKGAQL---- 637
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1720414379 1021 lMQDMEELKTQADKAKAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNARLQNELDTLKENNLKTVEELNKSKE 1095
Cdd:pfam10174 638 -LEEARRREDNLADNSQQLQLEELMGALEKTRQELDATKARLSSTQQSLAEKDGHLTNLRAERRKQLEEILEMKQ 711
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
973-1336 |
2.20e-05 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 49.31 E-value: 2.20e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 973 NQCQDLKAKYEKASSETKTKHEEILQnLQKMLADTEDKLKAAQEANRdlmqdMEELKTQ-ADKAKAAQTAEDAMQIMEQM 1051
Cdd:COG5022 831 KLRETEEVEFSLKAEVLIQKFGRSLK-AKKRFSLLKKETIYLQSAQR-----VELAERQlQELKIDVKSISSLKLVNLEL 904
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1052 TKEKTETLASLEDTKQTNARLQNELDT-LKENNLKTVEELNKSKELlsVENQKMEEFKKEIETLKQAAAQKS---QQLSA 1127
Cdd:COG5022 905 ESEIIELKKSLSSDLIENLEFKTELIArLKKLLNNIDLEEGPSIEY--VKLPELNKLHEVESKLKETSEEYEdllKKSTI 982
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1128 LQEENVKLAEELGRTRDEVTSHQKleeERSVLNNQLLEMKKSLPSNTLRESEFRKD--ADEEKASLQKSISLTSALLtek 1205
Cdd:COG5022 983 LVREGNKANSELKNFKKELAELSK---QYGALQESTKQLKELPVEVAELQSASKIIssESTELSILKPLQKLKGLLL--- 1056
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1206 dAELEKLRNEVTVLRGENATAKSLHSVVQTLESDKVKL-ELKVKNLELqlkeNKRQLSSSSGNTDAQAEEDERAQESQQM 1284
Cdd:COG5022 1057 -LENNQLQARYKALKLRRENSLLDDKQLYQLESTENLLkTINVKDLEV----TNRNLVKPANVLQFIVAQMIKLNLLQEI 1131
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 1720414379 1285 IDFLNSVIVDLQRKNQDLKMKVEMMSEAALNGNGEDLNSYDSDDQEKQSKKK 1336
Cdd:COG5022 1132 SKFLSQLVNTLEPVFQKLSVLQLELDGLFWEANLEALPSPPPFAALSEKRLY 1183
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
819-1311 |
2.26e-05 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 48.97 E-value: 2.26e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 819 EAVSAQTRMQDTVNKLHQKEEQFNVLSSELEK----LRENLTDMEAKFKEKDDRedqlVKAKEKLENDIAEIMKMSGDNS 894
Cdd:pfam05557 3 ELIESKARLSQLQNEKKQMELEHKRARIELEKkasaLKRQLDRESDRNQELQKR----IRLLEKREAEAEEALREQAELN 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 895 SQLTKMNDELRLKERsveELQLKLTKANENASFLQKSIGEVTLKAEQSQQQAARKheeekkeleekllelEKKMETSYNQ 974
Cdd:pfam05557 79 RLKKKYLEALNKKLN---EKESQLADAREVISCLKNELSELRRQIQRAELELQST---------------NSELEELQER 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 975 CQDLKAKYEKASsetktKHEEILQNLQKMLADTEDKLKAAQEANRDLMQDMEELKTQadKAKAAQTAEdamqiMEQMTKE 1054
Cdd:pfam05557 141 LDLLKAKASEAE-----QLRQNLEKQQSSLAEAEQRIKELEFEIQSQEQDSEIVKNS--KSELARIPE-----LEKELER 208
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1055 KTETLASLEDTKQTNARLQNELDTLKeNNLKTVEELNKSKELLSVENQKMEEFKKEIETLKQAAAQK-------SQQLSA 1127
Cdd:pfam05557 209 LREHNKHLNENIENKLLLKEEVEDLK-RKLEREEKYREEAATLELEKEKLEQELQSWVKLAQDTGLNlrspedlSRRIEQ 287
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1128 LQEENVKLAEELG----RTRDEVTSHQKLEEERSVLNNQLLEMKKSLPsntlRESEFRKDADEEKASLQKSISLTSALLT 1203
Cdd:pfam05557 288 LQQREIVLKEENSsltsSARQLEKARRELEQELAQYLKKIEDLNKKLK----RHKALVRRLQRRVLLLTKERDGYRAILE 363
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1204 EKDAELeklrnevtvlrgeNATAKSLHSVVQTLESDKVKLELKVKNLELQLKENKRQLSSSSGNTDAQAEEDE----RAQ 1279
Cdd:pfam05557 364 SYDKEL-------------TMSNYSPQLLERIEEAEDMTQKMQAHNEEMEAQLSVAEEELGGYKQQAQTLERElqalRQQ 430
|
490 500 510
....*....|....*....|....*....|..
gi 1720414379 1280 ESQQMIDFLNSVIVDLQRKNQDLKMKVEMMSE 1311
Cdd:pfam05557 431 ESLADPSYSKEEVDSLRRKLETLELERQRLRE 462
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
386-837 |
2.27e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 49.00 E-value: 2.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 386 EIEQELALARDGHDQHvLELEAKMDQLRTMVEAADREKVELLNQLEEeKRKVEDLQFRVEEESITKGDLEvatvSEKSRI 465
Cdd:COG4717 75 ELEEELKEAEEKEEEY-AELQEELEELEEELEELEAELEELREELEK-LEKLLQLLPLYQELEALEAELA----ELPERL 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 466 MELEKdlalRAQEVAELRRRLESskppgdvdmslsLLQEISALQEKLEAIHTDHQGEMTSLKEHFGAREEAFQKEIKALH 545
Cdd:COG4717 149 EELEE----RLEELRELEEELEE------------LEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELE 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 546 TATEKLSKENESLRSKLD-------HANKENSDVIALWKSKLETAIASHQQAMEELKVSFSK---------GIGTDSAEF 609
Cdd:COG4717 213 EELEEAQEELEELEEELEqleneleAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTiagvlflvlGLLALLFLL 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 610 AELKTQIERLRLDYQHEIESLQSKQDSERSAHAKEMETMQAKLMKIIKEKEDSLEAVKARLDSAEDQH----LVEMEDTL 685
Cdd:COG4717 293 LAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEeelqLEELEQEI 372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 686 NKLQeAEIKVKELEVLQAKYTEQSEVIgNFTSQLSAVKEKLLDLDALRKANSEgKLELETLRQQLEGAEKQIKNLETERN 765
Cdd:COG4717 373 AALL-AEAGVEDEEELRAALEQAEEYQ-ELKEELEELEEQLEELLGELEELLE-ALDEEELEEELEELEEELEELEEELE 449
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1720414379 766 AESSKANSITKELQEKElvltgLQDSLNQVNQVKETLEKELQTLKEKFAStseeAVSAQTRMQDTVNKLHQK 837
Cdd:COG4717 450 ELREELAELEAELEQLE-----EDGELAELLQELEELKAELRELAEEWAA----LKLALELLEEAREEYREE 512
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
697-1259 |
2.50e-05 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 48.74 E-value: 2.50e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 697 ELEVLQAKYTEQSEVIGNFTSQLSavkekllDLDALRKANSEGKLELETLRQQLEGAE-------KQIKNLETERNAESS 769
Cdd:PRK01156 160 EINSLERNYDKLKDVIDMLRAEIS-------NIDYLEEKLKSSNLELENIKKQIADDEkshsitlKEIERLSIEYNNAMD 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 770 KANSITKELQEkelvLTGLQDSLNQVNQVKETLEKELQTLKEKFAS-----------TSEEAVSAQTRMQDTVNKLHQKE 838
Cdd:PRK01156 233 DYNNLKSALNE----LSSLEDMKNRYESEIKTAESDLSMELEKNNYykeleerhmkiINDPVYKNRNYINDYFKYKNDIE 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 839 EQFNVLS---SELEKLREN---LTDMEA---KFKEKDDREDQLVKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKER 909
Cdd:PRK01156 309 NKKQILSnidAEINKYHAIikkLSVLQKdynDYIKKKSRYDDLNNQILELEGYEMDYNSYLKSIESLKKKIEEYSKNIER 388
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 910 SVEELQLKLTKANENASFLQKSIGEVTLKAEQ-SQQQAARKHEEEKKELEEKLLELEKKMETSYNQCQDLKAKYEKASSE 988
Cdd:PRK01156 389 MSAFISEILKIQEIDPDAIKKELNEINVKLQDiSSKVSSLNQRIRALRENLDELSRNMEMLNGQSVCPVCGTTLGEEKSN 468
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 989 TKTKH-EEILQNLQKMLADTEDKLKAAQEANRDLMQDMEELktQADKAKAAQTAEDAMQIMEQMTKEKTETLASLEDTKQ 1067
Cdd:PRK01156 469 HIINHyNEKKSRLEEKIREIEIEVKDIDEKIVDLKKRKEYL--ESEEINKSINEYNKIESARADLEDIKIKINELKDKHD 546
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1068 TNARLQNELDTLKENNL--KTVEELNKSKELLSVenqkmeefkkEIETLKQAAAQKSQQLSALQEENVKLAEELGRTRDE 1145
Cdd:PRK01156 547 KYEEIKNRYKSLKLEDLdsKRTSWLNALAVISLI----------DIETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSY 616
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1146 VTSH-QKLEEERSVLNNQ--LLEMKKSLPSNTLRESEFRKDADEEKASLQKSISLTSALLTEKDAELEKLRNEvtvLRGE 1222
Cdd:PRK01156 617 IDKSiREIENEANNLNNKynEIQENKILIEKLRGKIDNYKKQIAEIDSIIPDLKEITSRINDIEDNLKKSRKA---LDDA 693
|
570 580 590
....*....|....*....|....*....|....*..
gi 1720414379 1223 NATAKSLHSVVQTLESDKVKLELKVKNLELQLKENKR 1259
Cdd:PRK01156 694 KANRARLESTIEILRTRINELSDRINDINETLESMKK 730
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
879-1274 |
3.34e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 48.53 E-value: 3.34e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 879 LENDIAEIMKMSGdnsSQLTKMNDELRlkerSVEELQLKLTKANENASFLQKSIGEVTLKAEQSQQQAARKHEEEKKELE 958
Cdd:TIGR02169 140 LQGDVTDFISMSP---VERRKIIDEIA----GVAEFDRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAER 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 959 ekllelekkmetsYNQCQDLKAKYE-KASSETKTKHEEILQNLQKMLADTE---DKLKAAQEANRDLMQDMEELKTQADK 1034
Cdd:TIGR02169 213 -------------YQALLKEKREYEgYELLKEKEALERQKEAIERQLASLEeelEKLTEEISELEKRLEEIEQLLEELNK 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1035 AKAAQTAEDAMQIMEQMTkektETLASLEDTKQTNARLQNELDTLKENNLKTVEELNKSKELLSVENQKMEEFKKEIETL 1114
Cdd:TIGR02169 280 KIKDLGEEEQLRVKEKIG----ELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKL 355
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1115 KQAAAQKSQQLSAL----QEENVKLAEELGRTRDEVTSHQKLEEERsvlnNQLLEMKKSLPSNTLRESEFRKDADEEKAS 1190
Cdd:TIGR02169 356 TEEYAELKEELEDLraelEEVDKEFAETRDELKDYREKLEKLKREI----NELKRELDRLQEELQRLSEELADLNAAIAG 431
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1191 LQKSISLTSALLTEKDAELEKLRNEVTVLRGENATAKSLHSVVQTlESDKVKLELKVKNLELQLKENKRQLSSSSGNTDA 1270
Cdd:TIGR02169 432 IEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKE-EYDRVEKELSKLQRELAEAEAQARASEERVRGGR 510
|
....
gi 1720414379 1271 QAEE 1274
Cdd:TIGR02169 511 AVEE 514
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
867-1081 |
3.49e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.84 E-value: 3.49e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 867 DREDQLVKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERSVEELQLKLTKANENASFLQKSIGEVTLK-AEQSQQQ 945
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEiAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 946 AARKHEEEKKELEEKLLELEKKMETSYNQCQDLKA----KYEKASSETKTKHEEILQNLQKMLADTEDKLKAAQEANRDL 1021
Cdd:COG4942 100 EAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAvrrlQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEAL 179
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1022 MQDMEELKTQADKAKAAQTaedamQIMEQMTKEKTETLASLEDTKQTNARLQNELDTLKE 1081
Cdd:COG4942 180 LAELEEERAALEALKAERQ-----KLLARLEKELAELAAELAELQQEAEELEALIARLEA 234
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
644-816 |
5.28e-05 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 46.46 E-value: 5.28e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 644 EMETMQAKLMKIIKEKEDSLEAVKARLDSAEDqhlvEMEDTLNKLQEAEIKVKELEVLQAKYTEQSEVIGNftsqlsaVK 723
Cdd:COG1579 21 RLEHRLKELPAELAELEDELAALEARLEAAKT----ELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRN-------NK 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 724 EklldLDALRKansegklELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEKELVLTGLQDSLNQVNQVKETLE 803
Cdd:COG1579 90 E----YEALQK-------EIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAEL 158
|
170
....*....|...
gi 1720414379 804 KELQTLKEKFAST 816
Cdd:COG1579 159 EELEAEREELAAK 171
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
464-909 |
6.57e-05 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 47.64 E-value: 6.57e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 464 RIMELEKDLALRAQEVAELRRRLesskppgdVDMSlSLLQEISALQEKLEAihtDHQgemtSLKEHFGAREEAFQkeika 543
Cdd:COG3096 286 RALELRRELFGARRQLAEEQYRL--------VEMA-RELEELSARESDLEQ---DYQ----AASDHLNLVQTALR----- 344
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 544 lhtATEKLSK---ENESLRSKLDhankENSDVIALWKSKLETAIASHQQAMEELKvsfskgigtdsaefaELKTQIErlr 620
Cdd:COG3096 345 ---QQEKIERyqeDLEELTERLE----EQEEVVEEAAEQLAEAEARLEAAEEEVD---------------SLKSQLA--- 399
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 621 lDYQHEIESLQSKQDSERSA-HAKEMETMQAKLMKI-IKEKEDSLEAVKARLDSAeDQHLVEMEDTLNKLQEAEI---KV 695
Cdd:COG3096 400 -DYQQALDVQQTRAIQYQQAvQALEKARALCGLPDLtPENAEDYLAAFRAKEQQA-TEEVLELEQKLSVADAARRqfeKA 477
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 696 KELEVLQAKYTEQSEVIGNFTSQLSAVKEklLDLDALRKANSEGKL-ELETLRQQLEGAEKQIKNLETERNAESSKANSI 774
Cdd:COG3096 478 YELVCKIAGEVERSQAWQTARELLRRYRS--QQALAQRLQQLRAQLaELEQRLRQQQNAERLLEEFCQRIGQQLDAAEEL 555
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 775 TKELQEKELVLTGLQDSLNQVNQVKETLEKELQTLKEKFASTSEEA---VSAQTRMQDTVNKLHQKEEQFNVLSSELEKL 851
Cdd:COG3096 556 EELLAELEAQLEELEEQAAEAVEQRSELRQQLEQLRARIKELAARApawLAAQDALERLREQSGEALADSQEVTAAMQQL 635
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 1720414379 852 RENLTDMEAKfkekddrEDQLVKAKEKLENDIAEIMKMSGDNSSQLtkmndeLRLKER 909
Cdd:COG3096 636 LEREREATVE-------RDELAARKQALESQIERLSQPGGAEDPRL------LALAER 680
|
|
| COG4487 |
COG4487 |
Uncharacterized conserved protein, contains DUF2130 domain [Function unknown]; |
976-1125 |
6.87e-05 |
|
Uncharacterized conserved protein, contains DUF2130 domain [Function unknown];
Pssm-ID: 443580 [Multi-domain] Cd Length: 425 Bit Score: 46.86 E-value: 6.87e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 976 QDLKAKYEKASSETKTKHEEILQNLQKMLADTEDK--LKAAQEANRDLMQDMEELKTQADKAKAAQTAEdamqiMEQMTK 1053
Cdd:COG4487 50 ELAEAKAKAQLQEQVAEKDAEIAELRARLEAEERKkaLAVAEEKEKELAALQEALAEKDAKLAELQAKE-----LELLKK 124
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1720414379 1054 EKTETLASLEDTKQTNARLQNELDTLKEN-NLKTVEELNKSKELLSVENQK-MEEFKKEIETLKQAAAQKSQQL 1125
Cdd:COG4487 125 ERELEDAKREAELTVEKERDEELDELKEKlKKEEEEKQLAEKSLKVAEYEKqLKDMQEQIEELKRKKEQGSTQL 198
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
404-1106 |
6.94e-05 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 47.73 E-value: 6.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 404 ELEAKMDQLRTMVEAADRekvelLNQLEEEKRKVEDLQFRVEEESITKgDLEVATVSEKSRIMELEKDLALRAQEVAELR 483
Cdd:TIGR00606 455 ELKFVIKELQQLEGSSDR-----ILELDQELRKAERELSKAEKNSLTE-TLKKEVKSLQNEKADLDRKLRKLDQEMEQLN 528
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 484 RRLESSKppgdvdMSLSLLQEISALQEKLEAIHTDHQGEMTSLKEHFGAReeafqkeiKALHTATEKLSKENESLRSKLD 563
Cdd:TIGR00606 529 HHTTTRT------QMEMLTKDKMDKDEQIRKIKSRHSDELTSLLGYFPNK--------KQLEDWLHSKSKEINQTRDRLA 594
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 564 HANKENSDVialwkSKLETAIASHQQAMEELKVSFSKGIgTDSAEFAELKTQIERLRLDYqheieslqsKQDSERSAHAK 643
Cdd:TIGR00606 595 KLNKELASL-----EQNKNHINNELESKEEQLSSYEDKL-FDVCGSQDEESDLERLKEEI---------EKSSKQRAMLA 659
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 644 EMETMQAKLMKIIKEKEDSLEAVKARLDSAEDQHLVEMEDTLNKLQEAEIKVKELE-VLQAKYTEQSEVIGNFTSQLSAV 722
Cdd:TIGR00606 660 GATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEFISDLQSKLRLAPDKLKSTEsELKKKEKRRDEMLGLAPGRQSII 739
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 723 KEKLLDLDALRKANSEGKLELETLRQQLEGAEKQIKNLETERNAesskansiTKELQEKELVLTGLQDSLNQVNQVKETL 802
Cdd:TIGR00606 740 DLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEES--------AKVCLTDVTIMERFQMELKDVERKIAQQ 811
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 803 EKELQtlkekfastseeAVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRenltdmeakfKEKDDREDQLVKAKEKLEND 882
Cdd:TIGR00606 812 AAKLQ------------GSDLDRTVQQVNQEKQEKQHELDTVVSKIELNR----------KLIQDQQEQIQHLKSKTNEL 869
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 883 IAEIMKMsGDNSSQLTKMNDELRLKERSVEELQLKLTKANENASFLQKSIGevtlKAEQSQQQAARKHEEEKKELEEKLL 962
Cdd:TIGR00606 870 KSEKLQI-GTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDSPLETFLE----KDQQEKEELISSKETSNKKAQDKVN 944
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 963 ELEKKMETSYNQCQDLKAKYEKASSETKTKHEEILQNLQKMLADTEDKLKAAQEANRDLMQDMEELKTQADKAKAAQTae 1042
Cdd:TIGR00606 945 DIKEKVKNIHGYMKDIENKIQDGKDDYLKQKETELNTVNAQLEECEKHQEKINEDMRLMRQDIDTQKIQERWLQDNLT-- 1022
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1720414379 1043 daMQIMEQMTKEKTETLAS---------LEDTKQTNARLQNELDTLKENNLKTVEELNKSKELLSVENQKMEE 1106
Cdd:TIGR00606 1023 --LRKRENELKEVEEELKQhlkemgqmqVLQMKQEHQKLEENIDLIKRNHVLALGRQKGYEKEIKHFKKELRE 1093
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
467-1170 |
7.42e-05 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 47.51 E-value: 7.42e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 467 ELEKDLALRAQEVAELRRRLESSKPPGDVDMSLSLlqEISALQEKLEA-------IHTDHQGEMTSLKEHFGAREEAfQK 539
Cdd:pfam10174 40 ELKKERALRKEEAARISVLKEQYRVTQEENQHLQL--TIQALQDELRAqrdlnqlLQQDFTTSPVDGEDKFSTPELT-EE 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 540 EIKALHTATEKLSKENESLRSKLDHankensdvialwkskLETAIASHQQAMEelkvsfskgigtdsAEFAELKTQIERL 619
Cdd:pfam10174 117 NFRRLQSEHERQAKELFLLRKTLEE---------------MELRIETQKQTLG--------------ARDESIKKLLEML 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 620 RLDYQheiESLQSKQDSERSAHAKEMETMQAKLMKIIKEKEdsleavkarldsAEDQHLVEMEDTLNKLQEAEIKVKELE 699
Cdd:pfam10174 168 QSKGL---PKKSGEEDWERTRRIAEAEMQLGHLEVLLDQKE------------KENIHLREELHRRNQLQPDPAKTKALQ 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 700 vlqakyteqsEVIGNFTSQLSAVKEKLLDL-DALRKANSEGKLELETLRQQLegaeKQIKNLETERNAESSKANSITKEL 778
Cdd:pfam10174 233 ----------TVIEMKDTKISSLERNIRDLeDEVQMLKTNGLLHTEDREEEI----KQMEVYKSHSKFMKNKIDQLKQEL 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 779 QEKELVLTGLQDSLNQVNQVKETLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQKE--------------EQFNVL 844
Cdd:pfam10174 299 SKKESELLALQTKLETLTNQNSDCKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKEsflnkktkqlqdltEEKSTL 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 845 SSELEKLRENLTDMEAKF----KEKDDREDQLvKAKEK----LENDIAEIMKMSGDNSSQLTKMNDELRLKERSVEELQL 916
Cdd:pfam10174 379 AGEIRDLKDMLDVKERKInvlqKKIENLQEQL-RDKDKqlagLKERVKSLQTDSSNTDTALTTLEEALSEKERIIERLKE 457
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 917 KltKANENASFLQKSIGEVTLKAEQSQQQAARKHEEEKKELEEKLLELEKKMETSYNQCQDLKAKYEKASSETKTKHEEI 996
Cdd:pfam10174 458 Q--REREDRERLEELESLKKENKDLKEKVSALQPELTEKESSLIDLKEHASSLASSGLKKDSKLKSLEIAVEQKKEECSK 535
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 997 LQNLQKMLADTEDKLKAAQEANRDLMQDMEELKTQADKAKAAQT-AEDAMQIMEQMTKEKT---ETLASLEDTKQTNARL 1072
Cdd:pfam10174 536 LENQLKKAHNAEEAVRTNPEINDRIRLLEQEVARYKEESGKAQAeVERLLGILREVENEKNdkdKKIAELESLTLRQMKE 615
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1073 QNeldtLKENNLKTVEELNKSKELlsvenQKMEEFKKEIETLKQAAAQksQQLSALQEENVKLAEELGRTRDEVTS-HQK 1151
Cdd:pfam10174 616 QN----KKVANIKHGQQEMKKKGA-----QLLEEARRREDNLADNSQQ--LQLEELMGALEKTRQELDATKARLSStQQS 684
|
730
....*....|....*....
gi 1720414379 1152 LEEERSVLNNQLLEMKKSL 1170
Cdd:pfam10174 685 LAEKDGHLTNLRAERRKQL 703
|
|
| PRK04778 |
PRK04778 |
septation ring formation regulator EzrA; Provisional |
381-763 |
7.91e-05 |
|
septation ring formation regulator EzrA; Provisional
Pssm-ID: 179877 [Multi-domain] Cd Length: 569 Bit Score: 47.14 E-value: 7.91e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 381 TSHVGEIEQELALARDGHDQ-HVLELEAKMDQLRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEesiTKGDLEVA-- 457
Cdd:PRK04778 78 TNSLPDIEEQLFEAEELNDKfRFRKAKHEINEIESLLDLIEEDIEQILEELQELLESEEKNREEVEQ---LKDLYRELrk 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 458 TVSEKS-----RIMELEKDLALRAQEVAELRRRLESskppGDV----DMSLSLLQEISALQEKLEAI-------HTDHQG 521
Cdd:PRK04778 155 SLLANRfsfgpALDELEKQLENLEEEFSQFVELTES----GDYvearEILDQLEEELAALEQIMEEIpellkelQTELPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 522 EMTSLK--------EHFGAREEAFQKEIKALHTATEKLSKENESLrsKLDHANKENSDV---IALWKSKLETAIASHQQA 590
Cdd:PRK04778 231 QLQELKagyrelveEGYHLDHLDIEKEIQDLKEQIDENLALLEEL--DLDEAEEKNEEIqerIDQLYDILEREVKARKYV 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 591 MEELKVsFSKGIGTDSAEFAELKTQIERLRLDYQ---HEIESLQSkqdsersaHAKEMETMQAKLMKIIK---------- 657
Cdd:PRK04778 309 EKNSDT-LPDFLEHAKEQNKELKEEIDRVKQSYTlneSELESVRQ--------LEKQLESLEKQYDEITEriaeqeiays 379
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 658 EKEDSLEAVKARLDSAEDQHlVEMEDTLNKLQEAEIKVKE-LEVLQAK------YTEQSEVIGNFTSQLSAVKEKLLDLD 730
Cdd:PRK04778 380 ELQEELEEILKQLEEIEKEQ-EKLSEMLQGLRKDELEAREkLERYRNKlheikrYLEKSNLPGLPEDYLEMFFEVSDEIE 458
|
410 420 430
....*....|....*....|....*....|...
gi 1720414379 731 ALRKANSEGKLELETLRQQLEGAEKQIKNLETE 763
Cdd:PRK04778 459 ALAEELEEKPINMEAVNRLLEEATEDVETLEEE 491
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
1064-1340 |
1.12e-04 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 46.99 E-value: 1.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1064 DTKQTNARLQNELDTLKENNLKTVEELNKSKELLSvenqkmEEFKKEIETLKQAAAQKSQQLSALQEENVKLAE-ELGRT 1142
Cdd:COG5022 814 SYLACIIKLQKTIKREKKLRETEEVEFSLKAEVLI------QKFGRSLKAKKRFSLLKKETIYLQSAQRVELAErQLQEL 887
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1143 RDEVTSHQKLEEERSVLNNQLLEMKKSLPSNTLRESEFRKDADEEKASLQKSISLTSALLTE--KDAELEKLRNEVTVLR 1220
Cdd:COG5022 888 KIDVKSISSLKLVNLELESEIIELKKSLSSDLIENLEFKTELIARLKKLLNNIDLEEGPSIEyvKLPELNKLHEVESKLK 967
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1221 GENATAKSLHSVVQTLESDKVKLELKVKNLELQLKENKRQLSSSSGNTDAQAEEDERAQESQQMIDFLNSVIVDLQRKNQ 1300
Cdd:COG5022 968 ETSEEYEDLLKKSTILVREGNKANSELKNFKKELAELSKQYGALQESTKQLKELPVEVAELQSASKIISSESTELSILKP 1047
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 1720414379 1301 DLKMKVEMMSEA-ALNGNGEDL-----NSYDSDDQEKQSKKKPRLF 1340
Cdd:COG5022 1048 LQKLKGLLLLENnQLQARYKALklrreNSLLDDKQLYQLESTENLL 1093
|
|
| CLIP1_ZNF |
pfam16641 |
CLIP1 zinc knuckle; This zinc knuckle domain is found tandemly repeated at the C-terminal of ... |
1338-1355 |
1.22e-04 |
|
CLIP1 zinc knuckle; This zinc knuckle domain is found tandemly repeated at the C-terminal of the cytoplasmic linker protein CLIP1 (CLIP170). It forms a complex with the CAP-Gly domain of Dynactin.
Pssm-ID: 465212 Cd Length: 17 Bit Score: 40.14 E-value: 1.22e-04
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
800-1230 |
1.25e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 46.68 E-value: 1.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 800 ETLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKL 879
Cdd:COG4717 49 ERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLL 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 880 ENDIaeimkmsgdnssQLTKMNDELRLKERSVEELQLKLTKANEnasfLQKSIGEVTLKAEQSQQQAARKHEEEKKELEE 959
Cdd:COG4717 129 PLYQ------------ELEALEAELAELPERLEELEERLEELRE----LEEELEELEAELAELQEELEELLEQLSLATEE 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 960 KLLELEKKMETSYNQCQDLKAKYEKASSETKTKHEEILQNLQKML-ADTEDKLKAAQEANRD-------LMQDMEELKTQ 1031
Cdd:COG4717 193 ELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEaAALEERLKEARLLLLIaaallalLGLGGSLLSLI 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1032 ADKAKAAQTAEDAMQIMEQMT-KEKTETLASLEDTKQTNAR-------LQNELDTLKENNLKTVEELNKSKELLSVENQK 1103
Cdd:COG4717 273 LTIAGVLFLVLGLLALLFLLLaREKASLGKEAEELQALPALeeleeeeLEELLAALGLPPDLSPEELLELLDRIEELQEL 352
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1104 MEEFKKEIETLKQAAAQKSQQlSALQEENVKLAEELGRTRDEVTSHQKLEEERSVLNNQLLEMKKSLpsNTLRESEFRKD 1183
Cdd:COG4717 353 LREAEELEEELQLEELEQEIA-ALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGEL--EELLEALDEEE 429
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 1720414379 1184 ADEEKASLQKSISLTSALLTEKDAELEKLRNEVTVLRGENATAKSLH 1230
Cdd:COG4717 430 LEEELEELEEELEELEEELEELREELAELEAELEQLEEDGELAELLQ 476
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
607-1054 |
1.56e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 46.30 E-value: 1.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 607 AEFAELKTQIERLRldyqHEIESLQSKQDS-ERSAHAKEMETMQAKLMKIIKEKEDSLEAVKARLDSAEdQHLVEMEDTL 685
Cdd:COG4717 88 EEYAELQEELEELE----EELEELEAELEElREELEKLEKLLQLLPLYQELEALEAELAELPERLEELE-ERLEELRELE 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 686 NKLQEAEikvKELEVLQAKYTEQSEVIGNftSQLSAVKEKLLDLDALRKANSEGKLELETLRQQLEGAEKQIKNLETERN 765
Cdd:COG4717 163 EELEELE---AELAELQEELEELLEQLSL--ATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELE 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 766 AEsskanSITKELQEKELVLTGLQDSLNQVNQVKETLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQKEEQfnvls 845
Cdd:COG4717 238 AA-----ALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEEL----- 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 846 sELEKLRENLTDMEAKfkekddredQLVKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERSVEELQLKLTKANENA 925
Cdd:COG4717 308 -QALPALEELEEEELE---------ELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEIAALLA 377
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 926 SFLQKSIGEVTLKAEQSQQQAARKHEEEKKELEEKLLELEKKMETSYNQCQDLKAKYEKASSETKTKHEEiLQNLQKMLA 1005
Cdd:COG4717 378 EAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEEELEEELEELEEELEELEEE-LEELREELA 456
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 1720414379 1006 DTEDKLKAAQEANR--DLMQDMEELKTQ-ADKAKAAQTAEDAMQIMEQMTKE 1054
Cdd:COG4717 457 ELEAELEQLEEDGElaELLQELEELKAElRELAEEWAALKLALELLEEAREE 508
|
|
| Golgin_A5 |
pfam09787 |
Golgin subfamily A member 5; Members of this family of proteins are involved in maintaining ... |
987-1230 |
1.59e-04 |
|
Golgin subfamily A member 5; Members of this family of proteins are involved in maintaining Golgi structure. They stimulate the formation of Golgi stacks and ribbons, and are involved in intra-Golgi retrograde transport. Two main interactions have been characterized: one with RAB1A that has been activated by GTP-binding and another with isoform CASP of CUTL1.
Pssm-ID: 462900 [Multi-domain] Cd Length: 305 Bit Score: 45.52 E-value: 1.59e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 987 SETKTKHEEILQNLQKMLAD-TEDKLKAAQEANRDLMQDMEELKTQADkakaaQTAEDAMQIMEQMTKEKTEtLASLEdt 1065
Cdd:pfam09787 10 ADYKQKAARILQSKEKLIASlKEGSGVEGLDSSTALTLELEELRQERD-----LLREEIQKLRGQIQQLRTE-LQELE-- 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1066 kqtnARLQNELDTLKEnnlktveELNKSKELLSVENQKMEEFKKEietlkqaaaqksqqLSALQEENVKLAEELGRTRDE 1145
Cdd:pfam09787 82 ----AQQQEEAESSRE-------QLQELEEQLATERSARREAEAE--------------LERLQEELRYLEEELRRSKAT 136
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1146 -VTSHQKLEEERSVLNNQLleMKKSLPSNTLRESEFRKDADEEkASLQKSISLtSALLTEKDA---ELEKLRNEVTVLRG 1221
Cdd:pfam09787 137 lQSRIKDREAEIEKLRNQL--TSKSQSSSSQSELENRLHQLTE-TLIQKQTML-EALSTEKNSlvlQLERMEQQIKELQG 212
|
....*....
gi 1720414379 1222 ENATAKSLH 1230
Cdd:pfam09787 213 EGSNGTSIN 221
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
972-1148 |
1.62e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 45.59 E-value: 1.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 972 YNQCQDLKAKYEKASSETKTKHEEIlQNLQKMLADTEDKLKAAQEANRDLMQDMEELKTQADK------AKAAQTAEDAM 1045
Cdd:COG3883 43 QAELEELNEEYNELQAELEALQAEI-DKLQAEIAEAEAEIEERREELGERARALYRSGGSVSYldvllgSESFSDFLDRL 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1046 QIMEQMTKEKTETLASLEDTKQTNARLQNELDTLKENNLKTVEELNKSKELLsveNQKMEEFKKEIETLKQAAAQKSQQL 1125
Cdd:COG3883 122 SALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAEL---EAQQAEQEALLAQLSAEEAAAEAQL 198
|
170 180
....*....|....*....|...
gi 1720414379 1126 SALQEENVKLAEELGRTRDEVTS 1148
Cdd:COG3883 199 AELEAELAAAEAAAAAAAAAAAA 221
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
997-1221 |
1.66e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 46.45 E-value: 1.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 997 LQNLQKMLADTEDKLKAAQEAnRDLMQDMEELKTQADKA---KAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNARLQ 1073
Cdd:COG4913 237 LERAHEALEDAREQIELLEPI-RELAERYAAARERLAELeylRAALRLWFAQRRLELLEAELEELRAELARLEAELERLE 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1074 NELDTLKEnnlkTVEELnkSKELLSVENQKMEEFKKEIETLKQAAAQKSQQLSALQEenvkLAEELGrtrdevtshQKLE 1153
Cdd:COG4913 316 ARLDALRE----ELDEL--EAQIRGNGGDRLEQLEREIERLERELEERERRRARLEA----LLAALG---------LPLP 376
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1720414379 1154 EERSVLNNQLLEMKkslpsntlresEFRKDADEEKASLQKSISLTSALLTEKDAELEKLRNEVTVLRG 1221
Cdd:COG4913 377 ASAEEFAALRAEAA-----------ALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLER 433
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
800-918 |
1.98e-04 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 46.00 E-value: 1.98e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 800 ETLEKELQTLKEKfaSTSEEAVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDDR----EDQLVKA 875
Cdd:COG2433 376 LSIEEALEELIEK--ELPEEEPEAEREKEHEERELTEEEEEIRRLEEQVERLEAEVEELEAELEEKDERierlERELSEA 453
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1720414379 876 KEKLENDI---AEIMKMSGDNsSQLTKmndELRLKERSVEELQLKL 918
Cdd:COG2433 454 RSEERREIrkdREISRLDREI-ERLER---ELEEERERIEELKRKL 495
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
961-1277 |
2.48e-04 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 45.73 E-value: 2.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 961 LLELEKKMETSYNQCQDLKAKYEKASSETKTKHEEILQNLQKMLADTEDKLKAAQEANRDLMQDMEELKTQADKAKAAQT 1040
Cdd:pfam02463 192 LEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVL 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1041 AEDAMQIMEQmtKEKTETLASLEDTKQTNARLQNELDTLKENNLKTVEELNKSKELLSVENQKMEEFKKEIETLKQAAAQ 1120
Cdd:pfam02463 272 KENKEEEKEK--KLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEKELKELEI 349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1121 KSQQLSALQEENVKLAEELGRTRDEVTSHQKLEEERSVLNNQLLEMKKSLPSNTLRESEFRKDADEEKASLQKSISLTSA 1200
Cdd:pfam02463 350 KREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEEL 429
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1720414379 1201 LLTEKDAELEKLRNEVTVLRGENATAKSLHSVVQTLESDKVKLELKVKNLELQLKENKRQLSSSSGNTDAQAEEDER 1277
Cdd:pfam02463 430 EILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKAR 506
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
748-1181 |
2.94e-04 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 45.45 E-value: 2.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 748 QQLEGAEKQIKNLETErNAESSKANSITKELQEKELVLT-GLQDSLNQVNQVKETLEKELQTLKEKfaSTSEEAVSAQTR 826
Cdd:COG5022 875 QRVELAERQLQELKID-VKSISSLKLVNLELESEIIELKkSLSSDLIENLEFKTELIARLKKLLNN--IDLEEGPSIEYV 951
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 827 MQDTVNKLHQKEeqfnvlsSELEKLRENLTDMeakFKEKDDREDQLVKAKEKLENDIAEIMKMSGDNSSqLTKMNDELRL 906
Cdd:COG5022 952 KLPELNKLHEVE-------SKLKETSEEYEDL---LKKSTILVREGNKANSELKNFKKELAELSKQYGA-LQESTKQLKE 1020
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 907 KERSVEELQLKLTKANENASFL------QKSIGEVTLKAEQSQQQAarKHEEEKKELEEKLLELEKKMETSYNQCQDLKA 980
Cdd:COG5022 1021 LPVEVAELQSASKIISSESTELsilkplQKLKGLLLLENNQLQARY--KALKLRRENSLLDDKQLYQLESTENLLKTINV 1098
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 981 KYEKASSETKTKHEEILQNLqkmladtedklkAAQEANRDLMQDMEELKTQadkakAAQTAEDAMQIME--QMTKEKTET 1058
Cdd:COG5022 1099 KDLEVTNRNLVKPANVLQFI------------VAQMIKLNLLQEISKFLSQ-----LVNTLEPVFQKLSvlQLELDGLFW 1161
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1059 LASLEDTKQTNARLQNELDTLKENNLKTVEELNKSKELLSVENQKMEEFKKEIETL-KQAAAQKSQQLSALQEENVKLAE 1137
Cdd:COG5022 1162 EANLEALPSPPPFAALSEKRLYQSALYDEKSKLSSSEVNDLKNELIALFSKIFSGWpRGDKLKKLISEGWVPTEYSTSLK 1241
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 1720414379 1138 ELGRTRDEVTSHQKL--EEERSVLNNQLLEMKKSLPSNTLRESEFR 1181
Cdd:COG5022 1242 GFNNLNKKFDTPASMsnEKLLSLLNSIDNLLSSYKLEEEVLPATIN 1287
|
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
1081-1336 |
3.10e-04 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 45.33 E-value: 3.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1081 ENNLKTVEELNKSKELLSVENQKMEEFKKEIETLKQAAAQKSQQLSA-LQEENVKLAEELGRTRDEVTSHQKLEEERSVL 1159
Cdd:COG5185 232 EEALKGFQDPESELEDLAQTSDKLEKLVEQNTDLRLEKLGENAESSKrLNENANNLIKQFENTKEKIAEYTKSIDIKKAT 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1160 NNQLLEMKKSLPSNTL--RESEFRKDADEEKASLQKSISLTSALLTEKDAELEKLRNEVTVLRGEnataKSLHSVVQTLE 1237
Cdd:COG5185 312 ESLEEQLAAAEAEQELeeSKRETETGIQNLTAEIEQGQESLTENLEAIKEEIENIVGEVELSKSS----EELDSFKDTIE 387
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1238 SDKVKLELKVKNLELQLKENKRQLSSSSGNTDAQAEEDERAqesqqmIDFLNSVIVDLQRKNQDL-KMKVEMMSEAALNG 1316
Cdd:COG5185 388 STKESLDEIPQNQRGYAQEILATLEDTLKAADRQIEELQRQ------IEQATSSNEEVSKLLNELiSELNKVMREADEES 461
|
250 260
....*....|....*....|
gi 1720414379 1317 NGEDLNSYDSDDQEKQSKKK 1336
Cdd:COG5185 462 QSRLEEAYDEINRSVRSKKE 481
|
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
535-859 |
3.32e-04 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 44.95 E-value: 3.32e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 535 EAFQKEIKALHTATEKLSKENESLRSKLDHANKENSDVIALWKSKLETAIASHQQAMEELKVSFSKGIGTDSAE----FA 610
Cdd:COG5185 242 ESELEDLAQTSDKLEKLVEQNTDLRLEKLGENAESSKRLNENANNLIKQFENTKEKIAEYTKSIDIKKATESLEeqlaAA 321
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 611 ELKTQIERLRLDYQHEIESLQSKQDSERSAHAKEMETMQAKLMKIIKEKEdsLEAVKARLDSAEDQHLVEMEDTLNKLQE 690
Cdd:COG5185 322 EAEQELEESKRETETGIQNLTAEIEQGQESLTENLEAIKEEIENIVGEVE--LSKSSEELDSFKDTIESTKESLDEIPQN 399
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 691 AEIKVKE-LEVLQAKYTEQSEVIGNFTSQLSAVKEKLLDLDALRKANSEGKLELETLRQQLEGAEKQIKNLETERNAESS 769
Cdd:COG5185 400 QRGYAQEiLATLEDTLKAADRQIEELQRQIEQATSSNEEVSKLLNELISELNKVMREADEESQSRLEEAYDEINRSVRSK 479
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 770 KANSITKELQEKELVLTGLQDSLNQVNQVKETLEKELQTLKEKFASTSEEAVSAQ----TRMQDTVNKLHQKEEQFNVLS 845
Cdd:COG5185 480 KEDLNEELTQIESRVSTLKATLEKLRAKLERQLEGVRSKLDQVAESLKDFMRARGyahiLALENLIPASELIQASNAKTD 559
|
330
....*....|....
gi 1720414379 846 SELEKLRENLTDME 859
Cdd:COG5185 560 GQAANLRTAVIDEL 573
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
331-683 |
3.71e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 45.06 E-value: 3.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 331 RTGLLTETSSRYARKISGTTALQEA---LKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELAlardghdqhvlELEA 407
Cdd:TIGR02169 690 LSSLQSELRRIENRLDELSQELSDAsrkIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIE-----------NVKS 758
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 408 KMDQLRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLEVATVSekSRIMELEKDLALRaqevaELRRRLE 487
Cdd:TIGR02169 759 ELKELEARIEELEEDLHKLEEALNDLEARLSHSRIPEIQAELSKLEEEVSRIE--ARLREIEQKLNRL-----TLEKEYL 831
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 488 SSKPPGDVDMSLSLLQEISALQEKLEAIHTDhqgemtslKEHFGAREEAFQKEIKALHTATEKLSKENESLRSKLDHANK 567
Cdd:TIGR02169 832 EKEIQELQEQRIDLKEQIKSIEKEIENLNGK--------KEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELER 903
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 568 EnsdvialwKSKLETAIASHQQAMEELKVsfskgigTDSAEFAELKtQIERLRLDYQHEIESLQSKQD--SERSAHAKEM 645
Cdd:TIGR02169 904 K--------IEELEAQIEKKRKRLSELKA-------KLEALEEELS-EIEDPKGEDEEIPEEELSLEDvqAELQRVEEEI 967
|
330 340 350
....*....|....*....|....*....|....*...
gi 1720414379 646 ETMQAKLMKIIKEKEDsleaVKARLDSAEDQHLVEMED 683
Cdd:TIGR02169 968 RALEPVNMLAIQEYEE----VLKRLDELKEKRAKLEEE 1001
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
354-905 |
3.87e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 44.96 E-value: 3.87e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 354 EALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALArdgHDQHVLELEAKMDQLRTMVEAADREKVELLNQLEEE 433
Cdd:TIGR00618 389 TTLTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHA---KKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESA 465
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 434 KRKVEDLQFRVEEESITKGDLEVATVSEKSRIMELEKDLALRAQEVAELRRRLESSKPPGDVDMSLSLLQEISALQEKLE 513
Cdd:TIGR00618 466 QSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNPGPLTRRMQRGEQTYAQLETSEE 545
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 514 aiHTDHQGemTSLKEHFGAREEAFQKEIKALHTATEKLSKENESLRSKLDHANKENSDVIALWKSKLETAIASHQQamee 593
Cdd:TIGR00618 546 --DVYHQL--TSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHAL---- 617
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 594 lkvsfskgigtdsaefaELKTQIErlrLDYQHEIESLQSKQDSErsahAKEMETMQAKLMKIIKEKEdsleavkarldsa 673
Cdd:TIGR00618 618 -----------------LRKLQPE---QDLQDVRLHLQQCSQEL----ALKLTALHALQLTLTQERV------------- 660
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 674 EDQHLVEMEDTLNKLQEAEIKVKELEVLQAKYTEQSEVIGNFTSQLSAVKEKLLDLDALRKANSEGKLEL-ETLRQQLEG 752
Cdd:TIGR00618 661 REHALSIRVLPKELLASRQLALQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEIENASSSLgSDLAAREDA 740
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 753 AEKQIKNLETERNAESSKANSITKELQEKELVLTGLQDSLNQVNQVKETLEKELQT----LKEKFASTSEEAVSAQTRMQ 828
Cdd:TIGR00618 741 LNQSLKELMHQARTVLKARTEAHFNNNEEVTAALQTGAELSHLAAEIQFFNRLREEdthlLKTLEAEIGQEIPSDEDILN 820
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1720414379 829 DTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLendIAEIMKMSGDNSSQLTKMNDELR 905
Cdd:TIGR00618 821 LQCETLVQEEEQFLSRLEEKSATLGEITHQLLKYEECSKQLAQLTQEQAKI---IQLSDKLNGINQIKIQFDGDALI 894
|
|
| CCDC22 |
pfam05667 |
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 ... |
638-883 |
3.91e-04 |
|
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 (CCDC22) is involved in regulation of NF-kappa-B signalling; the function may involve association with COMMD8 and a CUL1-dependent E3 ubiquitin ligase complex. It is part of the OMMD/CCDC22/CCDC93 (CCC) complex, which interacts with the multisubunit WASH complex required for endosomal deposition of F-actin and cargo trafficking in conjunction with the retromer. This entry also includes CCDC22 homologs from animals and plants.
Pssm-ID: 461708 [Multi-domain] Cd Length: 600 Bit Score: 45.02 E-value: 3.91e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 638 RSAHAKEMETMQAKLMKIIKEKEDSLEAVKARLDSAEDQHLVEMEDTLNKLQEAEIKVKELEVLQAKYTEQSEVIGNFTS 717
Cdd:pfam05667 231 LASRLTPEEYRKRKRTKLLKRIAEQLRSAALAGTEATSGASRSAQDLAELLSSFSGSSTTDTGLTKGSRFTHTEKLQFTN 310
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 718 QLSAVKEKLL----DLDALRKANSEgklELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEKELVLTGLQDSLN 793
Cdd:pfam05667 311 EAPAATSSPPtkveTEEELQQQREE---ELEELQEQLEDLESSIQELEKEIKKLESSIKQVEEELEELKEQNEELEKQYK 387
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 794 ------------QVNQVKetLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQ----KEEQFNVLSSELEKLRENLTD 857
Cdd:pfam05667 388 vkkktldllpdaEENIAK--LQALVDASAQRLVELAGQWEKHRVPLIEEYRALKEaksnKEDESQRKLEEIKELREKIKE 465
|
250 260
....*....|....*....|....*.
gi 1720414379 858 MEAKFKEKDDREDQLVKAKEKLENDI 883
Cdd:pfam05667 466 VAEEAKQKEELYKQLVAEYERLPKDV 491
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
353-1243 |
4.41e-04 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 45.04 E-value: 4.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 353 QEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELalardghdqhvleleakmdqlrtmveaaDREKVELLNQLEE 432
Cdd:TIGR00606 300 DEQLNDLYHNHQRTVREKERELVDCQRELEKLNKERRLL----------------------------NQEKTELLVEQGR 351
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 433 EKrkvedLQFRVEEESITKGDLEVATVSEKSRIMELEKDLALRAQ--EVAELRRRLESSKPPGDVDMSLSLLQEISALQE 510
Cdd:TIGR00606 352 LQ-----LQADRHQEHIRARDSLIQSLATRLELDGFERGPFSERQikNFHTLVIERQEDEAKTAAQLCADLQSKERLKQE 426
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 511 KLEAIHTDHQGEMTSL---KEHFGAREEAFQKEIKALHTAT---EKLSKENESLRSKLDHANKENSDVIALWKSKLETAI 584
Cdd:TIGR00606 427 QADEIRDEKKGLGRTIelkKEILEKKQEELKFVIKELQQLEgssDRILELDQELRKAERELSKAEKNSLTETLKKEVKSL 506
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 585 ASHQQAMEELKVSFSKGIGTDSAEfAELKTQIERLRLDYQHEIESLQSKqdseRSAHAKEMeTMQAKLMKIIKEKEDSLE 664
Cdd:TIGR00606 507 QNEKADLDRKLRKLDQEMEQLNHH-TTTRTQMEMLTKDKMDKDEQIRKI----KSRHSDEL-TSLLGYFPNKKQLEDWLH 580
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 665 AVKARLDsaedqhlvEMEDTLNKLQeaeIKVKELEVLQAKYTEQSEvigNFTSQLSAVKEKLLDLDALRKANSegklELE 744
Cdd:TIGR00606 581 SKSKEIN--------QTRDRLAKLN---KELASLEQNKNHINNELE---SKEEQLSSYEDKLFDVCGSQDEES----DLE 642
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 745 TLRQQLEGAEKQIKNLETERNAESSKANSITKELQEKELVLTGLQDSLNQVNQVKETLEKELQTLKEKFASTSEEAVSAQ 824
Cdd:TIGR00606 643 RLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEFISDLQSKLRLAPDKLKSTESELKKKE 722
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 825 TRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKF-KEKDDREDQlvkakEKLENDIAEIMKMSGDNSSQLTKMnde 903
Cdd:TIGR00606 723 KRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIqRLKNDIEEQ-----ETLLGTIMPEEESAKVCLTDVTIM--- 794
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 904 lrlkERSVEELQLKLTKANENASFLQKSIGEVTLkaeQSQQQAARKHEEEKKELEEKLLELEKKMETSYNQCQDLKAKYE 983
Cdd:TIGR00606 795 ----ERFQMELKDVERKIAQQAAKLQGSDLDRTV---QQVNQEKQEKQHELDTVVSKIELNRKLIQDQQEQIQHLKSKTN 867
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 984 KASSEtKTKHEEILQNLQKMLADTEDKLKAAQEANRDLMQDMEELKTQADKAKAAQTAEDAMQIMEQMTKEKTETLASLE 1063
Cdd:TIGR00606 868 ELKSE-KLQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQEKEELISSKETSNKKAQDKVNDI 946
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1064 DTKQTN-----ARLQNELDTLKENNLKTVE-ELNKSKELLSVENQKMEEFKKEIETLKQAAAQKSQQLSALQEE--NVKL 1135
Cdd:TIGR00606 947 KEKVKNihgymKDIENKIQDGKDDYLKQKEtELNTVNAQLEECEKHQEKINEDMRLMRQDIDTQKIQERWLQDNltLRKR 1026
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1136 AEELGRTRDEVTSHQKLEEERSVLN-----NQLLEMKKSLPSNTLRESEFRKDADEEKASLQKSISLTSAllteKDAElE 1210
Cdd:TIGR00606 1027 ENELKEVEEELKQHLKEMGQMQVLQmkqehQKLEENIDLIKRNHVLALGRQKGYEKEIKHFKKELREPQF----RDAE-E 1101
|
890 900 910
....*....|....*....|....*....|...
gi 1720414379 1211 KLRNEVTVLRGENATAKSLHSVVQTLESDKVKL 1243
Cdd:TIGR00606 1102 KYREMMIVMRTTELVNKDLDIYYKTLDQAIMKF 1134
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
530-933 |
4.49e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 44.95 E-value: 4.49e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 530 FG--ARE---EAFQKEIKALHTATEKLSKENESLRSKLDHANKENSDVIALW-KSKLETAIASHQQAMEELkvsfskgig 603
Cdd:PRK04863 779 FGraAREkriEQLRAEREELAERYATLSFDVQKLQRLHQAFSRFIGSHLAVAfEADPEAELRQLNRRRVEL--------- 849
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 604 tdSAEFAELKTQIERLRLDYQHEIESLQSKQDSERSAHAKEMETMQAKLMKIIKEKEDSLEAvkARLDSAEDQHLVEMED 683
Cdd:PRK04863 850 --ERALADHESQEQQQRSQLEQAKEGLSALNRLLPRLNLLADETLADRVEEIREQLDEAEEA--KRFVQQHGNALAQLEP 925
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 684 TLNKLQEAEikvKELEVLQAKYTEQSEVIGNFTSQLSAVKEKLLDLDALRKANSEGKLE-----LETLRQQLEGAEKQIK 758
Cdd:PRK04863 926 IVSVLQSDP---EQFEQLKQDYQQAQQTQRDAKQQAFALTEVVQRRAHFSYEDAAEMLAknsdlNEKLRQRLEQAEQERT 1002
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 759 NLETE-RNAESskansitkELQEKELVLTGLQDSLNQVNQVKETLEKELQTLKEKFASTSEEAVSAQtrmQDTVNK-LHQ 836
Cdd:PRK04863 1003 RAREQlRQAQA--------QLAQYNQVLASLKSSYDAKRQMLQELKQELQDLGVPADSGAEERARAR---RDELHArLSA 1071
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 837 KEEQFNVLSSELEKLRENLTDMEAKFK--EKD--DREDQLVKAKekleNDIAEIMKMSGDNSsqltkmnDELRLKERSVE 912
Cdd:PRK04863 1072 NRSRRNQLEKQLTFCEAEMDNLTKKLRklERDyhEMREQVVNAK----AGWCAVLRLVKDNG-------VERRLHRRELA 1140
|
410 420
....*....|....*....|.
gi 1720414379 913 ELqlkltKANENASFLQKSIG 933
Cdd:PRK04863 1141 YL-----SADELRSMSDKALG 1156
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
624-865 |
5.47e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.98 E-value: 5.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 624 QHEIESLQSKQDSERSAhAKEMETMQAKLMKIIKEKEDSLEAVKARLDSAEDQhLVEMEDTLNKLQeaeikvKELEVLQA 703
Cdd:COG4942 26 EAELEQLQQEIAELEKE-LAALKKEEKALLKQLAALERRIAALARRIRALEQE-LAALEAELAELE------KEIAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 704 KYTEQSEVIGNFtsqlsavkeklldLDALRKANSEGKLELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEkel 783
Cdd:COG4942 98 ELEAQKEELAEL-------------LRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAE--- 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 784 vLTGLQDSLNQVNQVKETLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFK 863
Cdd:COG4942 162 -LAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAA 240
|
..
gi 1720414379 864 EK 865
Cdd:COG4942 241 ER 242
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
817-1212 |
6.51e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 44.56 E-value: 6.51e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 817 SEEAVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDDR-------------EDQLVKAKEKLENDI 883
Cdd:PRK04863 285 LEEALELRRELYTSRRQLAAEQYRLVEMARELAELNEAESDLEQDYQAASDHlnlvqtalrqqekIERYQADLEELEERL 364
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 884 AEIMKMSGDNSSQLTKMNDELRLKERSVEELQLKLTKANENASFLQKsigevtlKAEQSQQ--QAARKHEEEKKELEEKL 961
Cdd:PRK04863 365 EEQNEVVEEADEQQEENEARAEAAEEEVDELKSQLADYQQALDVQQT-------RAIQYQQavQALERAKQLCGLPDLTA 437
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 962 LELEKKMETSYNQCQDLKAKYEKA------SSETKTKHEEILQNLQKMLADTEDklKAAQEANRDLMQDMEELKTQADKA 1035
Cdd:PRK04863 438 DNAEDWLEEFQAKEQEATEELLSLeqklsvAQAAHSQFEQAYQLVRKIAGEVSR--SEAWDVARELLRRLREQRHLAEQL 515
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1036 KAAQTA-----------EDAMQIMEQMTKEKTETLASLEDTKQTNARLQNELDTLKennlktvEELNKSKELLSVENQKM 1104
Cdd:PRK04863 516 QQLRMRlseleqrlrqqQRAERLLAEFCKRLGKNLDDEDELEQLQEELEARLESLS-------ESVSEARERRMALRQQL 588
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1105 EEFKKEIETLkqaaAQKSQQLSALQEENVKLAEELGrtrDEVTSHQKLEEERSvlnnQLLEMKKSLpsntlreSEFRKDA 1184
Cdd:PRK04863 589 EQLQARIQRL----AARAPAWLAAQDALARLREQSG---EEFEDSQDVTEYMQ----QLLEREREL-------TVERDEL 650
|
410 420
....*....|....*....|....*...
gi 1720414379 1185 DEEKASLQKSISLTSALLTEKDAELEKL 1212
Cdd:PRK04863 651 AARKQALDEEIERLSQPGGSEDPRLNAL 678
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1035-1265 |
6.74e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.60 E-value: 6.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1035 AKAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNARLQNELDTLKEnnlktveELNKSKELLSVENQKMEEFKKEIETL 1114
Cdd:COG4942 16 AAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALER-------RIAALARRIRALEQELAALEAELAEL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1115 KQAAAQKSQQLSALQEENVKLAEELGRTRDE------VTSHQKLEEERSV-----LNNQLLEMKKSLPSNTLRESEFRKD 1183
Cdd:COG4942 89 EKEIAELRAELEAQKEELAELLRALYRLGRQpplallLSPEDFLDAVRRLqylkyLAPARREQAEELRADLAELAALRAE 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1184 ADEEKASLQKSIsltsALLTEKDAELEKLRNEV-TVLRGENATAKSLHSVVQTLESDKVKLELKVKNLELQLKENKRQLS 1262
Cdd:COG4942 169 LEAERAELEALL----AELEEERAALEALKAERqKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTP 244
|
...
gi 1720414379 1263 SSS 1265
Cdd:COG4942 245 AAG 247
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
626-891 |
7.28e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 43.85 E-value: 7.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 626 EIESLQSKQDsersaHAKEMETMQAKLMKIIKEKEDsleAVKARLDSAEDQHLVEMEDTLNKLQEAEIKVKELEVLQAKY 705
Cdd:PHA02562 182 QIQTLDMKID-----HIQQQIKTYNKNIEEQRKKNG---ENIARKQNKYDELVEEAKTIKAEIEELTDELLNLVMDIEDP 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 706 TEQSEVIGNFTSQLSAvkeKLLDLDALRKANSEGKlELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEkelvL 785
Cdd:PHA02562 254 SAALNKLNTAAAKIKS---KIEQFQKVIKMYEKGG-VCPTCTQQISEGPDRITKIKDKLKELQHSLEKLDTAIDE----L 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 786 TGLQDSLNQVNQVKETLEKELQTLKEKFASTSEEAVSAQTRMQdtvnklhQKEEQFNVLSSELEKLRENLTDmeaKFKEK 865
Cdd:PHA02562 326 EEIMDEFNEQSKKLLELKNKISTNKQSLITLVDKAKKVKAAIE-------ELQAEFVDNAEELAKLQDELDK---IVKTK 395
|
250 260
....*....|....*....|....*..
gi 1720414379 866 DDredqlvKAKEKLENDIA-EIMKMSG 891
Cdd:PHA02562 396 SE------LVKEKYHRGIVtDLLKDSG 416
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
404-563 |
7.70e-04 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 42.60 E-value: 7.70e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 404 ELEAKMDQLRTMVEAADREKVELLNQLEEEKRKVEDLQFRVE--EESITKGDLEVATVSEK-----SRIMEL--EKDLAL 474
Cdd:COG1579 14 ELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEdlEKEIKRLELEIEEVEARikkyeEQLGNVrnNKEYEA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 475 RAQEVAELRRRLESSKppgdvDMSLSLLQEISALQEKLEAIhtdhQGEMTSLKEHFGAREEAFQKEIKALHTATEKLSKE 554
Cdd:COG1579 94 LQKEIESLKRRISDLE-----DEILELMERIEELEEELAEL----EAELAELEAELEEKKAELDEELAELEAELEELEAE 164
|
....*....
gi 1720414379 555 NESLRSKLD 563
Cdd:COG1579 165 REELAAKIP 173
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
720-1044 |
8.04e-04 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 43.35 E-value: 8.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 720 SAVKEKLLDLDALRKANSEGKLELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEKELVLTGLQDSLNQVNQVK 799
Cdd:COG4372 31 EQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQEEA 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 800 ETLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDDREdqLVKAKEKL 879
Cdd:COG4372 111 EELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAE--AEQALDEL 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 880 ENDIAEIMKMSGDNSSQLTKMNDELRLKERSVEELQLKLTKANENASFLQKSIGEVTLKAEQSQQQAARKHEEEKKELEE 959
Cdd:COG4372 189 LKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELELAIL 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 960 KLLELEKKMETSYNQCQDLKAKYEKASSETKTKHEEILQNLQKMLADTEDKLKAAQEANRDLMQDMEELKTQADKAKAAQ 1039
Cdd:COG4372 269 VEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALAILLAELADLLQLLLV 348
|
....*
gi 1720414379 1040 TAEDA 1044
Cdd:COG4372 349 GLLDN 353
|
|
| EzrA |
pfam06160 |
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like ... |
538-881 |
8.65e-04 |
|
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerizes into a ring structure that establishes the location of the nascent division site. EzrA modulates the frequency and position of FtsZ ring formation. The structure contains 5 spectrin like alpha helical repeats.
Pssm-ID: 428797 [Multi-domain] Cd Length: 542 Bit Score: 43.69 E-value: 8.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 538 QKEIKALHTATEKLSKENESLRSKLDHANKEnsdvIALWKSKLETAIASHQQAMEELKVSFSKGIG-TDSAEFAELKTQI 616
Cdd:pfam06160 106 LEELDELLESEEKNREEVEELKDKYRELRKT----LLANRFSYGPAIDELEKQLAEIEEEFSQFEElTESGDYLEAREVL 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 617 ERLRldyqHEIESLQSK-----------------QDSERSAHAKEMETMQ-----AKLMKIIKEKEDSLEAVKARLDSae 674
Cdd:pfam06160 182 EKLE----EETDALEELmedipplyeelktelpdQLEELKEGYREMEEEGyalehLNVDKEIQQLEEQLEENLALLEN-- 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 675 dqhlVEMEDTLNKLQEAEIKVKEL-EVLQAKYTEQSEVIGNFtsqlsavkEKLLD-LDALRKANSEGKLELETLRQ--QL 750
Cdd:pfam06160 256 ----LELDEAEEALEEIEERIDQLyDLLEKEVDAKKYVEKNL--------PEIEDyLEHAEEQNKELKEELERVQQsyTL 323
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 751 EGAEKQI-KNLETERNAESSKANSITKELQEKELVLTGLQDSLNQVNQVKETLEKELQTLKEKFASTSEEAVSAQTRMQD 829
Cdd:pfam06160 324 NENELERvRGLEKQLEELEKRYDEIVERLEEKEVAYSELQEELEEILEQLEEIEEEQEEFKESLQSLRKDELEAREKLDE 403
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1720414379 830 TVNKLH----------------QKEEQFNVLSSELEKLRENLT----DMEAKFKEKDDREDQLVKAKEKLEN 881
Cdd:pfam06160 404 FKLELReikrlveksnlpglpeSYLDYFFDVSDEIEDLADELNevplNMDEVNRLLDEAQDDVDTLYEKTEE 475
|
|
| Filament |
pfam00038 |
Intermediate filament protein; |
500-808 |
9.33e-04 |
|
Intermediate filament protein;
Pssm-ID: 459643 [Multi-domain] Cd Length: 313 Bit Score: 42.99 E-value: 9.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 500 SLLQEISALQEKLEAIHTDHQGEMTSLKEHFgareeafQKEIKALHTATEKLSKENESLRSKLDHANKENSDVialwKSK 579
Cdd:pfam00038 22 FLEQQNKLLETKISELRQKKGAEPSRLYSLY-------EKEIEDLRRQLDTLTVERARLQLELDNLRLAAEDF----RQK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 580 LETAIAsHQQAMEelkvsfskgigtdsAEFAELKTQIERL---RLDYQHEIESLQSKQDSERSAHAKEMETMQAKLmkii 656
Cdd:pfam00038 91 YEDELN-LRTSAE--------------NDLVGLRKDLDEAtlaRVDLEAKIESLKEELAFLKKNHEEEVRELQAQV---- 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 657 kekedSLEAVKARLDSAEDQHLVE-MEDTLNKLQE-AEIKVKELEVL-QAKYTEQSEVIGNFTSQLSAVKEKLLDldaLR 733
Cdd:pfam00038 152 -----SDTQVNVEMDAARKLDLTSaLAEIRAQYEEiAAKNREEAEEWyQSKLEELQQAAARNGDALRSAKEEITE---LR 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 734 KANSEGKLELETLRQQLEGAEKQIKNLETERNAESSKANSItkeLQEKELVLTGLQDSLNQVNQ-------VKETLEKEL 806
Cdd:pfam00038 224 RTIQSLEIELQSLKKQKASLERQLAETEERYELQLADYQEL---ISELEAELQETRQEMARQLReyqellnVKLALDIEI 300
|
..
gi 1720414379 807 QT 808
Cdd:pfam00038 301 AT 302
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
740-909 |
9.67e-04 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 43.53 E-value: 9.67e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 740 KLELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEKelvltgLQDSLNQvnqvketLEKELQTLKEKFastsEE 819
Cdd:COG0542 403 RMEIDSKPEELDELERRLEQLEIEKEALKKEQDEASFERLAE------LRDELAE-------LEEELEALKARW----EA 465
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 820 AVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDDredqlvkakeklENDIAEIM---------KMS 890
Cdd:COG0542 466 EKELIEEIQELKEELEQRYGKIPELEKELAELEEELAELAPLLREEVT------------EEDIAEVVsrwtgipvgKLL 533
|
170
....*....|....*....
gi 1720414379 891 GDNSSQLTKMNDElrLKER 909
Cdd:COG0542 534 EGEREKLLNLEEE--LHER 550
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
906-1175 |
1.10e-03 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 43.75 E-value: 1.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 906 LKERSVEELQLKLTKAN-ENASFLQKSIGEVTLKAEQSQQQAARkheeekkeleeklleLEKKMETSYNQCQDLKAKYEK 984
Cdd:PRK11281 48 LNKQKLLEAEDKLVQQDlEQTLALLDKIDRQKEETEQLKQQLAQ---------------APAKLRQAQAELEALKDDNDE 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 985 ASSETKTKHEeiLQNLQKMLADTEDKLKAAQEANRDLMQDMEELKTQADKAKAAQTAedAMQIMEQMTKEKTETLASLED 1064
Cdd:PRK11281 113 ETRETLSTLS--LRQLESRLAQTLDQLQNAQNDLAEYNSQLVSLQTQPERAQAALYA--NSQRLQQIRNLLKGGKVGGKA 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1065 TKQT-----NARL-----QNELD-TLKENNLKTVEELNKSKELLSVENQKMEEF----------KKEIETLKQAAAQKSQ 1123
Cdd:PRK11281 189 LRPSqrvllQAEQallnaQNDLQrKSLEGNTQLQDLLQKQRDYLTARIQRLEHQlqllqeainsKRLTLSEKTVQEAQSQ 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1124 QLSA-------LQEE---NVKLAEELGRTRDEVT------------------SHQKLEEERSVLNNQLL------EMKKS 1169
Cdd:PRK11281 269 DEAAriqanplVAQEleiNLQLSQRLLKATEKLNtltqqnlrvknwldrltqSERNIKEQISVLKGSLLlsrilyQQQQA 348
|
....*.
gi 1720414379 1170 LPSNTL 1175
Cdd:PRK11281 349 LPSADL 354
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
788-1033 |
1.49e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 43.08 E-value: 1.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 788 LQDSLNQVNQVKETLEKELQTLKEKfASTSEEAVSA-QTRmqdtvNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKD 866
Cdd:COG3206 166 LELRREEARKALEFLEEQLPELRKE-LEEAEAALEEfRQK-----NGLVDLSEEAKLLLQQLSELESQLAEARAELAEAE 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 867 DREDQLVKAKEKLENDIAEIMkmsgdNSSQLTKMNDELRLKERSVEELQLKLTKANEnasflqksigevTLKAEQSQQQA 946
Cdd:COG3206 240 ARLAALRAQLGSGPDALPELL-----QSPVIQQLRAQLAELEAELAELSARYTPNHP------------DVIALRAQIAA 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 947 ARKheEEKKELEEKLLELEKKMETSYNQCQDLKAKYEKASSETKTkheeiLQNLQKMLADTEDKLKAAQEANRDLMQDME 1026
Cdd:COG3206 303 LRA--QLQQEAQRILASLEAELEALQAREASLQAQLAQLEARLAE-----LPELEAELRRLEREVEVARELYESLLQRLE 375
|
....*..
gi 1720414379 1027 ELKTQAD 1033
Cdd:COG3206 376 EARLAEA 382
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
577-794 |
1.52e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.44 E-value: 1.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 577 KSKLETAIASHQQAMEELKvsfsKGIGTDSAEFAELKTQIERLrldyqheiESLQSKQDSERSAHAKEMETMQAKLMKII 656
Cdd:COG4942 29 LEQLQQEIAELEKELAALK----KEEKALLKQLAALERRIAAL--------ARRIRALEQELAALEAELAELEKEIAELR 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 657 KEKEDSLEAVKARLDSAEDQHLVEMEDTLNKLQEAEIKVKELEVLQAKYTEQSEVIGNFTSQLSAVKEKLLDLDALRKAN 736
Cdd:COG4942 97 AELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAEL 176
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 1720414379 737 SEGKLELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEKELVLTGLQDSLNQ 794
Cdd:COG4942 177 EALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEA 234
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
997-1177 |
1.87e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 41.45 E-value: 1.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 997 LQNLQKMLADTEDKLKAAQEANRDLMQDMEELKTQADKAKAAQT-AEDAMQIMEQMTKEKTETLASLEDTKQTNArLQNE 1075
Cdd:COG1579 19 LDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKrLELEIEEVEARIKKYEEQLGNVRNNKEYEA-LQKE 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1076 LDTLKENnlktveelnkskelLSVENQKMEEFKKEIETLKQAAAQKSQQLSALQEEnvkLAEELGRTRDEVtshQKLEEE 1155
Cdd:COG1579 98 IESLKRR--------------ISDLEDEILELMERIEELEEELAELEAELAELEAE---LEEKKAELDEEL---AELEAE 157
|
170 180
....*....|....*....|..
gi 1720414379 1156 RSVLNNQLLEMKKSLPSNTLRE 1177
Cdd:COG1579 158 LEELEAEREELAAKIPPELLAL 179
|
|
| FPP |
pfam05911 |
Filament-like plant protein, long coiled-coil; FPP is a family of long coiled-coil plant ... |
716-885 |
1.95e-03 |
|
Filament-like plant protein, long coiled-coil; FPP is a family of long coiled-coil plant proteins that are filament-like. It interacts with the nuclear envelope-associated protein, MAF1, the WPP family pfam13943.
Pssm-ID: 461778 [Multi-domain] Cd Length: 859 Bit Score: 42.74 E-value: 1.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 716 TSQLSAVKEKLLDLDALRKANSEGKLELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEKELVLTGLQDSLNQV 795
Cdd:pfam05911 656 IDNLSSDPEIPSDGPLVSGSNDLKTEENKRLKEEFEQLKSEKENLEVELASCTENLESTKSQLQESEQLIAELRSELASL 735
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 796 NQVKETLEKELQTLKEKFASTSEEAVSAQTRmqdtVNKLHQKeeqFNVLSSELEKLRENLTDMEAKFKEkddREDQL--V 873
Cdd:pfam05911 736 KESNSLAETQLKCMAESYEDLETRLTELEAE----LNELRQK---FEALEVELEEEKNCHEELEAKCLE---LQEQLerN 805
|
170
....*....|..
gi 1720414379 874 KAKEKLENDIAE 885
Cdd:pfam05911 806 EKKESSNCDADQ 817
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1053-1236 |
1.97e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 42.45 E-value: 1.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1053 KEKTETLASLEDTKQTNARLQNELDTLKENnlktVEELNKSKELLSVENQKMEEfKKEIETLKQAAAQKSQQLSALQEEN 1132
Cdd:COG4717 74 KELEEELKEAEEKEEEYAELQEELEELEEE----LEELEAELEELREELEKLEK-LLQLLPLYQELEALEAELAELPERL 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1133 VKLAEELGRTRDEVTSHQKLEEERSVLNNQLLEMKKSLPSNTLRESEfrkDADEEKASLQKSISLTSALLTEKDAELEKL 1212
Cdd:COG4717 149 EELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQ---DLAEELEELQQRLAELEEELEEAQEELEEL 225
|
170 180
....*....|....*....|....
gi 1720414379 1213 RNEVTVLRGENATAKSLHSVVQTL 1236
Cdd:COG4717 226 EEELEQLENELEAAALEERLKEAR 249
|
|
| PLN03229 |
PLN03229 |
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional |
1010-1336 |
2.00e-03 |
|
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional
Pssm-ID: 178768 [Multi-domain] Cd Length: 762 Bit Score: 42.53 E-value: 2.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1010 KLKAAQEANRDLMQDMEELKTQADKAKaaqtaEDAMQIMEQMTKEKTETLASLEDTKQTNA----RLQNELDTLKENNLK 1085
Cdd:PLN03229 423 KREAVKTPVRELEGEVEKLKEQILKAK-----ESSSKPSELALNEMIEKLKKEIDLEYTEAviamGLQERLENLREEFSK 497
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1086 TVEELNKSKELLSVENQK-MEEFKKEI------ETLKQA-----AAQKSQQLSALQEENVKLAEELGRTRDEVTSHQKLE 1153
Cdd:PLN03229 498 ANSQDQLMHPVLMEKIEKlKDEFNKRLsrapnyLSLKYKldmlnEFSRAKALSEKKSKAEKLKAEINKKFKEVMDRPEIK 577
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1154 EERSVLNNQLLEMKKS----LPSNTLRE-SEFRKDADEEKASLQKSISLTSALLTEKDAEL------EKLRNEVTVLRGE 1222
Cdd:PLN03229 578 EKMEALKAEVASSGASsgdeLDDDLKEKvEKMKKEIELELAGVLKSMGLEVIGVTKKNKDTaeqtppPNLQEKIESLNEE 657
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1223 naTAKSLHSVVQTLEsdkvkLELKVKNLELQLKENkrqlSSSSGNTDAQAEEDERAQESQQMIDFLNSviVDLQRKNQDL 1302
Cdd:PLN03229 658 --INKKIERVIRSSD-----LKSKIELLKLEVAKA----SKTPDVTEKEKIEALEQQIKQKIAEALNS--SELKEKFEEL 724
|
330 340 350
....*....|....*....|....*....|....
gi 1720414379 1303 KMKVEMMSEAALNGNGEDLNSYDSDDQEKQSKKK 1336
Cdd:PLN03229 725 EAELAAARETAAESNGSLKNDDDKEEDSKEDGSR 758
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
462-693 |
2.02e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 42.70 E-value: 2.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 462 KSRIMELEKDLALRAQEVAELRRRLESSKPPGDVDMslsLLQEISALQEKLEAIhtdhQGEMTSLKehfgAREEAFQKEI 541
Cdd:COG3206 181 EEQLPELRKELEEAEAALEEFRQKNGLVDLSEEAKL---LLQQLSELESQLAEA----RAELAEAE----ARLAALRAQL 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 542 KALHTATEKLSkeneslrskldhankeNSDVIAlwksKLETAIASHQQAMEELKVSFskgiGTDSAEFAELKTQIERLRL 621
Cdd:COG3206 250 GSGPDALPELL----------------QSPVIQ----QLRAQLAELEAELAELSARY----TPNHPDVIALRAQIAALRA 305
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1720414379 622 DYQHEIESLQSKQDSERSAHAKEMETMQAKL------MKIIKEKEDSLEAVKARLDSAEDQHlvemEDTLNKLQEAEI 693
Cdd:COG3206 306 QLQQEAQRILASLEAELEALQAREASLQAQLaqlearLAELPELEAELRRLEREVEVARELY----ESLLQRLEEARL 379
|
|
| PRK10246 |
PRK10246 |
exonuclease subunit SbcC; Provisional |
726-1237 |
2.43e-03 |
|
exonuclease subunit SbcC; Provisional
Pssm-ID: 182330 [Multi-domain] Cd Length: 1047 Bit Score: 42.48 E-value: 2.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 726 LLDLDALRKANSEGKLELETLRQQLEGAEKQIKNLETERNAEssKANSITKELQEKELVLTGLQDSLNQVNQvketlekE 805
Cdd:PRK10246 249 LTRLDELQQEASRRQQALQQALAAEEKAQPQLAALSLAQPAR--QLRPHWERIQEQSAALAHTRQQIEEVNT-------R 319
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 806 LQTLKEKFASTSEEAVSAQTRMQDTVNKLHQ---KEEQFNVLSSELEKLRenltdmeAKFKEKDDREDQLVKAKEKLend 882
Cdd:PRK10246 320 LQSTMALRARIRHHAAKQSAELQAQQQSLNTwlaEHDRFRQWNNELAGWR-------AQFSQQTSDREQLRQWQQQL--- 389
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 883 iaeimkmsgdnssqltkmnDELRLKERSVEELQLKLTkANENASFLqksigevtlkAEQSQQQAARKHEEEKKELEEKLL 962
Cdd:PRK10246 390 -------------------THAEQKLNALPAITLTLT-ADEVAAAL----------AQHAEQRPLRQRLVALHGQIVPQQ 439
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 963 ELEKKMETSYNQCQDLKAKYEKASSETKTKHEEILQNLQ--KMLADTEDKLKAAqEANRDLMQDMEEL------------ 1028
Cdd:PRK10246 440 KRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLAdvKTICEQEARIKDL-EAQRAQLQAGQPCplcgstshpave 518
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1029 KTQADKAKAAQTAEDAM-QIMEQMTKEKTETLASLEDTKQTNARLQNELDTLKENNLKTVEELNKSKELLSVENQKMEEf 1107
Cdd:PRK10246 519 AYQALEPGVNQSRLDALeKEVKKLGEEGAALRGQLDALTKQLQRDESEAQSLRQEEQALTQQWQAVCASLNITLQPQDD- 597
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1108 kkeIETLKQAAAQKSQQLSALQEENVKLAEELGRTRDEVTSHQKLEEERSVLNNQLLEMKKSLPSN-------TLRESEF 1180
Cdd:PRK10246 598 ---IQPWLDAQEEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQQLLTALAGYALTLPQEdeeaswlATRQQEA 674
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1720414379 1181 R--KDADEEKASLQKSISLTSALLTEKDAELEKLRNEVTV----LRGENATAKSLHSVVQTLE 1237
Cdd:PRK10246 675 QswQQRQNELTALQNRIQQLTPLLETLPQSDDLPHSEETValdnWRQVHEQCLSLHSQLQTLQ 737
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
551-791 |
2.47e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 42.31 E-value: 2.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 551 LSKENESLRSKLDHANkENSDVIALWKSKLETAIASHQQAMEELKVSfskgigtDSAEFAELKTQIERLR---LDYQHEI 627
Cdd:PHA02562 165 LSEMDKLNKDKIRELN-QQIQTLDMKIDHIQQQIKTYNKNIEEQRKK-------NGENIARKQNKYDELVeeaKTIKAEI 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 628 ESLQ------SKQDSERSAHAKEMETMQAKL-------MKIIKEKED---------SLEAVKARLDSAEDQhLVEMEDTL 685
Cdd:PHA02562 237 EELTdellnlVMDIEDPSAALNKLNTAAAKIkskieqfQKVIKMYEKggvcptctqQISEGPDRITKIKDK-LKELQHSL 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 686 NKLQEAeikVKELEVLQAKYTEQSEVIGNFTSQLSAVKEkllDLDALRKANSEGKLELETLRQQLEGAEKQIKNLETERN 765
Cdd:PHA02562 316 EKLDTA---IDELEEIMDEFNEQSKKLLELKNKISTNKQ---SLITLVDKAKKVKAAIEELQAEFVDNAEELAKLQDELD 389
|
250 260
....*....|....*....|....*.
gi 1720414379 766 AESSKANSITKELQEKELVLTGLQDS 791
Cdd:PHA02562 390 KIVKTKSELVKEKYHRGIVTDLLKDS 415
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
742-949 |
2.54e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 41.74 E-value: 2.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 742 ELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQEKELVLTGLQDSLN----QVNQVKETLEKELQTLKEKFASTS 817
Cdd:COG3883 24 ELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAeaeaEIEERREELGERARALYRSGGSVS 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 818 E-EAVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLENDIAEIMKMSGDNSSQ 896
Cdd:COG3883 104 YlDVLLGSESFSDFLDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAELEAQQAEQEAL 183
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 1720414379 897 LTKMNDELRLKERSVEELQLKLTKANENASFLQKSIGEVTLKAEQSQQQAARK 949
Cdd:COG3883 184 LAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAA 236
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
350-732 |
2.60e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 42.19 E-value: 2.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 350 TALQEALKEKQQHIEQLLAERDleraevaKATSHVGEIEQELALARDGHDQHVLELEAKMDQLRTMVEAADREKVELLNQ 429
Cdd:pfam07888 30 ELLQNRLEECLQERAELLQAQE-------AANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEEK 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 430 LEEEKRKVEDLqfrveeeSITKGDLEVATVSEKSRIMELEKDLALRAQEVAELRRRLESSKPpgDVDMSLSLLQEISALQ 509
Cdd:pfam07888 103 YKELSASSEEL-------SEEKDALLAQRAAHEARIRELEEDIKTLTQRVLERETELERMKE--RAKKAGAQRKEEEAER 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 510 EKLEAIHTDHQGEMTSL-KEHFGAREEAFQKEIKALhtateKLSKENESLRSKLDHANKENSDVIALWK--SKLETAIAS 586
Cdd:pfam07888 174 KQLQAKLQQTEEELRSLsKEFQELRNSLAQRDTQVL-----QLQDTITTLTQKLTTAHRKEAENEALLEelRSLQERLNA 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 587 HQQAMEELKVSFSKGIGTDSAEFAEL-KTQIERLRLDYQHEIESLQSKQDseRSAHAKEMETMQ----------AKLMKI 655
Cdd:pfam07888 249 SERKVEGLGEELSSMAAQRDRTQAELhQARLQAAQLTLQLADASLALREG--RARWAQERETLQqsaeadkdriEKLSAE 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 656 IKEKEDSL-------EAVKARLDSAEDQHLVEMEDTLNKLQE--AEIKV--KELEVLQAKYTEQSEVIGNFTSQLSAVKE 724
Cdd:pfam07888 327 LQRLEERLqeermerEKLEVELGREKDCNRVQLSESRRELQElkASLRVaqKEKEQLQAEKQELLEYIRQLEQRLETVAD 406
|
....*...
gi 1720414379 725 KLLDLDAL 732
Cdd:pfam07888 407 AKWSEAAL 414
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
800-1286 |
2.78e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.21 E-value: 2.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 800 ETLEkELQTLKEKFASTSEEAvsAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKL 879
Cdd:COG4913 252 ELLE-PIRELAERYAAARERL--AELEYLRAALRLWFAQRRLELLEAELEELRAELARLEAELERLEARLDALREELDEL 328
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 880 ENDIAEImkmSGDNSSQLtkmndelrlkERSVEELQLKLTKANENASFLQKSIGEVTLKAEQSQQQAARKHEEEKKELEE 959
Cdd:COG4913 329 EAQIRGN---GGDRLEQL----------EREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEA 395
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 960 KLLELEKKMETSYnqcqDLKAKYEKASSETKTKHEEIL----------QNLQKMLADTEDKLKAAQEANR---DLMQDME 1026
Cdd:COG4913 396 LEEELEALEEALA----EAEAALRDLRRELRELEAEIAslerrksnipARLLALRDALAEALGLDEAELPfvgELIEVRP 471
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1027 E-----------LKTQA-------DKAKAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAR-LQNELDTlKENNLKT- 1086
Cdd:COG4913 472 EeerwrgaiervLGGFAltllvppEHYAAALRWVNRLHLRGRLVYERVRTGLPDPERPRLDPDsLAGKLDF-KPHPFRAw 550
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1087 -VEELNKSKELLSVENQkmEEFKKE--------------------------------------IETLKQAAAQKSQQLSA 1127
Cdd:COG4913 551 lEAELGRRFDYVCVDSP--EELRRHpraitragqvkgngtrhekddrrrirsryvlgfdnrakLAALEAELAELEEELAE 628
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1128 LQEENVKLAEELGRTRDEVTSHQKLEE-------------ERSVLNNQLLEMKKSlpSNTLRESEFR-KDADEEKASLQK 1193
Cdd:COG4913 629 AEERLEALEAELDALQERREALQRLAEyswdeidvasaerEIAELEAELERLDAS--SDDLAALEEQlEELEAELEELEE 706
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1194 SISLTSALLTEKDAELEKLRNEVTVLRGENATAKSLHSVVQTLESDKVKLELKVKNLELQLKENKRQlssssgntDAQAE 1273
Cdd:COG4913 707 ELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAALGDAVERELRENLEE--------RIDAL 778
|
570
....*....|...
gi 1720414379 1274 EDERAQESQQMID 1286
Cdd:COG4913 779 RARLNRAEEELER 791
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
350-1147 |
2.79e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 42.47 E-value: 2.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 350 TALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELAlARDGHDQHVLELEAKMDQLRTMVEaadREKVELLNQ 429
Cdd:pfam01576 260 NNALKKIRELEAQISELQEDLESERAARNKAEKQRRDLGEELE-ALKTELEDTLDTTAAQQELRSKRE---QEVTELKKA 335
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 430 LEEEKRK---------------VEDLQFRVEEESITKGDLEVATVSEKSRIMELEKDLAL---RAQEVAELRRRLE---- 487
Cdd:pfam01576 336 LEEETRSheaqlqemrqkhtqaLEELTEQLEQAKRNKANLEKAKQALESENAELQAELRTlqqAKQDSEHKRKKLEgqlq 415
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 488 --------SSKPPGDVDMSLSLLQ----EISALQEKLEAIHTDHQGEMTSLKEHFGAREEAFQKEIK---ALHTATEKLS 552
Cdd:pfam01576 416 elqarlseSERQRAELAEKLSKLQseleSVSSLLNEAEGKNIKLSKDVSSLESQLQDTQELLQEETRqklNLSTRLRQLE 495
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 553 KENESLRSKLDHANKEnsdvialwKSKLETAIASHQQAMEELKVSFSkgigtdsaEFAELKTQIERLRLDYQHEIESLqS 632
Cdd:pfam01576 496 DERNSLQEQLEEEEEA--------KRNVERQLSTLQAQLSDMKKKLE--------EDAGTLEALEEGKKRLQRELEAL-T 558
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 633 KQDSERSAHAKEMETMQAKLMKIIKEKEDSLEAVKARLDSAE------DQHLVEMEDTLNKLQ------EAEIKVKELEV 700
Cdd:pfam01576 559 QQLEEKAAAYDKLEKTKNRLQQELDDLLVDLDHQRQLVSNLEkkqkkfDQMLAEEKAISARYAeerdraEAEAREKETRA 638
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 701 LqakyteqsevignftSQLSAVKEKLLDLDALRKANSEGKLELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQE 780
Cdd:pfam01576 639 L---------------SLARALEEALEAKEELERTNKQLRAEMEDLVSSKDDVGKNVHELERSKRALEQQVEEMKTQLEE 703
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 781 kelvltgLQDSLNQVNQVKETLEKELQTLKEKFAstseeavsaqtrmQDTVNKLHQKEEQFNVLSSELEklrenltDMEA 860
Cdd:pfam01576 704 -------LEDELQATEDAKLRLEVNMQALKAQFE-------------RDLQARDEQGEEKRRQLVKQVR-------ELEA 756
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 861 KFKEKDDREDQLVKAKEKLENDIAEIM-------KMSGDNSSQLTKMNDELRLKERSVEELQLK----LTKANENASFLQ 929
Cdd:pfam01576 757 ELEDERKQRAQAVAAKKKLELDLKELEaqidaanKGREEAVKQLKKLQAQMKDLQRELEEARASrdeiLAQSKESEKKLK 836
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 930 KSIGEV-TLKAEQSQQQAARKHEEEKKELEEKLLELEkkmetsynqcqdlkAKYEKASSETKTKHEEILQNLQKMLADTE 1008
Cdd:pfam01576 837 NLEAELlQLQEDLAASERARRQAQQERDELADEIASG--------------ASGKSALQDEKRRLEARIAQLEEELEEEQ 902
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1009 DKLKAAQEANRDLMQDMEELKTQ-ADKAKAAQTAEDAMQIMEQMTKEKTETLASLEDT-----KQTNARLQNELDTLKEN 1082
Cdd:pfam01576 903 SNTELLNDRLRKSTLQVEQLTTElAAERSTSQKSESARQQLERQNKELKAKLQEMEGTvkskfKSSIAALEAKIAQLEEQ 982
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1720414379 1083 NLKTVEELNKSKELLSVENQKMEEFKKEIETLKQAAAQKSQQLSALQEENVKLAEELGRTRDEVT 1147
Cdd:pfam01576 983 LEQESRERQAANKLVRRTEKKLKEVLLQVEDERRHADQYKDQAEKGNSRMKQLKRQLEEAEEEAS 1047
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
334-865 |
3.15e-03 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 42.02 E-value: 3.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 334 LLTETSSRYARKISGTTALQ-EALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALARDGHDQHVLELEAKMDQL 412
Cdd:pfam05483 261 FLLEESRDKANQLEEKTKLQdENLKELIEKKDHLTKELEDIKMSLQRSMSTQKALEEDLQIATKTICQLTEEKEAQMEEL 340
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 413 rtmvEAADREKVELLNQLEEEKRKVEDLqFRVEEESITKGD--LEVATVSEKSRIMELEKDLALRAQ---EVAELRRRL- 486
Cdd:pfam05483 341 ----NKAKAAHSFVVTEFEATTCSLEEL-LRTEQQRLEKNEdqLKIITMELQKKSSELEEMTKFKNNkevELEELKKILa 415
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 487 ESSKPPGDVDMSLSLLQEISALQEKLEAIHTDHQGEMTSLKEHFGA---REEAFQKEIKALHTATEKLSKENESLRSKLD 563
Cdd:pfam05483 416 EDEKLLDEKKQFEKIAEELKGKEQELIFLLQAREKEIHDLEIQLTAiktSEEHYLKEVEDLKTELEKEKLKNIELTAHCD 495
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 564 HANKEN-------SDVIALWKSKLETAIASHQQAMEELKvsfskGIGTDSAEFAELKTQIERLRLDYQHEIESLQSKQD- 635
Cdd:pfam05483 496 KLLLENkeltqeaSDMTLELKKHQEDIINCKKQEERMLK-----QIENLEEKEMNLRDELESVREEFIQKGDEVKCKLDk 570
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 636 SERSAHAKEMETMQA-KLMKIIKEKEDSLEAvKARLDSAEDQHLVEMEDTLNKLQEAEikVKELEVLQAKyteqsevIGN 714
Cdd:pfam05483 571 SEENARSIEYEVLKKeKQMKILENKCNNLKK-QIENKNKNIEELHQENKALKKKGSAE--NKQLNAYEIK-------VNK 640
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 715 FTSQLSAVKEKLLDL-DALRKANSEGKLELETLRQQLEGAEKQIknleterNAESSKANSITKELQEKELVLTGLQDS-L 792
Cdd:pfam05483 641 LELELASAKQKFEEIiDNYQKEIEDKKISEEKLLEEVEKAKAIA-------DEAVKLQKEIDKRCQHKIAEMVALMEKhK 713
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1720414379 793 NQVNQVKETLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEK 865
Cdd:pfam05483 714 HQYDKIIEERDSELGLYKNKEQEQSSAKAALEIELSNIKAELLSLKKQLEIEKEEKEKLKMEAKENTAILKDK 786
|
|
| COG1340 |
COG1340 |
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]; |
643-888 |
3.28e-03 |
|
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown];
Pssm-ID: 440951 [Multi-domain] Cd Length: 297 Bit Score: 41.05 E-value: 3.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 643 KEMETMQAKLMKIIKEKEDSLEAVKARLDSAEDQ--HLVEMEDTLNK-----LQEAEIKVKELEVLQAKYTEQSEVIGNF 715
Cdd:COG1340 4 DELSSSLEELEEKIEELREEIEELKEKRDELNEElkELAEKRDELNAqvkelREEAQELREKRDELNEKVKELKEERDEL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 716 TSQLSAVKEKLLDLDALRKANSEGKLELETLRQQLEGAEKQIKNleternaesskaNSITKElQEKELV--LTGLQDSLN 793
Cdd:COG1340 84 NEKLNELREELDELRKELAELNKAGGSIDKLRKEIERLEWRQQT------------EVLSPE-EEKELVekIKELEKELE 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 794 QVNQVKEtLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQKEEQFNVLSSELEKLRENLTDMEAKFKEKDDREDQLV 873
Cdd:COG1340 151 KAKKALE-KNEKLKELRAELKELRKEAEEIHKKIKELAEEAQELHEEMIELYKEADELRKEADELHKEIVEAQEKADELH 229
|
250
....*....|....*
gi 1720414379 874 KAKEKLENDIAEIMK 888
Cdd:COG1340 230 EEIIELQKELRELRK 244
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
743-1339 |
3.84e-03 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 41.75 E-value: 3.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 743 LETLRQQLEGAEKQIKNLETernAESSKANSITKELQEKELVLTGLQDslnQVNQVKETLEKELQTLKEKFASTSE--EA 820
Cdd:pfam12128 253 LESAELRLSHLHFGYKSDET---LIASRQEERQETSAELNQLLRTLDD---QWKEKRDELNGELSAADAAVAKDRSelEA 326
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 821 VSAQTR--MQDTVNKLHQKEEQFNVLSSELEKLRENLT-------DMEAKF-----KEKDDREDQLVKAKEKLENDIAEI 886
Cdd:pfam12128 327 LEDQHGafLDADIETAAADQEQLPSWQSELENLEERLKaltgkhqDVTAKYnrrrsKIKEQNNRDIAGIKDKLAKIREAR 406
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 887 MKMSGDNSSQLTKMNDELRlkersvEELQLKLTKANENASFLQKSIGEvtLKAEQSQQQAarkheeekkeleekLLELEK 966
Cdd:pfam12128 407 DRQLAVAEDDLQALESELR------EQLEAGKLEFNEEEYRLKSRLGE--LKLRLNQATA--------------TPELLL 464
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 967 KMETSYNQCQDLKAKYEKASSETKTKHEEILQnLQKMLADTEDKLKAAQEANRDLMQDMEELKTQADKAkaAQTAEDAMQ 1046
Cdd:pfam12128 465 QLENFDERIERAREEQEAANAEVERLQSELRQ-ARKRRDQASEALRQASRRLEERQSALDELELQLFPQ--AGTLLHFLR 541
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1047 IMEQMTKEKTETLASLEDTKQTNarLQNELDTLKENNLKTVEELNkskelLSVENQKMEEFKKEIETLKQAAAQKSQQLS 1126
Cdd:pfam12128 542 KEAPDWEQSIGKVISPELLHRTD--LDPEVWDGSVGGELNLYGVK-----LDLKRIDVPEWAASEEELRERLDKAEEALQ 614
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1127 ALQEENVKLAEELGRTRDEVtSHQKLEEERSV------------LNNQLLEMKKSLPSNTLRESEF----RKDADEEKAS 1190
Cdd:pfam12128 615 SAREKQAAAEEQLVQANGEL-EKASREETFARtalknarldlrrLFDEKQSEKDKKNKALAERKDSanerLNSLEAQLKQ 693
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1191 LQKSISLTSALLTEKDAELEKLRNEvTVLRGENATAKSLHSVVQTLESDKVKLELKVKNLElqlKENKRQLSSSSGNTDa 1270
Cdd:pfam12128 694 LDKKHQAWLEEQKEQKREARTEKQA-YWQVVEGALDAQLALLKAAIAARRSGAKAELKALE---TWYKRDLASLGVDPD- 768
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1720414379 1271 qaeederaqesqqmidflnsVIVDLQRKNQDLKMKVEMMSeaalnGNGEDLNSYDSDDQEKQSKKKPRL 1339
Cdd:pfam12128 769 --------------------VIAKLKREIRTLERKIERIA-----VRRQEVLRYFDWYQETWLQRRPRL 812
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
394-1106 |
3.85e-03 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 41.96 E-value: 3.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 394 ARDGHDQHVLELEAKMDQLRTMVEAADRekvellNQLEEEKRKVEDLQFRVEEESITKGDLEVATvseKSRIMELEKDLA 473
Cdd:TIGR01612 1477 ATNDHDFNINELKEHIDKSKGCKDEADK------NAKAIEKNKELFEQYKKDVTELLNKYSALAI---KNKFAKTKKDSE 1547
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 474 LRAQEVAELRRR--LESSKPPgdvdmslsllQEISALQEKLEAIHTDHQGEMTSLKEHFGAR------EEAFQKeIKALH 545
Cdd:TIGR01612 1548 IIIKEIKDAHKKfiLEAEKSE----------QKIKEIKKEKFRIEDDAAKNDKSNKAAIDIQlslenfENKFLK-ISDIK 1616
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 546 TATEKLSKENESLRSKLDHANKENSDVIAlwkSKLETAIASHQQAMEELKvSFSKGIGTDSAEFAELKTQIERLRLDYQh 625
Cdd:TIGR01612 1617 KKINDCLKETESIEKKISSFSIDSQDTEL---KENGDNLNSLQEFLESLK-DQKKNIEDKKKELDELDSEIEKIEIDVD- 1691
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 626 eieslQSKQDSERSAHAKEMETMQAKLMKIIKEKEdSLEAVKARLDSAEDQHLVEMEDTLNKLQEAEIKVKELevlqakY 705
Cdd:TIGR01612 1692 -----QHKKNYEIGIIEKIKEIAIANKEEIESIKE-LIEPTIENLISSFNTNDLEGIDPNEKLEEYNTEIGDI------Y 1759
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 706 TEQSEVIGNFTSQLSAVKEKLLDLDALRKANSEGKLELetlrqqlegaekqIKNLETERNAESSKANSitkELQEKELVL 785
Cdd:TIGR01612 1760 EEFIELYNIIAGCLETVSKEPITYDEIKNTRINAQNEF-------------LKIIEIEKKSKSYLDDI---EAKEFDRII 1823
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 786 TGLQDSLNQVNqvkETLEKELQTLKEKF--ASTSEEAVSAQTRMQDTVNKLHQKEEQFNVLSSEleklrenltdmeaKFK 863
Cdd:TIGR01612 1824 NHFKKKLDHVN---DKFTKEYSKINEGFddISKSIENVKNSTDENLLFDILNKTKDAYAGIIGK-------------KYY 1887
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 864 EKDDREDQLVKAKEKLENDI-AEIMKMSGDNssQLTKMNDELRLKERSVEELQLKLTKANENASFLQKSIGEV--TLKAE 940
Cdd:TIGR01612 1888 SYKDEAEKIFINISKLANSInIQIQNNSGID--LFDNINIAILSSLDSEKEDTLKFIPSPEKEPEIYTKIRDSydTLLDI 1965
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 941 QSQQQAARKHEEEKKELEEKLLELEKKMETSyNQCQDLKakyekasSETKTKHEEILQNLQKML--ADTEDKLKAAQEAN 1018
Cdd:TIGR01612 1966 FKKSQDLHKKEQDTLNIIFENQQLYEKIQAS-NELKDTL-------SDLKYKKEKILNDVKLLLhkFDELNKLSCDSQNY 2037
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1019 RDLMQ--DMEELKTQAD---KAKAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNARLQNELDTLKENNLKTVEELNKS 1093
Cdd:TIGR01612 2038 DTILElsKQDKIKEKIDnyeKEKEKFGIDFDVKAMEEKFDNDIKDIEKFENNYKHSEKDNHDFSEEKDNIIQSKKKLKEL 2117
|
730
....*....|...
gi 1720414379 1094 KELLSVENQKMEE 1106
Cdd:TIGR01612 2118 TEAFNTEIKIIED 2130
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
1008-1134 |
4.54e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 41.30 E-value: 4.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1008 EDKLKAAQEANRDLMQD----MEELKtqadKAKAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNARLQNELDTLKENN 1083
Cdd:PRK12704 30 EAKIKEAEEEAKRILEEakkeAEAIK----KEALLEAKEEIHKLRNEFEKELRERRNELQKLEKRLLQKEENLDRKLELL 105
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 1720414379 1084 LKTVEELNKSKELLSVENQKMEEFKKEIETLKQAAAQKSQQLSALQEENVK 1134
Cdd:PRK12704 106 EKREEELEKKEKELEQKQQELEKKEEELEELIEEQLQELERISGLTAEEAK 156
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
788-1213 |
5.68e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 41.03 E-value: 5.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 788 LQDSLNQVNQVKETLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLhqkEEQFNVLSSELEKLRENLTDMEAKFKEKDD 867
Cdd:pfam07888 32 LQNRLEECLQERAELLQAQEAANRQREKEKERYKRDREQWERQRREL---ESRVAELKEELRQSREKHEELEEKYKELSA 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 868 REDQLVKAKEKLendiaeiMKMSGDNSSQLTKMNDELRLKERSVEELQLKLTKANENASFLQKSIGEVTLKAEQSQqqaa 947
Cdd:pfam07888 109 SSEELSEEKDAL-------LAQRAAHEARIRELEEDIKTLTQRVLERETELERMKERAKKAGAQRKEEEAERKQLQ---- 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 948 rkheeekkeleeklleleKKMETSYNQCQDLKAKYEKASSETKTKHEEILQnLQKMLADTEDKLKAAQEANRDLMQDMEE 1027
Cdd:pfam07888 178 ------------------AKLQQTEEELRSLSKEFQELRNSLAQRDTQVLQ-LQDTITTLTQKLTTAHRKEAENEALLEE 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1028 LKTQADKAKAAQTAEDAMqimeqmtKEKTETLASLEDTKQTN---ARLQNELDTLK--ENNLKTVEELNKSKELLSVENQ 1102
Cdd:pfam07888 239 LRSLQERLNASERKVEGL-------GEELSSMAAQRDRTQAElhqARLQAAQLTLQlaDASLALREGRARWAQERETLQQ 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1103 KMEEFKKEIETLKQAAAQKSQQLSALQEENVKLAEELGRTRDevtshqkleeersvlnnqllemkkslpSNTLRESEFRK 1182
Cdd:pfam07888 312 SAEADKDRIEKLSAELQRLEERLQEERMEREKLEVELGREKD---------------------------CNRVQLSESRR 364
|
410 420 430
....*....|....*....|....*....|.
gi 1720414379 1183 DADEEKASLQKSISLTSALLTEKDAELEKLR 1213
Cdd:pfam07888 365 ELQELKASLRVAQKEKEQLQAEKQELLEYIR 395
|
|
| HAP1_N |
pfam04849 |
HAP1 N-terminal conserved region; This family represents an N-terminal conserved region found ... |
1123-1298 |
6.21e-03 |
|
HAP1 N-terminal conserved region; This family represents an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologs. HAP1 binds to huntingtin in a polyglutamine repeat-length-dependent manner. However, its possible role in the pathogenesis of Huntington's disease is unclear. This family also includes a similar N-terminal conserved region from hypothetical protein products of ALS2CR3 genes found in the human juvenile amyotrophic lateral sclerosis critical region 2q33-2q34.
Pssm-ID: 461455 [Multi-domain] Cd Length: 309 Bit Score: 40.39 E-value: 6.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1123 QQLSALQEENVKLAEELGRTRDEVTshqKLEEERSvLNNQLLemkkSLPSNTLRESEF------RKDADEEKASLQKSIS 1196
Cdd:pfam04849 94 KQNSVLTERNEALEEQLGSAREEIL---QLRHELS-KKDDLL----QIYSNDAEESETesscstPLRRNESFSSLHGCVQ 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1197 LTsaLLTEKDAELE----KLRNEVTVLRGENATaksLHSVVQTLESDKVKlelkvknlelQLKENKRQLSSSSGNTDAQA 1272
Cdd:pfam04849 166 LD--ALQEKLRGLEeenlKLRSEASHLKTETDT---YEEKEQQLMSDCVE----------QLSEANQQMAELSEELARKM 230
|
170 180
....*....|....*....|....*.
gi 1720414379 1273 EEDERAQESqqmIDFLNSVIVDLQRK 1298
Cdd:pfam04849 231 EENLRQQEE---ITSLLAQIVDLQHK 253
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
997-1170 |
8.37e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 40.77 E-value: 8.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 997 LQNLQKMLADTEDKLKAAQEANR---------DLMQDMEELKTQADKAKAA-QTAEDAMQIMEQMTKEKTETLASLEDT- 1065
Cdd:COG3206 184 LPELRKELEEAEAALEEFRQKNGlvdlseeakLLLQQLSELESQLAEARAElAEAEARLAALRAQLGSGPDALPELLQSp 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1066 ---------KQTNARLQNELDTLKENNLKTVEELNKSKELLSVENQKMEEFKKEIETLKQAAAQKSQQLSALQEENVKLA 1136
Cdd:COG3206 264 viqqlraqlAELEAELAELSARYTPNHPDVIALRAQIAALRAQLQQEAQRILASLEAELEALQAREASLQAQLAQLEARL 343
|
170 180 190
....*....|....*....|....*....|....
gi 1720414379 1137 EELGRTRDEVtshQKLEEERSVLNNQLLEMKKSL 1170
Cdd:COG3206 344 AELPELEAEL---RRLEREVEVARELYESLLQRL 374
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
472-759 |
8.55e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 40.67 E-value: 8.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 472 LALRAQEVAELRRRLEsskppgdvdmslSLLQEISALQEKLEAihtdhqgeMTSLKEHFGAREEAFQKEIKalhtaTEKL 551
Cdd:COG4913 612 LAALEAELAELEEELA------------EAEERLEALEAELDA--------LQERREALQRLAEYSWDEID-----VASA 666
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 552 SKENESLRSKLDHANKENSDVIALwKSKLETAIASHQQAMEELKVsFSKGIGTDSAEFAELKTQIERLrldyQHEIESLQ 631
Cdd:COG4913 667 EREIAELEAELERLDASSDDLAAL-EEQLEELEAELEELEEELDE-LKGEIGRLEKELEQAEEELDEL----QDRLEAAE 740
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 632 SKQDSERSAHAKEM--ETMQAKLMKIIKEK-EDSLEAVKARLDSAEDQhLVEMEDTLNK-----LQEAEIKVKELEVLQA 703
Cdd:COG4913 741 DLARLELRALLEERfaAALGDAVERELRENlEERIDALRARLNRAEEE-LERAMRAFNRewpaeTADLDADLESLPEYLA 819
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1720414379 704 KYTEQSEvignftSQLSAVKEKLLDLdaLRKANSEgklELETLRQQLEGAEKQIKN 759
Cdd:COG4913 820 LLDRLEE------DGLPEYEERFKEL--LNENSIE---FVADLLSKLRRAIREIKE 864
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
987-1126 |
8.65e-03 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 39.95 E-value: 8.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 987 SETKTKHEEILQNLQKMLADTEDKLKAAQEANRDLMQDMEELK-----TQADKAKAAQTAEDAMQIMEQMTKEKTETLAS 1061
Cdd:PRK09039 45 SREISGKDSALDRLNSQIAELADLLSLERQGNQDLQDSVANLRaslsaAEAERSRLQALLAELAGAGAAAEGRAGELAQE 124
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1720414379 1062 LEDTKQTNARLQNELDTLKENNLKTVEELNKSKELLSVENQKMEEFKKEIETLKQ----AAAQKSQQLS 1126
Cdd:PRK09039 125 LDSEKQVSARALAQVELLNQQIAALRRQLAALEAALDASEKRDRESQAKIADLGRrlnvALAQRVQELN 193
|
|
| LXG |
pfam04740 |
LXG domain of WXG superfamily; This domain is present is the N-terminal region of a group of ... |
642-864 |
8.82e-03 |
|
LXG domain of WXG superfamily; This domain is present is the N-terminal region of a group of polymorphic toxin proteins in bacteria. It is predicted to use Type VII secretion pathway to mediate export of bacterial toxins.
Pssm-ID: 428100 [Multi-domain] Cd Length: 202 Bit Score: 39.15 E-value: 8.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 642 AKEMETMQAKLMKIIKEKEDSLEAVKARLdsaedQHLVEMEDTLNKlqEAEIKVKE-LEVLQAKYTEQ-SEVIGNFTSQL 719
Cdd:pfam04740 5 VSELIEGIDQTISELKELRDQLEKVKKAI-----EGLANLEDSLKG--KGGEAIKNfYSELHLPFLDFlQDFIDEYIEFL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 720 SAVKEKLLDLDAlrkaNSEGKLELETLRQQLEGAEKQIKNleternaesskansITKELQEKelvltgLQDSLNQVNQVK 799
Cdd:pfam04740 78 EQIKAALESFEP----SSNAFIDESFLEHELENGLKKAKE--------------KTEELTDE------INSILASVSDIV 133
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1720414379 800 ETLEKELQTLKEKFAStseeavsAQTRMQDTVNKLHQKEEQfnvLSSELEKLRENLTDMEAKFKE 864
Cdd:pfam04740 134 SLPKLSDSEVQDSLQK-------AKKKVKDTIEKLYDFDQE---QTSELSELEADLQALKTYVSE 188
|
|
| Borrelia_P83 |
pfam05262 |
Borrelia P83/100 protein; This family consists of several Borrelia P83/P100 antigen proteins. |
994-1158 |
9.05e-03 |
|
Borrelia P83/100 protein; This family consists of several Borrelia P83/P100 antigen proteins.
Pssm-ID: 114011 [Multi-domain] Cd Length: 489 Bit Score: 40.37 E-value: 9.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 994 EEILQNLQKMLADTEDKLKAAQEANRDLMQDMEELKTQADKA----KAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTN 1069
Cdd:pfam05262 188 EDNEKGVNFRRDMTDLKERESQEDAKRAQQLKEELDKKQIDAdkaqQKADFAQDNADKQRDEVRQKQQEAKNLPKPADTS 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 1070 ARLQNEldTLKENNLKTVEELNK-----SKELLSVENQKMEEFKKEIETLKQAAAQKSQQlsaLQEENVKLAEELGRTRD 1144
Cdd:pfam05262 268 SPKEDK--QVAENQKREIEKAQIeikknDEEALKAKDHKAFDLKQESKASEKEAEDKELE---AQKKREPVAEDLQKTKP 342
|
170
....*....|....
gi 1720414379 1145 EVTSHQKLEEERSV 1158
Cdd:pfam05262 343 QVEAQPTSLNEDAI 356
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
353-584 |
9.35e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 40.51 E-value: 9.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 353 QEALKEKQQHIEqllAERDLERAEVAKATSHVGEIEQELALARDGHDQHVLELEAKMDQLRTMVEAaDREKVELLNQLEE 432
Cdd:PTZ00121 1610 EEAKKAEEAKIK---AEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEE-DKKKAEEAKKAEE 1685
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720414379 433 EKRKVEDLQFRVEEESITKGDLEVATVSEKSRIMELEKDLALRAQEVAELRRRLESSKPPGDvdmslSLLQEISALQEKL 512
Cdd:PTZ00121 1686 DEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAE-----EAKKDEEEKKKIA 1760
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1720414379 513 EAIHTDHQGEMTSLKEHFGAREEAFQKEIKALHTATEKLSKENESLRSKLDHANKENSDVIALWKSKLETAI 584
Cdd:PTZ00121 1761 HLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIFDNFANIIEGGKEGNLVINDSKEMEDSAI 1832
|
|
| |
