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Conserved domains on  [gi|1907173523|ref|XP_036008197|]
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FANCD2 opposite strand protein isoform X2 [Mus musculus]

Protein Classification

FANCD2OS domain-containing protein( domain architecture ID 10633466)

FANCD2OS domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
FANCD2OS pfam15124
FANCD2 opposite strand protein; This family of proteins of unknown function gets its name from ...
25-200 4.24e-121

FANCD2 opposite strand protein; This family of proteins of unknown function gets its name from its position in the mammalian genome: Fanconi anemia group D2 protein opposite strand transcript protein.


:

Pssm-ID: 434479  Cd Length: 175  Bit Score: 339.85  E-value: 4.24e-121
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907173523  25 GYQLWSPWTPLDESFQWLRHTTPTPSSKHPFRASPCFPHTPSDLEVQLCLQEVTLVLDRPLVEPGESPKLPCHTSELRAV 104
Cdd:pfam15124   1 GYQLWSPWSPLDESLQWLRHTTPTRSSKHPFRGSPFFPVTPTDLEVQLCFQEVALVLDPPRLDAGESRPLAGHASEPKGI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907173523 105 SNKKGVvRKPQPVRLSGVDSVFGRVITAQPPKWTGTFRVSDKSAFCKIISREHQWPTGLKEPQVQMTVTMCKQMLRSILL 184
Cdd:pfam15124  81 TAANKI-RKPQPVRLIGLDSVFGRVITVQPPKWTGTFRVSEKSAFSKVISPEQQWPTGLKEPQIEMAMAMCKQMLRSILL 159
                         170
                  ....*....|....*.
gi 1907173523 185 LYATYKKCTFALQHSK 200
Cdd:pfam15124 160 LYAAYKKCTFALQHSK 175
 
Name Accession Description Interval E-value
FANCD2OS pfam15124
FANCD2 opposite strand protein; This family of proteins of unknown function gets its name from ...
25-200 4.24e-121

FANCD2 opposite strand protein; This family of proteins of unknown function gets its name from its position in the mammalian genome: Fanconi anemia group D2 protein opposite strand transcript protein.


Pssm-ID: 434479  Cd Length: 175  Bit Score: 339.85  E-value: 4.24e-121
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907173523  25 GYQLWSPWTPLDESFQWLRHTTPTPSSKHPFRASPCFPHTPSDLEVQLCLQEVTLVLDRPLVEPGESPKLPCHTSELRAV 104
Cdd:pfam15124   1 GYQLWSPWSPLDESLQWLRHTTPTRSSKHPFRGSPFFPVTPTDLEVQLCFQEVALVLDPPRLDAGESRPLAGHASEPKGI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907173523 105 SNKKGVvRKPQPVRLSGVDSVFGRVITAQPPKWTGTFRVSDKSAFCKIISREHQWPTGLKEPQVQMTVTMCKQMLRSILL 184
Cdd:pfam15124  81 TAANKI-RKPQPVRLIGLDSVFGRVITVQPPKWTGTFRVSEKSAFSKVISPEQQWPTGLKEPQIEMAMAMCKQMLRSILL 159
                         170
                  ....*....|....*.
gi 1907173523 185 LYATYKKCTFALQHSK 200
Cdd:pfam15124 160 LYAAYKKCTFALQHSK 175
 
Name Accession Description Interval E-value
FANCD2OS pfam15124
FANCD2 opposite strand protein; This family of proteins of unknown function gets its name from ...
25-200 4.24e-121

FANCD2 opposite strand protein; This family of proteins of unknown function gets its name from its position in the mammalian genome: Fanconi anemia group D2 protein opposite strand transcript protein.


Pssm-ID: 434479  Cd Length: 175  Bit Score: 339.85  E-value: 4.24e-121
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907173523  25 GYQLWSPWTPLDESFQWLRHTTPTPSSKHPFRASPCFPHTPSDLEVQLCLQEVTLVLDRPLVEPGESPKLPCHTSELRAV 104
Cdd:pfam15124   1 GYQLWSPWSPLDESLQWLRHTTPTRSSKHPFRGSPFFPVTPTDLEVQLCFQEVALVLDPPRLDAGESRPLAGHASEPKGI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907173523 105 SNKKGVvRKPQPVRLSGVDSVFGRVITAQPPKWTGTFRVSDKSAFCKIISREHQWPTGLKEPQVQMTVTMCKQMLRSILL 184
Cdd:pfam15124  81 TAANKI-RKPQPVRLIGLDSVFGRVITVQPPKWTGTFRVSEKSAFSKVISPEQQWPTGLKEPQIEMAMAMCKQMLRSILL 159
                         170
                  ....*....|....*.
gi 1907173523 185 LYATYKKCTFALQHSK 200
Cdd:pfam15124 160 LYAAYKKCTFALQHSK 175
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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