|
Name |
Accession |
Description |
Interval |
E-value |
| HX |
cd00094 |
Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. ... |
918-1179 |
2.05e-39 |
|
Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metalloproteinases (TIMPs). This CD contains 4 instances of the repeat.
Pssm-ID: 238046 [Multi-domain] Cd Length: 194 Bit Score: 145.15 E-value: 2.05e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 918 TNLCNGKPVDGLTTLRnGTLVAFRGHYFWMLNPFRPPSPPRRITEVW-GIPSPIDTVFTRCNcEGKTFFFKDSQYWRFTN 996
Cdd:cd00094 1 PDACDPLSFDAVTTLR-GELYFFKGRYFWRLSPGKPPGSPFLISSFWpSLPSPVDAAFERPD-TGKIYFFKGDKYWVYTG 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 997 DVVDPGYPKQIVK-GFGGLTGKIVAALSIAkykdRPESVYFFKrGGNIQQYTYKQEPMKKCTGRRPAinysvygeaaqvr 1075
Cdd:cd00094 79 KNLEPGYPKPISDlGFPPTVKQIDAALRWP----DNGKTYFFK-GDKYWRYDEKTQKMDPGYPKLIE------------- 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 1076 rrrferavgpfqthtfrihysvpmrvsyqdkgflhnevkvsTMWRGFPNVVTSAitlpnIRKPDGYdYYAFSKDQYYNID 1155
Cdd:cd00094 141 -----------------------------------------TDFPGVPDKVDAA-----FRWLDGY-YYFFKGDQYWRFD 173
|
250 260
....*....|....*....|....
gi 1907070833 1156 VPTRTARAITTRSGqtlSKIWYNC 1179
Cdd:cd00094 174 PRSKEVRVGYPLKI---SSDWLGC 194
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
405-720 |
1.94e-24 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 111.57 E-value: 1.94e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 405 STTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTtpkePEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPE 484
Cdd:PHA03247 2678 SPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPA----PHALVSATPLPPGPAAARQASPALPAAPAPP-AVPAGPATPG 2752
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 485 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPePTTLKEPEPTTPKEPEPTTPkEPE 564
Cdd:PHA03247 2753 GPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADP-PAAVLAPAAALPPAASPAGP-LPP 2830
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 565 PTTLKEPEPTTPKEPEPTTL------------KEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPttP 632
Cdd:PHA03247 2831 PTSAQPTAPPPPPGPPPPSLplggsvapggdvRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPER--P 2908
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 633 KEPEPTTPKEPEPTTPKEPEPTtpkePEPTTPKEPEPTTPKKPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPT- 710
Cdd:PHA03247 2909 PQPQAPPPPQPQPQPPPPPQPQ----PPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQpWLGALVPGRVAVPRFRVPQPAp 2984
|
330
....*....|
gi 1907070833 711 TRKEPEPTTP 720
Cdd:PHA03247 2985 SREAPASSTP 2994
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
408-914 |
5.35e-22 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 103.86 E-value: 5.35e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 408 RKEPEPTTPKEPEPTtpKEPEPTTPKEPE-PTTPKEPEPTTLKEPEPTTPKEPEPTT----PKEPEPTTPKEPEPTTPKE 482
Cdd:PHA03247 2481 RRPAEARFPFAAGAA--PDPGGGGPPDPDaPPAPSRLAPAILPDEPVGEPVHPRMLTwirgLEELASDDAGDPPPPLPPA 2558
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 483 PEPTTPKEPEPTTPKEPEPTTP----KEPEPTTPkePEPTTPKEP--EPTTPKEPEPTTPKEPEPTTLKEPEPTtpkePE 556
Cdd:PHA03247 2559 APPAAPDRSVPPPRPAPRPSEPavtsRARRPDAP--PQSARPRAPvdDRGDPRGPAPPSPLPPDTHAPDPPPPS----PS 2632
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 557 PTTPKEPEPTTLKEPEPTTPKE-PEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEP 635
Cdd:PHA03247 2633 PAANEPDPHPPPTVPPPERPRDdPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAP 2712
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 636 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEP 715
Cdd:PHA03247 2713 HALVSATPLPPGPAAARQASPALPAAPAPP-AVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASL 2791
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 716 EPTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTPASEDSDDSKTTLKPqkptk 795
Cdd:PHA03247 2792 SESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRP----- 2866
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 796 apkptkkptkapkkptstkkPKTPKTRKPKTTPSPLKTTSATPELNTTPLEVMLPTTTIPKQtPNPETAEVNPDHEDADG 875
Cdd:PHA03247 2867 --------------------PSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERP-PQPQAPPPPQPQPQPPP 2925
|
490 500 510
....*....|....*....|....*....|....*....
gi 1907070833 876 GEGEKPLIPGPPVLFPTAIPGTDLLAGRLNQGININPML 914
Cdd:PHA03247 2926 PPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWL 2964
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
330-778 |
4.96e-19 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 93.85 E-value: 4.96e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 330 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE-----PPPTTKKPEPTTPKEPEPTTPKEPEPTTTKEPEPTTTKEPE 404
Cdd:PHA03247 2502 GPPDPDAPPAPSRLAPAILPDEPVGEPVHPRMLTwirglEELASDDAGDPPPPLPPAAPPAAPDRSVPPPRPAPRPSEPA 2581
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 405 STTRKE-----PEPTTPKEP--EPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 477
Cdd:PHA03247 2582 VTSRARrpdapPQSARPRAPvdDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRV 2661
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 478 TTPKE-------------PEPTTPKEPEPTT--------PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP-EPTT 535
Cdd:PHA03247 2662 SRPRRarrlgraaqasspPQRPRRRAARPTVgsltsladPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPaAPAP 2741
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 536 PKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKE--PEPTTPKePEPTTLKEPEPTTPKEPEPTTTKEPESTtrkePEP 613
Cdd:PHA03247 2742 PAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAagPPRRLTR-PAVASLSESRESLPSPWDPADPPAAVLA----PAA 2816
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 614 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP-----------KEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKE 682
Cdd:PHA03247 2817 ALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPlggsvapggdvRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTE 2896
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 683 PEPTTPKEPEPttPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTA 762
Cdd:PHA03247 2897 SFALPPDQPER--PPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAV 2974
|
490
....*....|....*..
gi 1907070833 763 PAEEI-QNKPEETTPAS 778
Cdd:PHA03247 2975 PRFRVpQPAPSREAPAS 2991
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
612-728 |
6.23e-19 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 84.33 E-value: 6.23e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 612 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEP 691
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907070833 692 EPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTP 728
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
428-541 |
6.93e-19 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 83.95 E-value: 6.93e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 428 EPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 507
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....
gi 1907070833 508 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 541
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEP 120
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
420-536 |
6.93e-19 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 83.95 E-value: 6.93e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 420 EPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 499
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907070833 500 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 536
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
412-528 |
6.93e-19 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 83.95 E-value: 6.93e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 412 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 491
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907070833 492 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 528
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
620-736 |
7.06e-19 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 83.95 E-value: 7.06e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 620 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEP 699
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907070833 700 EPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTP 736
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
452-565 |
7.13e-19 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 83.95 E-value: 7.13e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 452 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 531
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....
gi 1907070833 532 EPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEP 565
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEP 120
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
468-581 |
3.56e-18 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 82.02 E-value: 3.56e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 468 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEP 547
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....
gi 1907070833 548 EPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEP 581
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEP 120
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
444-560 |
5.00e-18 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 81.64 E-value: 5.00e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 444 EPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 523
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907070833 524 EPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTP 560
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| Somatomedin_B |
pfam01033 |
Somatomedin B domain; |
28-65 |
6.16e-18 |
|
Somatomedin B domain;
Pssm-ID: 460034 Cd Length: 40 Bit Score: 78.11 E-value: 6.16e-18
10 20 30
....*....|....*....|....*....|....*...
gi 1907070833 28 SCKGRCFESFARGRECDCDSQCKQYGKCCADYDSFCEE 65
Cdd:pfam01033 2 SCKGRCGESFDRGRLCQCDDDCVKYGDCCPDYESLCLG 39
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
611-720 |
6.31e-18 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 81.25 E-value: 6.31e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 611 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKE 690
Cdd:pfam02389 14 QEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVPEPCHPKA 93
|
90 100 110
....*....|....*....|....*....|
gi 1907070833 691 PEPTTPKEPEPTTPKEPEPTTRKEPEPTTP 720
Cdd:pfam02389 94 PEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
411-520 |
7.02e-18 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 81.25 E-value: 7.02e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 411 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 490
Cdd:pfam02389 14 QEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVPEPCHPKA 93
|
90 100 110
....*....|....*....|....*....|
gi 1907070833 491 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 520
Cdd:pfam02389 94 PEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
588-704 |
7.22e-18 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 81.25 E-value: 7.22e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 588 EPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 667
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907070833 668 EPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 704
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| SO |
smart00201 |
Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from ... |
25-67 |
8.22e-18 |
|
Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from vitronectin, that is a growth hormone-dependent serum factor with protease-inhibiting activity.
Pssm-ID: 197571 Cd Length: 43 Bit Score: 77.80 E-value: 8.22e-18
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 1907070833 25 QELSCKGRCFESFARGRECDCDSQCKQYGKCCADYDSFCEEVH 67
Cdd:smart00201 1 AIGSCKGRCGESFNEGNACRCDALCLSYGDCCTDYESVCKKEV 43
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
484-597 |
1.78e-17 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 80.10 E-value: 1.78e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 484 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEP 563
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....
gi 1907070833 564 EPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEP 597
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEP 120
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
580-696 |
2.94e-17 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 79.33 E-value: 2.94e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 580 EPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 659
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907070833 660 EPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTP 696
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
457-576 |
8.79e-17 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 78.17 E-value: 8.79e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 457 KEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 536
Cdd:pfam02389 6 KQPCQPPP--QEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSP 83
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1907070833 537 KEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTP 576
Cdd:pfam02389 84 KVPEPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
433-552 |
9.23e-17 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 78.17 E-value: 9.23e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 433 KEPEPTTPKEPEPTTLKepEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 512
Cdd:pfam02389 6 KQPCQPPPQEPCVPTTK--EPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSP 83
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1907070833 513 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTP 552
Cdd:pfam02389 84 KVPEPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
492-604 |
9.87e-17 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 77.79 E-value: 9.87e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 492 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEP 571
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|...
gi 1907070833 572 EPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPE 604
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPE 119
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
548-664 |
1.07e-16 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 77.79 E-value: 1.07e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 548 EPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEP 627
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907070833 628 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 664
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
564-680 |
1.47e-16 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 77.40 E-value: 1.47e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 564 EPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 643
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907070833 644 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTP 680
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
407-732 |
4.10e-16 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 83.97 E-value: 4.10e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 407 TRKEPEPTTPKEP-EPTTPKEPE-PTTPKEP-EPTTPKEPEPTTLkepePTTPKEPE-PTTPKEP----EPTTPKEPE-P 477
Cdd:PTZ00449 576 SKKPEFPKDPKHPkDPEEPKKPKrPRSAQRPtRPKSPKLPELLDI----PKSPKRPEsPKSPKRPpppqRPSSPERPEgP 651
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 478 TTPKEPE-PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPePTTPKEPE 556
Cdd:PTZ00449 652 KIIKSPKpPKSPKPPFDPKFKEKFYDDYLDAAAKSKETKTTVVLDESFESILKETLPETPGTPFTTPRPLP-PKLPRDEE 730
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 557 P--TTPKEPEPTTLKEPEPTTPKEPEPTTLKEpepTTPKEPEPTTTKEPESTTRKEPEPTTPKEP--EPTTPKEPEPTTP 632
Cdd:PTZ00449 731 FpfEPIGDPDAEQPDDIEFFTPPEEERTFFHE---TPADTPLPDILAEEFKEEDIHAETGEPDEAmkRPDSPSEHEDKPP 807
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 633 KEpEPTTPKEPE-------PTTPKEPEP-TTPKEP--EPTTPKEPEP----TTPKKPEPTTPKEPEPTTPKEPEPTTPKE 698
Cdd:PTZ00449 808 GD-HPSLPKKRHrldglalSTTDLESDAgRIAKDAsgKIVKLKRSKSfddlTTVEEAEEMGAEARKIVVDDDGTEADDED 886
|
330 340 350
....*....|....*....|....*....|....
gi 1907070833 699 PEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPE 732
Cdd:PTZ00449 887 THPPEEKHKSEVRRRRPPKKPSKPKKPSKPKKPK 920
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
473-592 |
4.39e-16 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 76.25 E-value: 4.39e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 473 KEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTP 552
Cdd:pfam02389 6 KQPCQPPP--QEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSP 83
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1907070833 553 KEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTP 592
Cdd:pfam02389 84 KVPEPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
508-624 |
8.73e-16 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 75.09 E-value: 8.73e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 508 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEP 587
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907070833 588 EPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTP 624
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
524-640 |
9.62e-16 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 75.09 E-value: 9.62e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 524 EPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEP 603
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907070833 604 ESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 640
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
532-648 |
9.80e-16 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 75.09 E-value: 9.80e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 532 EPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEP 611
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907070833 612 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 648
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
540-656 |
1.08e-15 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 75.09 E-value: 1.08e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 540 EPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEP 619
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907070833 620 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 656
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
516-632 |
1.79e-15 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 74.32 E-value: 1.79e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 516 EPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEP 595
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907070833 596 EPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTP 632
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
409-504 |
3.69e-15 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 73.55 E-value: 3.69e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 409 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 488
Cdd:pfam02389 28 KVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVPEPCHPKAPEPCHPKVPEPCYP 107
|
90
....*....|....*.
gi 1907070833 489 KEPEPTTPKEPEPTTP 504
Cdd:pfam02389 108 KAPEPCQPKVPEPCPS 123
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
497-616 |
1.90e-14 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 71.24 E-value: 1.90e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 497 KEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTP 576
Cdd:pfam02389 6 KQPCQPPP--QEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSP 83
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1907070833 577 KEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTP 616
Cdd:pfam02389 84 KVPEPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
411-672 |
2.39e-14 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 78.44 E-value: 2.39e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 411 PEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEP----EPTTPKEPEPTTPKEPEPTTPKEPEPT 486
Cdd:PHA03247 2814 PAAALPPAASPAGP-LPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDvrrrPPSRSPAAKPAAPARPPVRRLARPAVS 2892
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 487 TPKEPEPTTPKEPEPttpkEPEPTTPKEPEPTTPKE----PEPTTPKEPEPTTPKEPEPTTLKEPEPtTPKEPEP----T 558
Cdd:PHA03247 2893 RSTESFALPPDQPER----PPQPQAPPPPQPQPQPPpppqPQPPPPPPPRPQPPLAPTTDPAGAGEP-SGAVPQPwlgaL 2967
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 559 TPKEPEPTTLKEPEPTTPKE-PEPTTlkepePTTPKEPEPTTTKEPESTTRKEpEPTTPKEPEPTTPKEPEPTTPKEPEP 637
Cdd:PHA03247 2968 VPGRVAVPRFRVPQPAPSREaPASST-----PPLTGHSLSRVSSWASSLALHE-ETDPPPVSLKQTLWPPDDTEDSDADS 3041
|
250 260 270
....*....|....*....|....*....|....*
gi 1907070833 638 TTPKEPEPTTPKEPEPTTPKEPEPTTpKEPEPTTP 672
Cdd:PHA03247 3042 LFDSDSERSDLEALDPLPPEPHDPFA-HEPDPATP 3075
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
433-738 |
4.13e-14 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 77.42 E-value: 4.13e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 433 KEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEptTPKE-PEPTTPKEPEPTtpKEPEPTT 511
Cdd:PTZ00449 490 KKSKKKLAPIEEEDSDKHDEPPEGPEASGLPPKAPGDKEGEEGEHEDSKESD--EPKEgGKPGETKEGEVG--KKPGPAK 565
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 512 PKEPEPTTPKEPEPTTPKEPE-PTTPKEPEpttlKEPEPTTPKEP-EPTTPKEPE----PTTLKEPE-PTTPKEP----E 580
Cdd:PTZ00449 566 EHKPSKIPTLSKKPEFPKDPKhPKDPEEPK----KPKRPRSAQRPtRPKSPKLPElldiPKSPKRPEsPKSPKRPpppqR 641
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 581 PTTLKEPE-PTTPKEPEPTTTKEP-----------------ESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPePTTPKE 642
Cdd:PTZ00449 642 PSSPERPEgPKIIKSPKPPKSPKPpfdpkfkekfyddyldaAAKSKETKTTVVLDESFESILKETLPETPGTP-FTTPRP 720
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 643 PEPTTPKEPEP--TTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKePEPTTPKEPEPTTPKEPEPTTRKEPEPTTP 720
Cdd:PTZ00449 721 LPPKLPRDEEFpfEPIGDPDAEQPDDIEFFTPPEEERTFFHETPADTPL-PDILAEEFKEEDIHAETGEPDEAMKRPDSP 799
|
330
....*....|....*...
gi 1907070833 721 KEPEPTTPKEpEPTTPKK 738
Cdd:PTZ00449 800 SEHEDKPPGD-HPSLPKK 816
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
195-728 |
6.21e-14 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 77.29 E-value: 6.21e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 195 PttphskvttspkttAAKPVTPKPSLAPNSETSKEASLAsnkettvetkettatnkqssaskkktTSAKETRSaektsdk 274
Cdd:PHA03247 2557 P--------------AAPPAAPDRSVPPPRPAPRPSEPA--------------------------VTSRARRP------- 2589
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 275 DVEPTSTTPKNSAPTTTKKPVTTTKEPvpttpkepepttpkepppttkkpepttpkepepttpkepeptTPKEPEPTTPK 354
Cdd:PHA03247 2590 DAPPQSARPRAPVDDRGDPRGPAPPSP------------------------------------------LPPDTHAPDPP 2627
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 355 EPEPTTPKEPPPTTKKPEPTTPKEPEPTTPKEPEPTTTKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKE 434
Cdd:PHA03247 2628 PPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPT 2707
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 435 PEPttpkEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 514
Cdd:PHA03247 2708 PEP----APHALVSATPLPPGPAAARQASPALPAAPAPP-AVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRR 2782
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 515 PEPTTPKEPEPTTPKEPEPTTPKEPePTTLKEPEPTTPKEPEPTTPkEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKE 594
Cdd:PHA03247 2783 LTRPAVASLSESRESLPSPWDPADP-PAAVLAPAAALPPAASPAGP-LPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGG 2860
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 595 P----EPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPttPKEPEPTTPKEPEPTTPKEPEPTtpkePEPT 670
Cdd:PHA03247 2861 DvrrrPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPER--PPQPQAPPPPQPQPQPPPPPQPQ----PPPP 2934
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 671 TPKKPEPTTPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTRKEPEPTTPKE-PEPTTP 728
Cdd:PHA03247 2935 PPPRPQPPLAPTTDPAGAGEPSGAVPQpWLGALVPGRVAVPRFRVPQPAPSREaPASSTP 2994
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
405-764 |
1.14e-13 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 75.19 E-value: 1.14e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 405 STTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTP-------KEPEPTTPKEPEPTTPKEPEP 477
Cdd:NF033839 153 SGSSTKPETPQPENPEHQKPTTPAPDTKPSPQPEGKKPSVPDINQEKEKAKLavatymsKILDDIQKHHLQKEKHRQIVA 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 478 TTPKEPEPTTPKEPEPTTPK---EPEPTTPK------EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPE 548
Cdd:NF033839 233 LIKELDELKKQALSEIDNVNtkvEIENTVHKifadmdAVVTKFKKGLTQDTPKEPGNKKPSAPKPGMQPSPQPEKKEVKP 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 549 PTTPKEPEpTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPE-PTTTKEPESTTRKEPEPTTPKEPEPTTPKEP 627
Cdd:NF033839 313 EPETPKPE-VKPQLEKPKPEVKPQPEKPKPEVKPQLETPKPEVKPQPEkPKPEVKPQPEKPKPEVKPQPETPKPEVKPQP 391
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 628 EPTTPK-EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP-KEPEPTTPKKPEPTTPKEPEPTTPkePEPTTPKEPEPTTPK 705
Cdd:NF033839 392 EKPKPEvKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPeVKPQPEKPKPEVKPQPEKPKPEVK--PQPETPKPEVKPQPE 469
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070833 706 EPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPA 764
Cdd:NF033839 470 KPKPEVKPQPEKPKPDNSKPQADDKKPSTPNNLSKDKQPSNQASTNEKATNKPKKSLPS 528
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
412-814 |
1.45e-13 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 75.50 E-value: 1.45e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 412 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEpttlKEPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKEPE--PTTP 488
Cdd:PTZ00449 501 EEDSDKHDEPPEGPEASGLPPKAPGDKEGEEGE----HEDSKESDEPKEGGKPGEtKEGEVGKKPGPAKEHKPSkiPTLS 576
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 489 KEPE-PTTPKEP-EPTTPKEPE-PTTPKEP-EPTTPKEPE----PTTPKEPE-PTTPKEPEPTTlkepEPTTPKEPE-PT 558
Cdd:PTZ00449 577 KKPEfPKDPKHPkDPEEPKKPKrPRSAQRPtRPKSPKLPElldiPKSPKRPEsPKSPKRPPPPQ----RPSSPERPEgPK 652
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 559 TPKEPEPttlkepePTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPePTTPKEPEPT 638
Cdd:PTZ00449 653 IIKSPKP-------PKSPKPPFDPKFKEKFYDDYLDAAAKSKETKTTVVLDESFESILKETLPETPGTP-FTTPRPLPPK 724
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 639 TPKEPEP--TTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP-KEPEPTTRKEP 715
Cdd:PTZ00449 725 LPRDEEFpfEPIGDPDAEQPDDIEFFTPPEEERTFFHETPADTPLPDILAEEFKEEDIHAETGEPDEAmKRPDSPSEHED 804
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 716 EPTTPKEPEPTTPKEPE----PTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTPASE---DSD----DS 784
Cdd:PTZ00449 805 KPPGDHPSLPKKRHRLDglalSTTDLESDAGRIAKDASGKIVKLKRSKSFDDLTTVEEAEEMGAEARKivvDDDgteaDD 884
|
410 420 430
....*....|....*....|....*....|
gi 1907070833 785 KTTLKPQKPTKAPKPTKKPTKAPKKPTSTK 814
Cdd:PTZ00449 885 EDTHPPEEKHKSEVRRRRPPKKPSKPKKPS 914
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
484-710 |
5.98e-13 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 73.58 E-value: 5.98e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 484 EPTTPKEPEPTTPKEP-EPTTPKEPEPTtPKEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKE 562
Cdd:PRK10263 338 EPVTQTPPVASVDVPPaQPTVAWQPVPG-PQTGEPVIAPAPEGYPQ-QSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQP 415
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 563 PEPTTLKEPEPTTPKEPEPTtlkePEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 642
Cdd:PRK10263 416 AQQPYYAPAPEQPAQQPYYA----PAPEQPVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPVVE 491
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907070833 643 PEP----TTPKEPEPTTPKEPEPTTPKEPEPTTP-KKPEPTTPKEPEPTTPKEPEPTTPKEPepttPKEPEPT 710
Cdd:PRK10263 492 PEPvveeTKPARPPLYYFEEVEEKRAREREQLAAwYQPIPEPVKEPEPIKSSLKAPSVAAVP----PVEAAAA 560
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
417-733 |
2.10e-12 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 72.13 E-value: 2.10e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 417 KEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT--PKEPEPTTPKE---- 490
Cdd:PHA03307 59 AAACDRFEPPTGPP-PGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTppPASPPPSPAPDlsem 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 491 --PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTL 568
Cdd:PHA03307 138 lrPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASA 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 569 KEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPE----PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 644
Cdd:PHA03307 218 SSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPApitlPTRIWEASGWNGPSSRPGPASSSSSPRERSPS 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 645 PTTPKEPEPTTPKEPEPTTPKEPEPTT-PKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEP 723
Cdd:PHA03307 298 PSPSSPGSGPAPSSPRASSSSSSSRESsSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSS 377
|
330
....*....|
gi 1907070833 724 EPTTPKEPEP 733
Cdd:PHA03307 378 PAASAGRPTR 387
|
|
| HX |
smart00120 |
Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. ... |
970-1014 |
3.45e-12 |
|
Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metalloproteinases (TIMPs).
Pssm-ID: 214524 [Multi-domain] Cd Length: 45 Bit Score: 61.87 E-value: 3.45e-12
10 20 30 40
....*....|....*....|....*....|....*....|....*
gi 1907070833 970 IDTVFTRCNceGKTFFFKDSQYWRFTNDVVDPGYPKQIVKGFGGL 1014
Cdd:smart00120 1 IDAAFELRD--GKTYFFKGDKYWRFDPKRVDPGYPKLISSFFPGL 43
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
452-686 |
5.40e-12 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 70.50 E-value: 5.40e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 452 EPTTPKEPEPTTPKEP-EPTTPKEPEPTtPKEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 530
Cdd:PRK10263 338 EPVTQTPPVASVDVPPaQPTVAWQPVPG-PQTGEPVIAPAPEGYPQ-QSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQP 415
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 531 PEPTTPKEPEPTTLKEPEPTtpkePEPTTPKEPEPTTLKEPEPttPKEPEPTTLKEPEPTTPKEPEPTTTKEPEsttrKE 610
Cdd:PRK10263 416 AQQPYYAPAPEQPAQQPYYA----PAPEQPVAGNAWQAEEQQS--TFAPQSTYQTEQTYQQPAAQEPLYQQPQP----VE 485
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070833 611 PEPTTPKEP--EPTTPKEPEPTTPKEPEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTPKKPepttPKEPEPT 686
Cdd:PRK10263 486 QQPVVEPEPvvEETKPARPPLYYFEEVEEKRAREREQLAAwYQPIPEPVKEPEPIKSSLKAPSVAAVP----PVEAAAA 560
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
468-694 |
8.04e-12 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 70.11 E-value: 8.04e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 468 EPTTPKEPEPTTPKEP-EPTTPKEPEPTtPKEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKE 546
Cdd:PRK10263 338 EPVTQTPPVASVDVPPaQPTVAWQPVPG-PQTGEPVIAPAPEGYPQ-QSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQP 415
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 547 PEPTTPKEPEPTTPKEPEPTtlkePEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKE 626
Cdd:PRK10263 416 AQQPYYAPAPEQPAQQPYYA----PAPEQPVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPVVE 491
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907070833 627 PEP----TTPKEPEPTTPKEPEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKKPEPTTPKEPepttPKEPEPT 694
Cdd:PRK10263 492 PEPvveeTKPARPPLYYFEEVEEKRAREREQLAAwYQPIPEPVKEPEPIKSSLKAPSVAAVP----PVEAAAA 560
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
411-732 |
3.91e-11 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 67.70 E-value: 3.91e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 411 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPttlKEPEPTTPKEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKE 490
Cdd:PRK07764 415 AAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAP---AGGAPSPPPAAAPSAQPAPAPAAA--PEPTAAPAPAPPAAPA 489
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 491 PEPTTPKEPEPTTP------------------------------KEPEPT-----------------------TPKEPE- 516
Cdd:PRK07764 490 PAAAPAAPAAPAAPagaddaatlrerwpeilaavpkrsrktwaiLLPEATvlgvrgdtlvlgfstgglarrfaSPGNAEv 569
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 517 -------------------PTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEP-TTPKEPEPTTLKEPEPTTP 576
Cdd:PRK07764 570 lvtalaeelggdwqveavvGPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPaGAAAAPAEASAAPAPGVAA 649
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 577 KEPEPTTLKEPEPTTPKEPEPtttkePESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 656
Cdd:PRK07764 650 PEHHPKHVAVPDASDGGDGWP-----AKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQA 724
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070833 657 KEPEPTTPKEPEPTTPKKPEPTTPKEPEPtTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTP---KEPEPTTPKEPE 732
Cdd:PRK07764 725 AQGASAPSPAADDPVPLPPEPDDPPDPAG-APAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEddaPSMDDEDRRDAE 802
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
410-733 |
4.01e-11 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 67.32 E-value: 4.01e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 410 EPEPT-TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkePEPTTP 488
Cdd:PRK07764 405 APAAApAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPS---PAGNAPAGGAPSPPPAAAPSAQPAPAPAAA--PEPTAA 479
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 489 KEPEPTTPKEPEPTTPKEPEPTTP------------------------------KEPEPT-------------------- 518
Cdd:PRK07764 480 PAPAPPAAPAPAAAPAAPAAPAAPagaddaatlrerwpeilaavpkrsrktwaiLLPEATvlgvrgdtlvlgfstgglar 559
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 519 ---TPKEPE--------------------PTTPKEPEPTTPKEPEPttlKEPEPTTPKEPEPTTPKEPEPTtlkePEPTT 575
Cdd:PRK07764 560 rfaSPGNAEvlvtalaeelggdwqveavvGPAPGAAGGEGPPAPAS---SGPPEEAARPAAPAAPAAPAAP----APAGA 632
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 576 PKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKE---PEPTTPKEPEPTTPKEPEPTTPKEPE 652
Cdd:PRK07764 633 AAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPapaPAAPAAPAGAAPAQPAPAPAATPPAG 712
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 653 PTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPE 732
Cdd:PRK07764 713 QADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAPS 792
|
.
gi 1907070833 733 P 733
Cdd:PRK07764 793 M 793
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
458-772 |
6.41e-11 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 66.33 E-value: 6.41e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 458 EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 537
Cdd:NF033839 158 KPETPQPENPEHQKPTTPAPDTKPSPQPEGKKPSVPDINQEKEKAKL-AVATYMSKILDDIQKHHLQKEKHRQIVALIKE 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 538 EPEPTTLKEPEPTTPK-EPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTP 616
Cdd:NF033839 237 LDELKKQALSEIDNVNtKVEIENTVHKIFADMDAVVTKFKKGLTQDTPKEPGNKKPSAPKPGMQPSPQPEKKEVKPEPET 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 617 KEPEpTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK-EPEPTTPKKPEPTTPKEPEPTTPKEPEPTT 695
Cdd:NF033839 317 PKPE-VKPQLEKPKPEVKPQPEKPKPEVKPQLETPKPEVKPQPEKPKPEvKPQPEKPKPEVKPQPETPKPEVKPQPEKPK 395
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070833 696 PK-EPEPTTPKEPEPTTRKEPEPTTPKEPEPTTP-KEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPE 772
Cdd:NF033839 396 PEvKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPeVKPQPEKPKPEVKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPE 474
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
456-697 |
1.17e-10 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 65.72 E-value: 1.17e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 456 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEptTPKEPEPTTPKEPEPTTPKEP-EPTTPKEPEPTTPKEPEPT----TPKE 530
Cdd:PLN03209 330 PKESDAADGPKPVPTKPVTPEAPSPPIEE--EPPQPKAVVPRPLSPYTAYEDlKPPTSPIPTPPSSSPASSKsvdaVAKP 407
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 531 PEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKE 610
Cdd:PLN03209 408 AEPDVVPSPGSASNVPEVEPAQVEAKKTRPLSPYARYEDLKPPTSPSPTAPTGVSPSVSSTSSVPAVPDTAPATAATDAA 487
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 611 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTP--KEPEPTTP 688
Cdd:PLN03209 488 APPPANMRPLSPYAVYDDLKPPTSPSPAAPVGKVAPSSTNEVVKVGNSAPPTALADEQHHAQPKPRPLSPytMYEDLKPP 567
|
....*....
gi 1907070833 689 KEPEPTTPK 697
Cdd:PLN03209 568 TSPTPSPVL 576
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
413-736 |
2.42e-10 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 65.01 E-value: 2.42e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 413 PTTPKEPEPTTPKEPEPTTPKEPEPTtPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPkepEPTTPKEPEPTTPKEPE 492
Cdd:PRK07764 386 GVAGGAGAPAAAAPSAAAAAPAAAPA-PAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSP---AGNAPAGGAPSPPPAAA 461
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 493 PTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTP------------------------------KEPEPT 542
Cdd:PRK07764 462 PSAQPAPAPAAA--PEPTAAPAPAPPAAPAPAAAPAAPAAPAAPagaddaatlrerwpeilaavpkrsrktwaiLLPEAT 539
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 543 ---------TLKEPEP----------------------------------TTPKEPEPTTPKEPE----PTTLKEPEPTT 575
Cdd:PRK07764 540 vlgvrgdtlVLGFSTGglarrfaspgnaevlvtalaeelggdwqveavvgPAPGAAGGEGPPAPAssgpPEEAARPAAPA 619
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 576 PKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 655
Cdd:PRK07764 620 APAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPA 699
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 656 PKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEP-------TTPKEPEPTTRKEPEPTTPKEPEPTTP 728
Cdd:PRK07764 700 QPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPddppdpaGAPAQPPPPPAPAPAAAPAAAPPPSPP 779
|
....*...
gi 1907070833 729 KEPEPTTP 736
Cdd:PRK07764 780 SEEEEMAE 787
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
446-777 |
3.26e-10 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 64.70 E-value: 3.26e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 446 TTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 525
Cdd:PHA03378 522 ATLLPPSPPQPRAGRRAPCVYTEDLDIESDEPASTEPVHDQLLPAPGLG-PLQIQPLTSPTTSQLASSAPSYAQTPWPVP 600
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 526 TTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEP---EPTTLKEPEPTTPKEPEPTTTKE 602
Cdd:PHA03378 601 HPSQTPEPPTTQSHIPETSAPRQWPMPLRPIPMRPLRMQPITFNVLVFPTPHQPpqvEITPYKPTWTQIGHIPYQPSPTG 680
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 603 PESTTRKEPEPTTPKEPepttPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKE 682
Cdd:PHA03378 681 ANTMLPIQWAPGTMQPP----PRAPTPMRPPAAPPGRAQRPAAATGRARPPAAAPGRARPPAAAPGRARPPAAAPGRARP 756
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 683 PEPT-TPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVT 761
Cdd:PHA03378 757 PAAApGRARPPAAAPGAPTPQPPPQAPPAPQQRPRGAPTPQPPPQAGPTSMQLMPRAAPGQQGPTKQILRQLLTGGVKRG 836
|
330
....*....|....*.
gi 1907070833 762 APAEEIQNKPEETTPA 777
Cdd:PHA03378 837 RPSLKKPAALERQAAA 852
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
405-716 |
3.29e-10 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 64.62 E-value: 3.29e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 405 STTRKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP- 483
Cdd:PRK07764 419 AAAAPAPAAAPQPAPAPA-PAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAp 497
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 484 -EPTTP------------------------------KEPEPT-----------------------TPKEPE--------- 500
Cdd:PRK07764 498 aAPAAPagaddaatlrerwpeilaavpkrsrktwaiLLPEATvlgvrgdtlvlgfstgglarrfaSPGNAEvlvtalaee 577
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 501 -----------PTTPKEPEPTTPKEPEPTTPKE--PEPTTPKEPEPTTPKEPEPTTlKEPEPTTPKEPEPTTPKEPEPTT 567
Cdd:PRK07764 578 lggdwqveavvGPAPGAAGGEGPPAPASSGPPEeaARPAAPAAPAAPAAPAPAGAA-AAPAEASAAPAPGVAAPEHHPKH 656
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 568 LKEPEPTTPKEPEPTTLKEPEPTTPKEPEPtttkePESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 647
Cdd:PRK07764 657 VAVPDASDGGDGWPAKAGGAAPAAPPPAPA-----PAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAP 731
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907070833 648 PKEPEPTTPKEPEPTTPKEPEPtTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP---KEPEPTTRKEPE 716
Cdd:PRK07764 732 SPAADDPVPLPPEPDDPPDPAG-APAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEddaPSMDDEDRRDAE 802
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
421-786 |
3.96e-10 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 64.24 E-value: 3.96e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 421 PTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 500
Cdd:PRK07764 386 GVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQ 465
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 501 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTP----------------KEPEPtTPKEPE 564
Cdd:PRK07764 466 PAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAATLRERWPeilaavpkrsrktwaiLLPEA-TVLGVR 544
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 565 PTTL----------------KEPE--------------------PTTPKEPEPTTLKEPEPTTPKE--PEPTTTKEPEST 606
Cdd:PRK07764 545 GDTLvlgfstgglarrfaspGNAEvlvtalaeelggdwqveavvGPAPGAAGGEGPPAPASSGPPEeaARPAAPAAPAAP 624
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 607 TRKEPePTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE-PEPTTPKKPEPTTPKEPEP 685
Cdd:PRK07764 625 AAPAP-AGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPaPAPAAPAAPAGAAPAQPAP 703
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 686 TTPKEPEPTTPKEPEPTTPKEPEPTTRKePEPTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAE 765
Cdd:PRK07764 704 APAATPPAGQADDPAAQPPQAAQGASAP-SPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEE 782
|
410 420
....*....|....*....|.
gi 1907070833 766 EIQNKPEETTPASEDSDDSKT 786
Cdd:PRK07764 783 EEMAEDDAPSMDDEDRRDAEE 803
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
504-693 |
5.68e-10 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 63.44 E-value: 5.68e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 504 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTlkEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTT 583
Cdd:PRK14948 363 AFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAAT--TPSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLN 440
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 584 LKEPEPTTPKEPEPTTTK------------EPESTT-----------------------------------RKEPEPTTP 616
Cdd:PRK14948 441 LEELWQQILAKLELPSTRmllsqqaelvslDSNRAViavspnwlgmvqsrkplleqafakvlgrsiklnleSQSGSASNT 520
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070833 617 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKePEPTTPKEPEP 693
Cdd:PRK14948 521 AKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPT-PSPTKDSSPEE 596
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
488-669 |
5.78e-10 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 63.44 E-value: 5.78e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 488 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkePEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTT 567
Cdd:PRK14948 363 AFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATT--PSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLN 440
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 568 LKE---------PEPTT-------------------------------PKEPEPTT---------------LKEPEPTTP 592
Cdd:PRK14948 441 LEElwqqilaklELPSTrmllsqqaelvsldsnraviavspnwlgmvqSRKPLLEQafakvlgrsiklnleSQSGSASNT 520
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070833 593 KEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPEP 669
Cdd:PRK14948 521 AKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPT-PSPTKDSSPEE 596
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
411-738 |
6.25e-10 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 64.04 E-value: 6.25e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 411 PEPTTPKEPEPTTPKEPEPTTpkePEPTTPKEPEPTTLKEPEPTTPKEPEPttpkePEPTTPKEPEPTTPKEPEPTTPKE 490
Cdd:PHA03307 100 PAREGSPTPPGPSSPDPPPPT---PPPASPPPSPAPDLSEMLRPVGSPGPP-----PAASPPAAGASPAAVASDAASSRQ 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 491 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKE 570
Cdd:PHA03307 172 AALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGP 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 571 PEPTTPKEPEPTTLKEP--EPTTPKEPEPTTTKEPESTTRKEPEPttpkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 648
Cdd:PHA03307 252 ENECPLPRPAPITLPTRiwEASGWNGPSSRPGPASSSSSPRERSP----SPSPSSPGSGPAPSSPRASSSSSSSRESSSS 327
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 649 KePEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP--TTRKEPEPTTPKEPEPT 726
Cdd:PHA03307 328 S-TSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRrrARAAVAGRARRRDATGR 406
|
330
....*....|..
gi 1907070833 727 TPKEPEPTTPKK 738
Cdd:PHA03307 407 FPAGRPRPSPLD 418
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
548-736 |
6.39e-10 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 63.95 E-value: 6.39e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 548 EPTTPKEPEPTTPKEP-EPTTLKEPEPTtPKEPEPTTLKEPEPTTPkEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKE 626
Cdd:PRK10263 338 EPVTQTPPVASVDVPPaQPTVAWQPVPG-PQTGEPVIAPAPEGYPQ-QSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQP 415
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 627 PE----PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPttPKEPEPT---TPKKPEPTTPKEPE-PTTPKEPEPTTPKE 698
Cdd:PRK10263 416 AQqpyyAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQS--TFAPQSTyqtEQTYQQPAAQEPLYqQPQPVEQQPVVEPE 493
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1907070833 699 P--EPTTPKEP---------EPTTRKEPEPTTPKEPEPTTPKEPEPTTP 736
Cdd:PRK10263 494 PvvEETKPARPplyyfeeveEKRAREREQLAAWYQPIPEPVKEPEPIKS 542
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
432-610 |
7.69e-10 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 62.96 E-value: 7.69e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 432 PKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 511
Cdd:PRK07994 361 PAAPLPEPEVPPQSAA---PAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATK 437
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 512 PKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTLkePEPTTPKEPEPTTPKEPEPTtlKEPEPTTPKEPEPTTLKEpeptt 591
Cdd:PRK07994 438 AKKSEPAAASRARPV-NSALERLASVRPAPSAL--EKAPAKKEAYRWKATNPVEV--KKEPVATPKALKKALEHE----- 507
|
170
....*....|....*....
gi 1907070833 592 pKEPEPTTTKEPESTTRKE 610
Cdd:PRK07994 508 -KTPELAAKLAAEAIERDP 525
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
464-653 |
7.87e-10 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 63.06 E-value: 7.87e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 464 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 543
Cdd:PRK14948 363 AFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATT--PSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLN 440
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 544 LKE---------PEPTT-------------------------------PKEPEPTTPKEP---EPTTL----KEPEPTTP 576
Cdd:PRK14948 441 LEElwqqilaklELPSTrmllsqqaelvsldsnraviavspnwlgmvqSRKPLLEQAFAKvlgRSIKLnlesQSGSASNT 520
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070833 577 KEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPEP 653
Cdd:PRK14948 521 AKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPT-PSPTKDSSPEE 596
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
504-736 |
1.04e-09 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 62.64 E-value: 1.04e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 504 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEptTPKEPEPTTLKEPEPTTPKEP-EPTTPKEPEPTTLKEPEPTtpkePEPT 582
Cdd:PLN03209 330 PKESDAADGPKPVPTKPVTPEAPSPPIEE--EPPQPKAVVPRPLSPYTAYEDlKPPTSPIPTPPSSSPASSK----SVDA 403
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 583 TLKEPEPTTPKEPEPTTT---KEPESTTRKEPEPTTP--KEPEPTTPKEPEPTTPKEPEPTTPKepEPTTPKEPEPTTPK 657
Cdd:PLN03209 404 VAKPAEPDVVPSPGSASNvpeVEPAQVEAKKTRPLSPyaRYEDLKPPTSPSPTAPTGVSPSVSS--TSSVPAVPDTAPAT 481
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070833 658 EPEPTTPKEPEPTTPKKPEPTTPKEPEPTTpkePEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTP 736
Cdd:PLN03209 482 AATDAAAPPPANMRPLSPYAVYDDLKPPTS---PSPAAPVGKVAPSSTNEVVKVGNSAPPTALADEQHHAQPKPRPLSP 557
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
466-847 |
1.09e-09 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 62.48 E-value: 1.09e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 466 EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLK 545
Cdd:NF033839 158 KPETPQPENPEHQKPTTPAPDTKPSPQPEGKKPSVPDINQEKEKAKL-AVATYMSKILDDIQKHHLQKEKHRQIVALIKE 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 546 EPEPTTPKEPEPTTPK-EPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTP 624
Cdd:NF033839 237 LDELKKQALSEIDNVNtKVEIENTVHKIFADMDAVVTKFKKGLTQDTPKEPGNKKPSAPKPGMQPSPQPEKKEVKPEPET 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 625 KEPEpTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK-KPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 703
Cdd:NF033839 317 PKPE-VKPQLEKPKPEVKPQPEKPKPEVKPQLETPKPEVKPQPEKPKPEvKPQPEKPKPEVKPQPETPKPEVKPQPEKPK 395
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 704 PK-EPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTaPAEEIQNKPEETTPASEDSD 782
Cdd:NF033839 396 PEvKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVK-PQPETPKPEVKPQPEKPKPE 474
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1907070833 783 DSKTTLKPQKPTKAPKPTKKPTKAPKKPTSTKKPKTPKTRKPKTTPSPLKTTSATPELNTTPLEV 847
Cdd:NF033839 475 VKPQPEKPKPDNSKPQADDKKPSTPNNLSKDKQPSNQASTNEKATNKPKKSLPSTGSISNLALEI 539
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
424-573 |
1.21e-09 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 62.58 E-value: 1.21e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 424 PKEPEPTTPKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 503
Cdd:PRK07994 361 PAAPLPEPEVPPQSAAPAASAQAT---AAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATK 437
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907070833 504 PKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTT----PKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEP 573
Cdd:PRK07994 438 AKKSEPAAASRARPV-NSALERLASVRPAPSAlekaPAKKEAYRWKATNPVEVKKEPVATPKALKKALEHEKTP 510
|
|
| Hemopexin |
pfam00045 |
Hemopexin; Hemopexin is a heme-binding protein that transports heme to the liver. ... |
970-1007 |
1.63e-09 |
|
Hemopexin; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metallopeptidases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metallopeptidases (TIMPs).
Pssm-ID: 395000 [Multi-domain] Cd Length: 44 Bit Score: 54.49 E-value: 1.63e-09
10 20 30
....*....|....*....|....*....|....*...
gi 1907070833 970 IDTVFTRCNceGKTFFFKDSQYWRFTNDVVDPGYPKQI 1007
Cdd:pfam00045 1 IDAAFEDRD--GKTYFFKGRKYWRFDPQRVEPGYPKLI 36
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
410-736 |
2.84e-09 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 61.73 E-value: 2.84e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 410 EPEPTTPKEPEPTT--PKEPEPTTPKEPEPTTPKEPEPTtlKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 487
Cdd:PHA03307 107 TPPGPSSPDPPPPTppPASPPPSPAPDLSEMLRPVGSPG--PPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETAR 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 488 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTT 567
Cdd:PHA03307 185 APSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPIT 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 568 LKEP--EPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpkepeP 645
Cdd:PHA03307 265 LPTRiwEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRG-----A 339
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 646 TTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEP--TTPKEPEPTTPKE-PEPTTRKEPEPTTPKE 722
Cdd:PHA03307 340 AVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRrrARAAVAGRARRRDaTGRFPAGRPRPSPLDA 419
|
330
....*....|....
gi 1907070833 723 PEptTPKEPEPTTP 736
Cdd:PHA03307 420 GA--ASGAFYARYP 431
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
459-626 |
3.38e-09 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 61.03 E-value: 3.38e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 459 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP-KEPEPTTPKEPEPTTP--KEPEPTTPKEPEPTT 535
Cdd:PRK07994 366 PEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPaVPLPETTSQLLAARQQlqRAQGATKAKKSEPAA 445
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 536 PKEPEPTTlKEPEPTTPKEPEPTTPkePEPTTLKEPEPTTPKEPEPTtlKEPEPTTPKEPEPTTTKEpesttrKEPEPTT 615
Cdd:PRK07994 446 ASRARPVN-SALERLASVRPAPSAL--EKAPAKKEAYRWKATNPVEV--KKEPVATPKALKKALEHE------KTPELAA 514
|
170
....*....|.
gi 1907070833 616 PKEPEPTTPKE 626
Cdd:PRK07994 515 KLAAEAIERDP 525
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
411-736 |
3.38e-09 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 61.16 E-value: 3.38e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 411 PEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTPk 489
Cdd:PRK07764 396 AAAPSAAAAAPA-AAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNApAGGAPSPPPAAAPSAQPAPAPAAA- 473
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 490 ePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP-------------TTPKEPEPTTP-KEPEPT---------TLKE 546
Cdd:PRK07764 474 -PEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDaatlrerwpeilaAVPKRSRKTWAiLLPEATvlgvrgdtlVLGF 552
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 547 PEP----------------------------------TTPKEPEPTTPKEPEPTTLKE--PEPTTPKEPEPTtlkePEPT 590
Cdd:PRK07764 553 STGglarrfaspgnaevlvtalaeelggdwqveavvgPAPGAAGGEGPPAPASSGPPEeaARPAAPAAPAAP----AAPA 628
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 591 TPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPT 670
Cdd:PRK07764 629 PAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPA--PAAPAAPAGAAPAQPAPAPA 706
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907070833 671 TPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP-------TTRKEPEPTTPKEPEPTTPKEPEPTTP 736
Cdd:PRK07764 707 ATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPddppdpaGAPAQPPPPPAPAPAAAPAAAPPPSPP 779
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
628-714 |
4.05e-09 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 60.97 E-value: 4.05e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 628 EPTTPKEPEPTTPKEPEPTTPKepepttPKEPEPTTPKEPEPTTPKKPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPKEP 707
Cdd:PRK15313 559 EPDEPIIPDPVDPVIPDPVIPD------PVDPDPVDPVIPDPVIPDPVDPD-PVDPEPVDPVIPDPTIPDIGQSDTPPIT 631
|
....*..
gi 1907070833 708 EPTTRKE 714
Cdd:PRK15313 632 EHQFRPE 638
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
541-736 |
4.30e-09 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 60.66 E-value: 4.30e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 541 PTTLKEPEPTTPKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPE 620
Cdd:PRK12323 375 ATAAAAPVAQPAPAAAAPAAAAPAPAA---PPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPA 451
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 621 PTTPKEPEPTTP---KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEP--TTPKEPEPTTPKEPEPTT 695
Cdd:PRK12323 452 PAPAAAPAAAARpaaAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPaqPDAAPAGWVAESIPDPAT 531
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 1907070833 696 PKEPEPTTPKEPEPTTRKEPEPTTPKEPE--PTTPKEPEPTTP 736
Cdd:PRK12323 532 ADPDDAFETLAPAPAAAPAPRAAAATEPVvaPRPPRASASGLP 574
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
528-709 |
5.27e-09 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 60.36 E-value: 5.27e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 528 PKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTlkEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTT 607
Cdd:PRK14948 363 AFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAAT--TPSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLN 440
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 608 RKE---------PEPTT-------------------------------PKEPEPTTP---------------KEPEPTTP 632
Cdd:PRK14948 441 LEElwqqilaklELPSTrmllsqqaelvsldsnraviavspnwlgmvqSRKPLLEQAfakvlgrsiklnlesQSGSASNT 520
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070833 633 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPEP 709
Cdd:PRK14948 521 AKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPT-PSPTKDSSPEE 596
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
405-736 |
5.55e-09 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 60.57 E-value: 5.55e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 405 STTRKEPEPTTPKEPEPTTPKE--PEPTTPKEPEPTTPKEPEPTTLKEPE----PTTPKEPEPTTPKEPEPTTPKEPEPT 478
Cdd:PHA03307 112 SSPDPPPPTPPPASPPPSPAPDlsEMLRPVGSPGPPPAASPPAAGASPAAvasdAASSRQAALPLSSPEETARAPSSPPA 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 479 TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEP--E 556
Cdd:PHA03307 192 EPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRiwE 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 557 PTTPKEPEPTTLKEPEPTTPKEPEPttlkEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKePEPTTPKEPEPTTPKEPE 636
Cdd:PHA03307 272 ASGWNGPSSRPGPASSSSSPRERSP----SPSPSSPGSGPAPSSPRASSSSSSSRESSSSS-TSSSSESSRGAAVSPGPS 346
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 637 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEP--TTPKEPEPTTPKEPEPTTPKEPEPTTPkepePTTRKE 714
Cdd:PHA03307 347 PSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRrrARAAVAGRARRRDATGRFPAGRPRPSP----LDAGAA 422
|
330 340
....*....|....*....|..
gi 1907070833 715 PEPTTPKEPEPTTPKEPEPTTP 736
Cdd:PHA03307 423 SGAFYARYPLLTPSGEPWPGSP 444
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
612-701 |
9.47e-09 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 59.81 E-value: 9.47e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 612 EPTTPKEPEPTTPKEPEPTTPKepepttPKEPEPTTPKEPEPTTPKEPEPtTPKEPEPTTPKKPEPTTPKEPEPTTPkep 691
Cdd:PRK15313 559 EPDEPIIPDPVDPVIPDPVIPD------PVDPDPVDPVIPDPVIPDPVDP-DPVDPEPVDPVIPDPTIPDIGQSDTP--- 628
|
90
....*....|
gi 1907070833 692 ePTTPKEPEP 701
Cdd:PRK15313 629 -PITEHQFRP 637
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
452-541 |
1.10e-08 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 59.81 E-value: 1.10e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 452 EPTTPKEPEPTTPKEPEPTTPKepepttPKEPEPTTPKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPkep 531
Cdd:PRK15313 559 EPDEPIIPDPVDPVIPDPVIPD------PVDPDPVDPVIPDPVIPDPVDPD-PVDPEPVDPVIPDPTIPDIGQSDTP--- 628
|
90
....*....|
gi 1907070833 532 ePTTPKEPEP 541
Cdd:PRK15313 629 -PITEHQFRP 637
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
432-719 |
1.15e-08 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 59.95 E-value: 1.15e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 432 PKEPEPTTPKEPEPTTLK-EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP---KEPEPTTPKEPEPTTPKEP 507
Cdd:PHA03247 206 PSGPGPAAPADLTAAALHlYGASETYLQDEPFVERRVVISHPLRGDIAAPAPPPVVGEgadRAPETARGATGPPPPPEAA 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 508 EPTTPKEPEP---------TTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKePEPTTPKEPEPTTLKEPEPTTPKE 578
Cdd:PHA03247 286 APNGAAAPPDgvwgaalagAPLALPAPPDPPPPAPAGDAEEEDDEDGAMEVVSPL-PRPRQHYPLGFPKRRRPTWTPPSS 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 579 PEPTTLKEPEPttPKEPEPTTTKEpesTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPepttpkEPEPTTPKE 658
Cdd:PHA03247 365 LEDLSAGRHHP--KRASLPTRKRR---SARHAATPFARGPGGDDQTRPAAPVPASVPTPAPTPVP------ASAPPPPAT 433
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907070833 659 PEPTtpkePEPTTPKKPEPTtpkePEPTTPKEPEPTTPKEPEPTTPKEPEP-TTRKEPEPTT 719
Cdd:PHA03247 434 PLPS----AEPGSDDGPAPP----PERQPPAPATEPAPDDPDDATRKALDAlRERRPPEPPG 487
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
493-696 |
1.42e-08 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 59.12 E-value: 1.42e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 493 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTPKEPEPTTLKEPE 572
Cdd:PRK12323 375 ATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPAR---RSPAPEALAAARQASARGPGGAPAPA 451
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 573 PTTPKEPEPTTlkepePTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEP--TTPKEPEPTTPKE 650
Cdd:PRK12323 452 PAPAAAPAAAA-----RPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPaqPDAAPAGWVAESI 526
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1907070833 651 PEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPE--PTTPKEPEPTTP 696
Cdd:PRK12323 527 PDPATADPDDAFETLAPAPAAAPAPRAAAATEPVvaPRPPRASASGLP 574
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
413-611 |
1.79e-08 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 58.73 E-value: 1.79e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 413 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 492
Cdd:PRK12323 375 ATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAA---PAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPA 451
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 493 PTTPKEPEPTTP---KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEP--TTPKEPEPTTPKEPEPTT 567
Cdd:PRK12323 452 PAPAAAPAAAARpaaAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPaqPDAAPAGWVAESIPDPAT 531
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 1907070833 568 LKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEP 611
Cdd:PRK12323 532 ADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPD 575
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
416-657 |
1.87e-08 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 58.40 E-value: 1.87e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 416 PKEPEPTTPKEPEPTTPKepePTTPKEPEPTTLKEPEPTTPKEPEPTTP-------KEPEPTTPKEPEPTTPKEPEPTTP 488
Cdd:PLN03209 328 VPPKESDAADGPKPVPTK---PVTPEAPSPPIEEEPPQPKAVVPRPLSPytayedlKPPTSPIPTPPSSSPASSKSVDAV 404
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 489 KEP-EPTTPKEPEPTT---PKEPEPTTPKEPEPTTP--KEPEPTTPKEPEPTTPKEPEPTTLKepEPTTPKEPEPTTPKE 562
Cdd:PLN03209 405 AKPaEPDVVPSPGSASnvpEVEPAQVEAKKTRPLSPyaRYEDLKPPTSPSPTAPTGVSPSVSS--TSSVPAVPDTAPATA 482
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 563 PEPTTLKEPEPTTPKEPEPTTLKEPEPTTpkePEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP-- 640
Cdd:PLN03209 483 ATDAAAPPPANMRPLSPYAVYDDLKPPTS---PSPAAPVGKVAPSSTNEVVKVGNSAPPTALADEQHHAQPKPRPLSPyt 559
|
250
....*....|....*..
gi 1907070833 641 KEPEPTTPKEPEPTTPK 657
Cdd:PLN03209 560 MYEDLKPPTSPTPSPVL 576
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
472-642 |
1.92e-08 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 58.72 E-value: 1.92e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 472 PKEPEPTTPKEPEPTTPKEPEPTTPkepEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTT 551
Cdd:PRK07994 361 PAAPLPEPEVPPQSAAPAASAQATA---APTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATK 437
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 552 PKEPEPTTPKEPEPTTlKEPEPTTPKEPEPTTLkePEPTTPKEPEPTTTKEPESTtrKEPEPTTPKEPEP--TTPKEPEP 629
Cdd:PRK07994 438 AKKSEPAAASRARPVN-SALERLASVRPAPSAL--EKAPAKKEAYRWKATNPVEV--KKEPVATPKALKKalEHEKTPEL 512
|
170
....*....|...
gi 1907070833 630 TTPKEPEPTTPKE 642
Cdd:PRK07994 513 AAKLAAEAIERDP 525
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
620-709 |
2.08e-08 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 58.66 E-value: 2.08e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 620 EPTTPKEPEPTTPKEPEPTTPKepepttPKEPEPTTPKEPEPTTPKEPEPtTPKKPEPTTPKEPEPTTPKEPEPTTPkep 699
Cdd:PRK15313 559 EPDEPIIPDPVDPVIPDPVIPD------PVDPDPVDPVIPDPVIPDPVDP-DPVDPEPVDPVIPDPTIPDIGQSDTP--- 628
|
90
....*....|
gi 1907070833 700 ePTTPKEPEP 709
Cdd:PRK15313 629 -PITEHQFRP 637
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
552-722 |
2.39e-08 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 58.34 E-value: 2.39e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 552 PKEPEPTTPKEPEPTTlkepePTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTP--KEPEP 629
Cdd:PRK07994 361 PAAPLPEPEVPPQSAA-----PAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQlqRAQGA 435
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 630 TTPKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKEPepttPKKPEPTTPKEPEPTTPKEPEPTTPKEPEP--TTPKEP 707
Cdd:PRK07994 436 TKAKKSEPAAASRARPV-NSALERLASVRPAPSALEKA----PAKKEAYRWKATNPVEVKKEPVATPKALKKalEHEKTP 510
|
170
....*....|....*
gi 1907070833 708 EPTTRKEPEPTTPKE 722
Cdd:PRK07994 511 ELAAKLAAEAIERDP 525
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
509-704 |
2.52e-08 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 58.35 E-value: 2.52e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 509 PTTPKEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTtlKEPE 588
Cdd:PRK12323 375 ATAAAAPVAQPAPAAAAPAAAAPAPAAP-PAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGA--PAPA 451
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 589 PTTPKEPEPTT---TKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP--TTPKEPEPTTPKEPEPTT 663
Cdd:PRK12323 452 PAPAAAPAAAArpaAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPaqPDAAPAGWVAESIPDPAT 531
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 1907070833 664 PKEPEPTTPKKPEPTTPKEPEPTTPKEPE--PTTPKEPEPTTP 704
Cdd:PRK12323 532 ADPDDAFETLAPAPAAAPAPRAAAATEPVvaPRPPRASASGLP 574
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
445-656 |
2.58e-08 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 58.35 E-value: 2.58e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 445 PTTLKEPEPTTPKEPEPTTPKEPEPTTPkepEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 524
Cdd:PRK12323 375 ATAAAAPVAQPAPAAAAPAAAAPAPAAP---PAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPA 451
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 525 PTTPKEPEPTTPKEPEPttlkePEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPE 604
Cdd:PRK12323 452 PAPAAAPAAAARPAAAG-----PRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESI 526
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1907070833 605 STTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkepePTTPKEPEPTTP 656
Cdd:PRK12323 527 PDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVA----PRPPRASASGLP 574
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
536-714 |
2.68e-08 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 57.95 E-value: 2.68e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 536 PKEPEPTTlkePEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTT 615
Cdd:PRK07994 361 PAAPLPEP---EVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATK 437
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 616 PKEPEPTTPKEPEPtTPKEPEPTTPKEPEPTTPKEPepttPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEpeptt 695
Cdd:PRK07994 438 AKKSEPAAASRARP-VNSALERLASVRPAPSALEKA----PAKKEAYRWKATNPVEVKKEPVATPKALKKALEHE----- 507
|
170
....*....|....*....
gi 1907070833 696 pKEPEPTTPKEPEPTTRKE 714
Cdd:PRK07994 508 -KTPELAAKLAAEAIERDP 525
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
461-632 |
3.06e-08 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 58.13 E-value: 3.06e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 461 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpkEPEPTTPKEPEPTTpkEPEPTTPKEPEPTTPkEPE 540
Cdd:PRK10811 846 PVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVV--EAVAEVVEEPVVVA--EPQPEEVVVVETTHP-EVI 920
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 541 PTTLKEPEPTTPKEPEPTTPKEPEpttlkEPEPTTPKEPEPTTLKEPEPTTPKEP-EPTTTKEPESTTRKEPEPTTPKEP 619
Cdd:PRK10811 921 AAPVTEQPQVITESDVAVAQEVAE-----HAEPVVEPQDETADIEEAAETAEVVVaEPEVVAQPAAPVVAEVAAEVETVT 995
|
170
....*....|...
gi 1907070833 620 EPTTPKEPEPTTP 632
Cdd:PRK10811 996 AVEPEVAPAQVPE 1008
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
520-698 |
3.28e-08 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 57.95 E-value: 3.28e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 520 PKEPEPTTPKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTT 599
Cdd:PRK07994 361 PAAPLPEPEVPPQSAAPAASAQAT---AAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATK 437
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 600 TKEPESTTRKEPEPtTPKEPEPTTPKEPEPTTPKEPepttPKEPEPTTPKEPEPTTPKEPEPTTPKEPepttpkKPEPTT 679
Cdd:PRK07994 438 AKKSEPAAASRARP-VNSALERLASVRPAPSALEKA----PAKKEAYRWKATNPVEVKKEPVATPKAL------KKALEH 506
|
170
....*....|....*....
gi 1907070833 680 PKEPEPTTPKEPEPTTPKE 698
Cdd:PRK07994 507 EKTPELAAKLAAEAIERDP 525
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
411-586 |
3.38e-08 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 57.67 E-value: 3.38e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 411 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTlkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 490
Cdd:PRK14948 366 SEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAAT--TPSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLNLEE 443
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 491 ---------PEPTT------------------------------------------------------PKEPEPTTPKEP 507
Cdd:PRK14948 444 lwqqilaklELPSTrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnleSQSGSASNTAKT 523
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070833 508 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKE 586
Cdd:PRK14948 524 PPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTA---TQASSNAPAQIPADSSPPPPIPEEPTPSPTKDSSPEEIDK 599
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
488-658 |
3.80e-08 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 57.57 E-value: 3.80e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 488 PKEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPttlkEPEPTTPKEPEPTTP--KEPEP 565
Cdd:PRK07994 361 PAAPLPEPEVPPQSAAPAASAQATA-APTAAVAPPQAPAVPPPPASAPQQAPAV----PLPETTSQLLAARQQlqRAQGA 435
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 566 TTLKEPEPTTPKEPEPTTlKEPEPTTPKEPEPTTTkePESTTRKEPEPTTPKEPEPTtpKEPEPTTPKEPEP--TTPKEP 643
Cdd:PRK07994 436 TKAKKSEPAAASRARPVN-SALERLASVRPAPSAL--EKAPAKKEAYRWKATNPVEV--KKEPVATPKALKKalEHEKTP 510
|
170
....*....|....*
gi 1907070833 644 EPTTPKEPEPTTPKE 658
Cdd:PRK07994 511 ELAAKLAAEAIERDP 525
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
459-547 |
4.00e-08 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 57.98 E-value: 4.00e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 459 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEpttPKE 538
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAA---AVE 114
|
....*....
gi 1907070833 539 PEPTTLKEP 547
Cdd:PRK12270 115 DEVTPLRGA 123
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
421-735 |
4.45e-08 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 57.28 E-value: 4.45e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 421 PTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTT--PKEPEPTTPKEPEPTTPKEPEPTTPKE 498
Cdd:pfam17823 115 LAAAASSSPSSAAQSLPAAIAALPSEAFSAPRAAACRANASAAPRAAIAAAsaPHAASPAPRTAASSTTAASSTTAASSA 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 499 PEPTTPKEPEPTTPKEPEPTTPK---EPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTT 575
Cdd:pfam17823 195 PTTAASSAPATLTPARGISTAATatgHPAAGTALAAVGNSSPAAGTVTAAVGTVTPAALATLAAAAGTVASAAGTINMGD 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 576 PKEPEPTTLKE-PEPTTPKEPEPTTTKEPESTTRKepepTTPKEPEPTTPKEPEPT-TPKEPEPTTPKEPEPTTPKEPEP 653
Cdd:pfam17823 275 PHARRLSPAKHmPSDTMARNPAAPMGAQAQGPIIQ----VSTDQPVHNTAGEPTPSpSNTTLEPNTPKSVASTNLAVVTT 350
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 654 TTPKEPEPTTPKEPEPTTPKKPE-----PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTP 728
Cdd:pfam17823 351 TKAQAKEPSASPVPVLHTSMIPEveatsPTTQPSPLLPTQGAAGPGILLAPEQVATEATAGTASAGPTPRSSGDPKTLAM 430
|
....*..
gi 1907070833 729 KEPEPTT 735
Cdd:pfam17823 431 ASCQLST 437
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
627-706 |
4.66e-08 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 57.59 E-value: 4.66e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 627 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 706
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
636-717 |
4.95e-08 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 57.50 E-value: 4.95e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 636 EPTTPKEPEPTTPKEPEPTTPKepepttPKEPEPTTPKKPEPTTPKEPEPtTPKEPEPTTPKEPEPTTP----KEPEPTT 711
Cdd:PRK15313 559 EPDEPIIPDPVDPVIPDPVIPD------PVDPDPVDPVIPDPVIPDPVDP-DPVDPEPVDPVIPDPTIPdigqSDTPPIT 631
|
....*.
gi 1907070833 712 RKEPEP 717
Cdd:PRK15313 632 EHQFRP 637
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
587-733 |
4.99e-08 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 57.18 E-value: 4.99e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 587 PEPTTPKEP-EPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP--KEPEPTTPKEPEPTT 663
Cdd:PRK07994 366 PEPEVPPQSaAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQlqRAQGATKAKKSEPAA 445
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 664 PKEPEPtTPKKPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPTtrKEPEPTTPKEPEPTTPKEPEP 733
Cdd:PRK07994 446 ASRARP-VNSALERLASVRPAPSAL--EKAPAKKEAYRWKATNPVEV--KKEPVATPKALKKALEHEKTP 510
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
652-736 |
5.04e-08 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 57.50 E-value: 5.04e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 652 EPTTPKEPEPTTPKEPEPTTPKkpepttPKEPEPTTPKEPEPTTPKepepttPKEPEPTtrkEPEPTTPKEPEPTTPKEP 731
Cdd:PRK15313 559 EPDEPIIPDPVDPVIPDPVIPD------PVDPDPVDPVIPDPVIPD------PVDPDPV---DPEPVDPVIPDPTIPDIG 623
|
....*
gi 1907070833 732 EPTTP 736
Cdd:PRK15313 624 QSDTP 628
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
619-698 |
5.24e-08 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 57.59 E-value: 5.24e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 619 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKE 698
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
504-672 |
5.67e-08 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 57.18 E-value: 5.67e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 504 PKEPEPTTPKEPEPTTPKEPEPTTPkepEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTT 583
Cdd:PRK07994 361 PAAPLPEPEVPPQSAAPAASAQATA---APTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATK 437
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 584 LKEPEPTTPKEPEPTTTkEPESTTRKEPEPTTPKEPepttPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP--TTPKEPEP 661
Cdd:PRK07994 438 AKKSEPAAASRARPVNS-ALERLASVRPAPSALEKA----PAKKEAYRWKATNPVEVKKEPVATPKALKKalEHEKTPEL 512
|
170
....*....|.
gi 1907070833 662 TTPKEPEPTTP 672
Cdd:PRK07994 513 AAKLAAEAIER 523
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
407-603 |
6.08e-08 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 57.36 E-value: 6.08e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 407 TRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTlkEPEPTTPKEPEPTTpkEPEPTTPKEPEPTTPKEPEPT 486
Cdd:PRK10811 848 VRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVV--EAVAEVVEEPVVVA--EPQPEEVVVVETTHPEVIAAP 923
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 487 TPKEPEPTTpkepEPTTPKEPEptTPKEPEPTTPKEPEPTTPKEPEPTTPKEP-EPTTLKEPEPTTPKEPEPTTPKEPep 565
Cdd:PRK10811 924 VTEQPQVIT----ESDVAVAQE--VAEHAEPVVEPQDETADIEEAAETAEVVVaEPEVVAQPAAPVVAEVAAEVETVT-- 995
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 1907070833 566 ttlKEPEPTTPKEPEPTTLKEPEPTTP--KEPEPTTTKEP 603
Cdd:PRK10811 996 ---AVEPEVAPAQVPEATVEHNHATAPmtRAPAPEYVPEA 1032
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
428-517 |
6.12e-08 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 57.12 E-value: 6.12e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 428 EPTTPKEPEPTTPKEPEPTTlkePEPTtpkEPEPTTPKEPEPTTPKEPEPtTPKEPEPTTPKEPEPTTPKEPEPTTPkep 507
Cdd:PRK15313 559 EPDEPIIPDPVDPVIPDPVI---PDPV---DPDPVDPVIPDPVIPDPVDP-DPVDPEPVDPVIPDPTIPDIGQSDTP--- 628
|
90
....*....|
gi 1907070833 508 ePTTPKEPEP 517
Cdd:PRK15313 629 -PITEHQFRP 637
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
420-509 |
6.12e-08 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 57.12 E-value: 6.12e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 420 EPTTPKEPEPTTPKEPEPTTPkepEPTtlkEPEPTTPKEPEPTTPKEPEPtTPKEPEPTTPKEPEPTTPKEPEPTTPkep 499
Cdd:PRK15313 559 EPDEPIIPDPVDPVIPDPVIP---DPV---DPDPVDPVIPDPVIPDPVDP-DPVDPEPVDPVIPDPTIPDIGQSDTP--- 628
|
90
....*....|
gi 1907070833 500 ePTTPKEPEP 509
Cdd:PRK15313 629 -PITEHQFRP 637
|
|
| PRK08691 |
PRK08691 |
DNA polymerase III subunits gamma and tau; Validated |
564-783 |
6.27e-08 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 57.03 E-value: 6.27e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 564 EPTTLKEPEPTTPKEPepTTLKEPEPTtpkePEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 643
Cdd:PRK08691 373 ENTELQSPSAQTAEKE--TAAKKPQPR----PEAETAQTPVQTASAAAMPSEGKTAGPVSNQENNDVPPWEDAPDEAQTA 446
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 644 EPTTPKePEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEpepttpkEPEPTTRKEPEPTTPKEP 723
Cdd:PRK08691 447 AGTAQT-SAKSIQTASEAETPPENQVSKNKAADNETDAPLSEVPSENPIQATPND-------EAVETETFAHEAPAEPFY 518
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 724 EPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTPASEDSDD 783
Cdd:PRK08691 519 GYGFPDNDCPPEDGAEIPPPDWEHAAPADTAGGGADEEAEAGGIGGNNTPSAPPPEFSTE 578
|
|
| MSCRAMM_ClfB |
NF033845 |
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial ... |
416-689 |
6.45e-08 |
|
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468203 [Multi-domain] Cd Length: 871 Bit Score: 57.27 E-value: 6.45e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 416 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTtlKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 495
Cdd:NF033845 543 PKDPTPGPPVDPEPSPEPEPEPTPDPEPSPD--PDPEPSPDPDPDSDSDSDSGSDSDSGSDSDSDSDSDSDSDSDSDSDS 620
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 496 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTT 575
Cdd:NF033845 621 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 700
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 576 PKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 655
Cdd:NF033845 701 SSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 780
|
250 260 270
....*....|....*....|....*....|....
gi 1907070833 656 PKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPK 689
Cdd:NF033845 781 DSDSDSDSDSDSDSDSDSRVTPPNNEQKAPSNPK 814
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
592-734 |
6.85e-08 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 56.80 E-value: 6.85e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 592 PKEPEPTTTKEPESTTrkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 671
Cdd:PRK07994 361 PAAPLPEPEVPPQSAA---PAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATK 437
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070833 672 PKKPEPTTPKEPEPtTPKEPEPTTPKEPEPTT----PKEPEPTTRKEPEPTTPKEPEPTTPKEPEPT 734
Cdd:PRK07994 438 AKKSEPAAASRARP-VNSALERLASVRPAPSAlekaPAKKEAYRWKATNPVEVKKEPVATPKALKKA 503
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
418-560 |
6.85e-08 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 55.93 E-value: 6.85e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 418 EPEPTTPKEPEPTTPKE---PEPTTPKEPEPTTLKEPEPTTPKEPEPT-TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 493
Cdd:NF040712 189 DPDFGRPLRPLATVPRLarePADARPEEVEPAPAAEGAPATDSDPAEAgTPDDLASARRRRAGVEQPEDEPVGPGAAPAA 268
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 494 ttpkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTP---KEPEPTTP 560
Cdd:NF040712 269 ----EPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKpkrRRRRASVP 334
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
451-637 |
8.22e-08 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 56.51 E-value: 8.22e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 451 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 530
Cdd:PRK14948 366 SEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATT--PSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLNLEE 443
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 531 ---------PEPTTPK-----------EPEPTTL------------KEPEPTTP---------------KEPEPTTPKEP 563
Cdd:PRK14948 444 lwqqilaklELPSTRMllsqqaelvslDSNRAVIavspnwlgmvqsRKPLLEQAfakvlgrsiklnlesQSGSASNTAKT 523
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907070833 564 EPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKePEPTTPKEPEP 637
Cdd:PRK14948 524 PPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPT-PSPTKDSSPEE 596
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
469-680 |
9.61e-08 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 56.42 E-value: 9.61e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 469 PTTPKEPEPTTPKEPEPTTPKEPEPTTPkepEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPE 548
Cdd:PRK12323 375 ATAAAAPVAQPAPAAAAPAAAAPAPAAP---PAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPA 451
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 549 PTTPKEPEPTTP---KEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPEsttrkePEPTTPKEPEPTTPK 625
Cdd:PRK12323 452 PAPAAAPAAAARpaaAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPA------PAQPDAAPAGWVAES 525
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 1907070833 626 EPEPTTPKEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPkepePTTPKKPEPTTP 680
Cdd:PRK12323 526 IPDPATADPDDAFETLAPAPAAA--PAPRAAAATEPVVA----PRPPRASASGLP 574
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
411-541 |
9.64e-08 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 56.41 E-value: 9.64e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 411 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPtTPKEPEPTTPKE 490
Cdd:PRK07994 385 AAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKKSEPAAASRARP-VNSALERLASVR 463
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 1907070833 491 PEPTTPKEPepttPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 541
Cdd:PRK07994 464 PAPSALEKA----PAKKEAYRWKATNPVEVKKEPVATPKALKKALEHEKTP 510
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
410-669 |
9.66e-08 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 56.40 E-value: 9.66e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 410 EPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 489
Cdd:PRK07003 359 EPAVTGGGAPGGGVPARVAGAVPA-PGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATAD 437
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 490 EPEPTTPKePEPTTPKEPEPTTPKEPEPttPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPttlk 569
Cdd:PRK07003 438 RGDDAADG-DAPVPAKANARASADSRCD--ERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDA---- 510
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 570 EPEPTTPKEPEPTTLKEPEPTTPkEPEPTTTKEPE-------------------STTRKEPEPTTPKePEPTTPKEPEPT 630
Cdd:PRK07003 511 RAPAAASREDAPAAAAPPAPEAR-PPTPAAAAPAAraggaaaaldvlrnagmrvSSDRGARAAAAAK-PAAAPAAAPKPA 588
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 1907070833 631 TPKEPEPT-TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 669
Cdd:PRK07003 589 APRVAVQVpTPRARAATGDAPPNGAARAEQAAESRGAPPP 628
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
466-616 |
9.76e-08 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 55.54 E-value: 9.76e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 466 EPEPTTPKEPEPTTPKE---PEPTTPKEPEPTTPKEPEPTTPKEPEPT-TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 541
Cdd:NF040712 189 DPDFGRPLRPLATVPRLarePADARPEEVEPAPAAEGAPATDSDPAEAgTPDDLASARRRRAGVEQPEDEPVGPGAAPAA 268
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1907070833 542 ttlkEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTlkEPEPTTPKEPEPTTTKEPestTRKEPEPTTP 616
Cdd:NF040712 269 ----EPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPA--APEAEEPARPEPPPAPKP---KRRRRRASVP 334
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
575-728 |
9.76e-08 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 55.54 E-value: 9.76e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 575 TPKEPEPTTLKEPEPTTPKEPEPTTTKE---PESTTRKEPEPTTPKEPEPTTPKEPEPT-TPKEPEPTTPKEPEPTTPKE 650
Cdd:NF040712 178 TALDDEARWLIDPDFGRPLRPLATVPRLarePADARPEEVEPAPAAEGAPATDSDPAEAgTPDDLASARRRRAGVEQPED 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 651 PEPTTPKEPEPttpkEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTP---KEPEPTT 727
Cdd:NF040712 258 EPVGPGAAPAA----EPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKpkrRRRRASV 333
|
.
gi 1907070833 728 P 728
Cdd:NF040712 334 P 334
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
525-728 |
1.05e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 56.42 E-value: 1.05e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 525 PTTPKEPEPTTPKEPEPTTLKEPEPTTPkepEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPE 604
Cdd:PRK12323 375 ATAAAAPVAQPAPAAAAPAAAAPAPAAP---PAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPA 451
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 605 STTRKEPEPTTP---KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP--TTPKEPEPTTPKKPEPTT 679
Cdd:PRK12323 452 PAPAAAPAAAARpaaAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPaqPDAAPAGWVAESIPDPAT 531
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1907070833 680 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTtrkepePTTPKEPEPTTP 728
Cdd:PRK12323 532 ADPDDAFETLAPAPAAAPAPRAAAATEPVVA------PRPPRASASGLP 574
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
480-650 |
1.05e-07 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 56.03 E-value: 1.05e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 480 PKEPEPTTPKEPEPTTPKEPEPTTPkepEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTT 559
Cdd:PRK07994 361 PAAPLPEPEVPPQSAAPAASAQATA---APTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATK 437
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 560 PKEPEPTTLKEPEPtTPKEPEPTTLKEPEPTTPkEPEPtttKEPESTTRKEPEPTTPKEPEPTTPKEPEP--TTPKEPEP 637
Cdd:PRK07994 438 AKKSEPAAASRARP-VNSALERLASVRPAPSAL-EKAP---AKKEAYRWKATNPVEVKKEPVATPKALKKalEHEKTPEL 512
|
170
....*....|...
gi 1907070833 638 TTPKEPEPTTPKE 650
Cdd:PRK07994 513 AAKLAAEAIERDP 525
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
408-583 |
1.10e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 56.04 E-value: 1.10e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 408 RKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP---KEPE 484
Cdd:PRK12323 391 APAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAAAPAAAARpaaAGPR 470
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 485 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP--TTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKE 562
Cdd:PRK12323 471 PVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPaqPDAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPA 550
|
170 180
....*....|....*....|...
gi 1907070833 563 PEPTTLKEPE--PTTPKEPEPTT 583
Cdd:PRK12323 551 PRAAAATEPVvaPRPPRASASGL 573
|
|
| PRK08691 |
PRK08691 |
DNA polymerase III subunits gamma and tau; Validated |
508-725 |
1.13e-07 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 56.26 E-value: 1.13e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 508 EPTTPKEPEPTTPKEPepTTPKEPEPTtpkePEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEP 587
Cdd:PRK08691 373 ENTELQSPSAQTAEKE--TAAKKPQPR----PEAETAQTPVQTASAAAMPSEGKTAGPVSNQENNDVPPWEDAPDEAQTA 446
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 588 EPTTPKepeptttkePESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKE 666
Cdd:PRK08691 447 AGTAQT---------SAKSIQTASEAETPPENQVSKNKAADNETDAPLSEVPSENPIQATPnDEAVETETFAHEAPAEPF 517
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 667 PEPTTPKKPEPttPKEPEPTTPKEPEPTTPKEP-EPTTPKEPEPTTRKEPEptTPKEPEP 725
Cdd:PRK08691 518 YGYGFPDNDCP--PEDGAEIPPPDWEHAAPADTaGGGADEEAEAGGIGGNN--TPSAPPP 573
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
412-493 |
1.20e-07 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 56.35 E-value: 1.20e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 412 EPTTPKEPEPTTPKEPEPTTPK--EPEPTTPKEPEPtTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkepePTTPK 489
Cdd:PRK15313 559 EPDEPIIPDPVDPVIPDPVIPDpvDPDPVDPVIPDP-VIPDPVDPDPVDPEPVDPVIPDPTIPDIGQSDTP----PITEH 633
|
....
gi 1907070833 490 EPEP 493
Cdd:PRK15313 634 QFRP 637
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
469-643 |
1.22e-07 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 56.20 E-value: 1.22e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 469 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpkEPEPTTPKEPEPTTPKEPEPTTPKE-PEPTTLKEP 547
Cdd:PRK10811 846 PVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVV--EAVAEVVEEPVVVAEPQPEEVVVVEtTHPEVIAAP 923
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 548 EPTTPKEPEPTTPKEPEPTTlKEPEPTTPKEPEPTTLKEPEPTtpkepEPTTTKEPESTTrkepEPTTPKEPEPTTPKEP 627
Cdd:PRK10811 924 VTEQPQVITESDVAVAQEVA-EHAEPVVEPQDETADIEEAAET-----AEVVVAEPEVVA----QPAAPVVAEVAAEVET 993
|
170
....*....|....*.
gi 1907070833 628 EPTTPKEPEPTTPKEP 643
Cdd:PRK10811 994 VTAVEPEVAPAQVPEA 1009
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
611-690 |
1.23e-07 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 56.44 E-value: 1.23e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 611 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKE 690
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
560-736 |
1.30e-07 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 56.03 E-value: 1.30e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 560 PKEPEPTTLKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 639
Cdd:PRK07994 361 PAAPLPEPEVPPQSAAPAASAQAT---AAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATK 437
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 640 PKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKKPepttPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEpeptt 719
Cdd:PRK07994 438 AKKSEPAAASRARPV-NSALERLASVRPAPSALEKA----PAKKEAYRWKATNPVEVKKEPVATPKALKKALEHE----- 507
|
170
....*....|....*..
gi 1907070833 720 pKEPEPTTPKEPEPTTP 736
Cdd:PRK07994 508 -KTPELAAKLAAEAIER 523
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
635-710 |
1.48e-07 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 56.05 E-value: 1.48e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070833 635 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPT 710
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAV 113
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
501-691 |
1.52e-07 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 55.82 E-value: 1.52e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 501 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTlkEPEPTTPKEPEPTTPKEPepttlkePEPTTPKEPE 580
Cdd:PRK10811 846 PVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVV--EAVAEVVEEPVVVAEPQP-------EEVVVVETTH 916
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 581 PTTLKEPEPTTPKEPEPTTTKEPESTTRkEPEPTTPKEPEPTTPKEPEPTT---PKEPEP-TTPKEPEPTTPKEPEPTTP 656
Cdd:PRK10811 917 PEVIAAPVTEQPQVITESDVAVAQEVAE-HAEPVVEPQDETADIEEAAETAevvVAEPEVvAQPAAPVVAEVAAEVETVT 995
|
170 180 190
....*....|....*....|....*....|....*..
gi 1907070833 657 KEPEPTTPKEPEPTTPKKPEPTTP--KEPEPTTPKEP 691
Cdd:PRK10811 996 AVEPEVAPAQVPEATVEHNHATAPmtRAPAPEYVPEA 1032
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
451-530 |
1.67e-07 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 56.05 E-value: 1.67e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 451 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 530
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
432-605 |
1.73e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 55.35 E-value: 1.73e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 432 PKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 511
Cdd:PRK14948 363 AFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATT--PSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLN 440
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 512 PKE---------PEPTT------------------------------------------------------PKEPEPTTP 528
Cdd:PRK14948 441 LEElwqqilaklELPSTrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnleSQSGSASNT 520
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070833 529 KEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTlKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPES 605
Cdd:PRK14948 521 AKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTA-TQASSNAPAQIPADSSPPPPIPEEPTPSPTKDSSPEE 596
|
|
| Aim21 |
pfam11489 |
Altered inheritance of mitochondria protein 21; This is a family of proteins conserved in ... |
410-705 |
1.83e-07 |
|
Altered inheritance of mitochondria protein 21; This is a family of proteins conserved in yeasts. Saccharomyces cerevisiae Aim21 may be involved in mitochondrial migration along actin filament. It may also interact with ribosomes.
Pssm-ID: 371558 [Multi-domain] Cd Length: 677 Bit Score: 55.36 E-value: 1.83e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 410 EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpKEPEPTTLKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPTTP 488
Cdd:pfam11489 290 SPAPQSSSASPSGESGEEERDWYEEPILAS-DEVAKEPAGEEPAVSPSFEREEIVKyEVKSRTESVPESREESKIASIHG 368
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 489 KEPEPTTPKEPEPTtpKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPK-EPEPTTPKEPEPTT 567
Cdd:pfam11489 369 SVPSLARHTPLEDV--EEYEPLFPEDDSEGAVKKPTEESSRFKRPELNHRFPSEDVWEDSPSSLQlTATVSTPSNPPPRA 446
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 568 LKEPEPTTPKEPEPTTLKEPEPTTPKEPEpttTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 647
Cdd:pfam11489 447 FETPEQETSSSSSEPSLDDQSELKSEDVK---ERPEVKAQRFPSRDVWEDAPESQELVTTVETPDEVKSTSPGVPTKPAI 523
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070833 648 PKEPEptTPKEPEPTTPKEPePTTPKKPEPTTPKEPE-PTTPKEPEPTTPKEPEPTTPK 705
Cdd:pfam11489 524 PARPK--SGKPTSPTEKRKP-PPVPKKPKPQIPARPAkAQPQQAGEEFKPKPRVPARPG 579
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
436-525 |
2.10e-07 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 55.58 E-value: 2.10e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 436 EPTTPKEPEPTTLKEPEPTTPKepepttPKEPEPTTPKEPEPTTPKEPEPtTPKEPEPTTPKEPEPTTPKEPEPTTPkep 515
Cdd:PRK15313 559 EPDEPIIPDPVDPVIPDPVIPD------PVDPDPVDPVIPDPVIPDPVDP-DPVDPEPVDPVIPDPTIPDIGQSDTP--- 628
|
90
....*....|
gi 1907070833 516 ePTTPKEPEP 525
Cdd:PRK15313 629 -PITEHQFRP 637
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
476-565 |
2.10e-07 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 55.58 E-value: 2.10e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 476 EPTTPKEPEPTTPKEPEPTTPKepepttPKEPEPTTPKEPEPTTPKEPEPtTPKEPEPTTPKEPEPTTLKEPEPTTPkep 555
Cdd:PRK15313 559 EPDEPIIPDPVDPVIPDPVIPD------PVDPDPVDPVIPDPVIPDPVDP-DPVDPEPVDPVIPDPTIPDIGQSDTP--- 628
|
90
....*....|
gi 1907070833 556 ePTTPKEPEP 565
Cdd:PRK15313 629 -PITEHQFRP 637
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
496-666 |
2.10e-07 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 55.26 E-value: 2.10e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 496 PKEPEPTTPKEPEPTTPKEPEPTTPkepEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTT 575
Cdd:PRK07994 361 PAAPLPEPEVPPQSAAPAASAQATA---APTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATK 437
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 576 PKEPEPTTLKEPEPtTPKEPEPTTTKEPESTTRKEPepttPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP--TTPKEPEP 653
Cdd:PRK07994 438 AKKSEPAAASRARP-VNSALERLASVRPAPSALEKA----PAKKEAYRWKATNPVEVKKEPVATPKALKKalEHEKTPEL 512
|
170
....*....|...
gi 1907070833 654 TTPKEPEPTTPKE 666
Cdd:PRK07994 513 AAKLAAEAIERDP 525
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
421-640 |
2.18e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 55.27 E-value: 2.18e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 421 PTTPKEPEPTTPKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 500
Cdd:PRK12323 375 ATAAAAPVAQPAPAAAAPAAAAPAPAA---PPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPA 451
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 501 PTTPKEPEPTTPKEPEPttpkePEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPttlkepEPTTPKEPE 580
Cdd:PRK12323 452 PAPAAAPAAAARPAAAG-----PRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAP------AQPDAAPAG 520
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 581 PTTLKEPEPTTPKEPEPTTTKEPESTTrkEPEPTTPKEPEPTTPkepePTTPKEPEPTTP 640
Cdd:PRK12323 521 WVAESIPDPATADPDDAFETLAPAPAA--APAPRAAAATEPVVA----PRPPRASASGLP 574
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
501-735 |
2.52e-07 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 55.33 E-value: 2.52e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 501 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPkepepttPKEPEPTTLKEPEPTTPKEPE 580
Cdd:PHA03247 255 PAPPPVVGEGADRAPETARGATGPPPPPEAAAPNGAAAPPDGVWGAALAGAP-------LALPAPPDPPPPAPAGDAEEE 327
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 581 PTTLKEPEPTTPKePEPTTTKEPESTTRKEPEPTTPKEPEPTT------PKEPEPTTPKEPEPTTpKEPEPTTPKEPEPT 654
Cdd:PHA03247 328 DDEDGAMEVVSPL-PRPRQHYPLGFPKRRRPTWTPPSSLEDLSagrhhpKRASLPTRKRRSARHA-ATPFARGPGGDDQT 405
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 655 TPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPT-TPKEPE-PTTPKEPEPTTPkePEPTTRKEPEPTTPKEPEP-TTPKEP 731
Cdd:PHA03247 406 RPAAPVPASVPTPAPTPVPASAPPPPATPLPSaEPGSDDgPAPPPERQPPAP--ATEPAPDDPDDATRKALDAlRERRPP 483
|
....
gi 1907070833 732 EPTT 735
Cdd:PHA03247 484 EPPG 487
|
|
| MSCRAMM_ClfB |
NF033845 |
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial ... |
432-705 |
2.53e-07 |
|
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468203 [Multi-domain] Cd Length: 871 Bit Score: 55.34 E-value: 2.53e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 432 PKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPttpkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 511
Cdd:NF033845 543 PKDPTPGPPVDPEPSPEPEPEPTPDPEPSPDPDPEPSP----DPDPDSDSDSDSGSDSDSGSDSDSDSDSDSDSDSDSDS 618
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 512 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTT 591
Cdd:NF033845 619 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 698
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 592 PKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 671
Cdd:NF033845 699 SDSSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 778
|
250 260 270
....*....|....*....|....*....|....*.
gi 1907070833 672 PKKPEPTTPKEPEPTTPKEPEPTTP--KEPEPTTPK 705
Cdd:NF033845 779 DSDSDSDSDSDSDSDSDSDSRVTPPnnEQKAPSNPK 814
|
|
| MSCRAMM_ClfB |
NF033845 |
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial ... |
456-729 |
2.78e-07 |
|
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468203 [Multi-domain] Cd Length: 871 Bit Score: 54.95 E-value: 2.78e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 456 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPttpkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 535
Cdd:NF033845 543 PKDPTPGPPVDPEPSPEPEPEPTPDPEPSPDPDPEPSP----DPDPDSDSDSDSGSDSDSGSDSDSDSDSDSDSDSDSDS 618
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 536 PKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTT 615
Cdd:NF033845 619 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 698
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 616 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTT 695
Cdd:NF033845 699 SDSSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 778
|
250 260 270
....*....|....*....|....*....|....*.
gi 1907070833 696 PKEPEPTTPKEPEPTTRKEPEPTTP--KEPEPTTPK 729
Cdd:NF033845 779 DSDSDSDSDSDSDSDSDSDSRVTPPnnEQKAPSNPK 814
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
414-744 |
2.87e-07 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 55.16 E-value: 2.87e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 414 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKE-PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPT--TPKE 490
Cdd:pfam03154 197 AGPTPSAPSVPPQGSPATSQPPNQTQSTAAPHTLIQQtPTLHPQRLPSPHPPLQPMTQPPPPSQVSPQPLPQPSlhGQMP 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 491 PEP----TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTT----PKEPEPTTPKE 562
Cdd:pfam03154 277 PMPhslqTGPSHMQHPVPPQPFPLTPQSSQSQVPPGPSPAAPGQSQQRIHTPPSQSQLQSQQPPReqplPPAPLSMPHIK 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 563 PEPTTLKEPEPTTPKEPEPTTLKEPEP--TTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 640
Cdd:pfam03154 357 PPPTTPIPQLPNPQSHKHPPHLSGPSPfqMNSNLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQQLPPPPAQPPVLTQ 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 641 KEPEPTTPKEPEPTTPKEPEPTTPKEPE-PTTPKKPEPTTPKE-PEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPT 718
Cdd:pfam03154 437 SQSLPPPAASHPPTSGLHQVPSQSPFPQhPFVPGGPPPITPPSgPPTSTSSAMPGIQPPSSASVSSSGPVPAAVSCPLPP 516
|
330 340
....*....|....*....|....*..
gi 1907070833 719 TP-KEPEPTTPKEPEPTTPkkpEPTTT 744
Cdd:pfam03154 517 VQiKEEALDEAEEPESPPP---PPRSP 540
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
535-688 |
3.03e-07 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 54.00 E-value: 3.03e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 535 TPKEPEPTTLKEPEPTTPKEPEPTTPKEPepttlKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPT 614
Cdd:NF040712 178 TALDDEARWLIDPDFGRPLRPLATVPRLA-----REPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGV 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 615 TPKEPEPTTP-----KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTP---KEPEPT 686
Cdd:NF040712 253 EQPEDEPVGPgaapaAEPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKpkrRRRRAS 332
|
..
gi 1907070833 687 TP 688
Cdd:NF040712 333 VP 334
|
|
| NESP55 |
pfam06390 |
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian ... |
491-661 |
3.15e-07 |
|
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian neuroendocrine-specific golgi protein P55 (NESP55) sequences. NESP55 is a novel member of the chromogranin family and is a soluble, acidic, heat-stable secretory protein that is expressed exclusively in endocrine and nervous tissues, although less widely than chromogranins.
Pssm-ID: 115071 [Multi-domain] Cd Length: 261 Bit Score: 53.33 E-value: 3.15e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 491 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLK 569
Cdd:pfam06390 81 PEPSEPESDHEDEDFEPELARPECLEYDEDDfDTETDSETEPESDIESETEFETEPETEPDTAPTTEPETEPEDEPGPVV 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 570 EPEPTTPKE--PEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKEPEPT 646
Cdd:pfam06390 161 PKGATFHQSltERLHALKLQSADASPRRAPPSTQEPESAREGEEPERGPLDKDPRDPEEeEEEKEEEKQQPHRCKPKKPA 240
|
170
....*....|....*
gi 1907070833 647 TPKEPEPTTPKEPEP 661
Cdd:pfam06390 241 RRRDPSPESPPKKGA 255
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
439-592 |
3.22e-07 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 54.00 E-value: 3.22e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 439 TPKEPEPTTLKEPEPTTPKEPEPTTPKE---PEPTTPKEPEPTTPKEPEPTTPKEPEPT-TPKEPEPTTPKEPEPTTPKE 514
Cdd:NF040712 178 TALDDEARWLIDPDFGRPLRPLATVPRLarePADARPEEVEPAPAAEGAPATDSDPAEAgTPDDLASARRRRAGVEQPED 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 515 PEPTTPKEPEPttpkEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTL---KEPEPTT 591
Cdd:NF040712 258 EPVGPGAAPAA----EPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKpkrRRRRASV 333
|
.
gi 1907070833 592 P 592
Cdd:NF040712 334 P 334
|
|
| PRK08691 |
PRK08691 |
DNA polymerase III subunits gamma and tau; Validated |
452-661 |
3.28e-07 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 54.71 E-value: 3.28e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 452 EPTTPKEPEPTTPKEPepTTPKEPEPTtpkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 531
Cdd:PRK08691 373 ENTELQSPSAQTAEKE--TAAKKPQPR----PEAETAQTPVQTASAAAMPSEGKTAGPVSNQENNDVPPWEDAPDEAQTA 446
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 532 EPTTPKePEPTTLKEPEPTTPKEPEPTTPKEPEpttlKEPEPTTPKEPEPTtlkePEPTTP-KEPEPTTTKEPESTTRKE 610
Cdd:PRK08691 447 AGTAQT-SAKSIQTASEAETPPENQVSKNKAAD----NETDAPLSEVPSEN----PIQATPnDEAVETETFAHEAPAEPF 517
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070833 611 PEPTTPKEPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKEP----EPTTPKEPEP 661
Cdd:PRK08691 518 YGYGFPDNDCPPEDGAEIPPPDWEhAAPADTAGGGADEEAEAggigGNNTPSAPPP 573
|
|
| MSCRAMM_ClfB |
NF033845 |
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial ... |
424-697 |
3.33e-07 |
|
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468203 [Multi-domain] Cd Length: 871 Bit Score: 54.95 E-value: 3.33e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 424 PKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPttpkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 503
Cdd:NF033845 543 PKDPTPGPPVDPEPSPEPEPEPTPDPEPSPDPDPEPSP----DPDPDSDSDSDSGSDSDSGSDSDSDSDSDSDSDSDSDS 618
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 504 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTT 583
Cdd:NF033845 619 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 698
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 584 LKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 663
Cdd:NF033845 699 SDSSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 778
|
250 260 270
....*....|....*....|....*....|....*.
gi 1907070833 664 PKEPEPTTPKKPEPTTPKEPEPTTP--KEPEPTTPK 697
Cdd:NF033845 779 DSDSDSDSDSDSDSDSDSDSRVTPPnnEQKAPSNPK 814
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
413-779 |
3.51e-07 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 54.77 E-value: 3.51e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 413 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPttlkepePTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 492
Cdd:pfam03154 180 AASPPSPPPPGTTQAATAGPTPSAPSVPPQGSP-------ATSQPPNQTQSTAAPHTLIQQTPTLHPQRLPSPHPPLQPM 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 493 PTtPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPE 572
Cdd:pfam03154 253 TQ-PPPPSQVSPQPLPQPSLHGQMPPMPHSLQTGPSHMQHPVPP-QPFPLTPQSSQSQVPPGPSPAAPGQSQQRIHTPPS 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 573 PTTPKEPEPTTlKEPEPTTPKePEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 652
Cdd:pfam03154 331 QSQLQSQQPPR-EQPLPPAPL-SMPHIKPPPTTPIPQLPNPQSHKHPPHLSGPSPFQMNSNLPPPPALKPLSSLSTHHPP 408
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 653 PTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPepttrkePEPTTPKEPEPTTPKE-P 731
Cdd:pfam03154 409 SAHPPPLQLMPQSQQLPPPPAQPPVLTQSQSLPPPAASHPPTSGLHQVPSQSPFP-------QHPFVPGGPPPITPPSgP 481
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 1907070833 732 EPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTPASE 779
Cdd:pfam03154 482 PTSTSSAMPGIQPPSSASVSSSGPVPAAVSCPLPPVQIKEEALDEAEE 529
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
549-704 |
3.55e-07 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 54.66 E-value: 3.55e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 549 PTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEP----EPTTTKEPESTTRKEPEPTTPKEPEPTTP 624
Cdd:PRK10811 846 PVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAevveEPVVVAEPQPEEVVVVETTHPEVIAAPVT 925
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 625 KEPEPTTPKEP--EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP-EPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEP 701
Cdd:PRK10811 926 EQPQVITESDVavAQEVAEHAEPVVEPQDETADIEEAAETAEVVVaEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQ 1005
|
...
gi 1907070833 702 TTP 704
Cdd:PRK10811 1006 VPE 1008
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
637-732 |
3.56e-07 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 54.43 E-value: 3.56e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 637 PTTPKEPEPTTPKEPEPTTPKepepTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKE-P 715
Cdd:PRK14950 362 PVPAPQPAKPTAAAPSPVRPT----PAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAPKLTRAAiP 437
|
90
....*....|....*..
gi 1907070833 716 EPTTPKEPEPTTPKEPE 732
Cdd:PRK14950 438 VDEKPKYTPPAPPKEEE 454
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
595-673 |
4.06e-07 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 54.51 E-value: 4.06e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070833 595 PEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 673
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDE 116
|
|
| MSCRAMM_ClfB |
NF033845 |
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial ... |
464-737 |
4.08e-07 |
|
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468203 [Multi-domain] Cd Length: 871 Bit Score: 54.57 E-value: 4.08e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 464 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTtpKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 543
Cdd:NF033845 543 PKDPTPGPPVDPEPSPEPEPEPTPDPEPSPD--PDPEPSPDPDPDSDSDSDSGSDSDSGSDSDSDSDSDSDSDSDSDSDS 620
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 544 LKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTT 623
Cdd:NF033845 621 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 700
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 624 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 703
Cdd:NF033845 701 SSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 780
|
250 260 270
....*....|....*....|....*....|....
gi 1907070833 704 PKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPK 737
Cdd:NF033845 781 DSDSDSDSDSDSDSDSDSRVTPPNNEQKAPSNPK 814
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
416-589 |
4.17e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 54.20 E-value: 4.17e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 416 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 495
Cdd:PRK14948 363 AFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATT--PSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLN 440
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 496 PKE---------PEPTT------------------------------------------------------PKEPEPTTP 512
Cdd:PRK14948 441 LEElwqqilaklELPSTrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnleSQSGSASNT 520
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070833 513 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEP 589
Cdd:PRK14948 521 AKTPPPPQKSPPPPAPTPPLPQPTATAPPPT---PPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTKDSSP 594
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
611-685 |
4.90e-07 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 54.42 E-value: 4.90e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070833 611 PEPTTPKEPEPTTPK--EPEPTTPKEPEPTTPKEPEPtTPKEPEPTTPKEPEPTTPKEPEPTTPkkpePTTPKEPEP 685
Cdd:PRK15313 566 PDPVDPVIPDPVIPDpvDPDPVDPVIPDPVIPDPVDP-DPVDPEPVDPVIPDPTIPDIGQSDTP----PITEHQFRP 637
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
443-522 |
4.98e-07 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 54.13 E-value: 4.98e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 443 PEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 522
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
559-720 |
5.18e-07 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 53.23 E-value: 5.18e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 559 TPKEPEPTTLKEPEPTTPKEPEPTTLKE---PEPTTPKEPEPTTTKEPESTTRKEPEPT-TPKEPEPTTPKEPEPTTPKE 634
Cdd:NF040712 178 TALDDEARWLIDPDFGRPLRPLATVPRLarePADARPEEVEPAPAAEGAPATDSDPAEAgTPDDLASARRRRAGVEQPED 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 635 PEPTTPKEPEPttpkEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKepeptTRKE 714
Cdd:NF040712 258 EPVGPGAAPAA----EPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKP-----KRRR 328
|
....*.
gi 1907070833 715 PEPTTP 720
Cdd:NF040712 329 RRASVP 334
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
613-708 |
6.26e-07 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 53.66 E-value: 6.26e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 613 PTTPKEPEPTTPKEPEPTTPKepepTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKE-P 691
Cdd:PRK14950 362 PVPAPQPAKPTAAAPSPVRPT----PAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAPKLTRAAiP 437
|
90
....*....|....*..
gi 1907070833 692 EPTTPKEPEPTTPKEPE 708
Cdd:PRK14950 438 VDEKPKYTPPAPPKEEE 454
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
453-618 |
6.58e-07 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 53.89 E-value: 6.58e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 453 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpkEPEPTTPKEPEPTTPKEPEPTTPKE-PEPTTPKEP 531
Cdd:PRK10811 846 PVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVV--EAVAEVVEEPVVVAEPQPEEVVVVEtTHPEVIAAP 923
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 532 EPTTPKEPEPTTLKEPEPTTPkEPEPTTPKEPEPTTLKEPEPTT---PKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTR 608
Cdd:PRK10811 924 VTEQPQVITESDVAVAQEVAE-HAEPVVEPQDETADIEEAAETAevvVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVA 1002
|
170
....*....|
gi 1907070833 609 KEPEPTTPKE 618
Cdd:PRK10811 1003 PAQVPEATVE 1012
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
525-715 |
6.69e-07 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 53.89 E-value: 6.69e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 525 PTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTlkEPEPTTPKEPEPTTLKEPEPTTPKEpepTTTKEPE 604
Cdd:PRK10811 846 PVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVV--EAVAEVVEEPVVVAEPQPEEVVVVE---TTHPEVI 920
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 605 STTRKEPEPTTPKEPEPT---TPKEPEPTTPKEPEPTTPKEPEPTtpkepEPTTPKEPEP-TTPKEPEPTTPKKPEPTTP 680
Cdd:PRK10811 921 AAPVTEQPQVITESDVAVaqeVAEHAEPVVEPQDETADIEEAAET-----AEVVVAEPEVvAQPAAPVVAEVAAEVETVT 995
|
170 180 190
....*....|....*....|....*....|....*..
gi 1907070833 681 KEPEPTTPKEPEPTTPKEPEPTTP--KEPEPTTRKEP 715
Cdd:PRK10811 996 AVEPEVAPAQVPEATVEHNHATAPmtRAPAPEYVPEA 1032
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
651-730 |
6.70e-07 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 53.74 E-value: 6.70e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 651 PEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKE 730
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
427-506 |
6.81e-07 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 53.74 E-value: 6.81e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 427 PEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 506
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
659-737 |
6.87e-07 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 53.74 E-value: 6.87e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070833 659 PEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPK 737
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDE 116
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
440-613 |
7.09e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 53.43 E-value: 7.09e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 440 PKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 519
Cdd:PRK14948 363 AFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATT--PSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLN 440
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 520 PKE---------PEPTT------------------------------------------------------PKEPEPTTP 536
Cdd:PRK14948 441 LEElwqqilaklELPSTrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnleSQSGSASNT 520
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070833 537 KEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEP 613
Cdd:PRK14948 521 AKTPPPPQKSPPPPAPTPPLPQPTATAPPPT---PPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTKDSSP 594
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
410-552 |
7.18e-07 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 52.85 E-value: 7.18e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 410 EPEPTTPKEPEPTTPKE---PEPTTPKEPEPTTPKEPEPTTLKEPEPT-TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 485
Cdd:NF040712 189 DPDFGRPLRPLATVPRLarePADARPEEVEPAPAAEGAPATDSDPAEAgTPDDLASARRRRAGVEQPEDEPVGPGAAPAA 268
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 486 ttpkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTL---KEPEPTTP 552
Cdd:NF040712 269 ----EPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKpkrRRRRASVP 334
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
427-516 |
7.43e-07 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 53.27 E-value: 7.43e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 427 PEPTTPKEPEPTtPKEPEPTTLKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKE-PEPTTP 504
Cdd:PRK14950 366 PQPAKPTAAAPS-PVRPTPAPSTRPKAAAAANIPPKEPVrETATPPPVPPRPVAP--PVPHTPESAPKLTRAAiPVDEKP 442
|
90
....*....|..
gi 1907070833 505 KEPEPTTPKEPE 516
Cdd:PRK14950 443 KYTPPAPPKEEE 454
|
|
| MSCRAMM_ClfB |
NF033845 |
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial ... |
409-681 |
7.58e-07 |
|
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468203 [Multi-domain] Cd Length: 871 Bit Score: 53.41 E-value: 7.58e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 409 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPttlkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 488
Cdd:NF033845 544 KDPTPGPPVDPEPSPEPEPEPTPDPEPSPDPDPEPSP----DPDPDSDSDSDSGSDSDSGSDSDSDSDSDSDSDSDSDSD 619
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 489 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTL 568
Cdd:NF033845 620 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 699
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 569 KEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 648
Cdd:NF033845 700 DSSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 779
|
250 260 270
....*....|....*....|....*....|....*
gi 1907070833 649 KEPEPTTPKEPEPTTPKEPEPTTPKKPE--PTTPK 681
Cdd:NF033845 780 SDSDSDSDSDSDSDSDSDSRVTPPNNEQkaPSNPK 814
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
587-666 |
7.67e-07 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 53.74 E-value: 7.67e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 587 PEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 666
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
450-701 |
8.37e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 53.31 E-value: 8.37e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 450 EPEPT----TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 525
Cdd:PRK07003 359 EPAVTgggaPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADR 438
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 526 TTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPtttkEPES 605
Cdd:PRK07003 439 GDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDA----RAPA 514
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 606 TTRKEPEPTTPKEPEPTTPkEPEPTTPKEP------------------EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 667
Cdd:PRK07003 515 AASREDAPAAAAPPAPEAR-PPTPAAAAPAaraggaaaaldvlrnagmRVSSDRGARAAAAAKPAAAPAAAPKPAAPRVA 593
|
250 260 270
....*....|....*....|....*....|....*
gi 1907070833 668 EPT-TPKKPEPTTPKEPEPTTPKEPEPTTPKEPEP 701
Cdd:PRK07003 594 VQVpTPRARAATGDAPPNGAARAEQAAESRGAPPP 628
|
|
| PRK13108 |
PRK13108 |
prolipoprotein diacylglyceryl transferase; Reviewed |
552-714 |
8.38e-07 |
|
prolipoprotein diacylglyceryl transferase; Reviewed
Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 53.06 E-value: 8.38e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 552 PKEPEPTT-PKEPEPTTLKEPEPTTPKEP-EPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTP----K 625
Cdd:PRK13108 295 ALEREPAElAAAAVASAASAVGPVGPGEPnQPDDVAEAVKAEVAEVTDEVAAESVVQVADRDGESTPAVEETSEAdierE 374
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 626 EPEPTTPKEPE-PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKkpepTTPKEPEPTTPKEPEPtTPKEPEPTTP 704
Cdd:PRK13108 375 QPGDLAGQAPAaHQVDAEAASAAPEEPAALASEAHDETEPEVPEKAAPI----PDPAKPDELAVAGPGD-DPAEPDGIRR 449
|
170
....*....|
gi 1907070833 705 KEPEPTTRKE 714
Cdd:PRK13108 450 QDDFSSRRRR 459
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
571-733 |
9.81e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 53.04 E-value: 9.81e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 571 PEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTrkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE------ 644
Cdd:PRK14948 366 SEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAAT--TPSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPslnlee 443
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 645 -----------PTT------------------------------------------------------PKEPEPTTPKEP 659
Cdd:PRK14948 444 lwqqilaklelPSTrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnleSQSGSASNTAKT 523
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907070833 660 EPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKePEPTTPKEPEP 733
Cdd:PRK14948 524 PPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPT-PSPTKDSSPEE 596
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
435-514 |
9.97e-07 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 53.36 E-value: 9.97e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 435 PEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 514
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
475-571 |
1.02e-06 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 53.36 E-value: 1.02e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 475 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTlkepepttpke 554
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAA----------- 106
|
90
....*....|....*..
gi 1907070833 555 PEPTTPKEPEPTTLKEP 571
Cdd:PRK12270 107 APAAAAVEDEVTPLRGA 123
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
499-600 |
1.12e-06 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 52.97 E-value: 1.12e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 499 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTlkePEPTTPKE 578
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAA---APAAAAVE 114
|
90 100
....*....|....*....|....*..
gi 1907070833 579 PEPTTLKEPEPTTPKEPE-----PTTT 600
Cdd:PRK12270 115 DEVTPLRGAAAAVAKNMDaslevPTAT 141
|
|
| PRK08691 |
PRK08691 |
DNA polymerase III subunits gamma and tau; Validated |
444-653 |
1.21e-06 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 52.79 E-value: 1.21e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 444 EPTTLKEPEPTTPKEPepTTPKEPEPTTPKEPEPTTPKEPE----PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 519
Cdd:PRK08691 373 ENTELQSPSAQTAEKE--TAAKKPQPRPEAETAQTPVQTASaaamPSEGKTAGPVSNQENNDVPPWEDAPDEAQTAAGTA 450
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 520 PKePEPTTPKEPEPTTPKEPEPTTLKEPEpttpKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTT 599
Cdd:PRK08691 451 QT-SAKSIQTASEAETPPENQVSKNKAAD----NETDAPLSEVPSENPIQATPNDEAVETETFAHEAPAEPFYGYGFPDN 525
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 1907070833 600 TKEPESTTRKEPEPTTPKEPEPTTPKEPEpttpKEPEPTTPKEPEptTPKEPEP 653
Cdd:PRK08691 526 DCPPEDGAEIPPPDWEHAAPADTAGGGAD----EEAEAGGIGGNN--TPSAPPP 573
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
599-682 |
1.21e-06 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 52.97 E-value: 1.21e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 599 TTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPT 678
Cdd:PRK12270 34 ADYGPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAV 113
|
....
gi 1907070833 679 TPKE 682
Cdd:PRK12270 114 EDEV 117
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
573-736 |
1.29e-06 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 52.73 E-value: 1.29e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 573 PTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTpkEPEPTTPKEPEPTTpkEPEPTTPKEPEPTTPKEPE 652
Cdd:PRK10811 846 PVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVV--EAVAEVVEEPVVVA--EPQPEEVVVVETTHPEVIA 921
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 653 PTTPKEPEPTTPKEP--EPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEP-EPTTPKEPEPTTRKEPEPTTPKEPEPTTPK 729
Cdd:PRK10811 922 APVTEQPQVITESDVavAQEVAEHAEPVVEPQDETADIEEAAETAEVVVaEPEVVAQPAAPVVAEVAAEVETVTAVEPEV 1001
|
....*..
gi 1907070833 730 EPEPTTP 736
Cdd:PRK10811 1002 APAQVPE 1008
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
419-498 |
1.40e-06 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 52.97 E-value: 1.40e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 419 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 498
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
643-722 |
1.41e-06 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 52.97 E-value: 1.41e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 643 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKE 722
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
522-715 |
1.47e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 52.54 E-value: 1.47e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 522 EPEPTTPKEPEPTTPKEPePTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTtPKEPEPTTTK 601
Cdd:PRK07003 359 EPAVTGGGAPGGGVPARV-AGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAP-PAAPAPPATA 436
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 602 EPESTTRKEPEPTTPKEPEPTTPKEPEPttPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPK 681
Cdd:PRK07003 437 DRGDDAADGDAPVPAKANARASADSRCD--ERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPA 514
|
170 180 190
....*....|....*....|....*....|....
gi 1907070833 682 EPepttPKEPEPTTPKEPEPTTPkEPEPTTRKEP 715
Cdd:PRK07003 515 AA----SREDAPAAAAPPAPEAR-PPTPAAAAPA 543
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
451-540 |
1.50e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 52.50 E-value: 1.50e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 451 PEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKE-PEPTTP 528
Cdd:PRK14950 366 PQPAKPTAAAPS-PVRPTPAPSTRPKAAAAANIPPKEPVrETATPPPVPPRPVAP--PVPHTPESAPKLTRAAiPVDEKP 442
|
90
....*....|..
gi 1907070833 529 KEPEPTTPKEPE 540
Cdd:PRK14950 443 KYTPPAPPKEEE 454
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
405-570 |
1.53e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 52.27 E-value: 1.53e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 405 STTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKE---------P 475
Cdd:PRK14948 374 PANPTPAPNPSPPPAPIQPSAPKTKQAATTPSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLNLEElwqqilaklE 453
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 476 EPTT------------------------------------------------------PKEPEPTTPKEPEPTTPKEPEP 501
Cdd:PRK14948 454 LPSTrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnleSQSGSASNTAKTPPPPQKSPPP 533
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070833 502 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTPKEPEPTTLKE 570
Cdd:PRK14948 534 PAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSS---PPPPIPEEPTPSPTKDSSPEEIDK 599
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
413-508 |
1.54e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 52.50 E-value: 1.54e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 413 PTTPKEPEPTTPKEPEPTTPKepepTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE-P 491
Cdd:PRK14950 362 PVPAPQPAKPTAAAPSPVRPT----PAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAPKLTRAAiP 437
|
90
....*....|....*..
gi 1907070833 492 EPTTPKEPEPTTPKEPE 508
Cdd:PRK14950 438 VDEKPKYTPPAPPKEEE 454
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
611-700 |
1.55e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 52.50 E-value: 1.55e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 611 PEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPkePEPTTPKKPEPTTPKE-PEPTTP 688
Cdd:PRK14950 366 PQPAKPTAAAPS-PVRPTPAPSTRPKAAAAANIPPKEPVrETATPPPVPPRPVAP--PVPHTPESAPKLTRAAiPVDEKP 442
|
90
....*....|..
gi 1907070833 689 KEPEPTTPKEPE 700
Cdd:PRK14950 443 KYTPPAPPKEEE 454
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
411-490 |
1.59e-06 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 52.59 E-value: 1.59e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 411 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 490
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
|
| DUF4045 |
pfam13254 |
Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. ... |
557-725 |
1.67e-06 |
|
Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. This domain family is found in bacteria and eukaryotes, and is typically between 384 and 430 amino acids in length.
Pssm-ID: 433066 [Multi-domain] Cd Length: 415 Bit Score: 51.71 E-value: 1.67e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 557 PTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPEStTRKEPEPTTPKEPEPTTPKEPEPTTPKEPE 636
Cdd:pfam13254 197 PNSFKEVTPVGLMRSPAPGGHSKSPSVSGISADSSPTKEEPSEEADTLS-TDKEQSPAPTSASEPPPKTKELPKDSEEPA 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 637 PTTPKEPEPTTPKEPEptTPKEPEPTTPKEPEPTTPKKPEPTTPKepePTTPKEPEPTTPKEPEPTTPKEPEPTTRK-EP 715
Cdd:pfam13254 276 APSKSAEASTEKKEPD--TESSPETSSEKSAPSLLSPVSKASIDK---PLSSPDRDPLSPKPKPQSPPKDFRANLRSrEV 350
|
170
....*....|
gi 1907070833 716 EPTTPKEPEP 725
Cdd:pfam13254 351 PKDKSKKDEP 360
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
427-735 |
1.70e-06 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 52.46 E-value: 1.70e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 427 PEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP-EPTTPK 505
Cdd:pfam03154 146 PSIPSPQDNESDSDSSAQQQILQTQPPVLQAQSGAASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPnQTQSTA 225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 506 EPEPTTPKEPEPTTPKEPEPTTPKEPEPttpkEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLK 585
Cdd:pfam03154 226 APHTLIQQTPTLHPQRLPSPHPPLQPMT----QPPPPSQVSPQPLPQPSLHGQMPPMPHSLQTGPSHMQHPVPPQPFPLT 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 586 EPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPepttpkepepTTPKEPEPTTPKEPEPTTPKEPEPTTPK 665
Cdd:pfam03154 302 PQSSQSQVPPGPSPAAPGQSQQRIHTPPSQSQLQSQQPPREQ----------PLPPAPLSMPHIKPPPTTPIPQLPNPQS 371
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907070833 666 EPEPTTPKKPEP--TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTT 735
Cdd:pfam03154 372 HKHPPHLSGPSPfqMNSNLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQQLPPPPAQPPVLTQSQSLPPP 443
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
627-734 |
1.81e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 52.02 E-value: 1.81e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 627 PEPTTPKEPEPTTP---KEPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPT 702
Cdd:PRK14951 376 AEKKTPARPEAAAPaaaPVAQAAAAPAPAAAPAAAaSAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQA 455
|
90 100 110
....*....|....*....|....*....|..
gi 1907070833 703 TPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPT 734
Cdd:PRK14951 456 APETVAIPVRVAPEPAVASAAPAPAAAPAAAR 487
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
522-664 |
1.86e-06 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 51.31 E-value: 1.86e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 522 EPEPTTPKEPEPTTPKE---PEPTTLKEPEPTTPKEPEPTTPKEPEPTTlkEPEPTTPKEPEPTTLKEPEPTTPkEPEPT 598
Cdd:NF040712 189 DPDFGRPLRPLATVPRLarePADARPEEVEPAPAAEGAPATDSDPAEAG--TPDDLASARRRRAGVEQPEDEPV-GPGAA 265
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070833 599 TTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP---KEPEPTTP 664
Cdd:NF040712 266 PAAEPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKpkrRRRRASVP 334
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
500-576 |
1.90e-06 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 52.49 E-value: 1.90e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070833 500 EPTTPKEPEPTTPKEPEPTTPKepepttPKEPEPTTPKEPEPtTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTP 576
Cdd:PRK15313 559 EPDEPIIPDPVDPVIPDPVIPD------PVDPDPVDPVIPDP-VIPDPVDPDPVDPEPVDPVIPDPTIPDIGQSDTP 628
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
621-724 |
1.95e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 52.12 E-value: 1.95e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 621 PTTPKEPEPTTPKEPEPTTPKePEPTTpkepePTTPKEPEPTTPKEPEPTTPKKPEPTtpkePEPTTPkePEPTTPKEPE 700
Cdd:PRK14950 362 PVPAPQPAKPTAAAPSPVRPT-PAPST-----RPKAAAAANIPPKEPVRETATPPPVP----PRPVAP--PVPHTPESAP 429
|
90 100
....*....|....*....|....*
gi 1907070833 701 PTTPKE-PEPTTRKEPEPTTPKEPE 724
Cdd:PRK14950 430 KLTRAAiPVDEKPKYTPPAPPKEEE 454
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
469-564 |
2.07e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 52.12 E-value: 2.07e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 469 PTTPKEPEPTTPKEPEPTTPKepepTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKE-P 547
Cdd:PRK14950 362 PVPAPQPAKPTAAAPSPVRPT----PAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAPKLTRAAiP 437
|
90
....*....|....*..
gi 1907070833 548 EPTTPKEPEPTTPKEPE 564
Cdd:PRK14950 438 VDEKPKYTPPAPPKEEE 454
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
437-532 |
2.09e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 51.73 E-value: 2.09e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 437 PTTPKEPEPTTLKEPEPTTPKepepTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE-P 515
Cdd:PRK14950 362 PVPAPQPAKPTAAAPSPVRPT----PAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAPKLTRAAiP 437
|
90
....*....|....*..
gi 1907070833 516 EPTTPKEPEPTTPKEPE 532
Cdd:PRK14950 438 VDEKPKYTPPAPPKEEE 454
|
|
| MSCRAMM_ClfB |
NF033845 |
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial ... |
449-721 |
2.29e-06 |
|
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468203 [Multi-domain] Cd Length: 871 Bit Score: 51.87 E-value: 2.29e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 449 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTtpKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 528
Cdd:NF033845 544 KDPTPGPPVDPEPSPEPEPEPTPDPEPSPD--PDPEPSPDPDPDSDSDSDSGSDSDSGSDSDSDSDSDSDSDSDSDSDSD 621
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 529 KEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTR 608
Cdd:NF033845 622 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 701
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 609 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTP 688
Cdd:NF033845 702 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 781
|
250 260 270
....*....|....*....|....*....|...
gi 1907070833 689 KEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPK 721
Cdd:NF033845 782 SDSDSDSDSDSDSDSDSRVTPPNNEQKAPSNPK 814
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
411-485 |
2.31e-06 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 52.11 E-value: 2.31e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070833 411 PEPTTPKEPEPTTPK--EPEPTTPKEPEPTTPKEPEPTTLkEPEPTTPKEPEPTTPKEPEPTTPkepePTTPKEPEP 485
Cdd:PRK15313 566 PDPVDPVIPDPVIPDpvDPDPVDPVIPDPVIPDPVDPDPV-DPEPVDPVIPDPTIPDIGQSDTP----PITEHQFRP 637
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
490-632 |
2.53e-06 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 50.92 E-value: 2.53e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 490 EPEPTTPKEPEPTTPKE---PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkePEPTTLKEPEPTTPKEPEPTTPkEPEPT 566
Cdd:NF040712 189 DPDFGRPLRPLATVPRLarePADARPEEVEPAPAAEGAPATDSDPAEAGT--PDDLASARRRRAGVEQPEDEPV-GPGAA 265
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070833 567 TLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTP---KEPEPTTP 632
Cdd:NF040712 266 PAAEPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKpkrRRRRASVP 334
|
|
| NESP55 |
pfam06390 |
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian ... |
571-738 |
2.71e-06 |
|
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian neuroendocrine-specific golgi protein P55 (NESP55) sequences. NESP55 is a novel member of the chromogranin family and is a soluble, acidic, heat-stable secretory protein that is expressed exclusively in endocrine and nervous tissues, although less widely than chromogranins.
Pssm-ID: 115071 [Multi-domain] Cd Length: 261 Bit Score: 50.25 E-value: 2.71e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 571 PEPTTPKEPEPTTLKEPEPTTPKEPEPTTTK-EPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 649
Cdd:pfam06390 81 PEPSEPESDHEDEDFEPELARPECLEYDEDDfDTETDSETEPESDIESETEFETEPETEPDTAPTTEPETEPEDEPGPVV 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 650 EPEPT---TPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPT 726
Cdd:pfam06390 161 PKGATfhqSLTERLHALKLQSADASPRRAPPSTQEPESAREGEEPERGPLDKDPRDPEEEEEEKEEEKQQPHRCKPKKPA 240
|
170
....*....|..
gi 1907070833 727 TPKEPEPTTPKK 738
Cdd:pfam06390 241 RRRDPSPESPPK 252
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
576-738 |
2.98e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 51.50 E-value: 2.98e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 576 PKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 655
Cdd:PRK14948 361 PSAFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATTPSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLN 440
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 656 PKE---------PEPTT------------------------------------------------------PKEPEPTTP 672
Cdd:PRK14948 441 LEElwqqilaklELPSTrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnleSQSGSASNT 520
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070833 673 KKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKK 738
Cdd:PRK14948 521 AKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTP 586
|
|
| PRK10819 |
PRK10819 |
transport protein TonB; Provisional |
419-548 |
3.13e-06 |
|
transport protein TonB; Provisional
Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 50.07 E-value: 3.13e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 419 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKEPEPTTPKEPEPTtpK 497
Cdd:PRK10819 42 PAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPvVIPKPEPKPKPKPKPKPKPVKKVEEQPK--R 119
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 1907070833 498 EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPEPTTLKEPE 548
Cdd:PRK10819 120 EVKPVEPRPASPFENTAPARPTSSTATAAASK-PVTSVSSGPRALSRNQPQ 169
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
459-579 |
3.24e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 51.25 E-value: 3.24e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 459 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 537
Cdd:PRK14951 376 AEKKTPARPEAAAPaAAPVAQAAAAPAPAAA--PAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPA 453
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 1907070833 538 EPEPTTLKEPEPTTPkEPEPTTPKEPePTTLKEPEPTTPKEP 579
Cdd:PRK14951 454 QAAPETVAIPVRVAP-EPAVASAAPA-PAAAPAAARLTPTEE 493
|
|
| MSCRAMM_ClfB |
NF033845 |
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial ... |
528-790 |
3.41e-06 |
|
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468203 [Multi-domain] Cd Length: 871 Bit Score: 51.49 E-value: 3.41e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 528 PKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPttlkEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTT 607
Cdd:NF033845 543 PKDPTPGPPVDPEPSPEPEPEPTPDPEPSPDPDPEPSP----DPDPDSDSDSDSGSDSDSGSDSDSDSDSDSDSDSDSDS 618
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 608 RKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTT 687
Cdd:NF033845 619 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 698
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 688 PKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEI 767
Cdd:NF033845 699 SDSSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 778
|
250 260
....*....|....*....|....
gi 1907070833 768 QNKPEETTPASEDSD-DSKTTLKP 790
Cdd:NF033845 779 DSDSDSDSDSDSDSDsDSDSRVTP 802
|
|
| NESP55 |
pfam06390 |
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian ... |
451-621 |
3.49e-06 |
|
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian neuroendocrine-specific golgi protein P55 (NESP55) sequences. NESP55 is a novel member of the chromogranin family and is a soluble, acidic, heat-stable secretory protein that is expressed exclusively in endocrine and nervous tissues, although less widely than chromogranins.
Pssm-ID: 115071 [Multi-domain] Cd Length: 261 Bit Score: 49.86 E-value: 3.49e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 451 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP--KEPEPTTPKEPEPTT 527
Cdd:pfam06390 81 PEPSEPESDHEDEDFEPELARPECLEYDEDDfDTETDSETEPESDIESETEFETEPETEPDTAptTEPETEPEDEPGPVV 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 528 PKEPEPTTPKEPEPTTLKEPEP-TTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPEST 606
Cdd:pfam06390 161 PKGATFHQSLTERLHALKLQSAdASPRRAPPSTQEPESAREGEEPERGPLDKDPRDPEEEEEEKEEEKQQPHRCKPKKPA 240
|
170
....*....|....*
gi 1907070833 607 TRKEPEPTTPKEPEP 621
Cdd:pfam06390 241 RRRDPSPESPPKKGA 255
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
411-528 |
3.52e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 51.25 E-value: 3.52e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 411 PEPTTPKEPEPTTP-KEPEPTTPKepePTTPKEPEPTTLKEP-EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 488
Cdd:PRK14951 376 AEKKTPARPEAAAPaAAPVAQAAA---APAPAAAPAAAASAPaAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPP 452
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1907070833 489 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 528
Cdd:PRK14951 453 AQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
427-546 |
3.84e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 51.25 E-value: 3.84e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 427 PEPTTPKEPEPTTP-KEPEPTTlkePEPTTPKEPEPT-TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 504
Cdd:PRK14951 376 AEKKTPARPEAAAPaAAPVAQA---AAAPAPAAAPAAaASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPP 452
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 1907070833 505 KEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTLKE 546
Cdd:PRK14951 453 AQAAPETVAIPVRVAP-EPAVASAAPAPAAAPAAARLTPTEE 493
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
483-602 |
4.15e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 50.87 E-value: 4.15e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 483 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPK 561
Cdd:PRK14951 376 AEKKTPARPEAAAPaAAPVAQAAAAPAPAAA--PAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPA 453
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 1907070833 562 EPEPTTLKEPEPTTPkEPEPTTLKEPEPTTPKEPEPTTTKE 602
Cdd:PRK14951 454 QAAPETVAIPVRVAP-EPAVASAAPAPAAAPAAARLTPTEE 493
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
485-580 |
4.15e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 50.96 E-value: 4.15e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 485 PTTPKEPEPTTPKEPEPTTPKepepTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKE-P 563
Cdd:PRK14950 362 PVPAPQPAKPTAAAPSPVRPT----PAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAPKLTRAAiP 437
|
90
....*....|....*..
gi 1907070833 564 EPTTLKEPEPTTPKEPE 580
Cdd:PRK14950 438 VDEKPKYTPPAPPKEEE 454
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
416-737 |
4.26e-06 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 51.24 E-value: 4.26e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 416 PKEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPE-------PTTPKEPEPTTPKEPEPTTP 488
Cdd:PRK10263 366 PQTGEPVIAPAPEGYPQ-QSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQPAQqpyyapaPEQPAQQPYYAPAPEQPVAG 444
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 489 KE---PEPTTPKEPEPTTPKE---PEPTTPKEPE-PTTPKEPEPTTPKEP--EPTTPKEPEPTTLKEPEPTTPKEPEPTT 559
Cdd:PRK10263 445 NAwqaEEQQSTFAPQSTYQTEqtyQQPAAQEPLYqQPQPVEQQPVVEPEPvvEETKPARPPLYYFEEVEEKRAREREQLA 524
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 560 P-KEPEPTTLKEPEPTTPKEPEPTTLKEP--EPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTT----PKEPEPTTP 632
Cdd:PRK10263 525 AwYQPIPEPVKEPEPIKSSLKAPSVAAVPpvEAAAAVSPLASGVKKATLATGAAATVAAPVFSLANSggprPQVKEGIGP 604
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 633 KEPEPTTPKEP-----------------------------------------------------------------EPTT 647
Cdd:PRK10263 605 QLPRPKRIRVPtrrelasygiklpsqraaeekareaqrnqydsgdqynddeidamqqdelarqfaqtqqqrygeqyQHDV 684
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 648 PKEPEPT-----------------------------------------------TPKEP--EPTTPKEPEPTTPKKPEPT 678
Cdd:PRK10263 685 PVNAEDAdaaaeaelarqfaqtqqqrysgeqpaganpfslddfefspmkallddGPHEPlfTPIVEPVQQPQQPVAPQQQ 764
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907070833 679 TPKEPEPTTP----KEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPK 737
Cdd:PRK10263 765 YQQPQQPVAPqpqyQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQ 827
|
|
| PRK10819 |
PRK10819 |
transport protein TonB; Provisional |
611-727 |
4.27e-06 |
|
transport protein TonB; Provisional
Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 49.30 E-value: 4.27e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 611 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKKPEPTTPKEPEPTTPK 689
Cdd:PRK10819 42 PAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPvVIPKPEPKPKPKPKPKPKPVKKVEEQPKREV 121
|
90 100 110
....*....|....*....|....*....|....*...
gi 1907070833 690 EpepttPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTT 727
Cdd:PRK10819 122 K-----PVEPRPASPFENTAPARPTSSTATAAASKPVT 154
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
579-658 |
4.34e-06 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 51.04 E-value: 4.34e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 579 PEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 658
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
593-897 |
4.35e-06 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 51.23 E-value: 4.35e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 593 KEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKEPE-- 668
Cdd:PTZ00449 493 KKKLAPIEEEDSDKHDEPPEGPEASGLPPKAPGDKEGEEGeHEDSKESDEPKEGGKPGEtKEGEVGKKPGPAKEHKPSki 572
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 669 PTTPKKPEptTPKEPE-PTTPKEP-EPTTPKEPE-PTTPKEPepttrKEPE----PTTPKEPE-PTTPKEPEPTTPKKPE 740
Cdd:PTZ00449 573 PTLSKKPE--FPKDPKhPKDPEEPkKPKRPRSAQrPTRPKSP-----KLPElldiPKSPKRPEsPKSPKRPPPPQRPSSP 645
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 741 PTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTPASEDSDDSKTTLKPQKPTKAPKPTKKPTKAPKKPTSTKKPKTPK 820
Cdd:PTZ00449 646 ERPEGPKIIKSPKPPKSPKPPFDPKFKEKFYDDYLDAAAKSKETKTTVVLDESFESILKETLPETPGTPFTTPRPLPPKL 725
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 821 TRKPKTTPSPLKTTSATP----ELNTTPLEVMLPTTTIPKQTPNPE--TAEVNPDHEDADGGEGEKPLI-PGPPVLFPTA 893
Cdd:PTZ00449 726 PRDEEFPFEPIGDPDAEQpddiEFFTPPEEERTFFHETPADTPLPDilAEEFKEEDIHAETGEPDEAMKrPDSPSEHEDK 805
|
....
gi 1907070833 894 IPGT 897
Cdd:PTZ00449 806 PPGD 809
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
611-728 |
4.67e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 50.87 E-value: 4.67e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 611 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPK 689
Cdd:PRK14951 376 AEKKTPARPEAAAPaAAPVAQAAAAPAPAAA--PAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPA 453
|
90 100 110
....*....|....*....|....*....|....*....
gi 1907070833 690 EPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTP 728
Cdd:PRK14951 454 QAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
451-572 |
5.99e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 50.48 E-value: 5.99e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 451 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 529
Cdd:PRK14951 376 AEKKTPARPEAAAPaAAPVAQAAAAPAPAAA--PAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPA 453
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 1907070833 530 EPEPTTPKEPEPTtlkEPEPTTPKEPEPTTPKEPEPTTLKEPE 572
Cdd:PRK14951 454 QAAPETVAIPVRV---APEPAVASAAPAPAAAPAAARLTPTEE 493
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
563-688 |
6.63e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 50.48 E-value: 6.63e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 563 PEPTTLKEPEPTTP-KEPEPTTlkePEPTTPKEPEPTTTKEPesttrkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 641
Cdd:PRK14951 376 AEKKTPARPEAAAPaAAPVAQA---AAAPAPAAAPAAAASAP-------AAPPAAAPPAPVAAPAAAAPAAAPAAAPAAV 445
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 1907070833 642 EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTP 688
Cdd:PRK14951 446 ALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
516-592 |
6.73e-06 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 50.57 E-value: 6.73e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070833 516 EPTTPKEPEPTTPKEPEPTTPkepEPTtlkEPEPTTPKEPEPTTPKEPEPTTLkEPEPTTPKEPEPTTLKEPEPTTP 592
Cdd:PRK15313 559 EPDEPIIPDPVDPVIPDPVIP---DPV---DPDPVDPVIPDPVIPDPVDPDPV-DPEPVDPVIPDPTIPDIGQSDTP 628
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
419-623 |
6.84e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 50.71 E-value: 6.84e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 419 PEPTTPKEPEPTTPKEPEPTTPKEPEP---------TTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP--------- 480
Cdd:PHA03247 269 PETARGATGPPPPPEAAAPNGAAAPPDgvwgaalagAPLALPAPPDPPPPAPAGDAEEEDDEDGAMEVVSPlprprqhyp 348
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 481 ------KEPEPTTPKEPEPTTPKEPEPttPKEPEPTTPKEpepTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKE 554
Cdd:PHA03247 349 lgfpkrRRPTWTPPSSLEDLSAGRHHP--KRASLPTRKRR---SARHAATPFARGPGGDDQTRPAAPVPASVPTPAPTPV 423
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907070833 555 P--EPTTPKEPEPTtlkePEPTTPKEPEPTtlkePEPTTPKEPEPTTTKEPESTTRKEPEP-TTPKEPEPTT 623
Cdd:PHA03247 424 PasAPPPPATPLPS----AEPGSDDGPAPP----PERQPPAPATEPAPDDPDDATRKALDAlRERRPPEPPG 487
|
|
| PRK08691 |
PRK08691 |
DNA polymerase III subunits gamma and tau; Validated |
476-685 |
6.98e-06 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 50.48 E-value: 6.98e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 476 EPTTPKEPEPTTPKEPepTTPKEPEPTtpkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEP 555
Cdd:PRK08691 373 ENTELQSPSAQTAEKE--TAAKKPQPR----PEAETAQTPVQTASAAAMPSEGKTAGPVSNQENNDVPPWEDAPDEAQTA 446
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 556 EPTTPKePEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEP-ESTTRKEPEPTTPKEPEPTTPKEPEPTTPKE 634
Cdd:PRK08691 447 AGTAQT-SAKSIQTASEAETPPENQVSKNKAADNETDAPLSEVPSENPiQATPNDEAVETETFAHEAPAEPFYGYGFPDN 525
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 1907070833 635 PEPttPKEPEPTTPKEPEPTTPKEPEPTTPKEpEPTTPKKPEPTTPKEPEP 685
Cdd:PRK08691 526 DCP--PEDGAEIPPPDWEHAAPADTAGGGADE-EAEAGGIGGNNTPSAPPP 573
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
453-687 |
7.14e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 50.71 E-value: 7.14e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 453 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP---------TTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 523
Cdd:PHA03247 255 PAPPPVVGEGADRAPETARGATGPPPPPEAAAPNGAAAPPDgvwgaalagAPLALPAPPDPPPPAPAGDAEEEDDEDGAM 334
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 524 EPTTPKePEPTT------PKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTpKEPEPTTLKEPEPTTPKEPEP 597
Cdd:PHA03247 335 EVVSPL-PRPRQhyplgfPKRRRPTWTPPSSLEDLSAGRHHPKRASLPTRKRRSARHA-ATPFARGPGGDDQTRPAAPVP 412
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 598 TTTKEPESTTRKEPEPTTPKEPEPT-TPKEPE-PTTPKEPEPTTPKEPepttPKEPEPTTPKEPEPTTPKEPEPTTPKKP 675
Cdd:PHA03247 413 ASVPTPAPTPVPASAPPPPATPLPSaEPGSDDgPAPPPERQPPAPATE----PAPDDPDDATRKALDALRERRPPEPPGA 488
|
250
....*....|..
gi 1907070833 676 EPTTPKEPEPTT 687
Cdd:PHA03247 489 DLAELLGRHPDT 500
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
588-677 |
7.27e-06 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 50.57 E-value: 7.27e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 588 EPTTPKEPEPTTTKEPEsttrkePEPTTPKEPEPTTPKEPEPTTPKEPEPtTPKEPEPTTPKEPEPTTPKEPEPTTPkep 667
Cdd:PRK15313 559 EPDEPIIPDPVDPVIPD------PVIPDPVDPDPVDPVIPDPVIPDPVDP-DPVDPEPVDPVIPDPTIPDIGQSDTP--- 628
|
90
....*....|
gi 1907070833 668 ePTTPKKPEP 677
Cdd:PRK15313 629 -PITEHQFRP 637
|
|
| NESP55 |
pfam06390 |
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian ... |
515-693 |
7.81e-06 |
|
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian neuroendocrine-specific golgi protein P55 (NESP55) sequences. NESP55 is a novel member of the chromogranin family and is a soluble, acidic, heat-stable secretory protein that is expressed exclusively in endocrine and nervous tissues, although less widely than chromogranins.
Pssm-ID: 115071 [Multi-domain] Cd Length: 261 Bit Score: 48.71 E-value: 7.81e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 515 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTLK-EPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPK 593
Cdd:pfam06390 81 PEPSEPESDHEDEDFEPELARPECLEYDEDDfDTETDSETEPESDIESETEFETEPETEPDTAPTTEPETEPEDEPGPVV 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 594 EPEPT---TTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEpTTPKEPEPTTPKEPEpttpkEPEPTTPKEPEPT 670
Cdd:pfam06390 161 PKGATfhqSLTERLHALKLQSADASPRRAPPSTQEPESAREGEEPE-RGPLDKDPRDPEEEE-----EEKEEEKQQPHRC 234
|
170 180
....*....|....*....|...
gi 1907070833 671 TPKKPEPTTPKEPEPTTPKEPEP 693
Cdd:pfam06390 235 KPKKPARRRDPSPESPPKKGAIP 257
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
419-536 |
8.42e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 50.10 E-value: 8.42e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 419 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTlkePEPT-TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 496
Cdd:PRK14951 376 AEKKTPARPEAAAPaAAPVAQAAAAPAPAA---APAAaASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPP 452
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1907070833 497 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 536
Cdd:PRK14951 453 AQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
509-605 |
9.03e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 49.81 E-value: 9.03e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 509 PTTPKEPEPTTPKEPEPTTPKepepTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKE-P 587
Cdd:PRK14950 362 PVPAPQPAKPTAAAPSPVRPT----PAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAPKLTRAAiP 437
|
90
....*....|....*...
gi 1907070833 588 EPTTPKEPEPTTTKEPES 605
Cdd:PRK14950 438 VDEKPKYTPPAPPKEEEK 455
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
610-734 |
9.70e-06 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 49.00 E-value: 9.70e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 610 EPEPTTPKEPEPTTPKE---PEPTTPKEPEPTTPKEPEPTTPKEPEPT-TPKEPEPTTPKEPEPTTPKKPEPTTPKEPEP 685
Cdd:NF040712 189 DPDFGRPLRPLATVPRLarePADARPEEVEPAPAAEGAPATDSDPAEAgTPDDLASARRRRAGVEQPEDEPVGPGAAPAA 268
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 1907070833 686 ttpkEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPT 734
Cdd:NF040712 269 ----EPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEP 313
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
572-669 |
1.02e-05 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 49.80 E-value: 1.02e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 572 EPTTPKEPEPTTLKEPEPTTPkepEPTttkepesttrkEPEPTTPKEPEPTTPKEPEPtTPKEPEPTTPKEPEPTTPKEP 651
Cdd:PRK15313 559 EPDEPIIPDPVDPVIPDPVIP---DPV-----------DPDPVDPVIPDPVIPDPVDP-DPVDPEPVDPVIPDPTIPDIG 623
|
90
....*....|....*...
gi 1907070833 652 EPTTPkepePTTPKEPEP 669
Cdd:PRK15313 624 QSDTP----PITEHQFRP 637
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
619-783 |
1.24e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 49.48 E-value: 1.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 619 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK---KPEPTTPKEPEPTTPKEPEPTT 695
Cdd:PRK07994 366 PEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSqllAARQQLQRAQGATKAKKSEPAA 445
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 696 PKEPEPtTPKEPEPTTRKEPEP-TTPKEPEPTTPKEPEPTTPkkpeptttspkTTTLKATTLAPKVTAPAEEIQNKPEET 774
Cdd:PRK07994 446 ASRARP-VNSALERLASVRPAPsALEKAPAKKEAYRWKATNP-----------VEVKKEPVATPKALKKALEHEKTPELA 513
|
....*....
gi 1907070833 775 TPASEDSDD 783
Cdd:PRK07994 514 AKLAAEAIE 522
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
591-684 |
1.25e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 49.42 E-value: 1.25e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 591 TPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKE-PE 668
Cdd:PRK14950 361 VPVPAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVrETATPPPVPPRPVAP--PVPHTPESAPKLTRAAiPV 438
|
90
....*....|....*.
gi 1907070833 669 PTTPKKPEPTTPKEPE 684
Cdd:PRK14950 439 DEKPKYTPPAPPKEEE 454
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
443-562 |
1.38e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 49.33 E-value: 1.38e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 443 PEPTTLKEPEPTTP-KEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 521
Cdd:PRK14951 376 AEKKTPARPEAAAPaAAPVAQAAAAPAPAAA--PAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPA 453
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 1907070833 522 EPEPTTPKEPEPTTPkEPEPTTLKEPEPTTPKEPEPTTPKE 562
Cdd:PRK14951 454 QAAPETVAIPVRVAP-EPAVASAAPAPAAAPAAARLTPTEE 493
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
597-692 |
1.51e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 49.04 E-value: 1.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 597 PTTTKEPESTTRKEPEPTTPKepepTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKK-P 675
Cdd:PRK14950 362 PVPAPQPAKPTAAAPSPVRPT----PAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAPKLTRAAiP 437
|
90
....*....|....*..
gi 1907070833 676 EPTTPKEPEPTTPKEPE 692
Cdd:PRK14950 438 VDEKPKYTPPAPPKEEE 454
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
558-668 |
1.55e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 49.04 E-value: 1.55e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 558 TTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPT-TPKEPEPTTTKEPESTTRKEPEPTTPK-EPEPTTPKEPEPTTPkeP 635
Cdd:PRK14950 343 TTSYGQLPLELAVIEALLVPVPAPQPAKPTAAApSPVRPTPAPSTRPKAAAAANIPPKEPVrETATPPPVPPRPVAP--P 420
|
90 100 110
....*....|....*....|....*....|....
gi 1907070833 636 EPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKEPE 668
Cdd:PRK14950 421 VPHTPESAPKLTRAAiPVDEKPKYTPPAPPKEEE 454
|
|
| NESP55 |
pfam06390 |
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian ... |
411-585 |
1.61e-05 |
|
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian neuroendocrine-specific golgi protein P55 (NESP55) sequences. NESP55 is a novel member of the chromogranin family and is a soluble, acidic, heat-stable secretory protein that is expressed exclusively in endocrine and nervous tissues, although less widely than chromogranins.
Pssm-ID: 115071 [Multi-domain] Cd Length: 261 Bit Score: 47.94 E-value: 1.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 411 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK-EPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 489
Cdd:pfam06390 81 PEPSEPESDHEDEDFEPELARPECLEYDEDDfDTETDSETEPESDIESETEFETEPETEPDTAPTTEPETEPEDEPGPVV 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 490 EPEPT---TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPT 566
Cdd:pfam06390 161 PKGATfhqSLTERLHALKLQSADASPRRAPPSTQEPESAREGEEPERGPLDKDPRDPEEEEEEKEEEKQQPHRCKPKKPA 240
|
170
....*....|....*....
gi 1907070833 567 TLKEPEPTTPKEPEPTTLK 585
Cdd:pfam06390 241 RRRDPSPESPPKKGAIPIR 259
|
|
| MSCRAMM_ClfB |
NF033845 |
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial ... |
488-787 |
1.77e-05 |
|
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468203 [Multi-domain] Cd Length: 871 Bit Score: 49.18 E-value: 1.77e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 488 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTtpKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTT 567
Cdd:NF033845 543 PKDPTPGPPVDPEPSPEPEPEPTPDPEPSPD--PDPEPSPDPDPDSDSDSDSGSDSDSGSDSDSDSDSDSDSDSDSDSDS 620
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 568 LKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPT-TPKEPEPTTPKEPEPTTPKEPEPTTPKEPE-P 645
Cdd:NF033845 621 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDDSdSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDsD 700
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 646 TTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEP 725
Cdd:NF033845 701 SSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 780
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907070833 726 TTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTPASEDSDDSKTT 787
Cdd:NF033845 781 DSDSDSDSDSDSDSDSDSRVTPPNNEQKAPSNPKGEVNHSNKASKQHKTDALPETGDKSENT 842
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
411-506 |
1.81e-05 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 48.69 E-value: 1.81e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 411 PEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTT--PKEPEPTTPKEPEP-TT 487
Cdd:COG3266 265 SAPATTSLGEQQEV-SLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPTAakPVVTETAAPAAPAPeAA 343
|
90
....*....|....*....
gi 1907070833 488 PKEPEPTTPKEPEPTTPKE 506
Cdd:COG3266 344 AAAAAPAAPAVAKKLAADE 362
|
|
| PspC_subgroup_1 |
NF033838 |
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
431-689 |
1.87e-05 |
|
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 48.86 E-value: 1.87e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 431 TPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKE-------PEPTTPKEPEpTTPKEPEPTTPKEPEPTTPKEPEPtt 503
Cdd:NF033838 228 TDREKAEEEAKRRADAKLKEAVEKNVATSEQDKPKRrakrgvlGEPATPDKKE-NDAKSSDSSVGEETLPSPSLKPEK-- 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 504 pKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE------PTTLKEPEPTTPKEpEPTTPKEPEPttLKEP-EPTTP 576
Cdd:NF033838 305 -KVAEAEKKVEEAKKKAKDQKEEDRRNYPTNTYKTLEleiaesDVKVKEAELELVKE-EAKEPRNEEK--IKQAkAKVES 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 577 KEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPeptTPKEPEPTTPKEPEPTTPKEPEPT-TPKEPEPTTPKEPEPTT 655
Cdd:NF033838 381 KKAEATRLEKIKTDRKKAEEEAKRKAAEEDKVKEK---PAEQPQPAPAPQPEKPAPKPEKPAeQPKAEKPADQQAEEDYA 457
|
250 260 270
....*....|....*....|....*....|....
gi 1907070833 656 PKEPEpttpkEPEPTTPKKPePTTPKEPEPTTPK 689
Cdd:NF033838 458 RRSEE-----EYNRLTQQQP-PKTEKPAQPSTPK 485
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
408-567 |
1.99e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 49.17 E-value: 1.99e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 408 RKEPEPTTPKEPEPTTPKEPEPttPKEPEPTTPKEPEPTTlKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 487
Cdd:PHA03247 354 RRRPTWTPPSSLEDLSAGRHHP--KRASLPTRKRRSARHA-ATPFARGPGGDDQTRPAAPVPASVPTPAPTPVPASAPPP 430
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 488 PKEPEPTtpkePEPTTPKEPEPTtpkePEPTTPKEPEPTTPKEPEPTTPKEPEptTLKEPEPTTPKEPEPTTPKEPEPTT 567
Cdd:PHA03247 431 PATPLPS----AEPGSDDGPAPP----PERQPPAPATEPAPDDPDDATRKALD--ALRERRPPEPPGADLAELLGRHPDT 500
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
474-624 |
2.01e-05 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 48.22 E-value: 2.01e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 474 EPEPTTPKEPEPTTPKE---PEPTTPKEPEPTTPKEPEPTTPKEPEPT-TPKEPEPTTPKEPEPTTPKEPEPTTLKEPEP 549
Cdd:NF040712 189 DPDFGRPLRPLATVPRLarePADARPEEVEPAPAAEGAPATDSDPAEAgTPDDLASARRRRAGVEQPEDEPVGPGAAPAA 268
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907070833 550 ttpkEPEPTTPKEPEPTTLKEPEPTTPKEPEpttlkEPEPTTpkePEPTTTKEPESTTRKEPEPTTP---KEPEPTTP 624
Cdd:NF040712 269 ----EPDEATRDAGEPPAPGAAETPEAAEPP-----APAPAA---PAAPAAPEAEEPARPEPPPAPKpkrRRRRASVP 334
|
|
| PspC_subgroup_1 |
NF033838 |
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
593-729 |
2.13e-05 |
|
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 48.86 E-value: 2.13e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 593 KEPEPTTTKEPESTTRKEPEPTTPKEPEPTtpKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 672
Cdd:NF033838 351 KEAELELVKEEAKEPRNEEKIKQAKAKVES--KKAEATRLEKIKTDRKKAEEEAKRKAAEEDKVKEKPAEQPQPAPAPQP 428
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 1907070833 673 KKPEPTTPKEPEPTTPKEPEPTTPKEPE-PTTPKEPEPTTRKEPePTTPKEPEPTTPK 729
Cdd:NF033838 429 EKPAPKPEKPAEQPKAEKPADQQAEEDYaRRSEEEYNRLTQQQP-PKTEKPAQPSTPK 485
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
601-669 |
2.34e-05 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 45.17 E-value: 2.34e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070833 601 KEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 669
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
|
|
| PRK10819 |
PRK10819 |
transport protein TonB; Provisional |
410-517 |
2.45e-05 |
|
transport protein TonB; Provisional
Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 46.98 E-value: 2.45e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 410 EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTLKEPEPTTPKEPEPTTPKEPEPTtpKEPEPTTPKEPEPTTPK 489
Cdd:PRK10819 59 EPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPV-VIPKPEPKPKPKPKPKPKPVKKVEEQPK--REVKPVEPRPASPFENT 135
|
90 100
....*....|....*....|....*...
gi 1907070833 490 EPEPTTPKEPEPTTPKePEPTTPKEPEP 517
Cdd:PRK10819 136 APARPTSSTATAAASK-PVTSVSSGPRA 162
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
547-644 |
2.59e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 48.27 E-value: 2.59e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 547 PEPTTPKEPEPTtPKEPEPTTLKEPEPTTPKEPEPttlKEPEPTTPkePEPTTTKEPESTtrkePEPTTPKEPEPTTPKE 626
Cdd:PRK14950 366 PQPAKPTAAAPS-PVRPTPAPSTRPKAAAAANIPP---KEPVRETA--TPPPVPPRPVAP----PVPHTPESAPKLTRAA 435
|
90
....*....|....*....
gi 1907070833 627 -PEPTTPKEPEPTTPKEPE 644
Cdd:PRK14950 436 iPVDEKPKYTPPAPPKEEE 454
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
524-610 |
2.59e-05 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 48.64 E-value: 2.59e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 524 EPTTPKEPEPTTPKEPEPTTlkePEPTtpkEPEPTTPKEPEPtTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEP 603
Cdd:PRK15313 559 EPDEPIIPDPVDPVIPDPVI---PDPV---DPDPVDPVIPDP-VIPDPVDPDPVDPEPVDPVIPDPTIPDIGQSDTPPIT 631
|
....*..
gi 1907070833 604 ESTTRKE 610
Cdd:PRK15313 632 EHQFRPE 638
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
465-545 |
2.70e-05 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 45.17 E-value: 2.70e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 465 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPttpkEPEPTTL 544
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP----EPGAATL 116
|
.
gi 1907070833 545 K 545
Cdd:pfam05887 117 K 117
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
440-608 |
2.93e-05 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 48.54 E-value: 2.93e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 440 PKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEpTTPKEPEPTTPKEPEPTTPKEPePTTPKEPEPTTPKEPEPTT 519
Cdd:PRK10263 716 PAGANPFSLDDFEFSPMKALLDDGPHEPLFTPIVEPV-QQPQQPVAPQQQYQQPQQPVAP-QPQYQQPQQPVAPQPQYQQ 793
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 520 PKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEP--EPTTPKEPEPT-TLKEP------------EPTTPKePEPTTL 584
Cdd:PRK10263 794 PQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQyqQPQQPVAPQPQdTLLHPllmrngdsrplhKPTTPL-PSLDLL 872
|
170 180
....*....|....*....|....
gi 1907070833 585 KEPepttPKEPEPTTTKEPESTTR 608
Cdd:PRK10263 873 TPP----PSEVEPVDTFALEQMAR 892
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
653-737 |
2.99e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 48.27 E-value: 2.99e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 653 PTTPKEPEPTTPKEPEPTTPKKP--EPTTPKEPEPTTPKEPEPTT-PKEPEPTTPKEPEPTTRKEPEPTTPKE--PEPTT 727
Cdd:PRK14950 362 PVPAPQPAKPTAAAPSPVRPTPApsTRPKAAAAANIPPKEPVRETaTPPPVPPRPVAPPVPHTPESAPKLTRAaiPVDEK 441
|
90
....*....|
gi 1907070833 728 PKEPEPTTPK 737
Cdd:PRK14950 442 PKYTPPAPPK 451
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
548-645 |
3.18e-05 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 48.26 E-value: 3.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 548 EPTTPKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTlkePEPTTPK--EPEPTttkepesttrkEPEPTTPKEPEPTTPK 625
Cdd:PRK15313 559 EPDEPIIPDPVDPVIPDPVI---PDPVDPDPVDPVI---PDPVIPDpvDPDPV-----------DPEPVDPVIPDPTIPD 621
|
90 100
....*....|....*....|
gi 1907070833 626 EPEPTTPkepePTTPKEPEP 645
Cdd:PRK15313 622 IGQSDTP----PITEHQFRP 637
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
556-778 |
3.22e-05 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 48.00 E-value: 3.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 556 EPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPE--PTTPKEPEPTTTKEPESTTRKEPEPTTPKEP-------EPTTPKE 626
Cdd:PLN03209 308 ETTAPLTPMEELLAKIPSQRVPPKESDAADGPKpvPTKPVTPEAPSPPIEEEPPQPKAVVPRPLSPytayedlKPPTSPI 387
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 627 PEPTTPKEPEPTT------PKEPEPTTPKEPEPTTP-KEPEPTTPKEPEPTTP--KKPEPTTPKEPEPTTPKEPEPTTPK 697
Cdd:PLN03209 388 PTPPSSSPASSKSvdavakPAEPDVVPSPGSASNVPeVEPAQVEAKKTRPLSPyaRYEDLKPPTSPSPTAPTGVSPSVSS 467
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 698 EP-EPTTPKEPEPTTRKEPEPTTPKEPEPTTP-------KEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQN 769
Cdd:PLN03209 468 TSsVPAVPDTAPATAATDAAAPPPANMRPLSPyavyddlKPPTSPSPAAPVGKVAPSSTNEVVKVGNSAPPTALADEQHH 547
|
....*....
gi 1907070833 770 KPEETTPAS 778
Cdd:PLN03209 548 AQPKPRPLS 556
|
|
| Pneumo_att_G |
pfam05539 |
Pneumovirinae attachment membrane glycoprotein G; |
516-700 |
3.28e-05 |
|
Pneumovirinae attachment membrane glycoprotein G;
Pssm-ID: 114270 [Multi-domain] Cd Length: 408 Bit Score: 47.74 E-value: 3.28e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 516 EPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEP 595
Cdd:pfam05539 167 EPKTAVTTSKTTSWPTEVSHPTYPSQVTPQSQPATQGHQTATANQRLSSTEPVGTQGTTTSSNPEPQTEPPPSQRGPSGS 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 596 --EPTTTKEPESTTRKEPEPTTPKepePTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTtpkePEPTTPKEPEPTTPK 673
Cdd:pfam05539 247 pqHPPSTTSQDQSTTGDGQEHTQR---RKTP--PATSNRRSPHSTATPPPTTKRQETGRPT----PRPTATTQSGSSPPH 317
|
170 180
....*....|....*....|....*..
gi 1907070833 674 KPEPTTPKEPEPTTPKEPEPTTPKEPE 700
Cdd:pfam05539 318 SSPPGVQANPTTQNLVDCKELDPPKPN 344
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
600-706 |
3.40e-05 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 47.92 E-value: 3.40e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 600 TKEPESTTRKEPEPTTPKEPEPTTPKEPEPttPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT--PKKPEP 677
Cdd:COG3266 255 LKAPSQASSASAPATTSLGEQQEVSLPPAV--AAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPTAakPVVTET 332
|
90 100 110
....*....|....*....|....*....|
gi 1907070833 678 TTPKEPEP-TTPKEPEPTTPKEPEPTTPKE 706
Cdd:COG3266 333 AAPAAPAPeAAAAAAAPAAPAVAKKLAADE 362
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
489-569 |
3.47e-05 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 44.78 E-value: 3.47e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 489 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPttpkEPEPTTL 568
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP----EPGAATL 116
|
.
gi 1907070833 569 K 569
Cdd:pfam05887 117 K 117
|
|
| Pneumo_att_G |
pfam05539 |
Pneumovirinae attachment membrane glycoprotein G; |
500-684 |
3.70e-05 |
|
Pneumovirinae attachment membrane glycoprotein G;
Pssm-ID: 114270 [Multi-domain] Cd Length: 408 Bit Score: 47.74 E-value: 3.70e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 500 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTlkEPEPTTPKep 579
Cdd:pfam05539 167 EPKTAVTTSKTTSWPTEVSHPTYPSQVTPQSQPATQGHQTATANQRLSSTEPVGTQGTTTSSNPEPQT--EPPPSQRG-- 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 580 ePTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKepEPTTPKEPEPTTPKEPEPTTPKEP 659
Cdd:pfam05539 243 -PSGSPQHPPSTTSQDQSTTGDGQEHTQRRKTPPATSNRRSPHSTATPPPTTKR--QETGRPTPRPTATTQSGSSPPHSS 319
|
170 180
....*....|....*....|....*
gi 1907070833 660 EPTTPKEPEPTTPKKPEPTTPKEPE 684
Cdd:pfam05539 320 PPGVQANPTTQNLVDCKELDPPKPN 344
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
449-517 |
3.86e-05 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 44.78 E-value: 3.86e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070833 449 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 517
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
523-620 |
3.90e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 47.88 E-value: 3.90e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 523 PEPTTPKEPEPTtPKEPEPTTLKEPEPTTPKEPEPTTPKepepttlkePEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKE 602
Cdd:PRK14950 366 PQPAKPTAAAPS-PVRPTPAPSTRPKAAAAANIPPKEPV---------RETATPPPVPPRPVAPPVPHTPESAPKLTRAA 435
|
90
....*....|....*....
gi 1907070833 603 -PESTTRKEPEPTTPKEPE 620
Cdd:PRK14950 436 iPVDEKPKYTPPAPPKEEE 454
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
593-661 |
3.93e-05 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 44.78 E-value: 3.93e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070833 593 KEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 661
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
531-785 |
3.95e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 48.24 E-value: 3.95e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 531 PEPTTPKEPEPTTL-KEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTtlkePEPTTPKEPEPTTTKEPESTTRK 609
Cdd:PHA03307 65 FEPPTGPPPGPGTEaPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPP----PPTPPPASPPPSPAPDLSEMLRP 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 610 EPEPTTPKEPEPttPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkepePTTPKEPEPTTPkkpePTTPKEPEPTTPK 689
Cdd:PHA03307 141 VGSPGPPPAASP--PAAGASPAAVASDAASSRQAALPLSSPEETARA----PSSPPAEPPPST----PPAAASPRPPRRS 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 690 EPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPePTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQN 769
Cdd:PHA03307 211 SPISASASSPAPAPGRSAADDAGASSSDSSSSES-SGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSS 289
|
250
....*....|....*.
gi 1907070833 770 KPEETTPASEDSDDSK 785
Cdd:PHA03307 290 SPRERSPSPSPSSPGS 305
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
589-696 |
3.95e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 47.79 E-value: 3.95e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 589 PTTPKEPEPTTTKEPESTTRKEPEPTTPKE----PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 664
Cdd:PRK14951 381 PARPEAAAPAAAPVAQAAAAPAPAAAPAAAasapAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQAAPETV 460
|
90 100 110
....*....|....*....|....*....|..
gi 1907070833 665 KEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTP 696
Cdd:PRK14951 461 AIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
603-716 |
4.02e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 47.79 E-value: 4.02e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 603 PESTTRKEPEPTTP---KEPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPT 678
Cdd:PRK14951 376 AEKKTPARPEAAAPaaaPVAQAAAAPAPAAAPAAAaSAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQA 455
|
90 100 110
....*....|....*....|....*....|....*...
gi 1907070833 679 TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPE 716
Cdd:PRK14951 456 APETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEE 493
|
|
| PTZ00441 |
PTZ00441 |
sporozoite surface protein 2 (SSP2); Provisional |
476-700 |
4.06e-05 |
|
sporozoite surface protein 2 (SSP2); Provisional
Pssm-ID: 240420 [Multi-domain] Cd Length: 576 Bit Score: 47.65 E-value: 4.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 476 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEP 555
Cdd:PTZ00441 279 EEECPVEPEPLPVPAPVPPTPEDDNPRPTDDEFAVPNFNEGLDVPDNPQDPVPPPNEGKDGNPNEENLFPPGDDEVPDES 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 556 E-PTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEpttpKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKE 634
Cdd:PTZ00441 359 NvPPNPPNVPGGSNSEFSSDVENPPNPPNPDIPE----QEPNIPEDSNKEVPEDVPMEPEDDRDNNFNEPKKPENKGDGQ 434
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907070833 635 PEPTTPK--EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEpEPTTPKEPEPTTPKEPE 700
Cdd:PTZ00441 435 NEPVIPKplDNERDQSNKNKQVNPGNRHNSEDRYTRPHGRNNENRNYNNK-NSDIPKHPERSEHEQPE 501
|
|
| dnaA |
PRK14086 |
chromosomal replication initiator protein DnaA; |
410-606 |
4.19e-05 |
|
chromosomal replication initiator protein DnaA;
Pssm-ID: 237605 [Multi-domain] Cd Length: 617 Bit Score: 47.90 E-value: 4.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 410 EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTT-PKEPEPTTPKEPEPTtPKEPEPTTP 488
Cdd:PRK14086 89 DPSAGEPAPPPPHARRTSEPELPRPGRRPYEGYGGPRADDRPPGLPRQDQLPTArPAYPAYQQRPEPGAW-PRAADDYGW 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 489 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP-KEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTT 567
Cdd:PRK14086 168 QQQRLGFPPRAPYASPASYAPEQERDREPYDAGRPEYDQRrRDYDHPRPDWDRPRRDRTDRPEPPPGAGHVHRGGPGPPE 247
|
170 180 190
....*....|....*....|....*....|....*....
gi 1907070833 568 LKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPEST 606
Cdd:PRK14086 248 RDDAPVVPIRPSAPGPLAAQPAPAPGPGEPTARLNPKYT 286
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
587-708 |
4.34e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 47.79 E-value: 4.34e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 587 PEPTTPKEPEPtttkePESTTRKEPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 665
Cdd:PRK14951 376 AEKKTPARPEA-----AAPAAAPVAQAAAAPAPAAAPAAAaSAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPA 450
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 1907070833 666 EPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 708
Cdd:PRK14951 451 PPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEE 493
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
433-501 |
4.63e-05 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 44.40 E-value: 4.63e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070833 433 KEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 501
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
|
|
| PHA03264 |
PHA03264 |
envelope glycoprotein D; Provisional |
630-735 |
4.72e-05 |
|
envelope glycoprotein D; Provisional
Pssm-ID: 223029 [Multi-domain] Cd Length: 416 Bit Score: 47.31 E-value: 4.72e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 630 TTPKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 709
Cdd:PHA03264 253 VVPPYFEESKGYEPPPA-PSGGSPAPPGDDRPEAKPEPGPVEDGAPGRETGGEGEGPEPAGRDGAAGGEPKPGPPRPAPD 331
|
90 100
....*....|....*....|....*..
gi 1907070833 710 TTRKEPEPTTPKEP-EPTTPKEPEPTT 735
Cdd:PHA03264 332 ADRPEGWPSLEAITfPPPTPATPAVPR 358
|
|
| PRK10819 |
PRK10819 |
transport protein TonB; Provisional |
475-604 |
4.89e-05 |
|
transport protein TonB; Provisional
Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 46.21 E-value: 4.89e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 475 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKEPEPttLKEPEPTTPK 553
Cdd:PRK10819 42 PAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPvVIPKPEPKPKPKPKPKPKP--VKKVEEQPKR 119
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 1907070833 554 EPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKePEPTTPKEPEPTTTKEPE 604
Cdd:PRK10819 120 EVKPVEPRPASPFENTAPARPTSSTATAAASK-PVTSVSSGPRALSRNQPQ 169
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
409-477 |
5.10e-05 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 44.40 E-value: 5.10e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070833 409 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 477
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
443-538 |
5.10e-05 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 47.15 E-value: 5.10e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 443 PEPTTLKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT--PKEPEPTTPKEPEP-TT 519
Cdd:COG3266 265 SAPATTSLGEQQEV-SLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPTAakPVVTETAAPAAPAPeAA 343
|
90
....*....|....*....
gi 1907070833 520 PKEPEPTTPKEPEPTTPKE 538
Cdd:COG3266 344 AAAAAPAAPAVAKKLAADE 362
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
505-585 |
5.15e-05 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 44.40 E-value: 5.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 505 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPttpkEPEPTTL 584
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP----EPGAATL 116
|
.
gi 1907070833 585 K 585
Cdd:pfam05887 117 K 117
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
595-698 |
5.15e-05 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 47.15 E-value: 5.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 595 PEPTTTKEPESTTRkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTtpkepePTTPKEPEPTTPKK 674
Cdd:COG3266 265 SAPATTSLGEQQEV-SLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPT------AAKPVVTETAAPAA 337
|
90 100
....*....|....*....|....*
gi 1907070833 675 PEP-TTPKEPEPTTPKEPEPTTPKE 698
Cdd:COG3266 338 PAPeAAAAAAAPAAPAVAKKLAADE 362
|
|
| DUF4045 |
pfam13254 |
Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. ... |
637-776 |
5.27e-05 |
|
Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. This domain family is found in bacteria and eukaryotes, and is typically between 384 and 430 amino acids in length.
Pssm-ID: 433066 [Multi-domain] Cd Length: 415 Bit Score: 47.08 E-value: 5.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 637 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPePTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPE 716
Cdd:pfam13254 197 PNSFKEVTPVGLMRSPAPGGHSKSPSVSGISADSSPTKEEPSEEADT-LSTDKEQSPAPTSASEPPPKTKELPKDSEEPA 275
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907070833 717 PTTPKEPEPTTPKEP--EPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTP 776
Cdd:pfam13254 276 APSKSAEASTEKKEPdtESSPETSSEKSAPSLLSPVSKASIDKPLSSPDRDPLSPKPKPQSP 337
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
425-493 |
5.56e-05 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 44.40 E-value: 5.56e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070833 425 KEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 493
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
411-724 |
6.06e-05 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 47.39 E-value: 6.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 411 PEPTTPKEPEPTTPKEPEPTTPKE---PEPTTPKEPEPTTLKE---PEPTTPKEPE-PTTPKEPEPTTPKEP--EPTTPK 481
Cdd:PRK10263 423 PAPEQPAQQPYYAPAPEQPVAGNAwqaEEQQSTFAPQSTYQTEqtyQQPAAQEPLYqQPQPVEQQPVVEPEPvvEETKPA 502
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 482 EPEPTTPKEPEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTPKEP--EPTTPKEPEPTTLKEPEPTT------- 551
Cdd:PRK10263 503 RPPLYYFEEVEEKRAREREQLAAwYQPIPEPVKEPEPIKSSLKAPSVAAVPpvEAAAAVSPLASGVKKATLATgaaatva 582
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 552 -------------PKEPEPTTPKEPEPTTLKEPeptTPKEPEPTTLKEP------------------------------- 587
Cdd:PRK10263 583 apvfslansggprPQVKEGIGPQLPRPKRIRVP---TRRELASYGIKLPsqraaeekareaqrnqydsgdqynddeidam 659
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 588 ---------------------EPTTPKEPEPTTTKEPESTTRK------------EPEPTTP-----------KEPEPTT 623
Cdd:PRK10263 660 qqdelarqfaqtqqqrygeqyQHDVPVNAEDADAAAEAELARQfaqtqqqrysgeQPAGANPfslddfefspmKALLDDG 739
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 624 PKEP--EPTTPKEPEPTTPKEPEPTTPKEPEPTTP----KEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEpttPK 697
Cdd:PRK10263 740 PHEPlfTPIVEPVQQPQQPVAPQQQYQQPQQPVAPqpqyQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQ---PQ 816
|
410 420
....*....|....*....|....*..
gi 1907070833 698 EPEPTTPKEPEPTTRKEPEPTTPKEPE 724
Cdd:PRK10263 817 YQQPQQPVAPQPQYQQPQQPVAPQPQD 843
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
657-725 |
6.30e-05 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 44.01 E-value: 6.30e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070833 657 KEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEP 725
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
408-504 |
6.41e-05 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 45.76 E-value: 6.41e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 408 RKEPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPt 486
Cdd:PRK11633 50 RDEPDMMPAaTQALPTQPPEGAAEAVRAGDAAAP-SLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQKVEA- 127
|
90
....*....|....*...
gi 1907070833 487 tPKEPEPTTPKEPEPTTP 504
Cdd:PRK11633 128 -PPAPKPEPKPVVEEKAA 144
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
410-528 |
6.91e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 47.18 E-value: 6.91e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 410 EPEPTTPKEPEPTTP---KEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEP--TTPKEPEPTTPKEPE 484
Cdd:PRK12323 449 APAPAPAAAPAAAARpaaAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPaqPDAAPAGWVAESIPD 528
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1907070833 485 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE--PTTPKEPEPTTP 528
Cdd:PRK12323 529 PATADPDDAFETLAPAPAAAPAPRAAAATEPVvaPRPPRASASGLP 574
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
435-530 |
7.39e-05 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 46.77 E-value: 7.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 435 PEPTTPKEPEPTTLkepEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT--PKEPEPTTPKEPEP-TT 511
Cdd:COG3266 267 PATTSLGEQQEVSL---PPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPTAakPVVTETAAPAAPAPeAA 343
|
90
....*....|....*....
gi 1907070833 512 PKEPEPTTPKEPEPTTPKE 530
Cdd:COG3266 344 AAAAAPAAPAVAKKLAADE 362
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
649-717 |
7.56e-05 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 44.01 E-value: 7.56e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070833 649 KEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEP 717
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
|
|
| PRK13108 |
PRK13108 |
prolipoprotein diacylglyceryl transferase; Reviewed |
416-564 |
7.68e-05 |
|
prolipoprotein diacylglyceryl transferase; Reviewed
Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 46.51 E-value: 7.68e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 416 PKEPEPTT-PKEPEPTTPKEPEPTTPKEP-EPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPEP 493
Cdd:PRK13108 295 ALEREPAElAAAAVASAASAVGPVGPGEPnQPDDVAEAVKAEVAEVTDEVAAESVVQVADRDGESTPA-VEETSEADIER 373
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907070833 494 TTPKEPEPTTPKEPEPTTPKEPE-PTTPKEPEPTTPKEPEPTTPKEPEPTT-LKEPEPTTPKEPEPtTPKEPE 564
Cdd:PRK13108 374 EQPGDLAGQAPAAHQVDAEAASAaPEEPAALASEAHDETEPEVPEKAAPIPdPAKPDELAVAGPGD-DPAEPD 445
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
571-666 |
7.85e-05 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 46.77 E-value: 7.85e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 571 PEPTTPKEPEPTTLkepEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTT--PKEPEPTTPKEPEP-TT 647
Cdd:COG3266 267 PATTSLGEQQEVSL---PPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPTAakPVVTETAAPAAPAPeAA 343
|
90
....*....|....*....
gi 1907070833 648 PKEPEPTTPKEPEPTTPKE 666
Cdd:COG3266 344 AAAAAPAAPAVAKKLAADE 362
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
633-701 |
7.85e-05 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 43.63 E-value: 7.85e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070833 633 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEP 701
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
|
|
| PRK10819 |
PRK10819 |
transport protein TonB; Provisional |
522-661 |
8.89e-05 |
|
transport protein TonB; Provisional
Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 45.44 E-value: 8.89e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 522 EPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPkEPEPTTPKEPEPTTLKEPEPTTPKepepttlkePEPTTPKEPEPTTTK 601
Cdd:PRK10819 36 HQVIELPAPAQPISVTMVAPADLEPPQAVQP-PPEPVVEPEPEPEPIPEPPKEAPV---------VIPKPEPKPKPKPKP 105
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 602 EPESTTRKEPEPTtpKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPEP 661
Cdd:PRK10819 106 KPKPVKKVEEQPK--REVKPVEPRPASPFENTAPARPTSSTATAAASK-PVTSVSSGPRA 162
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
405-482 |
8.91e-05 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 46.81 E-value: 8.91e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907070833 405 STTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 482
Cdd:PRK12270 40 STAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
|
| dnaA |
PRK14086 |
chromosomal replication initiator protein DnaA; |
451-646 |
8.96e-05 |
|
chromosomal replication initiator protein DnaA;
Pssm-ID: 237605 [Multi-domain] Cd Length: 617 Bit Score: 46.74 E-value: 8.96e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 451 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT-PKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTPK 529
Cdd:PRK14086 98 PPPHARRTSEPELPRPGRRPYEGYGGPRADDRPPGLPRQDQLPTArPAYPAYQQRPEPGAW-PRAADDYGWQQQRLGFPP 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 530 EPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTlkEPEPTTPKEpEPTTLKEPEPTTPKEPEptTTKEPESTTRK 609
Cdd:PRK14086 177 RAPYASPASYAPEQERDREPYDAGRPEYDQRRRDYDHP--RPDWDRPRR-DRTDRPEPPPGAGHVHR--GGPGPPERDDA 251
|
170 180 190
....*....|....*....|....*....|....*..
gi 1907070833 610 EPEPTTPKEPEPTtPKEPEPTtPKEPEPTTPKEPEPT 646
Cdd:PRK14086 252 PVVPIRPSAPGPL-AAQPAPA-PGPGEPTARLNPKYT 286
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
577-682 |
9.40e-05 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 46.38 E-value: 9.40e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 577 KEPEPTTLKEPEPTTPKEPEPTTTKEPESttRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT--PKEPEPT 654
Cdd:COG3266 256 KAPSQASSASAPATTSLGEQQEVSLPPAV--AAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPTAakPVVTETA 333
|
90 100
....*....|....*....|....*....
gi 1907070833 655 TPKEPEP-TTPKEPEPTTPKKPEPTTPKE 682
Cdd:COG3266 334 APAAPAPeAAAAAAAPAAPAVAKKLAADE 362
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
618-767 |
9.46e-05 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 45.91 E-value: 9.46e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 618 EPEPTTPKEPEPTTPKE---PEPTTPKEPEPTTPKEPEPTTPKEPEPT-TPKEPEPTTPKKPEPTTPKEPEPTTPKEPEP 693
Cdd:NF040712 189 DPDFGRPLRPLATVPRLarePADARPEEVEPAPAAEGAPATDSDPAEAgTPDDLASARRRRAGVEQPEDEPVGPGAAPAA 268
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1907070833 694 ttpkEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPA-EEI 767
Cdd:NF040712 269 ----EPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKPKRRRRRASVPSwDDV 339
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
571-650 |
9.86e-05 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 46.81 E-value: 9.86e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 571 PEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 650
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
617-685 |
1.04e-04 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 43.63 E-value: 1.04e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070833 617 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEP 685
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
427-522 |
1.05e-04 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 46.38 E-value: 1.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 427 PEPTTPKEPEPTTPkEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT--PKEPEPTTPKEPEP-TT 503
Cdd:COG3266 265 SAPATTSLGEQQEV-SLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPTAakPVVTETAAPAAPAPeAA 343
|
90
....*....|....*....
gi 1907070833 504 PKEPEPTTPKEPEPTTPKE 522
Cdd:COG3266 344 AAAAAPAAPAVAKKLAADE 362
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
537-650 |
1.07e-04 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 46.38 E-value: 1.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 537 KEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTlkEPEPTTPKEPEPTTLkepePTTPkePEPTTTKEPESTTRKEPEPTTP 616
Cdd:COG3266 256 KAPSQASSASAPATTSLGEQQEVSLPPAVAA--QPAAAAAAQPSAVAL----PAAP--AAAAAAAAPAEAAAPQPTAAKP 327
|
90 100 110
....*....|....*....|....*....|....*
gi 1907070833 617 KEPEPTTPKEPEP-TTPKEPEPTTPKEPEPTTPKE 650
Cdd:COG3266 328 VVTETAAPAAPAPeAAAAAAAPAAPAVAKKLAADE 362
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
547-664 |
1.08e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 46.25 E-value: 1.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 547 PEPTTPKEPEPTTP-KEPEPTTlkePEPTTPKEPEPTTLKEP-EPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTP 624
Cdd:PRK14951 376 AEKKTPARPEAAAPaAAPVAQA---AAAPAPAAAPAAAASAPaAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPP 452
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1907070833 625 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 664
Cdd:PRK14951 453 AQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
498-648 |
1.11e-04 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 45.91 E-value: 1.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 498 EPEPTTPKEPEPTTPKE---PEPTTPKEPEPTTPKEPEPTTPKEPEPT-TLKEPEPTTPKEPEPTTPKEPEPTTLKEPEP 573
Cdd:NF040712 189 DPDFGRPLRPLATVPRLarePADARPEEVEPAPAAEGAPATDSDPAEAgTPDDLASARRRRAGVEQPEDEPVGPGAAPAA 268
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1907070833 574 ttpkEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTpkEPEPTTPKEPEPttPKEPEPTTPKePEPTTP 648
Cdd:NF040712 269 ----EPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPA--APEAEEPARPEP--PPAPKPKRRR-RRASVP 334
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
603-778 |
1.11e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 46.49 E-value: 1.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 603 PESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKE 682
Cdd:PRK14948 366 SEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATT--PSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLNLEE 443
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 683 ---------PEPTT------------------------------------------------------PKEPEPTTPKEP 699
Cdd:PRK14948 444 lwqqilaklELPSTrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnleSQSGSASNTAKT 523
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070833 700 EPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKKpeptttspktttlkATTLAPKVTAPAEEIQNKPEETTPAS 778
Cdd:PRK14948 524 PPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQA--------------SSNAPAQIPADSSPPPPIPEEPTPSP 588
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
411-492 |
1.13e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 46.34 E-value: 1.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 411 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK-EPEPTTLKEPEPTTPkePEPTTPKEPEPTTPKE-PEPTTPKEPEPTTP 488
Cdd:PRK14950 373 AAAPSPVRPTPAPSTRPKAAAAANIPPKEPVrETATPPPVPPRPVAP--PVPHTPESAPKLTRAAiPVDEKPKYTPPAPP 450
|
....
gi 1907070833 489 KEPE 492
Cdd:PRK14950 451 KEEE 454
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
608-704 |
1.15e-04 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 44.99 E-value: 1.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 608 RKEPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPt 686
Cdd:PRK11633 50 RDEPDMMPAaTQALPTQPPEGAAEAVRAGDAAAP-SLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQKVEA- 127
|
90
....*....|....*...
gi 1907070833 687 tPKEPEPTTPKEPEPTTP 704
Cdd:PRK11633 128 -PPAPKPEPKPVVEEKAA 144
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
467-562 |
1.19e-04 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 46.00 E-value: 1.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 467 PEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT--PKEPEPTTPKEPEPTTL 544
Cdd:COG3266 265 SAPATTSLGEQQEV-SLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPTAakPVVTETAAPAAPAPEAA 343
|
90
....*....|....*....
gi 1907070833 545 K-EPEPTTPKEPEPTTPKE 562
Cdd:COG3266 344 AaAAAPAAPAVAKKLAADE 362
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
405-484 |
1.21e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 46.34 E-value: 1.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 405 STTRKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKEP 483
Cdd:PRK14950 375 APSPVRPTPAPSTRPKAAAAANIPPKEPV-RETATPPPVPPRPVAPPVPHTPESAPKLTRAAiPVDEKPKYTPPAPPKEE 453
|
.
gi 1907070833 484 E 484
Cdd:PRK14950 454 E 454
|
|
| PRK10819 |
PRK10819 |
transport protein TonB; Provisional |
627-737 |
1.24e-04 |
|
transport protein TonB; Provisional
Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 45.06 E-value: 1.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 627 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTtPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 706
Cdd:PRK10819 42 PAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEPEPEPIPEPP-KEAPVVIPKPEPKPKPKPKPKPKPVKKVEEQPKRE 120
|
90 100 110
....*....|....*....|....*....|.
gi 1907070833 707 PEPTTRKEPEPTTPKEPEPTTPKEPEPTTPK 737
Cdd:PRK10819 121 VKPVEPRPASPFENTAPARPTSSTATAAASK 151
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
563-658 |
1.27e-04 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 46.00 E-value: 1.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 563 PEPTTLKEPEPTTPkEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTT--PKEPEPTTPKEPEP-TT 639
Cdd:COG3266 265 SAPATTSLGEQQEV-SLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPTAakPVVTETAAPAAPAPeAA 343
|
90
....*....|....*....
gi 1907070833 640 PKEPEPTTPKEPEPTTPKE 658
Cdd:COG3266 344 AAAAAPAAPAVAKKLAADE 362
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
611-709 |
1.31e-04 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 44.61 E-value: 1.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 611 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPK 689
Cdd:PRK11633 45 PKPGDRDEPDMMPAaTQALPTQPPEGAAEAVRAGDAAAP-SLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQ 123
|
90 100
....*....|....*....|
gi 1907070833 690 EPEPTTPKEPEPTTPKEPEP 709
Cdd:PRK11633 124 KVEAPPAPKPEPKPVVEEKA 143
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
585-653 |
1.42e-04 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 43.24 E-value: 1.42e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070833 585 KEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 653
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
|
|
| PHA03379 |
PHA03379 |
EBNA-3A; Provisional |
416-659 |
1.45e-04 |
|
EBNA-3A; Provisional
Pssm-ID: 223066 [Multi-domain] Cd Length: 935 Bit Score: 46.20 E-value: 1.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 416 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 495
Cdd:PHA03379 408 ASEPTYGTPRPPVEKPRPEVPQSLETATSHGSAQVPEPPPVHDLEPGPLHDQHSMAPCPVAQLPPGPLQDLEPGDQLPGV 487
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 496 PKEPEPTTPKEPEPT----TPKEPEPT-TPKEPEPTTPKEPEPTTPkEPEPTTLKEpEPTTPKEPEPTTPKEPEPTTLKE 570
Cdd:PHA03379 488 VQDGRPACAPVPAPAgpivRPWEASLSqVPGVAFAPVMPQPMPVEP-VPVPTVALE-RPVCPAPPLIAMQGPGETSGIVR 565
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 571 PEPTTpkEPEPTTlkepePTTPKEPEPTTTKEPESTTRKEPEP-TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 649
Cdd:PHA03379 566 VRERW--RPAPWT-----PNPPRSPSQMSVRDRLARLRAEAQPyQASVEVQPPQLTQVSPQQPMEYPLEPEQQMFPGSPF 638
|
250
....*....|
gi 1907070833 650 EPEPTTPKEP 659
Cdd:PHA03379 639 SQVADVMRAG 648
|
|
| PRK08691 |
PRK08691 |
DNA polymerase III subunits gamma and tau; Validated |
405-581 |
1.48e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 45.85 E-value: 1.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 405 STTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKePEPTTPKEPEPTTPKEPEPTTPKEPE 484
Cdd:PRK08691 400 AETAQTPVQTASAAAMPSEGKTAGPVSNQENNDVPPWEDAPDEAQTAAGTAQT-SAKSIQTASEAETPPENQVSKNKAAD 478
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 485 PTTPKEPEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE---PEPTTLKEPEPTTPKEPEpttp 560
Cdd:PRK08691 479 NETDAPLSEVPSENPIQATPnDEAVETETFAHEAPAEPFYGYGFPDNDCPPEDGAeipPPDWEHAAPADTAGGGAD---- 554
|
170 180
....*....|....*....|.
gi 1907070833 561 KEPEPTTLKEPEptTPKEPEP 581
Cdd:PRK08691 555 EEAEAGGIGGNN--TPSAPPP 573
|
|
| PTZ00441 |
PTZ00441 |
sporozoite surface protein 2 (SSP2); Provisional |
572-732 |
1.50e-04 |
|
sporozoite surface protein 2 (SSP2); Provisional
Pssm-ID: 240420 [Multi-domain] Cd Length: 576 Bit Score: 45.73 E-value: 1.50e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 572 EPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 651
Cdd:PTZ00441 279 EEECPVEPEPLPVPAPVPPTPEDDNPRPTDDEFAVPNFNEGLDVPDNPQDPVPPPNEGKDGNPNEENLFPPGDDEVPDES 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 652 epttpkePEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEpttpKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEP 731
Cdd:PTZ00441 359 -------NVPPNPPNVPGGSNSEFSSDVENPPNPPNPDIPE----QEPNIPEDSNKEVPEDVPMEPEDDRDNNFNEPKKP 427
|
.
gi 1907070833 732 E 732
Cdd:PTZ00441 428 E 428
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
441-546 |
1.51e-04 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 45.61 E-value: 1.51e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 441 KEPEPTTLKEPEPTTPKEPEPTTPKEPEPttPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT--PKEPEPT 518
Cdd:COG3266 256 KAPSQASSASAPATTSLGEQQEVSLPPAV--AAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPTAakPVVTETA 333
|
90 100
....*....|....*....|....*....
gi 1907070833 519 TPKEPEP-TTPKEPEPTTPKEPEPTTLKE 546
Cdd:COG3266 334 APAAPAPeAAAAAAAPAAPAVAKKLAADE 362
|
|
| PHA03369 |
PHA03369 |
capsid maturational protease; Provisional |
619-722 |
1.52e-04 |
|
capsid maturational protease; Provisional
Pssm-ID: 223061 [Multi-domain] Cd Length: 663 Bit Score: 46.15 E-value: 1.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 619 PEPTTPKEP--EPTTPKEPEP-TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEP-EPTTPKEPEPT 694
Cdd:PHA03369 354 TAPSRVLAAaaKVAVIAAPQThTGPADRQRPQRPDGIPYSVPARSPMTAYPPVPQFCGDPGLVSPYNPqSPGTSYGPEPV 433
|
90 100
....*....|....*....|....*...
gi 1907070833 695 TPKEPEPTTPKEPEPTTRKEPEPTTPKE 722
Cdd:PHA03369 434 GPVPPQPTNPYVMPISMANMVYPGHPQE 461
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
630-730 |
1.54e-04 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 45.61 E-value: 1.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 630 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTtpkkPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 709
Cdd:COG3266 265 SAPATTSLGEQQEVSLPPAVAAQPAAAAAAQPSAVALPAAP----AAAAAAAAPAEAAAPQPTAAKPVVTETAAPAAPAP 340
|
90 100
....*....|....*....|..
gi 1907070833 710 -TTRKEPEPTTPKEPEPTTPKE 730
Cdd:COG3266 341 eAAAAAAAPAAPAVAKKLAADE 362
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
529-609 |
1.60e-04 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 42.86 E-value: 1.60e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 529 KEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPttlkEPEPTTPKEPEPTTTKEPESTTR 608
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP----EPEPEPEPEPEPEPEPEPGAATL 116
|
.
gi 1907070833 609 K 609
Cdd:pfam05887 117 K 117
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
557-656 |
1.66e-04 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 44.22 E-value: 1.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 557 PTTPK---EPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEP--EPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTT 631
Cdd:PRK11633 42 PLVPKpgdRDEPDMMPAATQALPTQPPEGAAEAVRAGDAAAPslDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKP 121
|
90 100
....*....|....*....|....*
gi 1907070833 632 PKEPEPttPKEPEPTTPKEPEPTTP 656
Cdd:PRK11633 122 QQKVEA--PPAPKPEPKPVVEEKAA 144
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
577-645 |
1.66e-04 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 42.86 E-value: 1.66e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070833 577 KEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 645
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
|
|
| PRK14949 |
PRK14949 |
DNA polymerase III subunits gamma and tau; Provisional |
408-555 |
1.68e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237863 [Multi-domain] Cd Length: 944 Bit Score: 45.87 E-value: 1.68e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 408 RKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT--PKEPEP 485
Cdd:PRK14949 637 KKSSADRKPKTPPSRAPPASLSKPASSPDASQTSASFDLDPDFELATHQSVPEAALASGSAPAPPPVPDPYDrpPWEEAP 716
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907070833 486 TTpkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE--PTTPKEPEPTTPKEPEPTTLKEPEPTTPKEP 555
Cdd:PRK14949 717 EV--ASANDGPNNAAEGNLSESVEDASNSELQAVEQQAThqPQVQAEAQSPASTTALTQTSSEVQDTELNLV 786
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
406-461 |
1.81e-04 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 42.86 E-value: 1.81e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070833 406 TTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEP 461
Cdd:pfam05887 54 TNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
|
|
| PHA03264 |
PHA03264 |
envelope glycoprotein D; Provisional |
462-567 |
1.88e-04 |
|
envelope glycoprotein D; Provisional
Pssm-ID: 223029 [Multi-domain] Cd Length: 416 Bit Score: 45.38 E-value: 1.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 462 TTPKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 541
Cdd:PHA03264 253 VVPPYFEESKGYEPPPA-PSGGSPAPPGDDRPEAKPEPGPVEDGAPGRETGGEGEGPEPAGRDGAAGGEPKPGPPRPAPD 331
|
90 100
....*....|....*....|....*..
gi 1907070833 542 TTLKEPEPTTPKEP-EPTTPKEPEPTT 567
Cdd:PHA03264 332 ADRPEGWPSLEAITfPPPTPATPAVPR 358
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
589-777 |
1.92e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 45.64 E-value: 1.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 589 PTTPKEPEPTTTKEPESTTRKEPEPTTPkepEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 668
Cdd:PRK12323 375 ATAAAAPVAQPAPAAAAPAAAAPAPAAP---PAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPA 451
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 669 PTTPKKPEPTTP---KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTTS 745
Cdd:PRK12323 452 PAPAAAPAAAARpaaAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPAT 531
|
170 180 190
....*....|....*....|....*....|..
gi 1907070833 746 PKTTTLKATTLAPKVTAPAEEIQNKPEETTPA 777
Cdd:PRK12323 532 ADPDDAFETLAPAPAAAPAPRAAAATEPVVAP 563
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
533-760 |
1.92e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 46.08 E-value: 1.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 533 PTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTT-PKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEP 611
Cdd:PHA03247 255 PAPPPVVGEGADRAPETARGATGPPPPPEAAAPNGAAAPPDGVwGAALAGAPLALPAPPDPPPPAPAGDAEEEDDEDGAM 334
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 612 EPTTPKepepTTPKEPEPTT-PKEPEPTTpkepepTTPKEPEPTTPKEPEPttPKEPEPTTPKKPEPTTpKEPEPTTPKE 690
Cdd:PHA03247 335 EVVSPL----PRPRQHYPLGfPKRRRPTW------TPPSSLEDLSAGRHHP--KRASLPTRKRRSARHA-ATPFARGPGG 401
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907070833 691 PEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPT-TPKEPE-PTTPKKPEPTTTSPKTTTLKATTLAPKV 760
Cdd:PHA03247 402 DDQTRPAAPVPASVPTPAPTPVPASAPPPPATPLPSaEPGSDDgPAPPPERQPPAPATEPAPDDPDDATRKA 473
|
|
| Pneumo_att_G |
pfam05539 |
Pneumovirinae attachment membrane glycoprotein G; |
414-580 |
2.02e-04 |
|
Pneumovirinae attachment membrane glycoprotein G;
Pssm-ID: 114270 [Multi-domain] Cd Length: 408 Bit Score: 45.04 E-value: 2.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 414 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTpkepEPTTPKEPEPTTPKEPeP 493
Cdd:pfam05539 177 TTSWPTEVSHPTYPSQVTPQSQPATQGHQTATANQRLSSTEPVGTQGTTTSSNPEPQT----EPPPSQRGPSGSPQHP-P 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 494 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE------PEPTTLKEPEPTTPKEPEPTTPKEPEPTT 567
Cdd:pfam05539 252 STTSQDQSTTGDGQEHTQRRKTPPATSNRRSPHSTATPPPTTKRQetgrptPRPTATTQSGSSPPHSSPPGVQANPTTQN 331
|
170
....*....|...
gi 1907070833 568 LKEPEPTTPKEPE 580
Cdd:pfam05539 332 LVDCKELDPPKPN 344
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
547-626 |
2.02e-04 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 45.65 E-value: 2.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 547 PEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKE 626
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
557-652 |
2.08e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 45.57 E-value: 2.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 557 PTTPKEPEPTTLKEPEPTTPK--EPEPTTLKEPEPTTPKEPEPTTTKEPESTtrkePEPTTPkePEPTTPKEPEPTTPKE 634
Cdd:PRK14950 362 PVPAPQPAKPTAAAPSPVRPTpaPSTRPKAAAAANIPPKEPVRETATPPPVP----PRPVAP--PVPHTPESAPKLTRAA 435
|
90
....*....|....*....
gi 1907070833 635 -PEPTTPKEPEPTTPKEPE 652
Cdd:PRK14950 436 iPVDEKPKYTPPAPPKEEE 454
|
|
| PRK14949 |
PRK14949 |
DNA polymerase III subunits gamma and tau; Provisional |
488-643 |
2.18e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237863 [Multi-domain] Cd Length: 944 Bit Score: 45.49 E-value: 2.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 488 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE--PTTLKEPEPTTPKEPEPTTPKEPEP 565
Cdd:PRK14949 637 KKSSADRKPKTPPSRAPPASLSKPASSPDASQTSASFDLDPDFELATHQSVPEaaLASGSAPAPPPVPDPYDRPPWEEAP 716
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907070833 566 TTlkEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPesttrkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 643
Cdd:PRK14949 717 EV--ASANDGPNNAAEGNLSESVEDASNSELQAVEQQA------THQPQVQAEAQSPASTTALTQTSSEVQDTELNLV 786
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
569-637 |
2.37e-04 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 42.47 E-value: 2.37e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070833 569 KEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 637
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
|
|
| dnaA |
PRK14086 |
chromosomal replication initiator protein DnaA; |
464-686 |
2.47e-04 |
|
chromosomal replication initiator protein DnaA;
Pssm-ID: 237605 [Multi-domain] Cd Length: 617 Bit Score: 45.20 E-value: 2.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 464 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkepePTTPKEPEPttpkePEPTT 543
Cdd:PRK14086 87 TVDPSAGEPAPPPPHARRTSEPELPRPGRRPYEGYGGPRADDRPPGLPRQDQLPTAR----PAYPAYQQR-----PEPGA 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 544 LKEPEPTTPKEPEPTTPKEPEPttlkepePTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRkePEPTTPKEPEPTT 623
Cdd:PRK14086 158 WPRAADDYGWQQQRLGFPPRAP-------YASPASYAPEQERDREPYDAGRPEYDQRRRDYDHPR--PDWDRPRRDRTDR 228
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907070833 624 PkEPEPTTPKEPEPTTPKEPEPTTPKEPEptTPKEPEPtTPKEPEPtTPKKPEPTTPKEPEPT 686
Cdd:PRK14086 229 P-EPPPGAGHVHRGGPGPPERDDAPVVPI--RPSAPGP-LAAQPAP-APGPGEPTARLNPKYT 286
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
353-733 |
2.55e-04 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 45.46 E-value: 2.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 353 PKEPEPTTPKEPPPTTKKPEPTTPKEPEPTTPKEPEPTTTKEPEPTTTKEPESTTRKEPEPTtpkePEPTTPKEPEPTTP 432
Cdd:PRK10263 374 APAPEGYPQQSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYA----PAPEQPVAGNAWQA 449
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 433 KEPEPttPKEPEPTTLKE---PEPTTPKEPE-PTTPKEPEPTTPKEP--EPTTPKEPEPTTPKEPEPTTPKEPEPTTP-K 505
Cdd:PRK10263 450 EEQQS--TFAPQSTYQTEqtyQQPAAQEPLYqQPQPVEQQPVVEPEPvvEETKPARPPLYYFEEVEEKRAREREQLAAwY 527
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 506 EPEPTTPKEPEPTTPKEPEPTTPKEP--EPTTPKEPEPTTLKEPEPTT--------------------PKEPEPTTPKEP 563
Cdd:PRK10263 528 QPIPEPVKEPEPIKSSLKAPSVAAVPpvEAAAAVSPLASGVKKATLATgaaatvaapvfslansggprPQVKEGIGPQLP 607
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 564 EPTTLKEPeptTPKEPEPTTLKEPEPTTPKE------------------------------------------------- 594
Cdd:PRK10263 608 RPKRIRVP---TRRELASYGIKLPSQRAAEEkareaqrnqydsgdqynddeidamqqdelarqfaqtqqqrygeqyqhdv 684
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 595 ----------PEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP--EPTTPKEPEPTTPKEPEPT 662
Cdd:PRK10263 685 pvnaedadaaAEAELARQFAQTQQQRYSGEQPAGANPFSLDDFEFSPMKALLDDGPHEPlfTPIVEPVQQPQQPVAPQQQ 764
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070833 663 TPKEPEPTTP----KKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEP--EPTTPKEPEP 733
Cdd:PRK10263 765 YQQPQQPVAPqpqyQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQyqQPQQPVAPQP 841
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
410-490 |
2.57e-04 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 44.84 E-value: 2.57e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 410 EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTT--PKEPEPTTPKEPEP-TTPKEPEPTTPKEPEPT 486
Cdd:COG3266 279 SLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPTAakPVVTETAAPAAPAPeAAAAAAAPAAPAVAKKL 358
|
....
gi 1907070833 487 TPKE 490
Cdd:COG3266 359 AADE 362
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
405-565 |
2.61e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 45.23 E-value: 2.61e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 405 STTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP---- 480
Cdd:PRK07003 438 RGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPaaas 517
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 481 KEPEPTTPKEPEPTTPkEPEPTTPKEP--------------------------EPTTPKEPEPTTPKEPEPTTPKEPEPT 534
Cdd:PRK07003 518 REDAPAAAAPPAPEAR-PPTPAAAAPAaraggaaaaldvlrnagmrvssdrgaRAAAAAKPAAAPAAAPKPAAPRVAVQV 596
|
170 180 190
....*....|....*....|....*....|..
gi 1907070833 535 -TPKEPEPTTLKEPEPTTPKEPEPTTPKEPEP 565
Cdd:PRK07003 597 pTPRARAATGDAPPNGAARAEQAAESRGAPPP 628
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
481-549 |
2.79e-04 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 42.09 E-value: 2.79e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070833 481 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEP 549
Cdd:pfam05887 43 KGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 111
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
410-592 |
2.83e-04 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 44.92 E-value: 2.83e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 410 EPEPTTPKEPEPTTPKEPE-----------------------PTTPKEPEPTTPKEPEPTTL----KEPEPTTPKEPEPT 462
Cdd:PLN03209 340 KPVPTKPVTPEAPSPPIEEeppqpkavvprplspytayedlkPPTSPIPTPPSSSPASSKSVdavaKPAEPDVVPSPGSA 419
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 463 T---PKEPEPTTPKEPEPTTP--KEPEPTTPKEPEPTTPKEPEPTT------PKEPEPTTPKEPEPTTPKEPEPTTPKEP 531
Cdd:PLN03209 420 SnvpEVEPAQVEAKKTRPLSPyaRYEDLKPPTSPSPTAPTGVSPSVsstssvPAVPDTAPATAATDAAAPPPANMRPLSP 499
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070833 532 EPTTPKEPEPTTlkePEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTP 592
Cdd:PLN03209 500 YAVYDDLKPPTS---PSPAAPVGKVAPSSTNEVVKVGNSAPPTALADEQHHAQPKPRPLSP 557
|
|
| PRK10819 |
PRK10819 |
transport protein TonB; Provisional |
635-738 |
3.04e-04 |
|
transport protein TonB; Provisional
Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 43.90 E-value: 3.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 635 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKE 714
Cdd:PRK10819 42 PAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEPEPEPIPEPP-KEAPVVIPKPEPKPKPKPKPKPKPVKKVEEQPKRE 120
|
90 100
....*....|....*....|....
gi 1907070833 715 PEPTTPKEPEPTTPKEPEPTTPKK 738
Cdd:PRK10819 121 VKPVEPRPASPFENTAPARPTSST 144
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
459-560 |
3.29e-04 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 43.45 E-value: 3.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 459 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 537
Cdd:PRK11633 45 PKPGDRDEPDMMPAaTQALPTQPPEGAAEAVRAGDAAAP-SLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQ 123
|
90 100
....*....|....*....|...
gi 1907070833 538 EPEPTTlkEPEPTTPKEPEPTTP 560
Cdd:PRK11633 124 KVEAPP--APKPEPKPVVEEKAA 144
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
573-689 |
3.29e-04 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 43.45 E-value: 3.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 573 PTTPK---EPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPttpkepepttpkepEPTTPK 649
Cdd:PRK11633 42 PLVPKpgdRDEPDMMPAATQALPTQPPEGAAEAVRAGDAAAPSLDPATVAPPNTPVEPEP--------------APVEPP 107
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1907070833 650 EPEPTTPKEPEPTTPKEPEPTTPKKPEPtTPKEPEPTTPK 689
Cdd:PRK11633 108 KPKPVEKPKPKPKPQQKVEAPPAPKPEP-KPVVEEKAAPT 146
|
|
| PRK13108 |
PRK13108 |
prolipoprotein diacylglyceryl transferase; Reviewed |
464-616 |
3.37e-04 |
|
prolipoprotein diacylglyceryl transferase; Reviewed
Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 44.58 E-value: 3.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 464 PKEPEPTT-PKEPEPTTPKEPEPTTPKEP-EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP--KEP 539
Cdd:PRK13108 295 ALEREPAElAAAAVASAASAVGPVGPGEPnQPDDVAEAVKAEVAEVTDEVAAESVVQVADRDGESTPAVEETSEAdiERE 374
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070833 540 EPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPtTPKEPEPTTTKEPesttrkEPEPTTP 616
Cdd:PRK13108 375 QPGDLAGQAPAAHQVDAEAASAAPEEPAALASEAHDETEPEVPEKAAPIP-DPAKPDELAVAGP------GDDPAEP 444
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
635-736 |
3.44e-04 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 43.45 E-value: 3.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 635 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTPKKpEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRK 713
Cdd:PRK11633 45 PKPGDRDEPDMMPAaTQALPTQPPEGAAEAVRAGDAAAPSL-DPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQ 123
|
90 100
....*....|....*....|...
gi 1907070833 714 EPEPttPKEPEPTTPKEPEPTTP 736
Cdd:PRK11633 124 KVEA--PPAPKPEPKPVVEEKAA 144
|
|
| PHA03264 |
PHA03264 |
envelope glycoprotein D; Provisional |
414-519 |
3.48e-04 |
|
envelope glycoprotein D; Provisional
Pssm-ID: 223029 [Multi-domain] Cd Length: 416 Bit Score: 44.61 E-value: 3.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 414 TTPKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 493
Cdd:PHA03264 253 VVPPYFEESKGYEPPPA-PSGGSPAPPGDDRPEAKPEPGPVEDGAPGRETGGEGEGPEPAGRDGAAGGEPKPGPPRPAPD 331
|
90 100
....*....|....*....|....*..
gi 1907070833 494 TTPKEPEPTTPKEP-EPTTPKEPEPTT 519
Cdd:PHA03264 332 ADRPEGWPSLEAITfPPPTPATPAVPR 358
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
545-613 |
3.61e-04 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 41.70 E-value: 3.61e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070833 545 KEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEP 613
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
|
|
| PRK13042 |
PRK13042 |
superantigen-like protein SSL4; Reviewed; |
638-721 |
3.61e-04 |
|
superantigen-like protein SSL4; Reviewed;
Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 43.85 E-value: 3.61e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 638 TTPKEPEPTTPKEPEPTTPKEPEPTT-PKEPEPttpkKPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKepEPTTRKEP 715
Cdd:PRK13042 23 TTTQAANATTPSSTKVEAPQSTPPSTkVEAPQS----KPNATTPPSTKVEAPQQtPNATTPSSTKVETPQ--SPTTKQVP 96
|
....*.
gi 1907070833 716 EPTTPK 721
Cdd:PRK13042 97 TEINPK 102
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
523-640 |
3.76e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 44.71 E-value: 3.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 523 PEPTTPKEPEPTTP-KEPEPTTlkePEPTTPKEPEPT-TPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTT 600
Cdd:PRK14951 376 AEKKTPARPEAAAPaAAPVAQA---AAAPAPAAAPAAaASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPP 452
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1907070833 601 KEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 640
Cdd:PRK14951 453 AQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
|
|
| Pneumo_att_G |
pfam05539 |
Pneumovirinae attachment membrane glycoprotein G; |
452-620 |
3.93e-04 |
|
Pneumovirinae attachment membrane glycoprotein G;
Pssm-ID: 114270 [Multi-domain] Cd Length: 408 Bit Score: 44.27 E-value: 3.93e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 452 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT---PKEPEPTTP 528
Cdd:pfam05539 167 EPKTAVTTSKTTSWPTEVSHPTYPSQVTPQSQPATQGHQTATANQRLSSTEPVGTQGTTTSSNPEPQTeppPSQRGPSGS 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 529 KEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKE------PEPTTLKEPEPTTPKEPEPTTTKE 602
Cdd:pfam05539 247 PQHPPSTTSQDQSTTGDGQEHTQRRKTPPATSNRRSPHSTATPPPTTKRQetgrptPRPTATTQSGSSPPHSSPPGVQAN 326
|
170
....*....|....*...
gi 1907070833 603 PESTTRKEPEPTTPKEPE 620
Cdd:pfam05539 327 PTTQNLVDCKELDPPKPN 344
|
|
| Pneumo_att_G |
pfam05539 |
Pneumovirinae attachment membrane glycoprotein G; |
468-652 |
3.96e-04 |
|
Pneumovirinae attachment membrane glycoprotein G;
Pssm-ID: 114270 [Multi-domain] Cd Length: 408 Bit Score: 44.27 E-value: 3.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 468 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT---PKEPEPTTL 544
Cdd:pfam05539 167 EPKTAVTTSKTTSWPTEVSHPTYPSQVTPQSQPATQGHQTATANQRLSSTEPVGTQGTTTSSNPEPQTeppPSQRGPSGS 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 545 KEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKepeptttkepESTTRKEPEPTTPKEPEPTTP 624
Cdd:pfam05539 247 PQHPPSTTSQDQSTTGDGQEHTQRRKTPPATSNRRSPHSTATPPPTTKR----------QETGRPTPRPTATTQSGSSPP 316
|
170 180
....*....|....*....|....*...
gi 1907070833 625 KEPEPTTPKEPEPTTPKEPEPTTPKEPE 652
Cdd:pfam05539 317 HSSPPGVQANPTTQNLVDCKELDPPKPN 344
|
|
| PHA03264 |
PHA03264 |
envelope glycoprotein D; Provisional |
614-723 |
4.10e-04 |
|
envelope glycoprotein D; Provisional
Pssm-ID: 223029 [Multi-domain] Cd Length: 416 Bit Score: 44.23 E-value: 4.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 614 TTPKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEP 693
Cdd:PHA03264 253 VVPPYFEESKGYEPPPA-PSGGSPAPPGDDRPEAKPEPGPVEDGAPGRETGGEGEGPEPAGRDGAAGGEPKPGPPRPAPD 331
|
90 100 110
....*....|....*....|....*....|
gi 1907070833 694 TTPKEPEPTTPKEPEPTtrkePEPTTPKEP 723
Cdd:PHA03264 332 ADRPEGWPSLEAITFPP----PTPATPAVP 357
|
|
| PRK10819 |
PRK10819 |
transport protein TonB; Provisional |
565-716 |
4.17e-04 |
|
transport protein TonB; Provisional
Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 43.52 E-value: 4.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 565 PTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESttrkEPEPTTpkEPEPTTPKePEPTTPKEPEPTTPKEPE 644
Cdd:PRK10819 36 HQVIELPAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEP----EPEPIP--EPPKEAPV-VIPKPEPKPKPKPKPKPK 108
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907070833 645 PTTPKEPEPTTPKEPepttpkePEPTTPKKPEPTTPKEPEPTTPkepePTTPKEPEPTTPKEPEPTTRKEPE 716
Cdd:PRK10819 109 PVKKVEEQPKREVKP-------VEPRPASPFENTAPARPTSSTA----TAAASKPVTSVSSGPRALSRNQPQ 169
|
|
| PRK10819 |
PRK10819 |
transport protein TonB; Provisional |
491-606 |
4.21e-04 |
|
transport protein TonB; Provisional
Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 43.52 E-value: 4.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 491 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTtPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKE 570
Cdd:PRK10819 42 PAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEPEPEPIPEPP-KEAPVVIPKPEPKPKPKPKPKPKPVKKVEEQPKRE 120
|
90 100 110
....*....|....*....|....*....|....*.
gi 1907070833 571 PEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPEST 606
Cdd:PRK10819 121 VKPVEPRPASPFENTAPARPTSSTATAAASKPVTSV 156
|
|
| dnaA |
PRK14086 |
chromosomal replication initiator protein DnaA; |
546-734 |
4.31e-04 |
|
chromosomal replication initiator protein DnaA;
Pssm-ID: 237605 [Multi-domain] Cd Length: 617 Bit Score: 44.43 E-value: 4.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 546 EPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKE-PESTTRKEPEPtTPKEPEPTTP 624
Cdd:PRK14086 89 DPSAGEPAPPPPHARRTSEPELPRPGRRPYEGYGGPRADDRPPGLPRQDQLPTARPAyPAYQQRPEPGA-WPRAADDYGW 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 625 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpkKPEPTTPKEPEPTTPkEPEPTTPKEPE---- 700
Cdd:PRK14086 168 QQQRLGFPPRAPYASPASYAPEQERDREPYDAGRPEYDQRRRDYDHP--RPDWDRPRRDRTDRP-EPPPGAGHVHRggpg 244
|
170 180 190
....*....|....*....|....*....|....*
gi 1907070833 701 -PTTPKEPEPTTRKEPEPTTPKEPEPtTPKEPEPT 734
Cdd:PRK14086 245 pPERDDAPVVPIRPSAPGPLAAQPAP-APGPGEPT 278
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
467-565 |
4.32e-04 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 43.07 E-value: 4.32e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 467 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLK 545
Cdd:PRK11633 45 PKPGDRDEPDMMPAaTQALPTQPPEGAAEAVRAGDAAAP-SLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQ 123
|
90 100
....*....|....*....|
gi 1907070833 546 EPEPTTPKEPEPTTPKEPEP 565
Cdd:PRK11633 124 KVEAPPAPKPEPKPVVEEKA 143
|
|
| PRK10819 |
PRK10819 |
transport protein TonB; Provisional |
507-629 |
4.40e-04 |
|
transport protein TonB; Provisional
Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 43.52 E-value: 4.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 507 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPttlkEPEPTT---PKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTT 583
Cdd:PRK10819 42 PAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEP----EPEPIPeppKEAPVVIPKPEPKPKPKPKPKPKPVKKVEEQP 117
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1907070833 584 LKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKePEPTTPKEPEP 629
Cdd:PRK10819 118 KREVKPVEPRPASPFENTAPARPTSSTATAAASK-PVTSVSSGPRA 162
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
435-536 |
4.44e-04 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 43.07 E-value: 4.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 435 PEPTTPKEPEPT-TLKEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 513
Cdd:PRK11633 45 PKPGDRDEPDMMpAATQALPTQPPEGAAEAVRAGDAAAP-SLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQ 123
|
90 100
....*....|....*....|...
gi 1907070833 514 EPEPttPKEPEPTTPKEPEPTTP 536
Cdd:PRK11633 124 KVEA--PPAPKPEPKPVVEEKAA 144
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
423-565 |
4.49e-04 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 44.69 E-value: 4.49e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 423 TPKEP--EPTTPKEPEPTTPKEPEPTTLKEPEPTTPkepePTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 500
Cdd:PRK10263 739 GPHEPlfTPIVEPVQQPQQPVAPQQQYQQPQQPVAP----QPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQ 814
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907070833 501 PTTPKEPEPTTPkEPEPTTPKEPEPTTPKEP--EPTTPKEPEPTTLKEPEPTTPKEPEPTT-PKEPEP 565
Cdd:PRK10263 815 PQYQQPQQPVAP-QPQYQQPQQPVAPQPQDTllHPLLMRNGDSRPLHKPTTPLPSLDLLTPpPSEVEP 881
|
|
| DUF4045 |
pfam13254 |
Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. ... |
409-557 |
4.49e-04 |
|
Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. This domain family is found in bacteria and eukaryotes, and is typically between 384 and 430 amino acids in length.
Pssm-ID: 433066 [Multi-domain] Cd Length: 415 Bit Score: 44.00 E-value: 4.49e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 409 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP-------TTLKEPEPTTPKEPEPTTPKEPEP---TTPKEPEPT 478
Cdd:pfam13254 201 KEVTPVGLMRSPAPGGHSKSPSVSGISADSSPTKEEPseeadtlSTDKEQSPAPTSASEPPPKTKELPkdsEEPAAPSKS 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 479 TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPEPTTLK--EPEPTTPKEPE 556
Cdd:pfam13254 281 AEASTEKKEPDTESSPETSSEKSAPSLLSPVSKASIDKPLSSPDRDPLSPK-PKPQSPPKDFRANLRsrEVPKDKSKKDE 359
|
.
gi 1907070833 557 P 557
Cdd:pfam13254 360 P 360
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
627-729 |
4.52e-04 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 43.07 E-value: 4.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 627 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 705
Cdd:PRK11633 45 PKPGDRDEPDMMPAaTQALPTQPPEGAAEAVRAGDAAAP-SLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQ 123
|
90 100
....*....|....*....|....
gi 1907070833 706 EPEPTTRKEPEPtTPKEPEPTTPK 729
Cdd:PRK11633 124 KVEAPPAPKPEP-KPVVEEKAAPT 146
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
635-736 |
4.74e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 44.32 E-value: 4.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 635 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPkePEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP--KEPEPTT 711
Cdd:PRK14951 376 AEKKTPARPEAAAPaAAPVAQAAAAPAPAAA--PAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAvaLAPAPPA 453
|
90 100
....*....|....*....|....*...
gi 1907070833 712 RKEPEPTTPK---EPEPTTPKEPEPTTP 736
Cdd:PRK14951 454 QAAPETVAIPvrvAPEPAVASAAPAPAA 481
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
410-522 |
4.82e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 44.47 E-value: 4.82e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 410 EPEPTTPKEPEPTTP--KEPEPTTPKEPEPTTPKEPEPTTlKEPEPTTPKEPEPTTPKEPepttPKEPEPTTPKEPEPTT 487
Cdd:PRK07994 414 PLPETTSQLLAARQQlqRAQGATKAKKSEPAAASRARPVN-SALERLASVRPAPSALEKA----PAKKEAYRWKATNPVE 488
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907070833 488 PKEPEPTTPKEPEP--TTPKEPEPTTPKEPEPTTPKE 522
Cdd:PRK07994 489 VKKEPVATPKALKKalEHEKTPELAAKLAAEAIERDP 525
|
|
| PspC_subgroup_1 |
NF033838 |
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
601-737 |
4.85e-04 |
|
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 44.23 E-value: 4.85e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 601 KEPESTTRKEpEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEpEPTTPKKPEPTTp 680
Cdd:NF033838 351 KEAELELVKE-EAKEPRNEEKI-KQAKAKVESKKAEATRLEKIKTDRKKAEEEAKRKAAEEDKVKE-KPAEQPQPAPAP- 426
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070833 681 kEPEPTTPKEPEPT-TPKEPEPTTPKEPEPTTRK---EPEPTTPKEPePTTPKEPEPTTPK 737
Cdd:NF033838 427 -QPEKPAPKPEKPAeQPKAEKPADQQAEEDYARRseeEYNRLTQQQP-PKTEKPAQPSTPK 485
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
604-779 |
5.11e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 44.10 E-value: 5.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 604 ESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEP 683
Cdd:PRK12323 371 GAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAP 450
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 684 EPTTPKEPEPTTP---KEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKV 760
Cdd:PRK12323 451 APAPAAAPAAAARpaaAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPA 530
|
170
....*....|....*....
gi 1907070833 761 TAPAEEIQNKPEETTPASE 779
Cdd:PRK12323 531 TADPDDAFETLAPAPAAAP 549
|
|
| PRK10819 |
PRK10819 |
transport protein TonB; Provisional |
434-576 |
5.17e-04 |
|
transport protein TonB; Provisional
Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 43.13 E-value: 5.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 434 EPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPkEPEPTtpKEPEpttpKEPEPttpkEPEPTTPKE-PEPTTPKEPEPTTP 512
Cdd:PRK10819 36 HQVIELPAPAQPISVTMVAPADLEPPQAVQP-PPEPV--VEPE----PEPEP----IPEPPKEAPvVIPKPEPKPKPKPK 104
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070833 513 KEPEPTTPKEPEP---TTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTP 576
Cdd:PRK10819 105 PKPKPVKKVEEQPkreVKPVEPRPASPFENTAPARPTSSTATAAASKPVTSVSSGPRALSRNQPQYP 171
|
|
| PRK13108 |
PRK13108 |
prolipoprotein diacylglyceryl transferase; Reviewed |
592-733 |
5.28e-04 |
|
prolipoprotein diacylglyceryl transferase; Reviewed
Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 43.81 E-value: 5.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 592 PKEPEPTT-TKEPESTTRKEPEPTTPKEP-EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPEP 669
Cdd:PRK13108 295 ALEREPAElAAAAVASAASAVGPVGPGEPnQPDDVAEAVKAEVAEVTDEVAAESVVQVADRDGESTPA-VEETSEADIER 373
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070833 670 TTPKKPEPTTPKEPEPTTPKEPE-PTTPKEPEPTTPKEPEPTTRKEPEPTT-PKEPEPTTPKEPEP 733
Cdd:PRK13108 374 EQPGDLAGQAPAAHQVDAEAASAaPEEPAALASEAHDETEPEVPEKAAPIPdPAKPDELAVAGPGD 439
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
491-586 |
5.44e-04 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 44.07 E-value: 5.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 491 PEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTT--PKEPEPTTPKEPEPTTL 568
Cdd:COG3266 265 SAPATTSLGEQQEV-SLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPTAakPVVTETAAPAAPAPEAA 343
|
90
....*....|....*....
gi 1907070833 569 K-EPEPTTPKEPEPTTLKE 586
Cdd:COG3266 344 AaAAAPAAPAVAKKLAADE 362
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
507-610 |
5.68e-04 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 43.69 E-value: 5.68e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 507 PEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKepepttPKEPEPTTLKE 586
Cdd:COG3266 265 SAPATTSLGEQQEV-SLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPTAAK------PVVTETAAPAA 337
|
90 100
....*....|....*....|....*
gi 1907070833 587 PEP-TTPKEPEPTTTKEPESTTRKE 610
Cdd:COG3266 338 PAPeAAAAAAAPAAPAVAKKLAADE 362
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
573-785 |
5.71e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 44.39 E-value: 5.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 573 PTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 652
Cdd:PHA03307 25 PATPGDAADDLLSGSQGQLVSDSAELAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREG 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 653 pttpkEPEPTTPkEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPE 732
Cdd:PHA03307 105 -----SPTPPGP-SSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSS 178
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 1907070833 733 PTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTPASEDSDDSK 785
Cdd:PHA03307 179 PEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADD 231
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
674-738 |
5.72e-04 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 44.11 E-value: 5.72e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1907070833 674 KPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKK 738
Cdd:PRK12270 37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPA 101
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
566-626 |
5.78e-04 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 43.73 E-value: 5.78e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070833 566 TTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKE 626
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| PRK13108 |
PRK13108 |
prolipoprotein diacylglyceryl transferase; Reviewed |
413-540 |
5.80e-04 |
|
prolipoprotein diacylglyceryl transferase; Reviewed
Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 43.81 E-value: 5.80e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 413 PTTPKEPEPTTpkEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTP----KEPEPTTPKEPE-PTTPKEPEPTT 487
Cdd:PRK13108 320 PGEPNQPDDVA--EAVKAEVAEVTDEVAAESVVQVADRDGESTPAVEETSEAdierEQPGDLAGQAPAaHQVDAEAASAA 397
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 1907070833 488 PKEPEPTTPKEPEPTTPKEPEPTTPKepepTTPKEPEPTTPKEPEPtTPKEPE 540
Cdd:PRK13108 398 PEEPAALASEAHDETEPEVPEKAAPI----PDPAKPDELAVAGPGD-DPAEPD 445
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
515-636 |
5.81e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 43.93 E-value: 5.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 515 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTlkePEPT-TPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTP 592
Cdd:PRK14951 376 AEKKTPARPEAAAPaAAPVAQAAAAPAPAA---APAAaASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPP 452
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 1907070833 593 KEPEPTTTKEPestTRKEPEPTTPKEPEPTTPKEPEPTTPKEPE 636
Cdd:PRK14951 453 AQAAPETVAIP---VRVAPEPAVASAAPAPAAAPAAARLTPTEE 493
|
|
| PspC_subgroup_1 |
NF033838 |
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
441-721 |
5.95e-04 |
|
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 44.23 E-value: 5.95e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 441 KEPEPTTLKEPEptTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE-------PEPTTPKEPEpTTPKEPEPTTPK 513
Cdd:NF033838 216 KKAEATRLEKIK--TDREKAEEEAKRRADAKLKEAVEKNVATSEQDKPKRrakrgvlGEPATPDKKE-NDAKSSDSSVGE 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 514 EPEPTTPKEPEPttpKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPE------PTTLKEPEPTTPKEPEPTTLKEP 587
Cdd:NF033838 293 ETLPSPSLKPEK---KVAEAEKKVEEAKKKAKDQKEEDRRNYPTNTYKTLEleiaesDVKVKEAELELVKEEAKEPRNEE 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 588 EPTTPKEPEptTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPeptTPKEPEPTTPKEPEPTTPKepePTTPKEp 667
Cdd:NF033838 370 KIKQAKAKV--ESKKAEATRLEKIKTDRKKAEEEAKRKAAEEDKVKEK---PAEQPQPAPAPQPEKPAPK---PEKPAE- 440
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 1907070833 668 eptTPKKPEPTTPKEPEPTTPKEPEpttpkEPEPTTPKEPePTTRKEPEPTTPK 721
Cdd:NF033838 441 ---QPKAEKPADQQAEEDYARRSEE-----EYNRLTQQQP-PKTEKPAQPSTPK 485
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
499-599 |
6.57e-04 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 42.68 E-value: 6.57e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 499 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPK 577
Cdd:PRK11633 45 PKPGDRDEPDMMPAaTQALPTQPPEGAAEAVRAGDAAAP-SLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQ 123
|
90 100
....*....|....*....|..
gi 1907070833 578 EPEPTTlkEPEPTTPKEPEPTT 599
Cdd:PRK11633 124 KVEAPP--APKPEPKPVVEEKA 143
|
|
| PHA03169 |
PHA03169 |
hypothetical protein; Provisional |
425-633 |
6.77e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 43.42 E-value: 6.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 425 KEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPttpKEPEPTTP 504
Cdd:PHA03169 44 AKPAPPAPTTSGPQVRAVAEQGHRQTESDTETAEESRHGEKEERGQGGPSGSGSESVGSPTPSPSGSAE---ELASGLSP 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 505 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTL 584
Cdd:PHA03169 121 ENTSGSSPESPASHSPPPSPPSHPGPHEPAPPESHNPSPNQQPSSFLQPSHEDSPEEPEPPTSEPEPDSPGPPQSETPTS 200
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1907070833 585 KEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPK 633
Cdd:PHA03169 201 SPPPQSPPDEPGEPQSPTPQQAPSPNTQQAVEHEDEPTEPEREGPPFPG 249
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
499-619 |
7.01e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 43.93 E-value: 7.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 499 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPkePEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPK 577
Cdd:PRK14951 376 AEKKTPARPEAAAPaAAPVAQAAAAPAPAAA--PAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPA 453
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 1907070833 578 EPEPTTLKEPEPTTPkEPePTTTKEPESTTRKEPEPTTPKEP 619
Cdd:PRK14951 454 QAAPETVAIPVRVAP-EP-AVASAAPAPAAAPAAARLTPTEE 493
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
638-736 |
7.11e-04 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 43.69 E-value: 7.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 638 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPttpkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEP 717
Cdd:COG3266 265 SAPATTSLGEQQEVSLPPAVAAQPAAAAAAQPSAVALPAA----PAAAAAAAAPAEAAAPQPTAAKPVVTETAAPAAPAP 340
|
90 100
....*....|....*....|
gi 1907070833 718 -TTPKEPEPTTPKEPEPTTP 736
Cdd:COG3266 341 eAAAAAAAPAAPAVAKKLAA 360
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
539-656 |
7.19e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 43.55 E-value: 7.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 539 PEPTTLKEPEPTTP-KEPEPTTPKEPEPTTlkePEPT-TPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTP 616
Cdd:PRK14951 376 AEKKTPARPEAAAPaAAPVAQAAAAPAPAA---APAAaASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPP 452
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1907070833 617 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 656
Cdd:PRK14951 453 AQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
|
|
| PRK12757 |
PRK12757 |
cell division protein FtsN; Provisional |
580-660 |
7.42e-04 |
|
cell division protein FtsN; Provisional
Pssm-ID: 237191 [Multi-domain] Cd Length: 256 Bit Score: 42.72 E-value: 7.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 580 EPTTLKE-PE-PTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 657
Cdd:PRK12757 98 QPTQLSEvPYnEQTPQVPRSTVQIQQQAQQQQPPATTAQPQPVTPPRQTTAPVQPQTPAPVRTQPAAPVTQAVEAPKVEA 177
|
...
gi 1907070833 658 EPE 660
Cdd:PRK12757 178 EKE 180
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
470-570 |
7.42e-04 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 43.69 E-value: 7.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 470 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPttpkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEP 549
Cdd:COG3266 265 SAPATTSLGEQQEVSLPPAVAAQPAAAAAAQPSAVALPAA----PAAAAAAAAPAEAAAPQPTAAKPVVTETAAPAAPAP 340
|
90 100
....*....|....*....|..
gi 1907070833 550 -TTPKEPEPTTPKEPEPTTLKE 570
Cdd:COG3266 341 eAAAAAAAPAAPAVAKKLAADE 362
|
|
| PRK14949 |
PRK14949 |
DNA polymerase III subunits gamma and tau; Provisional |
504-659 |
7.58e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237863 [Multi-domain] Cd Length: 944 Bit Score: 43.95 E-value: 7.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 504 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPE--PTTPKEPEPTTLKEPEPTTPKEPEP 581
Cdd:PRK14949 637 KKSSADRKPKTPPSRAPPASLSKPASSPDASQTSASFDLDPDFELATHQSVPEaaLASGSAPAPPPVPDPYDRPPWEEAP 716
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907070833 582 TTlkEPEPTTPKEPEPTTTKEPESTTRKEPEPTTpkEPEPTtpkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 659
Cdd:PRK14949 717 EV--ASANDGPNNAAEGNLSESVEDASNSELQAV--EQQAT----HQPQVQAEAQSPASTTALTQTSSEVQDTELNLV 786
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
598-658 |
8.04e-04 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 43.35 E-value: 8.04e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070833 598 TTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 658
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| PRK10905 |
PRK10905 |
cell division protein DamX; Validated |
622-737 |
8.98e-04 |
|
cell division protein DamX; Validated
Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 43.00 E-value: 8.98e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 622 TTPKEPEPTTPKEPEPTTPKEPEPTTP------KEPEPTTPKEPEPTTPKEPEPTT---PKKPEPTTPKEPEPT--TPKE 690
Cdd:PRK10905 106 TQPQNQQQLNNVAVNSTLPTEPATVAPvrngnaSRQTAKTQTAERPATTRPARKQAviePKKPQATAKTEPKPVaqTPKR 185
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 1907070833 691 PEPTTPKEPepttPKEPEPTTRKEPEPTTPKEPEPT-TPKEPEPTTPK 737
Cdd:PRK10905 186 TEPAAPVAS----TKAPAATSTPAPKETATTAPVQTaSPAQTTATPAA 229
|
|
| PRK13042 |
PRK13042 |
superantigen-like protein SSL4; Reviewed; |
605-689 |
9.14e-04 |
|
superantigen-like protein SSL4; Reviewed;
Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 42.70 E-value: 9.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 605 STTRKEPEPTTPKEPEPTTPKEPEPTT-PKEPEPTtpkePEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKkpEPTTPKE 682
Cdd:PRK13042 22 TTTTQAANATTPSSTKVEAPQSTPPSTkVEAPQSK----PNATTPPSTKVEAPQQtPNATTPSSTKVETPQ--SPTTKQV 95
|
....*..
gi 1907070833 683 PEPTTPK 689
Cdd:PRK13042 96 PTEINPK 102
|
|
| Pneumo_att_G |
pfam05539 |
Pneumovirinae attachment membrane glycoprotein G; |
556-732 |
9.39e-04 |
|
Pneumovirinae attachment membrane glycoprotein G;
Pssm-ID: 114270 [Multi-domain] Cd Length: 408 Bit Score: 43.11 E-value: 9.39e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 556 EPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTpkepEPTTPKEP 635
Cdd:pfam05539 167 EPKTAVTTSKTTSWPTEVSHPTYPSQVTPQSQPATQGHQTATANQRLSSTEPVGTQGTTTSSNPEPQT----EPPPSQRG 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 636 EPTTPKEPEPTTpkEPEPTTPKEPEPTTPKEPEPTTPKKP-EPTTPKEPEPTTPKE------PEPTTPKEPEPTTPKEPE 708
Cdd:pfam05539 243 PSGSPQHPPSTT--SQDQSTTGDGQEHTQRRKTPPATSNRrSPHSTATPPPTTKRQetgrptPRPTATTQSGSSPPHSSP 320
|
170 180
....*....|....*....|....
gi 1907070833 709 PTTRKEPEPTTPKEPEPTTPKEPE 732
Cdd:pfam05539 321 PGVQANPTTQNLVDCKELDPPKPN 344
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
507-628 |
9.53e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 43.16 E-value: 9.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 507 PEPTTPKEPEPTTP-KEPEPTTPKepePTTPKEPEPTTLKEP-EPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTtl 584
Cdd:PRK14951 376 AEKKTPARPEAAAPaAAPVAQAAA---APAPAAAPAAAASAPaAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPA-- 450
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 1907070833 585 kEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPE 628
Cdd:PRK14951 451 -PPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEE 493
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
407-474 |
9.65e-04 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 42.96 E-value: 9.65e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907070833 407 TRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKE 474
Cdd:TIGR00601 75 SKPKTGTGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
607-667 |
9.73e-04 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 43.45 E-value: 9.73e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907070833 607 TRKEPEPTTPKEPEPT---TPKEPEPTTPKEPEPTTPKEPePTTPKEPEPTTPKEPEPTTPKEP 667
Cdd:COG5373 38 AEAAEAASAPAEPEPEaaaAATAAAPEAAPAPVPEAPAAP-PAAAEAPAPAAAAPPAEAEPAAA 100
|
|
| PRK14960 |
PRK14960 |
DNA polymerase III subunit gamma/tau; |
509-691 |
9.85e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237868 [Multi-domain] Cd Length: 702 Bit Score: 43.50 E-value: 9.85e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 509 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPttlkEPEPTTPKEPEPTTLKEPE 588
Cdd:PRK14960 360 PLAPNEILVSEPVQQNGQAEVGLNSQAQTAQEITPVSAVQPVEVISQPAMVEPEPEP----EPEPEPEPEPEPEPEPEPE 435
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 589 PTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPKEP 667
Cdd:PRK14960 436 PEPEPEPQPNQDLMVFDPNHHELIGLESAVVQETVSVLEEDFIPVPEQKLVQVQAETQVKQiEPEPASTAEPIGLFEASS 515
|
170 180
....*....|....*....|....
gi 1907070833 668 EPTTPKKPEPTTPKEPEPTTPKEP 691
Cdd:PRK14960 516 AEFSLAQDTSAYDLVSEPVIEQQS 539
|
|
| PRK14960 |
PRK14960 |
DNA polymerase III subunit gamma/tau; |
440-563 |
1.00e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237868 [Multi-domain] Cd Length: 702 Bit Score: 43.50 E-value: 1.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 440 PKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPT------TPKEPEPTTPKEP--EPTTPKEPEPTTPKEPEPTT 511
Cdd:PRK14960 407 PAMVEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPQPNqdlmvfDPNHHELIGLESAvvQETVSVLEEDFIPVPEQKLV 486
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 1907070833 512 PKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEP 563
Cdd:PRK14960 487 QVQAETQVKQiEPEPASTAEPIGLFEASSAEFSLAQDTSAYDLVSEPVIEQQS 539
|
|
| PRK13042 |
PRK13042 |
superantigen-like protein SSL4; Reviewed; |
454-537 |
1.01e-03 |
|
superantigen-like protein SSL4; Reviewed;
Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 42.70 E-value: 1.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 454 TTPKEPEPTTPKEPEPTTPKEPEPTT-PKEPEPTtpkePEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKepEPTTPKEP 531
Cdd:PRK13042 23 TTTQAANATTPSSTKVEAPQSTPPSTkVEAPQSK----PNATTPPSTKVEAPQQtPNATTPSSTKVETPQ--SPTTKQVP 96
|
....*.
gi 1907070833 532 EPTTPK 537
Cdd:PRK13042 97 TEINPK 102
|
|
| FimV |
COG3170 |
Type IV pilus assembly protein FimV [Cell motility, Extracellular structures]; |
444-723 |
1.01e-03 |
|
Type IV pilus assembly protein FimV [Cell motility, Extracellular structures];
Pssm-ID: 442403 [Multi-domain] Cd Length: 508 Bit Score: 43.24 E-value: 1.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 444 EPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkePEPTTPKEP 523
Cdd:COG3170 99 EYTLLLDPPAYAAAAAAPAAAPAPAPAAPAAAAAAADQPAAEAAPAASGEYYPVRPGDTLWSIAARPVR--PSSGVSLDQ 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 524 EPTTPKEPEPTTPKEPEPTTLKEPEPT---TPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTT 600
Cdd:COG3170 177 MMVALYRANPDAFIDGNINRLKAGAVLrvpAAEEVAALSPAEARQEVQAQSADWAAYRARLAAAVEPAPAAAAPAAPPAA 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 601 KEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP--KEPEPTTPKEPEPTTPKEPEP-TTPKEPEPTTPkkpeP 677
Cdd:COG3170 257 AAAAGPVPAAAEDTLSPEVTAAAAAEEADALPEAAAELAErlAALEAQLAELQRLLALKNPAPaAAVSAPAAAAA----A 332
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 1907070833 678 TTPKEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTRKEPEPTTPKEP 723
Cdd:COG3170 333 ATVEAAAPAAAAQPAAAAP-APALDNPLLLAGLLRRRKAEADEVDP 377
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
407-520 |
1.01e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 43.16 E-value: 1.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 407 TRKEPEPTTP---KEPEPTTPKEPEPTTPKEPEPTTPkepePTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 483
Cdd:PRK14951 380 TPARPEAAAPaaaPVAQAAAAPAPAAAPAAAASAPAA----PPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQA 455
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907070833 484 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 520
Cdd:PRK14951 456 APETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
|
|
| PRK13042 |
PRK13042 |
superantigen-like protein SSL4; Reviewed; |
614-697 |
1.03e-03 |
|
superantigen-like protein SSL4; Reviewed;
Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 42.70 E-value: 1.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 614 TTPKEPEPTTPKEPEPTTPKEPEPTT-PKEPEPTtpkePEPTTPKEPEPTTPKE-PEPTTPKKPEPTTPKepEPTTPKEP 691
Cdd:PRK13042 23 TTTQAANATTPSSTKVEAPQSTPPSTkVEAPQSK----PNATTPPSTKVEAPQQtPNATTPSSTKVETPQ--SPTTKQVP 96
|
....*.
gi 1907070833 692 EPTTPK 697
Cdd:PRK13042 97 TEINPK 102
|
|
| PRK13042 |
PRK13042 |
superantigen-like protein SSL4; Reviewed; |
598-681 |
1.04e-03 |
|
superantigen-like protein SSL4; Reviewed;
Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 42.70 E-value: 1.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 598 TTTKEPESTTRKEPEPTTPKEPEPTT-PKEPEPTtpkePEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKepEPTTPKKP 675
Cdd:PRK13042 23 TTTQAANATTPSSTKVEAPQSTPPSTkVEAPQSK----PNATTPPSTKVEAPQQtPNATTPSSTKVETPQ--SPTTKQVP 96
|
....*.
gi 1907070833 676 EPTTPK 681
Cdd:PRK13042 97 TEINPK 102
|
|
| PRK13042 |
PRK13042 |
superantigen-like protein SSL4; Reviewed; |
446-529 |
1.04e-03 |
|
superantigen-like protein SSL4; Reviewed;
Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 42.70 E-value: 1.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 446 TTLKEPEPTTPKEPEPTTPKEPEPTT-PKEPEPTtpkePEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKepEPTTPKEP 523
Cdd:PRK13042 23 TTTQAANATTPSSTKVEAPQSTPPSTkVEAPQSK----PNATTPPSTKVEAPQQtPNATTPSSTKVETPQ--SPTTKQVP 96
|
....*.
gi 1907070833 524 EPTTPK 529
Cdd:PRK13042 97 TEINPK 102
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
531-604 |
1.05e-03 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 43.34 E-value: 1.05e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907070833 531 PEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPE 604
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAA 111
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
646-718 |
1.08e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 42.75 E-value: 1.08e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907070833 646 TTPKEPEPTTPKEPEPTTPK-EPEPTTPKKPEPTTPKEPEPTTPKEPEPTtpkEPEPTTPKEPEPTTRKEPEPT 718
Cdd:PTZ00144 120 TGGAPPAAAPAAAAAAKAEKtTPEKPKAAAPTPEPPAASKPTPPAAAKPP---EPAPAAKPPPTPVARADPRET 190
|
|
| PHA03369 |
PHA03369 |
capsid maturational protease; Provisional |
543-658 |
1.08e-03 |
|
capsid maturational protease; Provisional
Pssm-ID: 223061 [Multi-domain] Cd Length: 663 Bit Score: 43.06 E-value: 1.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 543 TLKEPEPTTPKEPEPTTPKEPEPTTlkepePTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEP-EP 621
Cdd:PHA03369 350 TASLTAPSRVLAAAAKVAVIAAPQT-----HTGPADRQRPQRPDGIPYSVPARSPMTAYPPVPQFCGDPGLVSPYNPqSP 424
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907070833 622 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 658
Cdd:PHA03369 425 GTSYGPEPVGPVPPQPTNPYVMPISMANMVYPGHPQE 461
|
|
| PTZ00108 |
PTZ00108 |
DNA topoisomerase 2-like protein; Provisional |
534-738 |
1.11e-03 |
|
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 43.50 E-value: 1.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 534 TTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPepTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEP 613
Cdd:PTZ00108 1154 KEQRLKSKTKGKASKLRKPKLKKKEKKKKKSSADKSKK--ASVVGNSKRVDSDEKRKLDDKPDNKKSNSSGSDQEDDEEQ 1231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 614 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP--TTPKKPEPTTPKEPEPTTPKEP 691
Cdd:PTZ00108 1232 KTKPKKSSVKRLKSKKNNSSKSSEDNDEFSSDDLSKEGKPKNAPKRVSAVQYSPPPpsKRPDGESNGGSKPSSPTKKKVK 1311
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1907070833 692 EPTTPKEPEPTTPKEPEPTT-RKEPEPTTPKEPEPTTPKEPEPTTPKK 738
Cdd:PTZ00108 1312 KRLEGSLAALKKKKKSEKKTaRKKKSKTRVKQASASQSSRLLRRPRKK 1359
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
405-631 |
1.11e-03 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 43.02 E-value: 1.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 405 STTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 484
Cdd:pfam17823 200 SSAPATLTPARGISTAATATGHPAAGTALAAVGNSSPAAGTVTAAVGTVTPAALATLAAAAGTVASAAGTINMGDPHARR 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 485 PTTPKE-PEPTTPKEPEPTTPKEPEPTTPK----EPEPTTPKEPEPT-TPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPT 558
Cdd:pfam17823 280 LSPAKHmPSDTMARNPAAPMGAQAQGPIIQvstdQPVHNTAGEPTPSpSNTTLEPNTPKSVASTNLAVVTTTKAQAKEPS 359
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907070833 559 TPKEPEPTTLKEPE-----PTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTT 631
Cdd:pfam17823 360 ASPVPVLHTSMIPEveatsPTTQPSPLLPTQGAAGPGILLAPEQVATEATAGTASAGPTPRSSGDPKTLAMASCQLST 437
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
599-666 |
1.15e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 42.57 E-value: 1.15e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907070833 599 TTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 666
Cdd:TIGR00601 75 SKPKTGTGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| SAV_2336_NTERM |
NF041121 |
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ... |
467-547 |
1.18e-03 |
|
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.
Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 42.68 E-value: 1.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 467 PEPTTPKEPEPTTPKEPEPTTP---KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 543
Cdd:NF041121 19 AAPPSPEGPAPTAASQPATPPPpaaPPSPPGDPPEPPAPEPAPLPAPYPGSLAPPPPPPPGPAGAAPGAALPVRVPAPPA 98
|
....
gi 1907070833 544 LKEP 547
Cdd:NF041121 99 LPNP 102
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
671-736 |
1.19e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 42.57 E-value: 1.19e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070833 671 TPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTP 736
Cdd:TIGR00601 75 SKPKTGTGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVP 140
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
539-618 |
1.20e-03 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 43.34 E-value: 1.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 539 PEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKE 618
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
|
| PTZ00108 |
PTZ00108 |
DNA topoisomerase 2-like protein; Provisional |
466-693 |
1.24e-03 |
|
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 43.11 E-value: 1.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 466 EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLK 545
Cdd:PTZ00108 1149 EKEIAKEQRLKSKTKGKASKLRKPKLKKKEKKKKKSSADKSKKASV-VGNSKRVDSDEKRKLDDKPDNKKSNSSGSDQED 1227
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 546 EPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPE--STTRKEPEPTTPKEPEPTT 623
Cdd:PTZ00108 1228 DEEQKTKPKKSSVKRLKSKKNNSSKSSEDNDEFSSDDLSKEGKPKNAPKRVSAVQYSPPppSKRPDGESNGGSKPSSPTK 1307
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070833 624 PKEPEPTTPKEPEPTTPKEPEPTT-PKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEP 693
Cdd:PTZ00108 1308 KKVKKRLEGSLAALKKKKKSEKKTaRKKKSKTRVKQASASQSSRLLRRPRKKKSDSSSEDDDDSEVDDSED 1378
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
607-672 |
1.25e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 42.57 E-value: 1.25e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070833 607 TRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 672
Cdd:TIGR00601 75 SKPKTGTGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVP 140
|
|
| PRK14960 |
PRK14960 |
DNA polymerase III subunit gamma/tau; |
576-715 |
1.44e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237868 [Multi-domain] Cd Length: 702 Bit Score: 42.73 E-value: 1.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 576 PKEPEPTTLKEP-EPTTPKEP--EPTTTKEPESTTRKEPEPTT----PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 648
Cdd:PRK14960 360 PLAPNEILVSEPvQQNGQAEVglNSQAQTAQEITPVSAVQPVEvisqPAMVEPEPEPEPEPEPEPEPEPEPEPEPEPEPE 439
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907070833 649 KEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK-EPEPTTRKEP 715
Cdd:PRK14960 440 PEPQPNQDLMVFDPNHHELIGLESAVVQETVSVLEEDFIPVPEQKLVQVQAETQVKQiEPEPASTAEP 507
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
643-715 |
1.62e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 42.36 E-value: 1.62e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907070833 643 PEPTTPKEPEPTTPKePEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEP 715
Cdd:PTZ00144 122 GAPPAAAPAAAAAAK-AEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRETRVP 193
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
494-594 |
1.66e-03 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 42.53 E-value: 1.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 494 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPttpkEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEP 573
Cdd:COG3266 265 SAPATTSLGEQQEVSLPPAVAAQPAAAAAAQPSAVALPAA----PAAAAAAAAPAEAAAPQPTAAKPVVTETAAPAAPAP 340
|
90 100
....*....|....*....|..
gi 1907070833 574 -TTPKEPEPTTLKEPEPTTPKE 594
Cdd:COG3266 341 eAAAAAAAPAAPAVAKKLAADE 362
|
|
| PTZ00108 |
PTZ00108 |
DNA topoisomerase 2-like protein; Provisional |
546-785 |
1.67e-03 |
|
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 42.73 E-value: 1.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 546 EPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPK 625
Cdd:PTZ00108 1149 EKEIAKEQRLKSKTKGKASKLRKPKLKKKEKKKKKSSADKSKKASVVGNSKRVDSDEKRKLDDKPDNKKSNSSGSDQEDD 1228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 626 EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEpepTTPKEPEPTTPKKPEPTTPKEPEPTTPKepepTTPKEPEPTTPK 705
Cdd:PTZ00108 1229 EEQKTKPKKSSVKRLKSKKNNSSKSSEDNDEFS---SDDLSKEGKPKNAPKRVSAVQYSPPPPS----KRPDGESNGGSK 1301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 706 EPEPTTRKEPEPTTPKEPEPTTPKEPEPTTP--KKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQN-KPEET--TPASED 780
Cdd:PTZ00108 1302 PSSPTKKKVKKRLEGSLAALKKKKKSEKKTArkKKSKTRVKQASASQSSRLLRRPRKKKSDSSSEDdDDSEVddSEDEDD 1381
|
....*
gi 1907070833 781 SDDSK 785
Cdd:PTZ00108 1382 EDDED 1386
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
481-539 |
1.85e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 42.68 E-value: 1.85e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907070833 481 KEPEPTTPKEPEPT---TPKEPEPTTPKEPEPTTPKEPePTTPKEPEPTTPKEPEPTTPKEP 539
Cdd:COG5373 40 AAEAASAPAEPEPEaaaAATAAAPEAAPAPVPEAPAAP-PAAAEAPAPAAAAPPAEAEPAAA 100
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
473-531 |
1.85e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 42.68 E-value: 1.85e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907070833 473 KEPEPTTPKEPEPT---TPKEPEPTTPKEPEPTTPKEPePTTPKEPEPTTPKEPEPTTPKEP 531
Cdd:COG5373 40 AAEAASAPAEPEPEaaaAATAAAPEAAPAPVPEAPAAP-PAAAEAPAPAAAAPPAEAEPAAA 100
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
465-523 |
1.85e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 42.68 E-value: 1.85e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907070833 465 KEPEPTTPKEPEPT---TPKEPEPTTPKEPEPTTPKEPePTTPKEPEPTTPKEPEPTTPKEP 523
Cdd:COG5373 40 AAEAASAPAEPEPEaaaAATAAAPEAAPAPVPEAPAAP-PAAAEAPAPAAAAPPAEAEPAAA 100
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
449-507 |
1.85e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 42.68 E-value: 1.85e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907070833 449 KEPEPTTPKEPEPT---TPKEPEPTTPKEPEPTTPKEPePTTPKEPEPTTPKEPEPTTPKEP 507
Cdd:COG5373 40 AAEAASAPAEPEPEaaaAATAAAPEAAPAPVPEAPAAP-PAAAEAPAPAAAAPPAEAEPAAA 100
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
457-515 |
1.85e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 42.68 E-value: 1.85e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907070833 457 KEPEPTTPKEPEPT---TPKEPEPTTPKEPEPTTPKEPePTTPKEPEPTTPKEPEPTTPKEP 515
Cdd:COG5373 40 AAEAASAPAEPEPEaaaAATAAAPEAAPAPVPEAPAAP-PAAAEAPAPAAAAPPAEAEPAAA 100
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
563-646 |
1.89e-03 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 42.57 E-value: 1.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 563 PEPTTLKEPEPTTPKEPEPTTlkEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPtTPKE 642
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAP--AAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAA-AAVE 114
|
....
gi 1907070833 643 PEPT 646
Cdd:PRK12270 115 DEVT 118
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
425-491 |
1.92e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 42.29 E-value: 1.92e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070833 425 KEPEPTTPKEPEPTTPKEPEpttlkEPEPTTPKEPEPTTPKEPePTTPKEPEPTTPKEPEPTTPKEP 491
Cdd:COG5373 40 AAEAASAPAEPEPEAAAAAT-----AAAPEAAPAPVPEAPAAP-PAAAEAPAPAAAAPPAEAEPAAA 100
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
617-675 |
1.92e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 42.29 E-value: 1.92e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907070833 617 KEPEPTTPKEPEPT---TPKEPEPTTPKEPEPTTPKEPePTTPKEPEPTTPKEPEPTTPKKP 675
Cdd:COG5373 40 AAEAASAPAEPEPEaaaAATAAAPEAAPAPVPEAPAAP-PAAAEAPAPAAAAPPAEAEPAAA 100
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
590-650 |
2.00e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 41.80 E-value: 2.00e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070833 590 TTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 650
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
446-506 |
2.03e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 41.80 E-value: 2.03e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070833 446 TTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 506
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
625-683 |
2.09e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 42.29 E-value: 2.09e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907070833 625 KEPEPTTPKEPEPT---TPKEPEPTTPKEPEPTTPKEPePTTPKEPEPTTPKKPEPTTPKEP 683
Cdd:COG5373 40 AAEAASAPAEPEPEaaaAATAAAPEAAPAPVPEAPAAP-PAAAEAPAPAAAAPPAEAEPAAA 100
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
622-682 |
2.10e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 41.80 E-value: 2.10e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070833 622 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKE 682
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
478-538 |
2.12e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 41.80 E-value: 2.12e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070833 478 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 538
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
470-530 |
2.12e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 41.80 E-value: 2.12e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070833 470 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 530
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
462-522 |
2.12e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 41.80 E-value: 2.12e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070833 462 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 522
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
454-514 |
2.12e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 41.80 E-value: 2.12e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070833 454 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 514
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| PHA03264 |
PHA03264 |
envelope glycoprotein D; Provisional |
486-595 |
2.15e-03 |
|
envelope glycoprotein D; Provisional
Pssm-ID: 223029 [Multi-domain] Cd Length: 416 Bit Score: 41.91 E-value: 2.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 486 TTPKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEP 565
Cdd:PHA03264 253 VVPPYFEESKGYEPPPA-PSGGSPAPPGDDRPEAKPEPGPVEDGAPGRETGGEGEGPEPAGRDGAAGGEPKPGPPRPAPD 331
|
90 100 110
....*....|....*....|....*....|
gi 1907070833 566 TTLKEPEPTTPKEPEPTtlkePEPTTPKEP 595
Cdd:PHA03264 332 ADRPEGWPSLEAITFPP----PTPATPAVP 357
|
|
| SAV_2336_NTERM |
NF041121 |
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ... |
491-571 |
2.18e-03 |
|
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.
Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 41.91 E-value: 2.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 491 PEPTTPKEPEPTTPKEPEPTTP---KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTT 567
Cdd:NF041121 19 AAPPSPEGPAPTAASQPATPPPpaaPPSPPGDPPEPPAPEPAPLPAPYPGSLAPPPPPPPGPAGAAPGAALPVRVPAPPA 98
|
....
gi 1907070833 568 LKEP 571
Cdd:NF041121 99 LPNP 102
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
410-508 |
2.20e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 42.01 E-value: 2.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 410 EPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 488
Cdd:PRK14951 394 VAQAAAAPAPAAAPAAAaSAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQAAPETVAIPVRVAPEPAVA 473
|
90 100
....*....|....*....|
gi 1907070833 489 KEPEPTTPKEPEPTTPKEPE 508
Cdd:PRK14951 474 SAAPAPAAAPAAARLTPTEE 493
|
|
| PRK10819 |
PRK10819 |
transport protein TonB; Provisional |
459-583 |
2.28e-03 |
|
transport protein TonB; Provisional
Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 41.21 E-value: 2.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 459 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEpttpKEPEPttpkEPEPTTPKE-PEPTTPKEPEPTTPKEPEPTTPK 537
Cdd:PRK10819 42 PAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPE----PEPEP----IPEPPKEAPvVIPKPEPKPKPKPKPKPKPVKKV 113
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1907070833 538 EPEPTtlKEPEPTTPKEPEPTTPKEPEPTTlkePEPTTPKEPEPTT 583
Cdd:PRK10819 114 EEQPK--REVKPVEPRPASPFENTAPARPT---SSTATAAASKPVT 154
|
|
| PRK10905 |
PRK10905 |
cell division protein DamX; Validated |
454-561 |
2.29e-03 |
|
cell division protein DamX; Validated
Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 41.46 E-value: 2.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 454 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT-PKEPEPTTPKEPEPT--TPKEPEPTTPKEPepttPKE 530
Cdd:PRK10905 122 TLPTEPATVAPVRNGNASRQTAKTQTAERPATTRPARKQAVIePKKPQATAKTEPKPVaqTPKRTEPAAPVAS----TKA 197
|
90 100 110
....*....|....*....|....*....|..
gi 1907070833 531 PEPTTPKEPEPTTLKEPEPT-TPKEPEPTTPK 561
Cdd:PRK10905 198 PAATSTPAPKETATTAPVQTaSPAQTTATPAA 229
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
595-784 |
2.37e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 42.23 E-value: 2.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 595 PEPTTTKEPESTtrKEPEPTTPKEPEPTTPKEPEPTTPKEPEP---------TTPKEPEPTTPKEPEPTTPKEPEPTTPK 665
Cdd:PHA03247 255 PAPPPVVGEGAD--RAPETARGATGPPPPPEAAAPNGAAAPPDgvwgaalagAPLALPAPPDPPPPAPAGDAEEEDDEDG 332
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 666 EPEPTTP---------------KKPEPTTPKEPEPTTPKEPEP---TTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTT 727
Cdd:PHA03247 333 AMEVVSPlprprqhyplgfpkrRRPTWTPPSSLEDLSAGRHHPkraSLPTRKRRSARHAATPFARGPGGDDQTRPAAPVP 412
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070833 728 PKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTPASEDSDDS 784
Cdd:PHA03247 413 ASVPTPAPTPVPASAPPPPATPLPSAEPGSDDGPAPPPERQPPAPATEPAPDDPDDA 469
|
|
| PHA03264 |
PHA03264 |
envelope glycoprotein D; Provisional |
438-543 |
2.42e-03 |
|
envelope glycoprotein D; Provisional
Pssm-ID: 223029 [Multi-domain] Cd Length: 416 Bit Score: 41.91 E-value: 2.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 438 TTPKEPEPTTLKEPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 517
Cdd:PHA03264 253 VVPPYFEESKGYEPPPA-PSGGSPAPPGDDRPEAKPEPGPVEDGAPGRETGGEGEGPEPAGRDGAAGGEPKPGPPRPAPD 331
|
90 100
....*....|....*....|....*..
gi 1907070833 518 TTPKEPEPTTPKEP-EPTTPKEPEPTT 543
Cdd:PHA03264 332 ADRPEGWPSLEAITfPPPTPATPAVPR 358
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
411-591 |
2.62e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 42.23 E-value: 2.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 411 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTP----KEPEPTTL---KEPEPTTPKEPEPTTPKEPEP---TTPKEPEPTTP 480
Cdd:PHA03247 310 PAPPDPPPPAPAGDAEEEDDEDGAMEVVSPlprpRQHYPLGFpkrRRPTWTPPSSLEDLSAGRHHPkraSLPTRKRRSAR 389
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 481 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP--EPTTPKEPEPT-TPKEPE-PTTPKEPEPTTlkEPEPTTPKEPE 556
Cdd:PHA03247 390 HAATPFARGPGGDDQTRPAAPVPASVPTPAPTPVPasAPPPPATPLPSaEPGSDDgPAPPPERQPPA--PATEPAPDDPD 467
|
170 180 190
....*....|....*....|....*....|....*
gi 1907070833 557 PTTPKEPEptTLKEPEPTTPKEPEPTTLKEPEPTT 591
Cdd:PHA03247 468 DATRKALD--ALRERRPPEPPGADLAELLGRHPDT 500
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
419-528 |
2.66e-03 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 40.76 E-value: 2.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 419 PEPTTPKEPEPTTPKEPepTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPepttpkEPEPTTPKEPEPTTPKE 498
Cdd:PRK11633 45 PKPGDRDEPDMMPAATQ--ALPTQPPEGAAEAVRAGDAAAPSLDPATVAPPNTPVEP------EPAPVEPPKPKPVEKPK 116
|
90 100 110
....*....|....*....|....*....|
gi 1907070833 499 PEPTTPKEPEPttPKEPEPTTPKEPEPTTP 528
Cdd:PRK11633 117 PKPKPQQKVEA--PPAPKPEPKPVVEEKAA 144
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
433-499 |
2.72e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 41.91 E-value: 2.72e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070833 433 KEPEPTTPKEPEPttlkePEPTTPKEPEPTTPKEPEPTTPKEPePTTPKEPEPTTPKEPEPTTPKEP 499
Cdd:COG5373 40 AAEAASAPAEPEP-----EAAAAATAAAPEAAPAPVPEAPAAP-PAAAEAPAPAAAAPPAEAEPAAA 100
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
430-490 |
2.78e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 41.42 E-value: 2.78e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070833 430 TTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 490
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
438-498 |
2.82e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 41.42 E-value: 2.82e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070833 438 TTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 498
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| PRK12757 |
PRK12757 |
cell division protein FtsN; Provisional |
444-524 |
2.89e-03 |
|
cell division protein FtsN; Provisional
Pssm-ID: 237191 [Multi-domain] Cd Length: 256 Bit Score: 40.80 E-value: 2.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 444 EPTTLKE-PE-PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 521
Cdd:PRK12757 98 QPTQLSEvPYnEQTPQVPRSTVQIQQQAQQQQPPATTAQPQPVTPPRQTTAPVQPQTPAPVRTQPAAPVTQAVEAPKVEA 177
|
...
gi 1907070833 522 EPE 524
Cdd:PRK12757 178 EKE 180
|
|
| PRK12757 |
PRK12757 |
cell division protein FtsN; Provisional |
655-724 |
3.02e-03 |
|
cell division protein FtsN; Provisional
Pssm-ID: 237191 [Multi-domain] Cd Length: 256 Bit Score: 40.80 E-value: 3.02e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 655 TPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPE 724
Cdd:PRK12757 111 TPQVPRSTVQIQQQAQQQQPPATTAQPQPVTPPRQTTAPVQPQTPAPVRTQPAAPVTQAVEAPKVEAEKE 180
|
|
| PRK10819 |
PRK10819 |
transport protein TonB; Provisional |
651-759 |
3.04e-03 |
|
transport protein TonB; Provisional
Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 40.82 E-value: 3.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 651 PEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTRKEPEPTTPKEPEPTTPK 729
Cdd:PRK10819 42 PAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPvVIPKPEPKPKPKPKPKPKPVKKVEEQPKREV 121
|
90 100 110
....*....|....*....|....*....|
gi 1907070833 730 EPEPTTPKKPEPTTTSPKTTTLKATTLAPK 759
Cdd:PRK10819 122 KPVEPRPASPFENTAPARPTSSTATAAASK 151
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
422-482 |
3.05e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 41.42 E-value: 3.05e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070833 422 TTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 482
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
585-651 |
3.08e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 41.91 E-value: 3.08e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070833 585 KEPEPTTPKEPEPTTTKEPEsttrkEPEPTTPKEPEPTTPKEPePTTPKEPEPTTPKEPEPTTPKEP 651
Cdd:COG5373 40 AAEAASAPAEPEPEAAAAAT-----AAAPEAAPAPVPEAPAAP-PAAAEAPAPAAAAPPAEAEPAAA 100
|
|
| PRK13335 |
PRK13335 |
superantigen-like protein SSL3; Reviewed; |
602-705 |
3.12e-03 |
|
superantigen-like protein SSL3; Reviewed;
Pssm-ID: 139494 [Multi-domain] Cd Length: 356 Bit Score: 41.27 E-value: 3.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 602 EPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEpEPTTPKEPEPTTPKEPEPTTpkEPEPTTPKePEPTTPkkPEPTTPK 681
Cdd:PRK13335 69 RQERTPKLEKAPNTNEEKTSASKIEKISQPKQE-EQKSLNISATPAPKQEQSQT--TTESTTPK-TKVTTP--PSTNTPQ 142
|
90 100
....*....|....*....|....*
gi 1907070833 682 EPEPTTPKEPE-PTTPKEPEPTTPK 705
Cdd:PRK13335 143 PMQSTKSDTPQsPTIKQAQTDMTPK 167
|
|
| PRK10905 |
PRK10905 |
cell division protein DamX; Validated |
454-576 |
3.19e-03 |
|
cell division protein DamX; Validated
Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 41.08 E-value: 3.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 454 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT-PKEPEPTTPKEPEPT--TPKE 530
Cdd:PRK10905 106 TQPQNQQQLNNVAVNSTLPTEPATVAPVRNGNASRQTAKTQTAERPATTRPARKQAVIePKKPQATAKTEPKPVaqTPKR 185
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1907070833 531 PEPTTPKEPEPTtlkePEPTTPKEPEPTTPKEPEPTTLKEPEPTTP 576
Cdd:PRK10905 186 TEPAAPVASTKA----PAATSTPAPKETATTAPVQTASPAQTTATP 227
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
407-467 |
3.19e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 41.91 E-value: 3.19e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907070833 407 TRKEPEPTTPKEPEPT---TPKEPEPTTPKEPEPTTPKEPEPTTlKEPEPTTPKEPEPTTPKEP 467
Cdd:COG5373 38 AEAAEAASAPAEPEPEaaaAATAAAPEAAPAPVPEAPAAPPAAA-EAPAPAAAAPPAEAEPAAA 100
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
619-691 |
3.31e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 41.21 E-value: 3.31e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907070833 619 PEPTTPKEPEPTTPKePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEP 691
Cdd:PTZ00144 122 GAPPAAAPAAAAAAK-AEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRETRVP 193
|
|
| PRK10905 |
PRK10905 |
cell division protein DamX; Validated |
478-606 |
3.39e-03 |
|
cell division protein DamX; Validated
Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 41.08 E-value: 3.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 478 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT-PKEPEPTTLKEPEPT--TPKE 554
Cdd:PRK10905 106 TQPQNQQQLNNVAVNSTLPTEPATVAPVRNGNASRQTAKTQTAERPATTRPARKQAVIePKKPQATAKTEPKPVaqTPKR 185
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 1907070833 555 PEPTTPKEPEPTtlkePEPTTPKEPEPTTLKEPEPT-TPKEPEPTTTKEPEST 606
Cdd:PRK10905 186 TEPAAPVASTKA----PAATSTPAPKETATTAPVQTaSPAQTTATPAAGGKTA 234
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
470-538 |
3.46e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 41.21 E-value: 3.46e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 470 TTPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 538
Cdd:PTZ00144 120 TGGAPPAAAPAAAAAAKAEKtTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRE 189
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
462-530 |
3.46e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 41.21 E-value: 3.46e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 462 TTPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 530
Cdd:PTZ00144 120 TGGAPPAAAPAAAAAAKAEKtTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRE 189
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
454-522 |
3.46e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 41.21 E-value: 3.46e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 454 TTPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 522
Cdd:PTZ00144 120 TGGAPPAAAPAAAAAAKAEKtTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRE 189
|
|
| PRK10905 |
PRK10905 |
cell division protein DamX; Validated |
486-625 |
3.57e-03 |
|
cell division protein DamX; Validated
Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 41.08 E-value: 3.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 486 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPepTTPKEPEPTTPKEPEPTTLKEPepttpKEPEPTTPKEPEP 565
Cdd:PRK10905 106 TQPQNQQQLNNVAVNSTLPTEPATVAPVRNGNASRQTA--KTQTAERPATTRPARKQAVIEP-----KKPQATAKTEPKP 178
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070833 566 TtlkepePTTPKEPEPTTlkepEPTTPKEPEPTTTKEPESTTRKEPEPT-TPKEPEPTTPK 625
Cdd:PRK10905 179 V------AQTPKRTEPAA----PVASTKAPAATSTPAPKETATTAPVQTaSPAQTTATPAA 229
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
613-778 |
3.62e-03 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 41.56 E-value: 3.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 613 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpkEPEPTTPKEPEPTTPkkPEPTTPKEPEPTTPKEPE 692
Cdd:PRK10811 846 PVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVV--EAVAEVVEEPVVVAE--PQPEEVVVVETTHPEVIA 921
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 693 PTTPKEPEPTTPKE---PEPTTRkEPEPTTPKEPEPTTPKEPEPTT---PKKPEPTTTSPKTTTLKATTLAPKVTAPAEE 766
Cdd:PRK10811 922 APVTEQPQVITESDvavAQEVAE-HAEPVVEPQDETADIEEAAETAevvVAEPEVVAQPAAPVVAEVAAEVETVTAVEPE 1000
|
170
....*....|..
gi 1907070833 767 IQNKPEETTPAS 778
Cdd:PRK10811 1001 VAPAQVPEATVE 1012
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
641-699 |
3.72e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 41.52 E-value: 3.72e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907070833 641 KEPEPTTPKEPEPT---TPKEPEPTTPKEPEPTTPkKPEPTTPKEPEPTTPKEPEPTTPKEP 699
Cdd:COG5373 40 AAEAASAPAEPEPEaaaAATAAAPEAAPAPVPEAP-AAPPAAAEAPAPAAAAPPAEAEPAAA 100
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
497-555 |
3.75e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 41.52 E-value: 3.75e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907070833 497 KEPEPTTPKEPEPT---TPKEPEPTTPKEPEPTTPKEPePTTPKEPEPTTLKEPEPTTPKEP 555
Cdd:COG5373 40 AAEAASAPAEPEPEaaaAATAAAPEAAPAPVPEAPAAP-PAAAEAPAPAAAAPPAEAEPAAA 100
|
|
| PRK10905 |
PRK10905 |
cell division protein DamX; Validated |
414-529 |
3.86e-03 |
|
cell division protein DamX; Validated
Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 40.69 E-value: 3.86e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 414 TTPKEPEPTTP------KEPEPTTPKEPEPTTPKEPEPTTLKEPepttpKEPEPTTPKEPEPTtpkepePTTPKEPEPTT 487
Cdd:PRK10905 122 TLPTEPATVAPvrngnaSRQTAKTQTAERPATTRPARKQAVIEP-----KKPQATAKTEPKPV------AQTPKRTEPAA 190
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 1907070833 488 PKEPepttPKEPEPTTPKEPEPTTPKEPEPT-TPKEPEPTTPK 529
Cdd:PRK10905 191 PVAS----TKAPAATSTPAPKETATTAPVQTaSPAQTTATPAA 229
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
657-723 |
3.88e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 41.52 E-value: 3.88e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070833 657 KEPEPTTPKEPEPTTPKKPEpttpkEPEPTTPKEPEPTTPKEPePTTPKEPEPTTRKEPEPTTPKEP 723
Cdd:COG5373 40 AAEAASAPAEPEPEAAAAAT-----AAAPEAAPAPVPEAPAAP-PAAAEAPAPAAAAPPAEAEPAAA 100
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
483-555 |
3.90e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 41.21 E-value: 3.90e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907070833 483 PEPTTPKEPEPTTPKePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEP 555
Cdd:PTZ00144 122 GAPPAAAPAAAAAAK-AEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRETRVP 193
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
582-642 |
3.99e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 41.03 E-value: 3.99e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070833 582 TTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 642
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
603-686 |
4.08e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 41.21 E-value: 4.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 603 PESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPepttPKEPEPTTPKEPEPTTPKEPEPTtpkEPEPTTPKKPEPTTPKE 682
Cdd:PTZ00144 114 PLSEIDTGGAPPAAAPAAAAAAKAEKTTPEKPK----AAAPTPEPPAASKPTPPAAAKPP---EPAPAAKPPPTPVARAD 186
|
....
gi 1907070833 683 PEPT 686
Cdd:PTZ00144 187 PRET 190
|
|
| PRK01297 |
PRK01297 |
ATP-dependent RNA helicase RhlB; Provisional |
613-676 |
4.19e-03 |
|
ATP-dependent RNA helicase RhlB; Provisional
Pssm-ID: 234938 [Multi-domain] Cd Length: 475 Bit Score: 41.05 E-value: 4.19e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907070833 613 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPE 676
Cdd:PRK01297 13 EAEQPAPAPPSPAAAPAPPPPAKTAAPATKAAAPAAAAPRAEKPKKDKPRRERKPKPASLWKLE 76
|
|
| PRK01297 |
PRK01297 |
ATP-dependent RNA helicase RhlB; Provisional |
637-712 |
4.27e-03 |
|
ATP-dependent RNA helicase RhlB; Provisional
Pssm-ID: 234938 [Multi-domain] Cd Length: 475 Bit Score: 41.05 E-value: 4.27e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070833 637 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTR 712
Cdd:PRK01297 13 EAEQPAPAPPSPAAAPAPPPPAKTAAPATKAAAPAAAAPRAEKPKKDKPRRERKPKPASLWKLEDFVVEPQEGKTR 88
|
|
| PHA03264 |
PHA03264 |
envelope glycoprotein D; Provisional |
604-703 |
4.28e-03 |
|
envelope glycoprotein D; Provisional
Pssm-ID: 223029 [Multi-domain] Cd Length: 416 Bit Score: 41.14 E-value: 4.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 604 ESTTRKEPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEP 683
Cdd:PHA03264 259 EESKGYEPPPA-PSGGSPAPPGDDRPEAKPEPGPVEDGAPGRETGGEGEGPEPAGRDGAAGGEPKPGPPRPAPDADRPEG 337
|
90 100
....*....|....*....|.
gi 1907070833 684 EPTTPKEP-EPTTPKEPEPTT 703
Cdd:PHA03264 338 WPSLEAITfPPPTPATPAVPR 358
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
432-498 |
4.33e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 40.82 E-value: 4.33e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070833 432 PKEPEPTTPKEPEPTTlKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 498
Cdd:PTZ00144 124 PPAAAPAAAAAAKAEK-TTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRE 189
|
|
| PRK13335 |
PRK13335 |
superantigen-like protein SSL3; Reviewed; |
535-633 |
4.50e-03 |
|
superantigen-like protein SSL3; Reviewed;
Pssm-ID: 139494 [Multi-domain] Cd Length: 356 Bit Score: 40.88 E-value: 4.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 535 TPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTlkEPEPTTPKepePTTTKEPESTTRKEPEPT 614
Cdd:PRK13335 73 TPKLEKAPNTNEEKTSASKIEKISQPKQEEQKSLNISATPAPKQEQSQT--TTESTTPK---TKVTTPPSTNTPQPMQST 147
|
90 100
....*....|....*....|
gi 1907070833 615 TPKEPE-PTTPKEPEPTTPK 633
Cdd:PRK13335 148 KSDTPQsPTIKQAQTDMTPK 167
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
649-712 |
4.56e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 41.14 E-value: 4.56e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070833 649 KEPEPTTPKEPEPT---TPKEPEPTTPKKPEPTTPKEPePTTPKEPEPTTPKEPEPTTPKEPEPTTR 712
Cdd:COG5373 40 AAEAASAPAEPEPEaaaAATAAAPEAAPAPVPEAPAAP-PAAAEAPAPAAAAPPAEAEPAAAPAAAS 105
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
638-698 |
4.63e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 40.65 E-value: 4.63e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070833 638 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKE 698
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
646-706 |
4.63e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 40.65 E-value: 4.63e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070833 646 TTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 706
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
622-694 |
4.64e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 40.82 E-value: 4.64e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907070833 622 TTPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKkpePTTPKEPEPTTPKEPEPT 694
Cdd:PTZ00144 120 TGGAPPAAAPAAAAAAKAEKtTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPA---PAAKPPPTPVARADPRET 190
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
411-595 |
4.69e-03 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 41.07 E-value: 4.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 411 PEPTTPKEPEPT----TPKEPEPTTPKEPEPTT---PKEPEPTTLKEPEPTTP--KEPEPTTPKEPEPTTPKEPEPTTPK 481
Cdd:PLN03209 388 PTPPSSSPASSKsvdaVAKPAEPDVVPSPGSASnvpEVEPAQVEAKKTRPLSPyaRYEDLKPPTSPSPTAPTGVSPSVSS 467
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 482 epEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpkePEPTTPKEPEPTTLKEPEPTTPKEPEPTTPK 561
Cdd:PLN03209 468 --TSSVPAVPDTAPATAATDAAAPPPANMRPLSPYAVYDDLKPPTS---PSPAAPVGKVAPSSTNEVVKVGNSAPPTALA 542
|
170 180 190
....*....|....*....|....*....|....
gi 1907070833 562 EPEPTTLKEPEPTTPKePEPTTLKEPEPTTPKEP 595
Cdd:PLN03209 543 DEQHHAQPKPRPLSPY-TMYEDLKPPTSPTPSPV 575
|
|
| PRK01297 |
PRK01297 |
ATP-dependent RNA helicase RhlB; Provisional |
621-684 |
4.73e-03 |
|
ATP-dependent RNA helicase RhlB; Provisional
Pssm-ID: 234938 [Multi-domain] Cd Length: 475 Bit Score: 41.05 E-value: 4.73e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907070833 621 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPE 684
Cdd:PRK01297 13 EAEQPAPAPPSPAAAPAPPPPAKTAAPATKAAAPAAAAPRAEKPKKDKPRRERKPKPASLWKLE 76
|
|
| PRK13042 |
PRK13042 |
superantigen-like protein SSL4; Reviewed; |
622-705 |
4.76e-03 |
|
superantigen-like protein SSL4; Reviewed;
Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 40.39 E-value: 4.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 622 TTPKEPEPTTPKEPEPTTPKEPEPTTpkepEPTTPKE-PEPTTPKEPEPTTPK-KPEPTTPKEPEPTTPKepEPTTPKEP 699
Cdd:PRK13042 23 TTTQAANATTPSSTKVEAPQSTPPST----KVEAPQSkPNATTPPSTKVEAPQqTPNATTPSSTKVETPQ--SPTTKQVP 96
|
....*.
gi 1907070833 700 EPTTPK 705
Cdd:PRK13042 97 TEINPK 102
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
408-498 |
4.77e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 41.00 E-value: 4.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 408 RKEPEPTTPKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTL-KEPEPTTPKEPEPTTP---KEPEPTTPKEPEP--TTPK 481
Cdd:PRK07994 430 QRAQGATKAKKSEPAAASRARPV-NSALERLASVRPAPSALeKAPAKKEAYRWKATNPvevKKEPVATPKALKKalEHEK 508
|
90
....*....|....*..
gi 1907070833 482 EPEPTTPKEPEPTTPKE 498
Cdd:PRK07994 509 TPELAAKLAAEAIERDP 525
|
|
| PRK14949 |
PRK14949 |
DNA polymerase III subunits gamma and tau; Provisional |
604-781 |
4.77e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237863 [Multi-domain] Cd Length: 944 Bit Score: 41.25 E-value: 4.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 604 ESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTT--PK 681
Cdd:PRK14949 633 EGDGKKSSADRKPKTPPSRAPPASLSKPASSPDASQTSASFDLDPDFELATHQSVPEAALASGSAPAPPPVPDPYDrpPW 712
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 682 EPEPTTpkEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPkkpeptttspktttlkatTLAPKVT 761
Cdd:PRK14949 713 EEAPEV--ASANDGPNNAAEGNLSESVEDASNSELQAVEQQATHQPQVQAEAQSP------------------ASTTALT 772
|
170 180
....*....|....*....|
gi 1907070833 762 APAEEIQNKPEETTPASEDS 781
Cdd:PRK14949 773 QTSSEVQDTELNLVLLSSGS 792
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
630-702 |
4.80e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 40.82 E-value: 4.80e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907070833 630 TTPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPTTPKKPEPTtpkEPEPTTPKEPEPTTPKEPEPT 702
Cdd:PTZ00144 120 TGGAPPAAAPAAAAAAKAEKtTPEKPKAAAPTPEPPAASKPTPPAAAKPP---EPAPAAKPPPTPVARADPRET 190
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
417-483 |
4.96e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 41.14 E-value: 4.96e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070833 417 KEPEPTTPKEPEPTTPKEPEpttpkEPEPTTLKEPEPTTPKEPePTTPKEPEPTTPKEPEPTTPKEP 483
Cdd:COG5373 40 AAEAASAPAEPEPEAAAAAT-----AAAPEAAPAPVPEAPAAP-PAAAEAPAPAAAAPPAEAEPAAA 100
|
|
| dnaA |
PRK14086 |
chromosomal replication initiator protein DnaA; |
588-781 |
4.98e-03 |
|
chromosomal replication initiator protein DnaA;
Pssm-ID: 237605 [Multi-domain] Cd Length: 617 Bit Score: 40.96 E-value: 4.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 588 EPTTPKEPEPTTTKEPESTT--RKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEpepTTPKEPEPtTPKEPEPTTPK 665
Cdd:PRK14086 93 GEPAPPPPHARRTSEPELPRpgRRPYEGYGGPRADDRPPGLPRQDQLPTARPAYPAY---QQRPEPGA-WPRAADDYGWQ 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 666 EPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRkePEPTTPKEPEPTTPkEPEPTTPKKPEPTTTS 745
Cdd:PRK14086 169 QQRLGFPPRAPYASPASYAPEQERDREPYDAGRPEYDQRRRDYDHPR--PDWDRPRRDRTDRP-EPPPGAGHVHRGGPGP 245
|
170 180 190
....*....|....*....|....*....|....*.
gi 1907070833 746 PKTTTLKATTLAPKvtAPAEEIQNKPEETTPASEDS 781
Cdd:PRK14086 246 PERDDAPVVPIRPS--APGPLAAQPAPAPGPGEPTA 279
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
643-738 |
5.01e-03 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 39.99 E-value: 5.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 643 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKKPEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPK 721
Cdd:PRK11633 45 PKPGDRDEPDMMPAaTQALPTQPPEGAAEAVRAGDAAAP-SLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQ 123
|
90
....*....|....*..
gi 1907070833 722 EPEPTTPKEPEPTTPKK 738
Cdd:PRK11633 124 KVEAPPAPKPEPKPVVE 140
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
630-690 |
5.05e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 40.65 E-value: 5.05e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070833 630 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKE 690
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| PRK10905 |
PRK10905 |
cell division protein DamX; Validated |
422-537 |
5.06e-03 |
|
cell division protein DamX; Validated
Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 40.69 E-value: 5.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 422 TTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTT-PKEPEPTTPKEPEPTtpkepePTTPKEPEPTTPKEPe 500
Cdd:PRK10905 122 TLPTEPATVAPVRNGNASRQTAKTQTAERPATTRPARKQAVIePKKPQATAKTEPKPV------AQTPKRTEPAAPVAS- 194
|
90 100 110
....*....|....*....|....*....|....*...
gi 1907070833 501 pttPKEPEPTTPKEPEPTTPKEPEPT-TPKEPEPTTPK 537
Cdd:PRK10905 195 ---TKAPAATSTPAPKETATTAPVQTaSPAQTTATPAA 229
|
|
| PRK01297 |
PRK01297 |
ATP-dependent RNA helicase RhlB; Provisional |
629-692 |
5.20e-03 |
|
ATP-dependent RNA helicase RhlB; Provisional
Pssm-ID: 234938 [Multi-domain] Cd Length: 475 Bit Score: 40.67 E-value: 5.20e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907070833 629 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPE 692
Cdd:PRK01297 13 EAEQPAPAPPSPAAAPAPPPPAKTAAPATKAAAPAAAAPRAEKPKKDKPRRERKPKPASLWKLE 76
|
|
| PRK12757 |
PRK12757 |
cell division protein FtsN; Provisional |
639-712 |
5.30e-03 |
|
cell division protein FtsN; Provisional
Pssm-ID: 237191 [Multi-domain] Cd Length: 256 Bit Score: 40.03 E-value: 5.30e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907070833 639 TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTR 712
Cdd:PRK12757 111 TPQVPRSTVQIQQQAQQQQPPATTAQPQPVTPPRQTTAPVQPQTPAPVRTQPAAPVTQAVEAPKVEAEKEKEQR 184
|
|
| SAV_2336_NTERM |
NF041121 |
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ... |
459-534 |
5.31e-03 |
|
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.
Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 40.76 E-value: 5.31e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070833 459 PEPTTPKEPEPTTPKEPEPTTP---KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPT 534
Cdd:NF041121 19 AAPPSPEGPAPTAASQPATPPPpaaPPSPPGDPPEPPAPEPAPLPAPYPGSLAPPPPPPPGPAGAAPGAALPVRVPAPP 97
|
|
| SAV_2336_NTERM |
NF041121 |
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ... |
635-710 |
5.36e-03 |
|
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.
Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 40.76 E-value: 5.36e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070833 635 PEPTTPKEPEPTTPKEPEPTTP---KEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPT 710
Cdd:NF041121 19 AAPPSPEGPAPTAASQPATPPPpaaPPSPPGDPPEPPAPEPAPLPAPYPGSLAPPPPPPPGPAGAAPGAALPVRVPAPP 97
|
|
| PRK12757 |
PRK12757 |
cell division protein FtsN; Provisional |
631-700 |
5.44e-03 |
|
cell division protein FtsN; Provisional
Pssm-ID: 237191 [Multi-domain] Cd Length: 256 Bit Score: 40.03 E-value: 5.44e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 631 TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPE 700
Cdd:PRK12757 111 TPQVPRSTVQIQQQAQQQQPPATTAQPQPVTPPRQTTAPVQPQTPAPVRTQPAAPVTQAVEAPKVEAEKE 180
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
526-606 |
5.51e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 40.44 E-value: 5.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 526 TTPKEPEPTTPKEPEPttlkEPEPTTPKEPEPTTPKEPEPttlKEPEPTTPKEPEPTtlkEPEPTTPKEPEPTTTKEPES 605
Cdd:PTZ00144 120 TGGAPPAAAPAAAAAA----KAEKTTPEKPKAAAPTPEPP---AASKPTPPAAAKPP---EPAPAAKPPPTPVARADPRE 189
|
.
gi 1907070833 606 T 606
Cdd:PTZ00144 190 T 190
|
|
| PRK14960 |
PRK14960 |
DNA polymerase III subunit gamma/tau; |
645-725 |
5.63e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237868 [Multi-domain] Cd Length: 702 Bit Score: 40.80 E-value: 5.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 645 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTT----PKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTP 720
Cdd:PRK14960 360 PLAPNEILVSEPVQQNGQAEVGLNSQAQTAQEITPVSAVQPVEvisqPAMVEPEPEPEPEPEPEPEPEPEPEPEPEPEPE 439
|
....*
gi 1907070833 721 KEPEP 725
Cdd:PRK14960 440 PEPQP 444
|
|
| SAV_2336_NTERM |
NF041121 |
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ... |
427-510 |
5.64e-03 |
|
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.
Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 40.76 E-value: 5.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 427 PEPTTPKEPEPTTPKEPEPTtlkePEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 506
Cdd:NF041121 19 AAPPSPEGPAPTAASQPATP----PPPAAP-PSPPGDPPEPPAPEPAPLPAPYPGSLAPPPPPPPGPAGAAPGAALPVRV 93
|
....
gi 1907070833 507 PEPT 510
Cdd:NF041121 94 PAPP 97
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
627-699 |
5.66e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 40.44 E-value: 5.66e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907070833 627 PEPTTPKEPEPTTPKePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEP 699
Cdd:PTZ00144 122 GAPPAAAPAAAAAAK-AEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRETRVP 193
|
|
| dnaA |
PRK14086 |
chromosomal replication initiator protein DnaA; |
514-718 |
5.81e-03 |
|
chromosomal replication initiator protein DnaA;
Pssm-ID: 237605 [Multi-domain] Cd Length: 617 Bit Score: 40.96 E-value: 5.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 514 EPEPTTPkepePTTPKEPEPTTPKEPEPTTLKEPEPttpkEPEPTTPKEPEPTTLKEPEPTTPKEPEPttlkePEPTT-P 592
Cdd:PRK14086 93 GEPAPPP----PHARRTSEPELPRPGRRPYEGYGGP----RADDRPPGLPRQDQLPTARPAYPAYQQR-----PEPGAwP 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 593 KEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpkEPEPTTPKEPEPTTPkEPEPTTP 672
Cdd:PRK14086 160 RAADDYGWQQQRLGFPPRAPYASPASYAPEQERDREPYDAGRPEYDQRRRDYDHP--RPDWDRPRRDRTDRP-EPPPGAG 236
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 1907070833 673 KKPEPTTPKEPEPTTPKEPE----PTTPKEPEPTTPKEPEPTTRKEPEPT 718
Cdd:PRK14086 237 HVHRGGPGPPERDDAPVVPIrpsaPGPLAAQPAPAPGPGEPTARLNPKYT 286
|
|
| SAV_2336_NTERM |
NF041121 |
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ... |
419-502 |
6.04e-03 |
|
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.
Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 40.76 E-value: 6.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 419 PEPTTPKEPEPTTPKEPEPTTPKEPEPttlkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 498
Cdd:NF041121 19 AAPPSPEGPAPTAASQPATPPPPAAPP-----SPPGDPPEPPAPEPAPLPAPYPGSLAPPPPPPPGPAGAAPGAALPVRV 93
|
....
gi 1907070833 499 PEPT 502
Cdd:NF041121 94 PAPP 97
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
505-563 |
6.08e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 40.75 E-value: 6.08e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907070833 505 KEPEPTTPKEPEPT---TPKEPEPTTPKEPEPTTPKEPEPTTlKEPEPTTPKEPEPTTPKEP 563
Cdd:COG5373 40 AAEAASAPAEPEPEaaaAATAAAPEAAPAPVPEAPAAPPAAA-EAPAPAAAAPPAEAEPAAA 100
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
377-560 |
6.13e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 40.63 E-value: 6.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 377 KEPEPTTPKEPEPTTTKEPEPTTTKEPESTTRKEPEPTTPKEP--EPTTPKEPEPTTPKEPEPTTPKEPEPttlkePEPT 454
Cdd:PRK12323 398 APAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASarGPGGAPAPAPAPAAAPAAAARPAAAG-----PRPV 472
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 455 TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP--TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 532
Cdd:PRK12323 473 AAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPaqPDAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPR 552
|
170 180
....*....|....*....|....*...
gi 1907070833 533 PTTPKEPEPTtlkepePTTPKEPEPTTP 560
Cdd:PRK12323 553 AAAATEPVVA------PRPPRASASGLP 574
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
681-738 |
6.18e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 40.75 E-value: 6.18e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070833 681 KEPEPTTPKEPEPT---TPKEPEPTTPKEPEPtTRKEPEPTTPKEPEPTTPKEPEPTTPKK 738
Cdd:COG5373 40 AAEAASAPAEPEPEaaaAATAAAPEAAPAPVP-EAPAAPPAAAEAPAPAAAAPPAEAEPAA 99
|
|
| Pneumo_att_G |
pfam05539 |
Pneumovirinae attachment membrane glycoprotein G; |
612-772 |
6.27e-03 |
|
Pneumovirinae attachment membrane glycoprotein G;
Pssm-ID: 114270 [Multi-domain] Cd Length: 408 Bit Score: 40.42 E-value: 6.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 612 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTT---PKEPEPTTP 688
Cdd:pfam05539 167 EPKTAVTTSKTTSWPTEVSHPTYPSQVTPQSQPATQGHQTATANQRLSSTEPVGTQGTTTSSNPEPQTeppPSQRGPSGS 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 689 KEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAeeIQ 768
Cdd:pfam05539 247 PQHPPSTTSQDQSTTGDGQEHTQRRKTPPATSNRRSPHSTATPPPTTKRQETGRPTPRPTATTQSGSSPPHSSPPG--VQ 324
|
....
gi 1907070833 769 NKPE 772
Cdd:pfam05539 325 ANPT 328
|
|
| PHA03377 |
PHA03377 |
EBNA-3C; Provisional |
408-736 |
6.28e-03 |
|
EBNA-3C; Provisional
Pssm-ID: 177614 [Multi-domain] Cd Length: 1000 Bit Score: 40.81 E-value: 6.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 408 RKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTT-PKEPEPTTPKEPEPT 486
Cdd:PHA03377 549 RATPPKVSPSDRGPPKASPPVMAPPSTGPRVMATPSTGPRDMAPPSTGPRQQAKCKDGPPASGPhEKQPPSSAPRDMAPS 628
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 487 TPKE-------PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP--EPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEP 557
Cdd:PHA03377 629 VVRMflrerllEQSTGPKPKSFWEMRAGRDGSGIQQEPSSRRQPatQSTPPRPSWLPSVFVLPSVDAGRAQPSEESHLSS 708
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 558 TTPKEP----EPTTLKEPEPTTPKEPEPTTLKEPEPTTPKE--PEPTTTKEPESTTRKEPEPTTP----KEPEPTTPKEP 627
Cdd:PHA03377 709 MSPTQPisheEQPRYEDPDDPLDLSLHPDQAPPPSHQAPYSghEEPQAQQAPYPGYWEPRPPQAPylgyQEPQAQGVQVS 788
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 628 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPepttPKEPEPTTPKEP 707
Cdd:PHA03377 789 SYPGYAGPWGLRAQHPRYRHSWAYWSQYPGHGHPQGPWAPRPPHLPPQWDGSAGHGQDQVSQFP----HLQSETGPPRLQ 864
|
330 340
....*....|....*....|....*....
gi 1907070833 708 EPTTRKEPEPTTPKEPEPTTPKEPEPTTP 736
Cdd:PHA03377 865 LSQVPQLPYSQTLVSSSAPSWSSPQPRAP 893
|
|
| PRK10905 |
PRK10905 |
cell division protein DamX; Validated |
413-505 |
6.30e-03 |
|
cell division protein DamX; Validated
Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 40.31 E-value: 6.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 413 PTTPKEPEPTTPKEPEPTT---PKEPEPTTPKEPEPTtlkepePTTPKEPEPTTPKEPepttPKEPEPTTPKEPEPTTPK 489
Cdd:PRK10905 143 AKTQTAERPATTRPARKQAviePKKPQATAKTEPKPV------AQTPKRTEPAAPVAS----TKAPAATSTPAPKETATT 212
|
90
....*....|....*..
gi 1907070833 490 EPEPT-TPKEPEPTTPK 505
Cdd:PRK10905 213 APVQTaSPAQTTATPAA 229
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
494-554 |
6.43e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 40.26 E-value: 6.43e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070833 494 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKE 554
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| SAV_2336_NTERM |
NF041121 |
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ... |
611-685 |
6.53e-03 |
|
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.
Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 40.37 E-value: 6.53e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1907070833 611 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkePEPTTPkEPEPTTPKKPEPTTPKEPEP 685
Cdd:NF041121 19 AAPPSPEGPAPTAASQPATPPPPAAPPSPPGDPPEPPAPEPAPLPA--PYPGSL-APPPPPPPGPAGAAPGAALP 90
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
461-898 |
6.57e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 40.74 E-value: 6.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 461 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 540
Cdd:PRK07764 386 GVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQ 465
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 541 PTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEpTTTKEPESTTR-KEPEPTtPKEP 619
Cdd:PRK07764 466 PAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAATLRERWPEILA-AVPKRSRKTWAiLLPEAT-VLGV 543
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 620 EPTT----------------PKEPE--------------------PTTPKEPEPTTPKEPEPTTPKEPEPttpkepEPTT 663
Cdd:PRK07764 544 RGDTlvlgfstgglarrfasPGNAEvlvtalaeelggdwqveavvGPAPGAAGGEGPPAPASSGPPEEAA------RPAA 617
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 664 PKEPEPTTPKKPePTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKE-PEPTTPKKPEPT 742
Cdd:PRK07764 618 PAAPAAPAAPAP-AGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPaPAPAAPAAPAGA 696
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 743 TTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTPASEDSDDSkttlkpqkptkapkptkkptkapkkptstkkpktpktr 822
Cdd:PRK07764 697 APAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDP-------------------------------------- 738
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070833 823 kpkttpsplkttsatpelntTPLEVMLPTTTIPKQTPNPETAEVNPDHEDADGGEGEKPLIPGPPVLFPTAIPGTD 898
Cdd:PRK07764 739 --------------------VPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAPSMD 794
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
659-772 |
6.66e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 40.47 E-value: 6.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 659 PEPTTPKEPEPTTP-KKPEPTTPKEPEPTTP---KEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPT 734
Cdd:PRK14951 376 AEKKTPARPEAAAPaAAPVAQAAAAPAPAAApaaAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQA 455
|
90 100 110
....*....|....*....|....*....|....*...
gi 1907070833 735 TPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPE 772
Cdd:PRK14951 456 APETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEE 493
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
691-789 |
6.76e-03 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 40.64 E-value: 6.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 691 PEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKKpeptttspkttTLKATTLAPKVTAPAEeiqnK 770
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPK-----------PAAAAAAAAAPAAPPA----A 102
|
90
....*....|....*....
gi 1907070833 771 PEETTPASEDSDDSKTTLK 789
Cdd:PRK12270 103 AAAAAPAAAAVEDEVTPLR 121
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
539-640 |
6.82e-03 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 39.60 E-value: 6.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 539 PEPTTLKEPEPTTP-KEPEPTTPKEPEPTTLKEPEPTTPkEPEPTTLkePEPTTPKEPEPTTTKEPESTTRKEPEPTTPK 617
Cdd:PRK11633 45 PKPGDRDEPDMMPAaTQALPTQPPEGAAEAVRAGDAAAP-SLDPATV--APPNTPVEPEPAPVEPPKPKPVEKPKPKPKP 121
|
90 100
....*....|....*....|...
gi 1907070833 618 EPEPTTPKEPEPTTPKEPEPTTP 640
Cdd:PRK11633 122 QQKVEAPPAPKPEPKPVVEEKAA 144
|
|
| PRK13042 |
PRK13042 |
superantigen-like protein SSL4; Reviewed; |
422-513 |
6.95e-03 |
|
superantigen-like protein SSL4; Reviewed;
Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 40.00 E-value: 6.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 422 TTPKEPEPTTPKEPEPTTPKEPEPTTlkepeptTPKEPEPTtpkePEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKepE 500
Cdd:PRK13042 23 TTTQAANATTPSSTKVEAPQSTPPST-------KVEAPQSK----PNATTPPSTKVEAPQQtPNATTPSSTKVETPQ--S 89
|
90
....*....|...
gi 1907070833 501 PTTPKEPEPTTPK 513
Cdd:PRK13042 90 PTTKQVPTEINPK 102
|
|
| PRK13108 |
PRK13108 |
prolipoprotein diacylglyceryl transferase; Reviewed |
597-764 |
7.07e-03 |
|
prolipoprotein diacylglyceryl transferase; Reviewed
Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 40.35 E-value: 7.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 597 PTTTKEPESTTRKEPEPTTPKEPEPTT-PKEPEPTTPKEPEPTTPKEP-EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKK 674
Cdd:PRK13108 276 PKGREAPGALRGSEYVVDEALEREPAElAAAAVASAASAVGPVGPGEPnQPDDVAEAVKAEVAEVTDEVAAESVVQVADR 355
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 675 PEPTTPKePEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPE-PTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKA 753
Cdd:PRK13108 356 DGESTPA-VEETSEADIEREQPGDLAGQAPAAHQVDAEAASAaPEEPAALASEAHDETEPEVPEKAAPIPDPAKPDELAV 434
|
170
....*....|.
gi 1907070833 754 TTLAPKVTAPA 764
Cdd:PRK13108 435 AGPGDDPAEPD 445
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
590-658 |
7.08e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 40.44 E-value: 7.08e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 590 TTPKEP-EPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 658
Cdd:PTZ00144 120 TGGAPPaAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRE 189
|
|
| SAV_2336_NTERM |
NF041121 |
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ... |
499-587 |
7.11e-03 |
|
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.
Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 40.37 E-value: 7.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 499 PEPTTPKEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPTTLKEPEPTTPkEPEPTTPKEPEPTtlkEPEPTTP-K 577
Cdd:NF041121 19 AAPPSPEGPAPTAASQPATPPP--PAAPPSPPGDPPEPPAPEPAPLPAPYPGSL-APPPPPPPGPAGA---APGAALPvR 92
|
90
....*....|
gi 1907070833 578 EPEPTTLKEP 587
Cdd:NF041121 93 VPAPPALPNP 102
|
|
| PHA03264 |
PHA03264 |
envelope glycoprotein D; Provisional |
550-655 |
7.12e-03 |
|
envelope glycoprotein D; Provisional
Pssm-ID: 223029 [Multi-domain] Cd Length: 416 Bit Score: 40.37 E-value: 7.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 550 TTPKEPEPTTPKEPEPTTlKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEP 629
Cdd:PHA03264 253 VVPPYFEESKGYEPPPAP-SGGSPAPPGDDRPEAKPEPGPVEDGAPGRETGGEGEGPEPAGRDGAAGGEPKPGPPRPAPD 331
|
90 100
....*....|....*....|....*..
gi 1907070833 630 TTPKEPEPTTPKEP-EPTTPKEPEPTT 655
Cdd:PHA03264 332 ADRPEGWPSLEAITfPPPTPATPAVPR 358
|
|
| PRK13335 |
PRK13335 |
superantigen-like protein SSL3; Reviewed; |
591-697 |
7.12e-03 |
|
superantigen-like protein SSL3; Reviewed;
Pssm-ID: 139494 [Multi-domain] Cd Length: 356 Bit Score: 40.11 E-value: 7.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 591 TPKEPEPTTTKEPESTTRKEpepTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpkEPEPTTPKePEPTTPkePEPT 670
Cdd:PRK13335 68 TRQERTPKLEKAPNTNEEKT---SASKIEKISQPKQEEQKSLNISATPAPKQEQSQT--TTESTTPK-TKVTTP--PSTN 139
|
90 100
....*....|....*....|....*...
gi 1907070833 671 TPKKPEPTTPKEPE-PTTPKEPEPTTPK 697
Cdd:PRK13335 140 TPQPMQSTKSDTPQsPTIKQAQTDMTPK 167
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
643-766 |
7.19e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 40.47 E-value: 7.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 643 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPkkPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPK 721
Cdd:PRK14951 376 AEKKTPARPEAAAPaAAPVAQAAAAPAPAAA--PAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPA 453
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1907070833 722 EPEPTTPKEPEPTTPkkpepTTTSPKTTTLKATTLAPKVTAPAEE 766
Cdd:PRK14951 454 QAAPETVAIPVRVAP-----EPAVASAAPAPAAAPAAARLTPTEE 493
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
405-466 |
7.26e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 40.26 E-value: 7.26e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907070833 405 STTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKE 466
Cdd:TIGR00601 81 TGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| PRK12757 |
PRK12757 |
cell division protein FtsN; Provisional |
471-540 |
7.31e-03 |
|
cell division protein FtsN; Provisional
Pssm-ID: 237191 [Multi-domain] Cd Length: 256 Bit Score: 39.64 E-value: 7.31e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 471 TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 540
Cdd:PRK12757 111 TPQVPRSTVQIQQQAQQQQPPATTAQPQPVTPPRQTTAPVQPQTPAPVRTQPAAPVTQAVEAPKVEAEKE 180
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
676-731 |
7.52e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 40.37 E-value: 7.52e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070833 676 EPTTPKEPEPT---TPKEPEPTTPKEPEPTTPKEPEPTTRkEPEPTTPKEPEPTTPKEP 731
Cdd:COG5373 43 AASAPAEPEPEaaaAATAAAPEAAPAPVPEAPAAPPAAAE-APAPAAAAPPAEAEPAAA 100
|
|
| PRK13335 |
PRK13335 |
superantigen-like protein SSL3; Reviewed; |
546-652 |
7.57e-03 |
|
superantigen-like protein SSL3; Reviewed;
Pssm-ID: 139494 [Multi-domain] Cd Length: 356 Bit Score: 40.11 E-value: 7.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 546 EPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEpEPTTLKEPEPTTPKEPEPTTTkePESTTRKePEPTTPkepePTTPK 625
Cdd:PRK13335 69 RQERTPKLEKAPNTNEEKTSASKIEKISQPKQE-EQKSLNISATPAPKQEQSQTT--TESTTPK-TKVTTP----PSTNT 140
|
90 100
....*....|....*....|....*..
gi 1907070833 626 EPEPTTPKEPEPTTPKEPEPTTPKEPE 652
Cdd:PRK13335 141 PQPMQSTKSDTPQSPTIKQAQTDMTPK 167
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
447-512 |
7.58e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 40.05 E-value: 7.58e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070833 447 TLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPEPTTPKEPEPTTP 512
Cdd:PTZ00144 117 EIDTGGAPPAAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAASK-PTPPAAAKPPEPAPAAKPPPTP 181
|
|
| SAV_2336_NTERM |
NF041121 |
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ... |
587-670 |
7.82e-03 |
|
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.
Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 40.37 E-value: 7.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 587 PEPTTPKEPEPTTTKEPESTtrkePEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 666
Cdd:NF041121 19 AAPPSPEGPAPTAASQPATP----PPPAAP-PSPPGDPPEPPAPEPAPLPAPYPGSLAPPPPPPPGPAGAAPGAALPVRV 93
|
....
gi 1907070833 667 PEPT 670
Cdd:NF041121 94 PAPP 97
|
|
| SAV_2336_NTERM |
NF041121 |
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ... |
667-736 |
7.82e-03 |
|
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.
Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 40.37 E-value: 7.82e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 667 PEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRkePEPTTPkEPEPTTPKEPEPTTP 736
Cdd:NF041121 19 AAPPSPEGPAPTAASQPATPPPPAAPPSPPGDPPEPPAPEPAPLPA--PYPGSL-APPPPPPPGPAGAAP 85
|
|
| PRK01297 |
PRK01297 |
ATP-dependent RNA helicase RhlB; Provisional |
477-551 |
7.84e-03 |
|
ATP-dependent RNA helicase RhlB; Provisional
Pssm-ID: 234938 [Multi-domain] Cd Length: 475 Bit Score: 40.28 E-value: 7.84e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1907070833 477 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTT 551
Cdd:PRK01297 13 EAEQPAPAPPSPAAAPAPPPPAKTAAPATKAAAPAAAAPRAEKPKKDKPRRERKPKPASLWKLEDFVVEPQEGKT 87
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
369-536 |
7.84e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 40.24 E-value: 7.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 369 KKPEPTTPKEPEPTTPKEPEPTTTKEPEPTTTKEPESTTRKEPEPTtpKEPEPTTPKEPEPTTP---KEPEPTTPKEPEP 445
Cdd:PRK12323 402 PPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGA--PAPAPAPAAAPAAAARpaaAGPRPVAAAAAAA 479
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 446 TTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEP--TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 523
Cdd:PRK12323 480 PARAAPAAAPAPADDDPPPWEELPPEFASPAPaqPDAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEP 559
|
170
....*....|....*
gi 1907070833 524 E--PTTPKEPEPTTP 536
Cdd:PRK12323 560 VvaPRPPRASASGLP 574
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
443-542 |
7.88e-03 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 39.22 E-value: 7.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 443 PEPTTLKEPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 521
Cdd:PRK11633 45 PKPGDRDEPDMMPAaTQALPTQPPEGAAEAVRAGDAAAP-SLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQ 123
|
90 100
....*....|....*....|...
gi 1907070833 522 EPE-PTTPK-EPEPTTPKEPEPT 542
Cdd:PRK11633 124 KVEaPPAPKpEPKPVVEEKAAPT 146
|
|
| PHA03169 |
PHA03169 |
hypothetical protein; Provisional |
457-665 |
7.92e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 39.95 E-value: 7.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 457 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK--EPEPTTPKEPEPT 534
Cdd:PHA03169 44 AKPAPPAPTTSGPQVRAVAEQGHRQTESDTETAEESRHGEKEERGQGGPSGSGSESVGSPTPSPSgsAEELASGLSPENT 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 535 TPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTlKEPEPTTPKEPEPTTLKEPEPTTPKEPEPtttkEPESTTRKEPEPT 614
Cdd:PHA03169 124 SGSSPESPASHSPPPSPPSHPGPHEPAPPESHN-PSPNQQPSSFLQPSHEDSPEEPEPPTSEP----EPDSPGPPQSETP 198
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 1907070833 615 TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 665
Cdd:PHA03169 199 TSSPPPQSPPDEPGEPQSPTPQQAPSPNTQQAVEHEDEPTEPEREGPPFPG 249
|
|
| ZipA |
COG3115 |
Cell division protein ZipA, interacts with FtsZ [Cell cycle control, cell division, chromosome ... |
545-654 |
8.16e-03 |
|
Cell division protein ZipA, interacts with FtsZ [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442349 [Multi-domain] Cd Length: 298 Bit Score: 39.68 E-value: 8.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 545 KEPEPTTPKEPEPTTPKEPEPTTlKEPEPTTPkEPEpttLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTP 624
Cdd:COG3115 54 RVVAAEAPERVEPEASFDAEDEV-REPDQEEV-DPL---LDDEADIEAAPAEPVRWAGTAAAVEPAPEQEAYEEAGPAGE 128
|
90 100 110
....*....|....*....|....*....|
gi 1907070833 625 kEPEPTTPKEPEPTTPKEPEPTTPKEPEPT 654
Cdd:COG3115 129 -SAEQEDAPAEEPEAEAPAEEALAAELCAE 157
|
|
| PRK14949 |
PRK14949 |
DNA polymerase III subunits gamma and tau; Provisional |
536-691 |
8.42e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237863 [Multi-domain] Cd Length: 944 Bit Score: 40.48 E-value: 8.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 536 PKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTT 615
Cdd:PRK14949 637 KKSSADRKPKTPPSRAPPASLSKPASSPDASQTSASFDLDPDFELATHQSVPEAALASGSAPAPPPVPDPYDRPPWEEAP 716
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070833 616 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpkEPEPTtpkePEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEP 691
Cdd:PRK14949 717 EVASANDGPNNAAEGNLSESVEDASNSELQAV--EQQAT----HQPQVQAEAQSPASTTALTQTSSEVQDTELNLV 786
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
475-550 |
8.48e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 40.05 E-value: 8.48e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070833 475 PEPTTPKEPEPTTPKePEPTTPKEPEPTTPKEPEPTTPkepeptTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPT 550
Cdd:PTZ00144 122 GAPPAAAPAAAAAAK-AEKTTPEKPKAAAPTPEPPAAS------KPTPPAAAKPPEPAPAAKPPPTPVARADPRET 190
|
|
| PRK13042 |
PRK13042 |
superantigen-like protein SSL4; Reviewed; |
405-497 |
8.73e-03 |
|
superantigen-like protein SSL4; Reviewed;
Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 39.62 E-value: 8.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 405 STTRKEPEPTTPKEPEPTTPKEPEPTT-PKEPEPTtpkepepttlkePEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKe 482
Cdd:PRK13042 22 TTTTQAANATTPSSTKVEAPQSTPPSTkVEAPQSK------------PNATTPPSTKVEAPQQtPNATTPSSTKVETPQ- 88
|
90
....*....|....*
gi 1907070833 483 pEPTTPKEPEPTTPK 497
Cdd:PRK13042 89 -SPTTKQVPTEINPK 102
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
438-506 |
8.85e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 40.05 E-value: 8.85e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 438 TTPKEPEPTTLKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 506
Cdd:PTZ00144 120 TGGAPPAAAPAAAAAAKAEKtTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRE 189
|
|
| ZipA |
COG3115 |
Cell division protein ZipA, interacts with FtsZ [Cell cycle control, cell division, chromosome ... |
416-518 |
8.99e-03 |
|
Cell division protein ZipA, interacts with FtsZ [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442349 [Multi-domain] Cd Length: 298 Bit Score: 39.68 E-value: 8.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 416 PKEPEPTTPKEPEPTTPKEPEPTTP--KEPEPTtLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkEPEP 493
Cdd:COG3115 55 VVAAEAPERVEPEASFDAEDEVREPdqEEVDPL-LDDEADIEAAPAEPVRWAGTAAAVEPAPEQEAYEEAGPAGE-SAEQ 132
|
90 100
....*....|....*....|....*
gi 1907070833 494 TTPKEPEPTTPKEPEPTTPKEPEPT 518
Cdd:COG3115 133 EDAPAEEPEAEAPAEEALAAELCAE 157
|
|
| PRK10905 |
PRK10905 |
cell division protein DamX; Validated |
590-720 |
9.08e-03 |
|
cell division protein DamX; Validated
Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 39.54 E-value: 9.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 590 TTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPepTTPKEPEPTTPKEPEPTTPKEPEP--TTPKEPEpttpkEP 667
Cdd:PRK10905 106 TQPQNQQQLNNVAVNSTLPTEPATVAPVRNGNASRQTA--KTQTAERPATTRPARKQAVIEPKKpqATAKTEP-----KP 178
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 1907070833 668 EPTTPKKPEPTTPKEPepttPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTP 720
Cdd:PRK10905 179 VAQTPKRTEPAAPVAS----TKAPAATSTPAPKETATTAPVQTASPAQTTATP 227
|
|
| PHA03169 |
PHA03169 |
hypothetical protein; Provisional |
410-537 |
9.09e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 39.95 E-value: 9.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 410 EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTlKEPEPTTPKEPEPTTPKEPEPTTP--KEPEPTTPKEPEPTT 487
Cdd:PHA03169 119 SPENTSGSSPESPASHSPPPSPPSHPGPHEPAPPESHN-PSPNQQPSSFLQPSHEDSPEEPEPptSEPEPDSPGPPQSET 197
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 1907070833 488 PKEPEPTTPKEPEPTTPKEPEPTTPKEPE--PTTPKEPEPTTPKEPEPTTPK 537
Cdd:PHA03169 198 PTSSPPPQSPPDEPGEPQSPTPQQAPSPNtqQAVEHEDEPTEPEREGPPFPG 249
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
518-578 |
9.25e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 39.88 E-value: 9.25e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070833 518 TTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKE 578
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| SAV_2336_NTERM |
NF041121 |
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ... |
619-693 |
9.28e-03 |
|
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.
Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 39.99 E-value: 9.28e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1907070833 619 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkkpEPTTPKEPEPTTPKEPEP 693
Cdd:NF041121 19 AAPPSPEGPAPTAASQPATPPPPAAPPSPPGDPPEPPAPEPAPLPAPYPGSLAP---PPPPPPGPAGAAPGAALP 90
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
601-659 |
9.37e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 40.37 E-value: 9.37e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907070833 601 KEPESTTRKEPEPT---TPKEPEPTTPKEPEPTTPKEPePTTPKEPEPTTPKEPEPTTPKEP 659
Cdd:COG5373 40 AAEAASAPAEPEPEaaaAATAAAPEAAPAPVPEAPAAP-PAAAEAPAPAAAAPPAEAEPAAA 100
|
|
| PRK13335 |
PRK13335 |
superantigen-like protein SSL3; Reviewed; |
599-721 |
9.49e-03 |
|
superantigen-like protein SSL3; Reviewed;
Pssm-ID: 139494 [Multi-domain] Cd Length: 356 Bit Score: 39.72 E-value: 9.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 599 TTKEPESTTRKEPEPTTPKEPEPTTPKEpepTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpkEPEPTTPKkPEPT 678
Cdd:PRK13335 60 SATTQAANTRQERTPKLEKAPNTNEEKT---SASKIEKISQPKQEEQKSLNISATPAPKQEQSQT--TTESTTPK-TKVT 133
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 1907070833 679 TPkePEPTTPKEPEPTTPKEPEpttpkepEPTTRKEPEPTTPK 721
Cdd:PRK13335 134 TP--PSTNTPQPMQSTKSDTPQ-------SPTIKQAQTDMTPK 167
|
|
| PRK13042 |
PRK13042 |
superantigen-like protein SSL4; Reviewed; |
486-577 |
9.53e-03 |
|
superantigen-like protein SSL4; Reviewed;
Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 39.62 E-value: 9.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 486 TTPKEPEPTTPKEPEPTTPKEPEPTT-PKEPEPTtpkePEPTTPKEPEPTTPKEpepttlkEPEPTTPKEPEPTTPKepE 564
Cdd:PRK13042 23 TTTQAANATTPSSTKVEAPQSTPPSTkVEAPQSK----PNATTPPSTKVEAPQQ-------TPNATTPSSTKVETPQ--S 89
|
90
....*....|...
gi 1907070833 565 PTTLKEPEPTTPK 577
Cdd:PRK13042 90 PTTKQVPTEINPK 102
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
637-780 |
9.54e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 40.24 E-value: 9.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 637 PTTPKEPEPTTPKEPEPTTPKEPEPTTPkepEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPE 716
Cdd:PRK12323 375 ATAAAAPVAQPAPAAAAPAAAAPAPAAP---PAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPA 451
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907070833 717 PTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTPASED 780
Cdd:PRK12323 452 PAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPD 515
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
534-594 |
9.57e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 39.88 E-value: 9.57e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070833 534 TTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKE 594
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| PRK13335 |
PRK13335 |
superantigen-like protein SSL3; Reviewed; |
455-553 |
9.65e-03 |
|
superantigen-like protein SSL3; Reviewed;
Pssm-ID: 139494 [Multi-domain] Cd Length: 356 Bit Score: 39.72 E-value: 9.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 455 TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpkEPEPTTPKePEPTTPkePEPTTPKEPEPT 534
Cdd:PRK13335 73 TPKLEKAPNTNEEKTSASKIEKISQPKQEEQKSLNISATPAPKQEQSQT--TTESTTPK-TKVTTP--PSTNTPQPMQST 147
|
90 100
....*....|....*....|
gi 1907070833 535 TPKEPEPTTLKEPEP-TTPK 553
Cdd:PRK13335 148 KSDTPQSPTIKQAQTdMTPK 167
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
521-579 |
9.69e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 39.98 E-value: 9.69e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907070833 521 KEPEPTTPKEPEPT---TPKEPEPTTLKEPEPTTPKEPePTTPKEPEPTTLKEPEPTTPKEP 579
Cdd:COG5373 40 AAEAASAPAEPEPEaaaAATAAAPEAAPAPVPEAPAAP-PAAAEAPAPAAAAPPAEAEPAAA 100
|
|
| PRK13042 |
PRK13042 |
superantigen-like protein SSL4; Reviewed; |
470-553 |
9.88e-03 |
|
superantigen-like protein SSL4; Reviewed;
Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 39.62 E-value: 9.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070833 470 TTPKEPEPTTPKEPEPTTPKEPEPTTpkepEPTTPKE-PEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKepEPTTLKEP 547
Cdd:PRK13042 23 TTTQAANATTPSSTKVEAPQSTPPST----KVEAPQSkPNATTPPSTKVEAPQQtPNATTPSSTKVETPQ--SPTTKQVP 96
|
....*.
gi 1907070833 548 EPTTPK 553
Cdd:PRK13042 97 TEINPK 102
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
450-514 |
9.90e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 39.67 E-value: 9.90e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070833 450 EPEPTTPKEPE--PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 514
Cdd:PTZ00144 123 APPAAAPAAAAaaKAEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRE 189
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
419-490 |
9.90e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 39.67 E-value: 9.90e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907070833 419 PEPTTPKEPEPTTPKEPEPTTPKEPEPttlkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 490
Cdd:PTZ00144 122 GAPPAAAPAAAAAAKAEKTTPEKPKAA----APTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRE 189
|
|
| |
