|
Name |
Accession |
Description |
Interval |
E-value |
| HX |
cd00094 |
Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. ... |
879-1140 |
2.54e-39 |
|
Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metalloproteinases (TIMPs). This CD contains 4 instances of the repeat.
Pssm-ID: 238046 [Multi-domain] Cd Length: 194 Bit Score: 144.76 E-value: 2.54e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 879 TNLCNGKPVDGLTTLRnGTLVAFRGHYFWMLNPFRPPSPPRRITEVW-GIPSPIDTVFTRCNcEGKTFFFKDSQYWRFTN 957
Cdd:cd00094 1 PDACDPLSFDAVTTLR-GELYFFKGRYFWRLSPGKPPGSPFLISSFWpSLPSPVDAAFERPD-TGKIYFFKGDKYWVYTG 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 958 DVVDPGYPKQIVK-GFGGLTGKIVAALSIAkykdRPESVYFFKrGGNIQQYTYKQEPMKKCTGRRPAinysvygeaaqvr 1036
Cdd:cd00094 79 KNLEPGYPKPISDlGFPPTVKQIDAALRWP----DNGKTYFFK-GDKYWRYDEKTQKMDPGYPKLIE------------- 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 1037 rrrferavgpfqthtfrihysvpmrvsyqdkgflhnevkvsTMWRGFPNVVTSAitlpnIRKPDGYdYYAFSKDQYYNID 1116
Cdd:cd00094 141 -----------------------------------------TDFPGVPDKVDAA-----FRWLDGY-YYFFKGDQYWRFD 173
|
250 260
....*....|....*....|....
gi 1907070839 1117 VPTRTARAITTRSGqtlSKIWYNC 1140
Cdd:cd00094 174 PRSKEVRVGYPLKI---SSDWLGC 194
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
573-689 |
1.17e-20 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 88.96 E-value: 1.17e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 573 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEP 652
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907070839 653 EPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTP 689
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
581-697 |
1.33e-20 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 88.96 E-value: 1.33e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 581 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEP 660
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907070839 661 EPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTP 697
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
572-681 |
1.39e-19 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 86.26 E-value: 1.39e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 572 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKE 651
Cdd:pfam02389 14 QEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVPEPCHPKA 93
|
90 100 110
....*....|....*....|....*....|
gi 1907070839 652 PEPTTPKEPEPTTPKEPEPTTRKEPEPTTP 681
Cdd:pfam02389 94 PEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
549-665 |
1.58e-19 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 85.88 E-value: 1.58e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 549 EPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 628
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907070839 629 EPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 665
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
452-875 |
3.94e-19 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 94.23 E-value: 3.94e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 452 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTP----KEPEPTTlkEPEPTTPKEP--EPTTLKEPEPTTPKEPEPTTPKEPE 525
Cdd:PHA03247 2551 PPPPLPPAAPPAAPDRSVPPPRPAPRPSEPavtsRARRPDA--PPQSARPRAPvdDRGDPRGPAPPSPLPPDTHAPDPPP 2628
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 526 PTtlkePEPTTPKEPEPTTLKEPEPTTPKE-PEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTT--------PKEP 596
Cdd:PHA03247 2629 PS----PSPAANEPDPHPPPTVPPPERPRDdPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVgsltsladPPPP 2704
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 597 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKkPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTtrkeP 676
Cdd:PHA03247 2705 PPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPP-AVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAG----P 2779
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 677 EPTTPKEP----EPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTPASEDSDDSKTTLKPq 752
Cdd:PHA03247 2780 PRRLTRPAvaslSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAP- 2858
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 753 kptkapkptkkptkapKKPTSTKKPKTPKTRKPKTTPSPLKTTSATPELNTTPLEVMLPTTTIPKQtPNPETAEVNPDHE 832
Cdd:PHA03247 2859 ----------------GGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERP-PQPQAPPPPQPQP 2921
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 1907070839 833 DADGGEGEKPLIPGPPVLFPTAIPGTDLLAGRLNQGININPML 875
Cdd:PHA03247 2922 QPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWL 2964
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
541-657 |
7.08e-19 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 83.95 E-value: 7.08e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 541 EPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 620
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907070839 621 EPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTP 657
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
509-625 |
2.78e-18 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 82.41 E-value: 2.78e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 509 EPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEP 588
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907070839 589 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 625
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
525-641 |
3.90e-18 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 82.02 E-value: 3.90e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 525 EPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 604
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907070839 605 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTP 641
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
452-739 |
6.96e-18 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 90.00 E-value: 6.96e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 452 PEPTTPKEP--EPTTPKEPEPTTPKEPEPTTPKEPEPTtlKEPEPTTPKEPEPTTLKEPE-------------------- 509
Cdd:PHA03247 2593 PQSARPRAPvdDRGDPRGPAPPSPLPPDTHAPDPPPPS--PSPAANEPDPHPPPTVPPPErprddpapgrvsrprrarrl 2670
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 510 -----PTTPKE--------------------PEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPE-PTTTKE 563
Cdd:PHA03247 2671 graaqASSPPQrprrraarptvgsltsladpPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAvPAGPAT 2750
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 564 PESTTRKEPEPTTPKEPEPTTPKEP----------------EPTTPKEPEPTTPK----------------------EPE 605
Cdd:PHA03247 2751 PGGPARPARPPTTAGPPAPAPPAAPaagpprrltrpavaslSESRESLPSPWDPAdppaavlapaaalppaaspagpLPP 2830
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 606 PTTPKEPEPTTPKEPEPTT--------------------PKEPEPTTPKKP------EPTTPKEPEPTTPKEPEPTTPKE 659
Cdd:PHA03247 2831 PTSAQPTAPPPPPGPPPPSlplggsvapggdvrrrppsrSPAAKPAAPARPpvrrlaRPAVSRSTESFALPPDQPERPPQ 2910
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 660 PEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEI-QNKPEETTPA 738
Cdd:PHA03247 2911 PQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVpQPAPSREAPA 2990
|
.
gi 1907070839 739 S 739
Cdd:PHA03247 2991 S 2991
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
453-565 |
1.41e-17 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 80.48 E-value: 1.41e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 453 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEP 532
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|...
gi 1907070839 533 EPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPE 565
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPE 119
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
452-558 |
2.73e-17 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 79.33 E-value: 2.73e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 452 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKE 531
Cdd:pfam02389 14 QEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVPEPCHPKA 93
|
90 100
....*....|....*....|....*..
gi 1907070839 532 PEPTTPKEPEPTTLKEPEPTTPKEPEP 558
Cdd:pfam02389 94 PEPCHPKVPEPCYPKAPEPCQPKVPEP 120
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
493-609 |
2.92e-17 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 79.33 E-value: 2.92e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 493 EPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEP 572
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907070839 573 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 609
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
501-617 |
3.28e-17 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 79.33 E-value: 3.28e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 501 EPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEP 580
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907070839 581 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 617
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| Somatomedin_B |
pfam01033 |
Somatomedin B domain; |
69-106 |
5.18e-17 |
|
Somatomedin B domain;
Pssm-ID: 460034 Cd Length: 40 Bit Score: 75.42 E-value: 5.18e-17
10 20 30
....*....|....*....|....*....|....*...
gi 1907070839 69 SCKGRCFESFARGRECDCDSQCKQYGKCCADYDSFCEE 106
Cdd:pfam01033 2 SCKGRCGESFDRGRLCQCDDDCVKYGDCCPDYESLCLG 39
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
469-585 |
1.01e-16 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 77.79 E-value: 1.01e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 469 EPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEP 548
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907070839 549 EPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTP 585
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| SO |
smart00201 |
Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from ... |
26-68 |
1.37e-16 |
|
Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from vitronectin, that is a growth hormone-dependent serum factor with protease-inhibiting activity.
Pssm-ID: 197571 Cd Length: 43 Bit Score: 74.33 E-value: 1.37e-16
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 1907070839 26 DLSSCAGRCGEGYSRDATCNCDYNCQHYMECCPDFKRVCTTEL 68
Cdd:smart00201 1 AIGSCKGRCGESFNEGNACRCDALCLSYGDCCTDYESVCKKEV 43
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
485-601 |
2.37e-16 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 77.02 E-value: 2.37e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 485 EPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEP 564
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907070839 565 ESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 601
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
449-696 |
5.40e-16 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 82.51 E-value: 5.40e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 449 RKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEpTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTT 528
Cdd:NF033839 276 KKGLTQDTPKEPGNKKPSAPKPGMQPSPQPEKKEVKPEPETPKPE-VKPQLEKPKPEVKPQPEKPKPEVKPQLETPKPEV 354
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 529 LKEPEPTTPK-EPEPTTLKEPEPTTPKEPEPTTTKEPESTTRK-EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP-KEPE 605
Cdd:NF033839 355 KPQPEKPKPEvKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPEvKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPeVKPQ 434
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 606 PTTPK---EPEPTTPK---EPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPtTPKEPEPTTPKEPEPTTRKEPEPT 679
Cdd:NF033839 435 PEKPKpevKPQPEKPKpevKPQPETPKPEVKPQPEKPKPEVKPQPEKPKPDNSKP-QADDKKPSTPNNLSKDKQPSNQAS 513
|
250
....*....|....*..
gi 1907070839 680 TpKEPEPTTPKEPEPTT 696
Cdd:NF033839 514 T-NEKATNKPKKSLPST 529
|
|
| SO |
smart00201 |
Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from ... |
67-108 |
5.41e-16 |
|
Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from vitronectin, that is a growth hormone-dependent serum factor with protease-inhibiting activity.
Pssm-ID: 197571 Cd Length: 43 Bit Score: 72.79 E-value: 5.41e-16
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 1907070839 67 ELSCKGRCFESFARGRECDCDSQCKQYGKCCADYDSFCEEVH 108
Cdd:smart00201 2 IGSCKGRCGESFNEGNACRCDALCLSYGDCCTDYESVCKKEV 43
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
474-697 |
1.60e-15 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 80.97 E-value: 1.60e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 474 KEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEpTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTP 553
Cdd:NF033839 277 KGLTQDTPKEPGNKKPSAPKPGMQPSPQPEKKEVKPEPETPKPE-VKPQLEKPKPEVKPQPEKPKPEVKPQLETPKPEVK 355
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 554 KEPEpttTKEPESttrkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 632
Cdd:NF033839 356 PQPE---KPKPEV----KPQPEKPKPEVKPQPETPKPEVKPQPEKPKPEvKPQPEKPKPEVKPQPEKPKPEVKPQPEKPK 428
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907070839 633 P-KKPEPTTPK---EPEPTTPK---EPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPtTPKEPEPTTP 697
Cdd:NF033839 429 PeVKPQPEKPKpevKPQPEKPKpevKPQPETPKPEVKPQPEKPKPEVKPQPEKPKPDNSKP-QADDKKPSTP 499
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
446-699 |
2.58e-15 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 81.27 E-value: 2.58e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 446 STTRKEPEPTTPKEPEPTTPKEP-EPTTPKEPEPTTPKEPE--PTTLKEPE-PTTPKEP-EPTTLKEPE-PTTPKEP-EP 518
Cdd:PTZ00449 530 EEGEHEDSKESDEPKEGGKPGETkEGEVGKKPGPAKEHKPSkiPTLSKKPEfPKDPKHPkDPEEPKKPKrPRSAQRPtRP 609
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 519 TTPKEPE----PTTLKEPE-PTTPKEPEPTTlkepEPTTPKEPE-PTTTKEPESTTRKEPePTTPKEPE----------P 582
Cdd:PTZ00449 610 KSPKLPElldiPKSPKRPEsPKSPKRPPPPQ----RPSSPERPEgPKIIKSPKPPKSPKP-PFDPKFKEkfyddyldaaA 684
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 583 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPePTTPKEPEPTTPKEPEP--TTPKKPEPTTPKEPEPTTPKEPEPTTPKEP 660
Cdd:PTZ00449 685 KSKETKTTVVLDESFESILKETLPETPGTP-FTTPRPLPPKLPRDEEFpfEPIGDPDAEQPDDIEFFTPPEEERTFFHET 763
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 1907070839 661 EPTTP---------KEPEPTTR-KEPE-----PTTPKEPEPTTPKEpEPTTPKK 699
Cdd:PTZ00449 764 PADTPlpdilaeefKEEDIHAEtGEPDeamkrPDSPSEHEDKPPGD-HPSLPKK 816
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
458-577 |
3.02e-15 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 73.55 E-value: 3.02e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 458 KEPEPTTPkePEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTP 537
Cdd:pfam02389 6 KQPCQPPP--QEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSP 83
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1907070839 538 KEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTP 577
Cdd:pfam02389 84 KVPEPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| Somatomedin_B |
pfam01033 |
Somatomedin B domain; |
29-67 |
3.21e-15 |
|
Somatomedin B domain;
Pssm-ID: 460034 Cd Length: 40 Bit Score: 70.41 E-value: 3.21e-15
10 20 30
....*....|....*....|....*....|....*....
gi 1907070839 29 SCAGRCGEGYSRDATCNCDYNCQHYMECCPDFKRVCTTE 67
Cdd:pfam01033 2 SCKGRCGESFDRGRLCQCDDDCVKYGDCCPDYESLCLGE 40
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
450-542 |
3.74e-15 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 73.55 E-value: 3.74e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 450 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTL 529
Cdd:pfam02389 28 KVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVPEPCHPKAPEPCHPKVPEPCYP 107
|
90
....*....|...
gi 1907070839 530 KEPEPTTPKEPEP 542
Cdd:pfam02389 108 KAPEPCQPKVPEP 120
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
446-733 |
1.77e-13 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 74.81 E-value: 1.77e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 446 STTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTP------------------KEPEPTTLKE 507
Cdd:NF033839 153 SGSSTKPETPQPENPEHQKPTTPAPDTKPSPQPEGKKPSVPDINQEKEKAKLavatymskilddiqkhhlQKEKHRQIVA 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 508 PEPTTPKEPEPTTPKEPEPTTLKEPEPTTPK---EPEPTTLKEPEPTTPKEPEPTTTKEPES-TTRKEPEPTTPKEPEPT 583
Cdd:NF033839 233 LIKELDELKKQALSEIDNVNTKVEIENTVHKifaDMDAVVTKFKKGLTQDTPKEPGNKKPSApKPGMQPSPQPEKKEVKP 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 584 TPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK-KPEPTTPK---EPEPTTPK---EPEPT 655
Cdd:NF033839 313 EPETPKPEVKPQLEKPKPEvKPQPEKPKPEVKPQLETPKPEVKPQPEKPKPEvKPQPEKPKpevKPQPETPKpevKPQPE 392
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 656 TPKEPEPTTPKEPEPTTRKEPEPTTPK-EPEPTTPKE---PEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNK 731
Cdd:NF033839 393 KPKPEVKPQPEKPKPEVKPQPEKPKPEvKPQPEKPKPevkPQPEKPKPEVKPQPEKPKPEVKPQPETPKPEVKPQPEKPK 472
|
..
gi 1907070839 732 PE 733
Cdd:NF033839 473 PE 474
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
236-689 |
2.80e-12 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 71.51 E-value: 2.80e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 236 PttphskvttspkttAAKPVTPKPSLAPNSETSKEASLASNKETTVETKETTATNKQSSASKKKTTSAKETRSAEKTSDK 315
Cdd:PHA03247 2557 P--------------AAPPAAPDRSVPPPRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTH 2622
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 316 DVEPTSTTPKNSAPTTTKKPVTTTKEPVPTTPKEPEPTTPKEPPPTTKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 395
Cdd:PHA03247 2623 APDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPP 2702
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 396 EPEPTTPKEPPPTTKKPEPTTPKEPEPTTPKEPEPTTTKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKE 475
Cdd:PHA03247 2703 PPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRR 2782
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 476 PEPTTPKEPEPTTLKEPEPTTPKEPePTTLKEPEPTTPKEPEPTTPkEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKE 555
Cdd:PHA03247 2783 LTRPAVASLSESRESLPSPWDPADP-PAAVLAPAAALPPAASPAGP-LPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGG 2860
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 556 P---EPTTTKEPesttrkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE-PTTPKEPEPTTPKEPEPTTPKePEPT 631
Cdd:PHA03247 2861 DvrrRPPSRSPA-------AKPAAPARPPVRRLARPAVSRSTESFALPPDQPErPPQPQAPPPPQPQPQPPPPPQ-PQPP 2932
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907070839 632 TPKKPEPTTPKEPEPTTPKEPEPtTPKEPEP----TTPKEPEPTTRKEPEPTTPKE-PEPTTP 689
Cdd:PHA03247 2933 PPPPPRPQPPLAPTTDPAGAGEP-SGAVPQPwlgaLVPGRVAVPRFRVPQPAPSREaPASSTP 2994
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
474-698 |
3.15e-12 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 71.26 E-value: 3.15e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 474 KEPEPTTPKEPEPTTLKEPEPttPKEPEPTTLKepePTTPKEPEPTTP-KEPEPTTLKEPEPTTPKEP-EPTTLKEPEPT 551
Cdd:PTZ00449 490 KKSKKKLAPIEEEDSDKHDEP--PEGPEASGLP---PKAPGDKEGEEGeHEDSKESDEPKEGGKPGETkEGEVGKKPGPA 564
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 552 TPKEPE--PTTTKEPESttrkepePTTPKEP-EPTTPKEPE-PTTPKEP-EPTTPKEPE----PTTPKEPE-PTTPKEPE 621
Cdd:PTZ00449 565 KEHKPSkiPTLSKKPEF-------PKDPKHPkDPEEPKKPKrPRSAQRPtRPKSPKLPElldiPKSPKRPEsPKSPKRPP 637
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 622 PTTpkepEPTTPKKPE-PTTPKEPEPttPKEPEP-----------------------------------TTPKEPEPTTP 665
Cdd:PTZ00449 638 PPQ----RPSSPERPEgPKIIKSPKP--PKSPKPpfdpkfkekfyddyldaaaksketkttvvldesfeSILKETLPETP 711
|
250 260 270
....*....|....*....|....*....|...
gi 1907070839 666 KEPEPTTRKEPePTTPKEPEPTTPKEPEPTTPK 698
Cdd:PTZ00449 712 GTPFTTPRPLP-PKLPRDEEFPFEPIGDPDAEQ 743
|
|
| HX |
smart00120 |
Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. ... |
931-975 |
3.33e-12 |
|
Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metalloproteinases (TIMPs).
Pssm-ID: 214524 [Multi-domain] Cd Length: 45 Bit Score: 61.87 E-value: 3.33e-12
10 20 30 40
....*....|....*....|....*....|....*....|....*
gi 1907070839 931 IDTVFTRCNceGKTFFFKDSQYWRFTNDVVDPGYPKQIVKGFGGL 975
Cdd:smart00120 1 IDAAFELRD--GKTYFFKGDKYWRFDPKRVDPGYPKLISSFFPGL 43
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
450-773 |
4.24e-12 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 70.87 E-value: 4.24e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 450 KEPEPTTPKEPE--PTTPKEPE-PTTPKEP-EPTTPKEPE-PTTLKEP-EPTTPKEPEPTTLkepePTTPKEPE-PTTPK 522
Cdd:PTZ00449 559 KKPGPAKEHKPSkiPTLSKKPEfPKDPKHPkDPEEPKKPKrPRSAQRPtRPKSPKLPELLDI----PKSPKRPEsPKSPK 634
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 523 EPEPTTlkepEPTTPKEPE-PTTLKEPE-PTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 600
Cdd:PTZ00449 635 RPPPPQ----RPSSPERPEgPKIIKSPKpPKSPKPPFDPKFKEKFYDDYLDAAAKSKETKTTVVLDESFESILKETLPET 710
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 601 PKEPePTTPKEPEPTTPKEPEPT--TPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTP---------KEPEPTT-PKEP 668
Cdd:PTZ00449 711 PGTP-FTTPRPLPPKLPRDEEFPfePIGDPDAEQPDDIEFFTPPEEERTFFHETPADTPlpdilaeefKEEDIHAeTGEP 789
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 669 EPTTRKepePTTPKEPEPTTPKEpEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEI---------------QNKPE 733
Cdd:PTZ00449 790 DEAMKR---PDSPSEHEDKPPGD-HPSLPKKRHRLDGLALSTTDLESDAGRIAKDASGKIvklkrsksfddlttvEEAEE 865
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 1907070839 734 ETTPASE----------DSDDSKTTLKPQKPTKAPKPTKKPTKAPKKPTS 773
Cdd:PTZ00449 866 MGAEARKivvdddgteaDDEDTHPPEEKHKSEVRRRRPPKKPSKPKKPSK 915
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
509-697 |
2.14e-11 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 68.57 E-value: 2.14e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 509 EPTTPKEPEPTTPKEP-EPTTLKEPEPTtPKEPEPTTLKEPEPTTPkEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKE 587
Cdd:PRK10263 338 EPVTQTPPVASVDVPPaQPTVAWQPVPG-PQTGEPVIAPAPEGYPQ-QSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQP 415
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 588 PE----PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPttPKEPEPT---TPKKPEPTTPKEPE-PTTPKEPEPTTPKE 659
Cdd:PRK10263 416 AQqpyyAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQS--TFAPQSTyqtEQTYQQPAAQEPLYqQPQPVEQQPVVEPE 493
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1907070839 660 P--EPTTPKEP---------EPTTRKEPEPTTPKEPEPTTPKEPEPTTP 697
Cdd:PRK10263 494 PvvEETKPARPplyyfeeveEKRAREREQLAAWYQPIPEPVKEPEPIKS 542
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
457-738 |
6.77e-11 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 66.63 E-value: 6.77e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 457 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTT 536
Cdd:PHA03378 571 PLQIQPLTSPTTSQLASSAPSYAQTPWPVPHPSQTPEPPTTQSHIPETSAPRQWPMPLRPIPMRPLRMQPITFNVLVFPT 650
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 537 PKEP---EPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPepttPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 613
Cdd:PHA03378 651 PHQPpqvEITPYKPTWTQIGHIPYQPSPTGANTMLPIQWAPGTMQPP----PRAPTPMRPPAAPPGRAQRPAAATGRARP 726
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 614 PTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPT-TPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEP 692
Cdd:PHA03378 727 PAAAPGRARPPAAAPGRARPPAAAPGRARPPAAApGRARPPAAAPGAPTPQPPPQAPPAPQQRPRGAPTPQPPPQAGPTS 806
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 1907070839 693 EPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTPA 738
Cdd:PHA03378 807 MQLMPRAAPGQQGPTKQILRQLLTGGVKRGRPSLKKPAALERQAAA 852
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
465-697 |
1.10e-10 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 65.72 E-value: 1.10e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 465 PKEPEPTTPKEPEPTTPKEPEPTTLKEPEptTPKEPEPTTLKEPEPTTPKEP-EPTTPKEPEPTTLKEPEPTtpkePEPT 543
Cdd:PLN03209 330 PKESDAADGPKPVPTKPVTPEAPSPPIEE--EPPQPKAVVPRPLSPYTAYEDlKPPTSPIPTPPSSSPASSK----SVDA 403
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 544 TLKEPEPTTPKEPEPTTT---KEPESTTRKEPEPTTP--KEPEPTTPKEPEPTTPKEPEPTTPKepEPTTPKEPEPTTPK 618
Cdd:PLN03209 404 VAKPAEPDVVPSPGSASNvpeVEPAQVEAKKTRPLSPyaRYEDLKPPTSPSPTAPTGVSPSVSS--TSSVPAVPDTAPAT 481
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070839 619 EPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKepEPTTRKEPEPTTPKEPEPTTPKEPEPTTP 697
Cdd:PLN03209 482 AATDAAAPPPANMRPLSPYAVYDDLKPPTSP-SPAAPVGKVAPSSTNE--VVKVGNSAPPTALADEQHHAQPKPRPLSP 557
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
452-630 |
4.10e-10 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 63.83 E-value: 4.10e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 452 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTlkEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKE 531
Cdd:PRK14948 366 SEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAAT--TPSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLNLEE 443
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 532 ---------PEPTT-------------------------------PKEPEPTT---------------LKEPEPTTPKEP 556
Cdd:PRK14948 444 lwqqilaklELPSTrmllsqqaelvsldsnraviavspnwlgmvqSRKPLLEQafakvlgrsiklnleSQSGSASNTAKT 523
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907070839 557 EPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPEP 630
Cdd:PRK14948 524 PPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPT-PSPTKDSSPEE 596
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
465-654 |
4.59e-10 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 63.83 E-value: 4.59e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 465 PKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTlkEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTT 544
Cdd:PRK14948 363 AFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAAT--TPSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLN 440
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 545 LKEPEPTTPKEPEPTTTK------------EPESTT-----------------------------------RKEPEPTTP 577
Cdd:PRK14948 441 LEELWQQILAKLELPSTRmllsqqaelvslDSNRAViavspnwlgmvqsrkplleqafakvlgrsiklnleSQSGSASNT 520
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070839 578 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKePEPTTPKEPEP 654
Cdd:PRK14948 521 AKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPT-PSPTKDSSPEE 596
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
371-858 |
5.82e-10 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 64.19 E-value: 5.82e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 371 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE----PPPTTKKPEPTTPKEPEPTTPKEPEPTTTKEPEPTTTKEPES 446
Cdd:PHA03247 2502 GPPDPDAPPAPSRLAPAILPDEPVGEPVHPRMLTwirgLEELASDDAGDPPPPLPPAAPPAAPDRSVPPPRPAPRPSEPA 2581
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 447 TTRKEPEPTTPkePEPTTPKEP--EPTTPKEPEPTTPKEPEPTTLKEPEPTtpkePEPTTLKEPEPTTPKEPEPTTPKE- 523
Cdd:PHA03247 2582 VTSRARRPDAP--PQSARPRAPvdDRGDPRGPAPPSPLPPDTHAPDPPPPS----PSPAANEPDPHPPPTVPPPERPRDd 2655
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 524 PEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 603
Cdd:PHA03247 2656 PAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPAL 2735
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 604 PEPTTPKePEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPE----PT 679
Cdd:PHA03247 2736 PAAPAPP-AVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPaavlAP 2814
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 680 TPKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVtAPAEEIQNKPEE----TTPASEDSDDSKTTLKPQKPT 755
Cdd:PHA03247 2815 AAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSV-APGGDVRRRPPSrspaAKPAAPARPPVRRLARPAVSR 2893
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 756 KAPKPTKKPTKAPKKPTSTKKPKTPKTRKPKTTPSPlkttsaTPELNTTPL-EVMLPTTTIPKQTPNPETAEVNPDHEDA 834
Cdd:PHA03247 2894 STESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQP------QPPPPPPPRpQPPLAPTTDPAGAGEPSGAVPQPWLGAL 2967
|
490 500
....*....|....*....|....*.
gi 1907070839 835 DGGEGEKP--LIPGPPVLFPTAIPGT 858
Cdd:PHA03247 2968 VPGRVAVPrfRVPQPAPSREAPASST 2993
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
447-669 |
7.31e-10 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 63.47 E-value: 7.31e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 447 TTRKEPEPTTPKEPEPTTPKE--PEPTTPKEPEPTTPKEPEPTTlKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEP 524
Cdd:PRK07764 590 PAPGAAGGEGPPAPASSGPPEeaARPAAPAAPAAPAAPAPAGAA-AAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDG 668
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 525 EPTTLKEPEPTTPKEPEPttlkePEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 604
Cdd:PRK07764 669 WPAKAGGAAPAAPPPAPA-----PAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPP 743
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1907070839 605 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEptTPKEPEPttpkEPEPTTPKEPE 669
Cdd:PRK07764 744 EPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEE--MAEDDAP----SMDDEDRRDAE 802
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
502-697 |
7.54e-10 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 63.36 E-value: 7.54e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 502 PTTLKEPEPTTPKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPE 581
Cdd:PRK12323 375 ATAAAAPVAQPAPAAAAPAAAAPAPAA---PPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPA 451
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 582 PTTPKEPEPTTP---KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEP--TTPKEPEPTTPKEPEPTT 656
Cdd:PRK12323 452 PAPAAAPAAAARpaaAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPaqPDAAPAGWVAESIPDPAT 531
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 1907070839 657 PKEPEPTTPKEPEPTTRKEPEPTTPKEPE--PTTPKEPEPTTP 697
Cdd:PRK12323 532 ADPDDAFETLAPAPAAAPAPRAAAATEPVvaPRPPRASASGLP 574
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
463-693 |
1.53e-09 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 62.31 E-value: 1.53e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 463 TTPKEPEPTTPKEPEPTTPKEPEPttlkepEPTTPKEPEpttlkEPEPTTPkepePTTPKEPEPTTLKEPEPTTPKEPEP 542
Cdd:PRK07764 590 PAPGAAGGEGPPAPASSGPPEEAA------RPAAPAAPA-----APAAPAP----AGAAAAPAEASAAPAPGVAAPEHHP 654
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 543 TTLKEPEPTTPKEPEPtttkePESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 622
Cdd:PRK07764 655 KHVAVPDASDGGDGWP-----AKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGAS 729
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907070839 623 TTPKEPEPTTPKKPEPTTPKEPEPtTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTP---KEPEPTTPKEPE 693
Cdd:PRK07764 730 APSPAADDPVPLPPEPDDPPDPAG-APAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEddaPSMDDEDRRDAE 802
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
492-670 |
1.58e-09 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 61.90 E-value: 1.58e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 492 PEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTlkEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKE 571
Cdd:PRK14948 366 SEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAAT--TPSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLNLEE 443
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 572 ---------PEPTT-------------------------------PKEPEPTTP---------------KEPEPTTPKEP 596
Cdd:PRK14948 444 lwqqilaklELPSTrmllsqqaelvsldsnraviavspnwlgmvqSRKPLLEQAfakvlgrsiklnlesQSGSASNTAKT 523
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907070839 597 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPEP 670
Cdd:PRK14948 524 PPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPT-PSPTKDSSPEE 596
|
|
| Hemopexin |
pfam00045 |
Hemopexin; Hemopexin is a heme-binding protein that transports heme to the liver. ... |
931-968 |
1.58e-09 |
|
Hemopexin; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metallopeptidases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metallopeptidases (TIMPs).
Pssm-ID: 395000 [Multi-domain] Cd Length: 44 Bit Score: 54.49 E-value: 1.58e-09
10 20 30
....*....|....*....|....*....|....*...
gi 1907070839 931 IDTVFTRCNceGKTFFFKDSQYWRFTNDVVDPGYPKQI 968
Cdd:pfam00045 1 IDAAFEDRD--GKTYFFKGRKYWRFDPQRVEPGYPKLI 36
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
481-699 |
1.61e-09 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 61.87 E-value: 1.61e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 481 PKEPEPTTLKEPEPTTPKEPEPTTLKEPEptTPKEPEPTTPKEPEPTTLKEP-EPTTPKEPEPTTLKEPEPTT------P 553
Cdd:PLN03209 330 PKESDAADGPKPVPTKPVTPEAPSPPIEE--EPPQPKAVVPRPLSPYTAYEDlKPPTSPIPTPPSSSPASSKSvdavakP 407
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 554 KEPEPTTTKEPESTT-RKEPEPTTPKEPEPTTP--KEPEPTTPKEPEPTTPKEPEPTTPKEP-EPTTPKEPEPTTPKEPE 629
Cdd:PLN03209 408 AEPDVVPSPGSASNVpEVEPAQVEAKKTRPLSPyaRYEDLKPPTSPSPTAPTGVSPSVSSTSsVPAVPDTAPATAATDAA 487
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 630 PTTPKKPEPTTPkepeptTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKK 699
Cdd:PLN03209 488 APPPANMRPLSP------YAVYDDLKPPTSPSPAAPVGKVAPSSTNEVVKVGNSAPPTALADEQHHAQPK 551
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
589-675 |
1.70e-09 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 62.12 E-value: 1.70e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 589 EPTTPKEPEPTTPKEPEPTTPKepepttPKEPEPTTPKEPEPTTPKKPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPKEP 668
Cdd:PRK15313 559 EPDEPIIPDPVDPVIPDPVIPD------PVDPDPVDPVIPDPVIPDPVDPD-PVDPEPVDPVIPDPTIPDIGQSDTPPIT 631
|
....*..
gi 1907070839 669 EPTTRKE 675
Cdd:PRK15313 632 EHQFRPE 638
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
450-521 |
2.41e-09 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 56.60 E-value: 2.41e-09
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907070839 450 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTP 521
Cdd:pfam02389 52 KVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVPEPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
455-677 |
2.43e-09 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 61.54 E-value: 2.43e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 455 TTPKEPEPTTPKEPEPTTPKE--PEPTTPKEPEPTtlkePEPTTPKEPepttlKEPEPTTPKEPEPTTPKEPEPTTLKEP 532
Cdd:PRK07764 590 PAPGAAGGEGPPAPASSGPPEeaARPAAPAAPAAP----AAPAPAGAA-----AAPAEASAAPAPGVAAPEHHPKHVAVP 660
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 533 EPTTPKEPEPTTLKEPEPTTPKEPEPtttkePESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 612
Cdd:PRK07764 661 DASDGGDGWPAKAGGAAPAAPPPAPA-----PAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAA 735
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070839 613 EPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP--TTRKEPE 677
Cdd:PRK07764 736 DDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAPSMddEDRRDAE 802
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
444-693 |
3.40e-09 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 61.24 E-value: 3.40e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 444 PESTTRkepePTTPKEPE-PTTPKEPE-PTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTP 521
Cdd:PTZ00449 636 PPPPQR----PSSPERPEgPKIIKSPKpPKSPKPPFDPKFKEKFYDDYLDAAAKSKETKTTVVLDESFESILKETLPETP 711
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 522 KEPEPTTLKEPePTTPKEPEP--TTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTP---------KEP----EPTTPK 586
Cdd:PTZ00449 712 GTPFTTPRPLP-PKLPRDEEFpfEPIGDPDAEQPDDIEFFTPPEEERTFFHETPADTPlpdilaeefKEEdihaETGEPD 790
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 587 EP--EPTTPKEPEPTTPKEpEPTTPKEPE-------PTTPKEPEP-TTPKEP--EPTTPKKPEP----TTPKEPEPTTPK 650
Cdd:PTZ00449 791 EAmkRPDSPSEHEDKPPGD-HPSLPKKRHrldglalSTTDLESDAgRIAKDAsgKIVKLKRSKSfddlTTVEEAEEMGAE 869
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1907070839 651 ------EPEPTTPKEPEPTTPKEPEPTT--RKEPEPTTPKEPEPTTPKEPE 693
Cdd:PTZ00449 870 arkivvDDDGTEADDEDTHPPEEKHKSEvrRRRPPKKPSKPKKPSKPKKPK 920
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
573-662 |
3.72e-09 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 60.97 E-value: 3.72e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 573 EPTTPKEPEPTTPKEPEPTTPKepepttPKEPEPTTPKEPEPTTPKEPEPtTPKEPEPTTPKKPEPTTPKEPEPTTPkep 652
Cdd:PRK15313 559 EPDEPIIPDPVDPVIPDPVIPD------PVDPDPVDPVIPDPVIPDPVDP-DPVDPEPVDPVIPDPTIPDIGQSDTP--- 628
|
90
....*....|
gi 1907070839 653 ePTTPKEPEP 662
Cdd:PRK15313 629 -PITEHQFRP 637
|
|
| NESP55 |
pfam06390 |
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian ... |
452-622 |
3.86e-09 |
|
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian neuroendocrine-specific golgi protein P55 (NESP55) sequences. NESP55 is a novel member of the chromogranin family and is a soluble, acidic, heat-stable secretory protein that is expressed exclusively in endocrine and nervous tissues, although less widely than chromogranins.
Pssm-ID: 115071 [Multi-domain] Cd Length: 261 Bit Score: 58.72 E-value: 3.86e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 452 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK-EPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLK 530
Cdd:pfam06390 81 PEPSEPESDHEDEDFEPELARPECLEYDEDDfDTETDSETEPESDIESETEFETEPETEPDTAPTTEPETEPEDEPGPVV 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 531 EPEPTTPKE--PEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKEPEPT 607
Cdd:pfam06390 161 PKGATFHQSltERLHALKLQSADASPRRAPPSTQEPESAREGEEPERGPLDKDPRDPEEeEEEKEEEKQQPHRCKPKKPA 240
|
170
....*....|....*
gi 1907070839 608 TPKEPEPTTPKEPEP 622
Cdd:pfam06390 241 RRRDPSPESPPKKGA 255
|
|
| PRK08691 |
PRK08691 |
DNA polymerase III subunits gamma and tau; Validated |
485-686 |
4.35e-09 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 60.88 E-value: 4.35e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 485 EPTTLKEPEPTTPKEPepTTLKEPEPTtpkePEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEP 564
Cdd:PRK08691 373 ENTELQSPSAQTAEKE--TAAKKPQPR----PEAETAQTPVQTASAAAMPSEGKTAGPVSNQENNDVPPWEDAPDEAQTA 446
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 565 ESTTRKePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKKPEPTTPKE 643
Cdd:PRK08691 447 AGTAQT-SAKSIQTASEAETPPENQVSKNKAADNETDAPLSEVPSENPIQATPnDEAVETETFAHEAPAEPFYGYGFPDN 525
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1907070839 644 PEPTTPKEPEPTTPKE-PEPTTPKEPEPTTRKEP----EPTTPKEPEP 686
Cdd:PRK08691 526 DCPPEDGAEIPPPDWEhAAPADTAGGGADEEAEAggigGNNTPSAPPP 573
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
477-697 |
4.91e-09 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 60.33 E-value: 4.91e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 477 EPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEP-EPTTPKE 555
Cdd:PLN03209 308 ETTAPLTPMEELLAKIPSQRVPPKESDAADGPKPVPTKPVTPEAPSPPIEEEPPQPKAVVPRPLSPYTAYEDlKPPTSPI 387
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 556 PEPTTTKEPESTtrkePEPTTPKEPEPTTPKEPEPTT---PKEPEPTTPKEPEPTTP--KEPEPTTPKEPEPTTPKEPEP 630
Cdd:PLN03209 388 PTPPSSSPASSK----SVDAVAKPAEPDVVPSPGSASnvpEVEPAQVEAKKTRPLSPyaRYEDLKPPTSPSPTAPTGVSP 463
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070839 631 TTpkKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPkEPEPTTPKEPEPTTP 697
Cdd:PLN03209 464 SV--SSTSSVPAVPDTAPATAATDAAAPPPANMRPLSPYAVYDDLKPPTSP-SPAAPVGKVAPSSTN 527
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
495-694 |
5.93e-09 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 60.38 E-value: 5.93e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 495 TTPKEPEPTTLKEPEPTTPKE--PEPTTPKEPEPTTlKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEP 572
Cdd:PRK07764 590 PAPGAAGGEGPPAPASSGPPEeaARPAAPAAPAAPA-APAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDG 668
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 573 EPTTPKEPEPTTPKE---PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTP 649
Cdd:PRK07764 669 WPAKAGGAAPAAPPPapaPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDP 748
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 1907070839 650 KEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEP 694
Cdd:PRK07764 749 PDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAPSM 793
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
536-689 |
6.00e-09 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 59.01 E-value: 6.00e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 536 TPKEPEPTTLKEPEPTTPKEPEPTTTKE---PESTTRKEPEPTTPKEPEPTTPKEPEPT-TPKEPEPTTPKEPEPTTPKE 611
Cdd:NF040712 178 TALDDEARWLIDPDFGRPLRPLATVPRLarePADARPEEVEPAPAAEGAPATDSDPAEAgTPDDLASARRRRAGVEQPED 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 612 PEPTTPKEPEPttpkEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTP---KEPEPTT 688
Cdd:NF040712 258 EPVGPGAAPAA----EPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKpkrRRRRASV 333
|
.
gi 1907070839 689 P 689
Cdd:NF040712 334 P 334
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
581-670 |
8.27e-09 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 59.81 E-value: 8.27e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 581 EPTTPKEPEPTTPKEPEPTTPKepepttPKEPEPTTPKEPEPTTPKEPEPtTPKKPEPTTPKEPEPTTPKEPEPTTPkep 660
Cdd:PRK15313 559 EPDEPIIPDPVDPVIPDPVIPD------PVDPDPVDPVIPDPVIPDPVDP-DPVDPEPVDPVIPDPTIPDIGQSDTP--- 628
|
90
....*....|
gi 1907070839 661 ePTTPKEPEP 670
Cdd:PRK15313 629 -PITEHQFRP 637
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
460-680 |
9.98e-09 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 59.95 E-value: 9.98e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 460 PEPTTPKEPEPTTPKEPEPTTPKEPEP---------TTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTP----KEPEP 526
Cdd:PHA03247 269 PETARGATGPPPPPEAAAPNGAAAPPDgvwgaalagAPLALPAPPDPPPPAPAGDAEEEDDEDGAMEVVSPlprpRQHYP 348
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 527 TTL---KEPEPTTPKEPEPTTLKEPEPttPKEPEPTTTKEpesTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 603
Cdd:PHA03247 349 LGFpkrRRPTWTPPSSLEDLSAGRHHP--KRASLPTRKRR---SARHAATPFARGPGGDDQTRPAAPVPASVPTPAPTPV 423
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907070839 604 PepttpkEPEPTTPKEPEPTtpkePEPTTPKKPEPTtpkePEPTTPKEPEPTTPKEPEPTTPKEPEP-TTRKEPEPTT 680
Cdd:PHA03247 424 P------ASAPPPPATPLPS----AEPGSDDGPAPP----PERQPPAPATEPAPDDPDDATRKALDAlRERRPPEPPG 487
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
513-683 |
1.04e-08 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 59.49 E-value: 1.04e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 513 PKEPEPTTPKEPEPTTlkepePTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTP--KEPEP 590
Cdd:PRK07994 361 PAAPLPEPEVPPQSAA-----PAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQlqRAQGA 435
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 591 TTPKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKEPepttPKKPEPTTPKEPEPTTPKEPEPTTPKEPEP--TTPKEP 668
Cdd:PRK07994 436 TKAKKSEPAAASRARPV-NSALERLASVRPAPSALEKA----PAKKEAYRWKATNPVEVKKEPVATPKALKKalEHEKTP 510
|
170
....*....|....*
gi 1907070839 669 EPTTRKEPEPTTPKE 683
Cdd:PRK07994 511 ELAAKLAAEAIERDP 525
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
470-665 |
1.16e-08 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 59.50 E-value: 1.16e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 470 PTTPKEPEPTTPKEPEPTTLKEPEPTTPkEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTtlKEPE 549
Cdd:PRK12323 375 ATAAAAPVAQPAPAAAAPAAAAPAPAAP-PAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGA--PAPA 451
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 550 PTTPKEPEPTT---TKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP--TTPKEPEPTTPKEPEPTT 624
Cdd:PRK12323 452 PAPAAAPAAAArpaAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPaqPDAAPAGWVAESIPDPAT 531
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 1907070839 625 PKEPEPTTPKKPEPTTPKEPEPTTPKEPE--PTTPKEPEPTTP 665
Cdd:PRK12323 532 ADPDDAFETLAPAPAAAPAPRAAAATEPVvaPRPPRASASGLP 574
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
497-675 |
1.20e-08 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 59.11 E-value: 1.20e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 497 PKEPEPTTlkePEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTT 576
Cdd:PRK07994 361 PAAPLPEP---EVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATK 437
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 577 PKEPEPTTPKEPEPtTPKEPEPTTPKEPEPTTPKEPepttPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEpeptt 656
Cdd:PRK07994 438 AKKSEPAAASRARP-VNSALERLASVRPAPSALEKA----PAKKEAYRWKATNPVEVKKEPVATPKALKKALEHE----- 507
|
170
....*....|....*....
gi 1907070839 657 pKEPEPTTPKEPEPTTRKE 675
Cdd:PRK07994 508 -KTPELAAKLAAEAIERDP 525
|
|
| PRK08691 |
PRK08691 |
DNA polymerase III subunits gamma and tau; Validated |
525-744 |
1.24e-08 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 59.34 E-value: 1.24e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 525 EPTTLKEPEPTTPKEPepTTLKEPEPTtpkePEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 604
Cdd:PRK08691 373 ENTELQSPSAQTAEKE--TAAKKPQPR----PEAETAQTPVQTASAAAMPSEGKTAGPVSNQENNDVPPWEDAPDEAQTA 446
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 605 EPTTPKePEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEpepttpkEPEPTTRKEPEPTTPKEP 684
Cdd:PRK08691 447 AGTAQT-SAKSIQTASEAETPPENQVSKNKAADNETDAPLSEVPSENPIQATPND-------EAVETETFAHEAPAEPFY 518
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 685 EPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTPASEDSDD 744
Cdd:PRK08691 519 GYGFPDNDCPPEDGAEIPPPDWEHAAPADTAGGGADEEAEAGGIGGNNTPSAPPPEFSTE 578
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
450-758 |
1.54e-08 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 59.41 E-value: 1.54e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 450 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTtlkePEPTTPKEPEPTTPKEPEPTTL 529
Cdd:PHA03307 59 AAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPS----SPDPPPPTPPPASPPPSPAPDL 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 530 KEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKE-PEPTTPKEPEPTT 608
Cdd:PHA03307 135 SEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAaASPRPPRRSSPIS 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 609 PKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKE-PEPTTPKEPEPTTPKepePTTPKEPEPTTRKEPEPTTPKEPEPT 687
Cdd:PHA03307 215 ASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWgPENECPLPRPAPITL---PTRIWEASGWNGPSSRPGPASSSSSP 291
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070839 688 TPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTPASEDSDDSKTTLKPQKPTKAP 758
Cdd:PHA03307 292 RERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADP 362
|
|
| NESP55 |
pfam06390 |
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian ... |
516-699 |
1.79e-08 |
|
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian neuroendocrine-specific golgi protein P55 (NESP55) sequences. NESP55 is a novel member of the chromogranin family and is a soluble, acidic, heat-stable secretory protein that is expressed exclusively in endocrine and nervous tissues, although less widely than chromogranins.
Pssm-ID: 115071 [Multi-domain] Cd Length: 261 Bit Score: 56.80 E-value: 1.79e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 516 PEPTTPKEPEPTTLKEPEPTTPKEPEpttLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTtpKE 595
Cdd:pfam06390 81 PEPSEPESDHEDEDFEPELARPECLE---YDEDDFDTETDSETEPESDIESETEFETEPETEPDTAPTTEPETEPE--DE 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 596 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTpkepeptTPKKPEPTTPKEPEPTTPKEPEpTTPKEPEPTTPKE-PEPTTRK 674
Cdd:pfam06390 156 PGPVVPKGATFHQSLTERLHALKLQSADA-------SPRRAPPSTQEPESAREGEEPE-RGPLDKDPRDPEEeEEEKEEE 227
|
170 180
....*....|....*....|....*
gi 1907070839 675 EPEPTTPKEPEPTTPKEPEPTTPKK 699
Cdd:pfam06390 228 KQQPHRCKPKKPARRRDPSPESPPK 252
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
486-689 |
1.90e-08 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 58.73 E-value: 1.90e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 486 PTTLKEPEPTTPKEPEPTTLKEPEPTTPkepEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPE 565
Cdd:PRK12323 375 ATAAAAPVAQPAPAAAAPAAAAPAPAAP---PAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPA 451
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 566 STTRKEPEPTTP---KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP--TTPKEPEPTTPKKPEPTT 640
Cdd:PRK12323 452 PAPAAAPAAAARpaaAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPaqPDAAPAGWVAESIPDPAT 531
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1907070839 641 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTtrkepePTTPKEPEPTTP 689
Cdd:PRK12323 532 ADPDDAFETLAPAPAAAPAPRAAAATEPVVA------PRPPRASASGLP 574
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
613-697 |
2.02e-08 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 58.66 E-value: 2.02e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 613 EPTTPKEPEPTTPKEPEPTTPKkpepttPKEPEPTTPKEPEPTTPKepepttPKEPEPTtrkEPEPTTPKEPEPTTPKEP 692
Cdd:PRK15313 559 EPDEPIIPDPVDPVIPDPVIPD------PVDPDPVDPVIPDPVIPD------PVDPDPV---DPEPVDPVIPDPTIPDIG 623
|
....*
gi 1907070839 693 EPTTP 697
Cdd:PRK15313 624 QSDTP 628
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
597-678 |
2.02e-08 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 58.66 E-value: 2.02e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 597 EPTTPKEPEPTTPKEPEPTTPKepepttPKEPEPTTPKKPEPTTPKEPEPtTPKEPEPTTPKEPEPTTP----KEPEPTT 672
Cdd:PRK15313 559 EPDEPIIPDPVDPVIPDPVIPD------PVDPDPVDPVIPDPVIPDPVDP-DPVDPEPVDPVIPDPTIPdigqSDTPPIT 631
|
....*.
gi 1907070839 673 RKEPEP 678
Cdd:PRK15313 632 EHQFRP 637
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
480-633 |
2.03e-08 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 57.47 E-value: 2.03e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 480 TPKEPEPTTLKEPEPTTPKEPEPTTLKE---PEPTTPKEPEPTTPKEPEPTTLKEPEPT-TPKEPEPTTLKEPEPTTPKE 555
Cdd:NF040712 178 TALDDEARWLIDPDFGRPLRPLATVPRLarePADARPEEVEPAPAAEGAPATDSDPAEAgTPDDLASARRRRAGVEQPED 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 556 PEPTTTKEPESttrkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP---KEPEPTT 632
Cdd:NF040712 258 EPVGPGAAPAA----EPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKpkrRRRRASV 333
|
.
gi 1907070839 633 P 633
Cdd:NF040712 334 P 334
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
446-694 |
2.08e-08 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 58.64 E-value: 2.08e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 446 STTRKEPEPTTPKEPEPTTPKE--PEPTTPKEPEPTTPKEPEPTTLKEPEPTTPkEPEPTTLKEPEPTTPKEPEPTTPKE 523
Cdd:PHA03307 112 SSPDPPPPTPPPASPPPSPAPDlsEMLRPVGSPGPPPAASPPAAGASPAAVASD-AASSRQAALPLSSPEETARAPSSPP 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 524 PEPTTLKEPEPTTPKEPEPttlKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKE-------PEPTTPKEPE-----PT 591
Cdd:PHA03307 191 AEPPPSTPPAAASPRPPRR---SSPISASASSPAPAPGRSAADDAGASSSDSSSSEssgcgwgPENECPLPRPapitlPT 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 592 TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK-----------------KPEPTTPKEPEPTTPKEPEP 654
Cdd:PHA03307 268 RIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSsprasssssssressssSTSSSSESSRGAAVSPGPSP 347
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 1907070839 655 TTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEP 694
Cdd:PHA03307 348 SRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTR 387
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
454-657 |
2.09e-08 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 58.35 E-value: 2.09e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 454 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTtlkEPEPTTPKEPEPTTPKEPEPTTLKEPE 533
Cdd:PRK12323 375 ATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPA---RRSPAPEALAAARQASARGPGGAPAPA 451
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 534 PTTPKEPEPTTlkepePTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEP--TTPKEPEPTTPKE 611
Cdd:PRK12323 452 PAPAAAPAAAA-----RPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPaqPDAAPAGWVAESI 526
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1907070839 612 PEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPE--PTTPKEPEPTTP 657
Cdd:PRK12323 527 PDPATADPDDAFETLAPAPAAAPAPRAAAATEPVvaPRPPRASASGLP 574
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
496-649 |
2.17e-08 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 57.47 E-value: 2.17e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 496 TPKEPEPTTLKEPEPTTPKEPEPTTPKEPepttlKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPT 575
Cdd:NF040712 178 TALDDEARWLIDPDFGRPLRPLATVPRLA-----REPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGV 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 576 TPKEPEPTTP-----KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTP---KEPEPT 647
Cdd:NF040712 253 EQPEDEPVGPgaapaAEPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKpkrRRRRAS 332
|
..
gi 1907070839 648 TP 649
Cdd:NF040712 333 VP 334
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
548-694 |
2.32e-08 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 58.34 E-value: 2.32e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 548 PEPTTPKEP-EPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP--KEPEPTTPKEPEPTT 624
Cdd:PRK07994 366 PEPEVPPQSaAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQlqRAQGATKAKKSEPAA 445
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 625 PKEPEPtTPKKPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPTtrKEPEPTTPKEPEPTTPKEPEP 694
Cdd:PRK07994 446 ASRARP-VNSALERLASVRPAPSAL--EKAPAKKEAYRWKATNPVEV--KKEPVATPKALKKALEHEKTP 510
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
465-633 |
2.54e-08 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 57.95 E-value: 2.54e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 465 PKEPEPTTPKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTT 544
Cdd:PRK07994 361 PAAPLPEPEVPPQSAAPAASAQAT---AAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATK 437
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 545 LKEPEPTTPKEPEPTTTkEPESTTRKEPEPTTPKEPepttPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP--TTPKEPEP 622
Cdd:PRK07994 438 AKKSEPAAASRARPVNS-ALERLASVRPAPSALEKA----PAKKEAYRWKATNPVEVKKEPVATPKALKKalEHEKTPEL 512
|
170
....*....|.
gi 1907070839 623 TTPKEPEPTTP 633
Cdd:PRK07994 513 AAKLAAEAIER 523
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
588-667 |
2.78e-08 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 58.36 E-value: 2.78e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 588 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 667
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
520-681 |
3.13e-08 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 57.08 E-value: 3.13e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 520 TPKEPEPTTLKEPEPTTPkEPEPTTLKEPEPttpkEPEPTTTKEPESTTRKEPEPTTPKEPEPT-TPKEPEPTTPKEPEP 598
Cdd:NF040712 178 TALDDEARWLIDPDFGRP-LRPLATVPRLAR----EPADARPEEVEPAPAAEGAPATDSDPAEAgTPDDLASARRRRAGV 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 599 TTPKEPEPTTPKEPEPttpkEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT---RKE 675
Cdd:NF040712 253 EQPEDEPVGPGAAPAA----EPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPkpkRRR 328
|
....*.
gi 1907070839 676 PEPTTP 681
Cdd:NF040712 329 RRASVP 334
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
580-659 |
3.15e-08 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 58.36 E-value: 3.15e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 580 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKE 659
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
553-695 |
3.29e-08 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 57.95 E-value: 3.29e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 553 PKEPEPTTTKEPESTTrkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 632
Cdd:PRK07994 361 PAAPLPEPEVPPQSAA---PAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATK 437
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070839 633 PKKPEPTTPKEPEPtTPKEPEPTTPKEPEPTT----PKEPEPTTRKEPEPTTPKEPEPTTPKEPEPT 695
Cdd:PRK07994 438 AKKSEPAAASRARP-VNSALERLASVRPAPSAlekaPAKKEAYRWKATNPVEVKKEPVATPKALKKA 503
|
|
| Aim21 |
pfam11489 |
Altered inheritance of mitochondria protein 21; This is a family of proteins conserved in ... |
449-666 |
3.32e-08 |
|
Altered inheritance of mitochondria protein 21; This is a family of proteins conserved in yeasts. Saccharomyces cerevisiae Aim21 may be involved in mitochondrial migration along actin filament. It may also interact with ribosomes.
Pssm-ID: 371558 [Multi-domain] Cd Length: 677 Bit Score: 57.67 E-value: 3.32e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 449 RKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTL---KEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPE 525
Cdd:pfam11489 339 REEIVKYEVKSRTESVPESREESKIASIHGSVPSLARHTPLedvEEYEPLFPEDDSEGAVKKPTEESSRFKRPELNHRFP 418
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 526 PTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEP--------- 596
Cdd:pfam11489 419 SEDVWEDSPSSLQLTATVSTPSNPPPRAFETPEQETSSSSSEPSLDDQSELKSEDVKERPEVKAQRFPSRDvwedapesq 498
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 597 ----EPTTPKEPEPTTPKEPE----PTTPKEPEPTTPKEPE--PTTPKKPEPTTPKEPE-PTTPKEPEPTTPKEPEPTTP 665
Cdd:pfam11489 499 elvtTVETPDEVKSTSPGVPTkpaiPARPKSGKPTSPTEKRkpPPVPKKPKPQIPARPAkAQPQQAGEEFKPKPRVPARP 578
|
.
gi 1907070839 666 K 666
Cdd:pfam11489 579 G 579
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
446-696 |
4.11e-08 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 58.03 E-value: 4.11e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 446 STTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPttlkePEPTTPKEPEPTTLKEPEPTTPKEPEP------- 518
Cdd:PHA03247 228 SETYLQDEPFVERRVVISHPLRGDIAAPAPPPVVGEGADRA-----PETARGATGPPPPPEAAAPNGAAAPPDgvwgaal 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 519 --TTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKePEPTTTKEPESTTRKEPEPTTPKEPEPTT------PKEPEP 590
Cdd:PHA03247 303 agAPLALPAPPDPPPPAPAGDAEEEDDEDGAMEVVSPL-PRPRQHYPLGFPKRRRPTWTPPSSLEDLSagrhhpKRASLP 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 591 TTPKEPEPTTpKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPT-TPKEPE-PTTPKEPEPTTPkeP 668
Cdd:PHA03247 382 TRKRRSARHA-ATPFARGPGGDDQTRPAAPVPASVPTPAPTPVPASAPPPPATPLPSaEPGSDDgPAPPPERQPPAP--A 458
|
250 260
....*....|....*....|....*....
gi 1907070839 669 EPTTRKEPEPTTPKEPEP-TTPKEPEPTT 696
Cdd:PHA03247 459 TEPAPDDPDDATRKALDAlRERRPPEPPG 487
|
|
| DUF4045 |
pfam13254 |
Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. ... |
518-686 |
4.59e-08 |
|
Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. This domain family is found in bacteria and eukaryotes, and is typically between 384 and 430 amino acids in length.
Pssm-ID: 433066 [Multi-domain] Cd Length: 415 Bit Score: 56.71 E-value: 4.59e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 518 PTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPEStTRKEPEPTTPKEPEPTTPKEPEPTTPKEPE 597
Cdd:pfam13254 197 PNSFKEVTPVGLMRSPAPGGHSKSPSVSGISADSSPTKEEPSEEADTLS-TDKEQSPAPTSASEPPPKTKELPKDSEEPA 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 598 PTTPKEPEPTTPKEPEptTPKEPEPTTPKEPEPTTPKKPEPTTPKepePTTPKEPEPTTPKEPEPTTPKEPEPTTRK-EP 676
Cdd:pfam13254 276 APSKSAEASTEKKEPD--TESSPETSSEKSAPSLLSPVSKASIDK---PLSSPDRDPLSPKPKPQSPPKDFRANLRSrEV 350
|
170
....*....|
gi 1907070839 677 EPTTPKEPEP 686
Cdd:pfam13254 351 PKDKSKKDEP 360
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
462-652 |
4.60e-08 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 57.74 E-value: 4.60e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 462 PTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTlkEPEPTTPKEPEPTTPKEPepttlkePEPTTPKEPE 541
Cdd:PRK10811 846 PVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVV--EAVAEVVEEPVVVAEPQP-------EEVVVVETTH 916
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 542 PTTLKEPEPTTPKEPEPTTTKEPESTTRkEPEPTTPKEPEPTTPKEPEPTT---PKEPEP-TTPKEPEPTTPKEPEPTTP 617
Cdd:PRK10811 917 PEVIAAPVTEQPQVITESDVAVAQEVAE-HAEPVVEPQDETADIEEAAETAevvVAEPEVvAQPAAPVVAEVAAEVETVT 995
|
170 180 190
....*....|....*....|....*....|....*..
gi 1907070839 618 KEPEPTTPKEPEPTTPKKPEPTTP--KEPEPTTPKEP 652
Cdd:PRK10811 996 AVEPEVAPAQVPEATVEHNHATAPmtRAPAPEYVPEA 1032
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
450-658 |
5.03e-08 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 57.24 E-value: 5.03e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 450 KEPEPTTPKEPEPTTPKEPEPTTPK-EPEPTTPK--------------EPEPTTLKEPEPTTPKEPEPTTL----KEPEP 510
Cdd:PLN03209 331 KESDAADGPKPVPTKPVTPEAPSPPiEEEPPQPKavvprplspytayeDLKPPTSPIPTPPSSSPASSKSVdavaKPAEP 410
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 511 TTPKEPEPTT---PKEPEPTTLKEPEPTTP----KEPEPTTLKEPEPTTPKEP----EPTTTKEPESTTRKEPEPTTPKE 579
Cdd:PLN03209 411 DVVPSPGSASnvpEVEPAQVEAKKTRPLSPyaryEDLKPPTSPSPTAPTGVSPsvssTSSVPAVPDTAPATAATDAAAPP 490
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 580 PEPTTPKEPEPT-----TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTP--KEPEPTTPKEP 652
Cdd:PLN03209 491 PANMRPLSPYAVyddlkPPTSPSPAAPVGKVAPSSTNEVVKVGNSAPPTALADEQHHAQPKPRPLSPytMYEDLKPPTSP 570
|
....*.
gi 1907070839 653 EPTTPK 658
Cdd:PLN03209 571 TPSPVL 576
|
|
| NESP55 |
pfam06390 |
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian ... |
468-654 |
5.40e-08 |
|
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian neuroendocrine-specific golgi protein P55 (NESP55) sequences. NESP55 is a novel member of the chromogranin family and is a soluble, acidic, heat-stable secretory protein that is expressed exclusively in endocrine and nervous tissues, although less widely than chromogranins.
Pssm-ID: 115071 [Multi-domain] Cd Length: 261 Bit Score: 55.26 E-value: 5.40e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 468 PEPTTPKEPEPTTPKEPEpttLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTtlKE 547
Cdd:pfam06390 81 PEPSEPESDHEDEDFEPE---LARPECLEYDEDDFDTETDSETEPESDIESETEFETEPETEPDTAPTTEPETEPE--DE 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 548 PEPTTPKEPE-PTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEpTTPKEPEPTTPKEPEpttpkEPEPTTPK 626
Cdd:pfam06390 156 PGPVVPKGATfHQSLTERLHALKLQSADASPRRAPPSTQEPESAREGEEPE-RGPLDKDPRDPEEEE-----EEKEEEKQ 229
|
170 180
....*....|....*....|....*...
gi 1907070839 627 EPEPTTPKKPEPTTPKEPEPTTPKEPEP 654
Cdd:pfam06390 230 QPHRCKPKKPARRRDPSPESPPKKGAIP 257
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
521-697 |
5.73e-08 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 57.18 E-value: 5.73e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 521 PKEPEPTTLKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 600
Cdd:PRK07994 361 PAAPLPEPEVPPQSAAPAASAQAT---AAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATK 437
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 601 PKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKKPepttPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEpeptt 680
Cdd:PRK07994 438 AKKSEPAAASRARPV-NSALERLASVRPAPSALEKA----PAKKEAYRWKATNPVEVKKEPVATPKALKKALEHE----- 507
|
170
....*....|....*..
gi 1907070839 681 pKEPEPTTPKEPEPTTP 697
Cdd:PRK07994 508 -KTPELAAKLAAEAIER 523
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
452-619 |
6.68e-08 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 56.80 E-value: 6.68e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 452 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTtlkEPEPTTPKEPEPttlkEPEPTTPKEPEPTTP--KEPEPTTL 529
Cdd:PRK07994 366 PEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPP---PPASAPQQAPAV----PLPETTSQLLAARQQlqRAQGATKA 438
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 530 KEPEPTTPKEPEPTTlKEPEPTTPKEPEPTTTkePESTTRKEPEPTTPKEPEPTtpKEPEPTTPKEPEP--TTPKEPEPT 607
Cdd:PRK07994 439 KKSEPAAASRARPVN-SALERLASVRPAPSAL--EKAPAKKEAYRWKATNPVEV--KKEPVATPKALKKalEHEKTPELA 513
|
170
....*....|..
gi 1907070839 608 TPKEPEPTTPKE 619
Cdd:PRK07994 514 AKLAAEAIERDP 525
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
554-858 |
6.81e-08 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 57.01 E-value: 6.81e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 554 KEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKEP-EPTTPKEPEPTTPKEPE-- 629
Cdd:PTZ00449 493 KKKLAPIEEEDSDKHDEPPEGPEASGLPPKAPGDKEGEEGeHEDSKESDEPKEGGKPGETkEGEVGKKPGPAKEHKPSki 572
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 630 PTTPKKPEptTPKEPE-PTTPKEPE-PTTPKEPE-PTTPKEPepttrKEPE----PTTPKEPE-PTTPKEPEPTTPKKPE 701
Cdd:PTZ00449 573 PTLSKKPE--FPKDPKhPKDPEEPKkPKRPRSAQrPTRPKSP-----KLPElldiPKSPKRPEsPKSPKRPPPPQRPSSP 645
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 702 PTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTPASEDSDDSKTTLKPQKPTKAPKPTKKPTKAPKKPTSTKKPKTPK 781
Cdd:PTZ00449 646 ERPEGPKIIKSPKPPKSPKPPFDPKFKEKFYDDYLDAAAKSKETKTTVVLDESFESILKETLPETPGTPFTTPRPLPPKL 725
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 782 TRKPKTTPSPLKTTSATP----ELNTTPLEVMLPTTTIPKQTPNPE--TAEVNPDHEDADGGEGEKPLI-PGPPVLFPTA 854
Cdd:PTZ00449 726 PRDEEFPFEPIGDPDAEQpddiEFFTPPEEERTFFHETPADTPLPDilAEEFKEEDIHAETGEPDEAMKrPDSPSEHEDK 805
|
....
gi 1907070839 855 IPGT 858
Cdd:PTZ00449 806 PPGD 809
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
572-651 |
7.48e-08 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 56.82 E-value: 7.48e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 572 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKE 651
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
510-665 |
8.12e-08 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 56.97 E-value: 8.12e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 510 PTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEP----EPTTTKEPESTTRKEPEPTTPKEPEPTTP 585
Cdd:PRK10811 846 PVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAevveEPVVVAEPQPEEVVVVETTHPEVIAAPVT 925
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 586 KEPEPTTPKEP--EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP-EPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEP 662
Cdd:PRK10811 926 EQPQVITESDVavAQEVAEHAEPVVEPQDETADIEEAAETAEVVVaEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQ 1005
|
...
gi 1907070839 663 TTP 665
Cdd:PRK10811 1006 VPE 1008
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
590-693 |
8.52e-08 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 56.36 E-value: 8.52e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 590 PTTPKEPEPTTPKEPEPTTPKepepTTPKEPEPTTPKEPEPTTPKKPEPTTPkepePTTPkePEPTTPkePEPTTPKEPE 669
Cdd:PRK14950 362 PVPAPQPAKPTAAAPSPVRPT----PAPSTRPKAAAAANIPPKEPVRETATP----PPVP--PRPVAP--PVPHTPESAP 429
|
90 100
....*....|....*....|....*
gi 1907070839 670 PTTRKE-PEPTTPKEPEPTTPKEPE 693
Cdd:PRK14950 430 KLTRAAiPVDEKPKYTPPAPPKEEE 454
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
596-671 |
9.09e-08 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 56.82 E-value: 9.09e-08
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070839 596 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPT 671
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAV 113
|
|
| PRK10819 |
PRK10819 |
transport protein TonB; Provisional |
571-688 |
9.70e-08 |
|
transport protein TonB; Provisional
Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 54.30 E-value: 9.70e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 571 EPEPTTPKEPEPTT-----PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKKPEPTTPKEP 644
Cdd:PRK10819 36 HQVIELPAPAQPISvtmvaPADLEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPvVIPKPEPKPKPKPKPKPKPVKKVEE 115
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 1907070839 645 EPTTPKEpepttPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTT 688
Cdd:PRK10819 116 QPKREVK-----PVEPRPASPFENTAPARPTSSTATAAASKPVT 154
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
481-659 |
1.02e-07 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 56.03 E-value: 1.02e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 481 PKEPEPTTLKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTPKEPEPTTlkEPEPTTPKEPEPTTLKEPEPTTPKEPEPTT 560
Cdd:PRK07994 361 PAAPLPEPEVPPQSAAPAASAQAT---AAPTAAVAPPQAPAVPPPPAS--APQQAPAVPLPETTSQLLAARQQLQRAQGA 435
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 561 TKEpesttrKEPEPTTPKEPEPtTPKEPEPTTPKEPEPTTPKEPepttPKEPEPTTPKEPEPTTPKEPEPTTPK--KPEP 638
Cdd:PRK07994 436 TKA------KKSEPAAASRARP-VNSALERLASVRPAPSALEKA----PAKKEAYRWKATNPVEVKKEPVATPKalKKAL 504
|
170 180
....*....|....*....|.
gi 1907070839 639 TTPKEPEPTTPKEPEPTTPKE 659
Cdd:PRK07994 505 EHEKTPELAAKLAAEAIERDP 525
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
457-694 |
1.28e-07 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 55.93 E-value: 1.28e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 457 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTlKEPEPTTPK-----EPEPTTPKEPEPTTLKE 531
Cdd:pfam03154 294 PPQPFPLTPQSSQSQVPPGPSPAAPGQSQQRIHTPPSQSQLQSQQPPR-EQPLPPAPLsmphiKPPPTTPIPQLPNPQSH 372
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 532 PEPTTPKEPEPTTLKE--PEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 609
Cdd:pfam03154 373 KHPPHLSGPSPFQMNSnlPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQQLPPPPAQPPVLTQSQSLPPPAASHPPTSG 452
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 610 KEPEPTTPKEPE-PTTPKEPEPTTPKK-PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTR-KEPEPTTPKEPEP 686
Cdd:pfam03154 453 LHQVPSQSPFPQhPFVPGGPPPITPPSgPPTSTSSAMPGIQPPSSASVSSSGPVPAAVSCPLPPVQiKEEALDEAEEPES 532
|
....*...
gi 1907070839 687 TTPKEPEP 694
Cdd:pfam03154 533 PPPPPRSP 540
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
451-640 |
1.38e-07 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 55.76 E-value: 1.38e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 451 EPEPTTPKEPEPTTPKEPePTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKE---PEPT 527
Cdd:PRK07764 612 AARPAAPAAPAAPAAPAP-AGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPapaPAAP 690
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 528 TLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPT 607
Cdd:PRK07764 691 AAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAP 770
|
170 180 190
....*....|....*....|....*....|...
gi 1907070839 608 TPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTT 640
Cdd:PRK07764 771 AAAPPPSPPSEEEEMAEDDAPSMDDEDRRDAEE 803
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
532-694 |
1.55e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 55.74 E-value: 1.55e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 532 PEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTrkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE------ 605
Cdd:PRK14948 366 SEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAAT--TPSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPslnlee 443
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 606 -----------PTT------------------------------------------------------PKEPEPTTPKEP 620
Cdd:PRK14948 444 lwqqilaklelPSTrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnleSQSGSASNTAKT 523
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907070839 621 EPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKePEPTTPKEPEP 694
Cdd:PRK14948 524 PPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPT-PSPTKDSSPEE 596
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
449-641 |
1.62e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 55.65 E-value: 1.62e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 449 RKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTP---KEPE 525
Cdd:PRK12323 391 APAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAAAPAAAARpaaAGPR 470
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 526 PTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPEsttrkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 605
Cdd:PRK12323 471 PVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPA------PAQPDAAPAGWVAESIPDPATADPDDAFETLAPA 544
|
170 180 190
....*....|....*....|....*....|....*.
gi 1907070839 606 PTTPkePEPTTPKEPEPTTPkepePTTPKKPEPTTP 641
Cdd:PRK12323 545 PAAA--PAPRAAAATEPVVA----PRPPRASASGLP 574
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
574-669 |
1.69e-07 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 55.59 E-value: 1.69e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 574 PTTPKEPEPTTPKEPEPTTPKepepTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKE-P 652
Cdd:PRK14950 362 PVPAPQPAKPTAAAPSPVRPT----PAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAPKLTRAAiP 437
|
90
....*....|....*..
gi 1907070839 653 EPTTPKEPEPTTPKEPE 669
Cdd:PRK14950 438 VDEKPKYTPPAPPKEEE 454
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
562-630 |
1.81e-07 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 51.33 E-value: 1.81e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070839 562 KEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 630
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
572-646 |
2.10e-07 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 55.58 E-value: 2.10e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070839 572 PEPTTPKEPEPTTPK--EPEPTTPKEPEPTTPKEPEPtTPKEPEPTTPKEPEPTTPKEPEPTTPkkpePTTPKEPEP 646
Cdd:PRK15313 566 PDPVDPVIPDPVIPDpvDPDPVDPVIPDPVIPDPVDP-DPVDPEPVDPVIPDPTIPDIGQSDTP----PITEHQFRP 637
|
|
| PRK13108 |
PRK13108 |
prolipoprotein diacylglyceryl transferase; Reviewed |
513-675 |
2.14e-07 |
|
prolipoprotein diacylglyceryl transferase; Reviewed
Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 54.98 E-value: 2.14e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 513 PKEPEPTT-PKEPEPTTLKEPEPTTPKEP-EPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTP----K 586
Cdd:PRK13108 295 ALEREPAElAAAAVASAASAVGPVGPGEPnQPDDVAEAVKAEVAEVTDEVAAESVVQVADRDGESTPAVEETSEAdierE 374
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 587 EPEPTTPKEPE-PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKkpepTTPKEPEPTTPKEPEPtTPKEPEPTTP 665
Cdd:PRK13108 375 QPGDLAGQAPAaHQVDAEAASAAPEEPAALASEAHDETEPEVPEKAAPI----PDPAKPDELAVAGPGD-DPAEPDGIRR 449
|
170
....*....|
gi 1907070839 666 KEPEPTTRKE 675
Cdd:PRK13108 450 QDDFSSRRRR 459
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
454-696 |
2.30e-07 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 55.16 E-value: 2.30e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 454 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEP-----------EPTTLKEPEPTTPKEPEPTTPK 522
Cdd:pfam03154 180 AASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQSTAAphtliqqtptlHPQRLPSPHPPLQPMTQPPPPS 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 523 EPEPTTLKEPEPTTPKEPEPTTLKEPEP----TTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 598
Cdd:pfam03154 260 QVSPQPLPQPSLHGQMPPMPHSLQTGPShmqhPVPPQPFPLTPQSSQSQVPPGPSPAAPGQSQQRIHTPPSQSQLQSQQP 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 599 TT----PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEP--TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 672
Cdd:pfam03154 340 PReqplPPAPLSMPHIKPPPTTPIPQLPNPQSHKHPPHLSGPSPfqMNSNLPPPPALKPLSSLSTHHPPSAHPPPLQLMP 419
|
250 260
....*....|....*....|....
gi 1907070839 673 RKEPEPTTPKEPEPTTPKEPEPTT 696
Cdd:pfam03154 420 QSQQLPPPPAQPPVLTQSQSLPPP 443
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
556-634 |
2.53e-07 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 55.28 E-value: 2.53e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070839 556 PEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 634
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDE 116
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
446-744 |
2.64e-07 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 54.99 E-value: 2.64e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 446 STTRKEPEPTTPKEPEPTTPKEPEP---TTPKEPEPTTPKEPEPTtlKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPK 522
Cdd:PRK07764 419 AAAAPAPAAAPQPAPAPAPAPAPPSpagNAPAGGAPSPPPAAAPS--AQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAA 496
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 523 EPEPTT------------------------------LKEPEPTtPKEPEPTTL----------------KEPE------- 549
Cdd:PRK07764 497 PAAPAApagaddaatlrerwpeilaavpkrsrktwaILLPEAT-VLGVRGDTLvlgfstgglarrfaspGNAEvlvtala 575
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 550 -------------PTTPKEPEPTTTKEPESTTRKE--PEPTTPKEPEPTTPKEPePTTPKEPEPTTPKEPEPTTPKEPEP 614
Cdd:PRK07764 576 eelggdwqveavvGPAPGAAGGEGPPAPASSGPPEeaARPAAPAAPAAPAAPAP-AGAAAAPAEASAAPAPGVAAPEHHP 654
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 615 TTPKEPEPTTPKEPEPTTPKKPEPTTPKE-PEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTT----- 688
Cdd:PRK07764 655 KHVAVPDASDGGDGWPAKAGGAAPAAPPPaPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASapspa 734
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070839 689 -----PKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTPASEDSDD 744
Cdd:PRK07764 735 addpvPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAPSMDD 795
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
534-697 |
2.78e-07 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 55.05 E-value: 2.78e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 534 PTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTpkEPEPTTPKEPEPTTpkEPEPTTPKEPEPTTPKEPE 613
Cdd:PRK10811 846 PVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVV--EAVAEVVEEPVVVA--EPQPEEVVVVETTHPEVIA 921
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 614 PTTPKEPEPTTPKEP--EPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEP-EPTTPKEPEPTTRKEPEPTTPKEPEPTTPK 690
Cdd:PRK10811 922 APVTEQPQVITESDVavAQEVAEHAEPVVEPQDETADIEEAAETAEVVVaEPEVVAQPAAPVVAEVAAEVETVTAVEPEV 1001
|
....*..
gi 1907070839 691 EPEPTTP 697
Cdd:PRK10811 1002 APAQVPE 1008
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
554-622 |
3.27e-07 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 50.56 E-value: 3.27e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070839 554 KEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 622
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
466-546 |
3.49e-07 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 50.56 E-value: 3.49e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 466 KEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPttpkEPEPTTL 545
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP----EPGAATL 116
|
.
gi 1907070839 546 K 546
Cdd:pfam05887 117 K 117
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
483-676 |
3.61e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 54.47 E-value: 3.61e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 483 EPEPTTLKEPEPTTPKEPePTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTtPKEPEPTTTK 562
Cdd:PRK07003 359 EPAVTGGGAPGGGVPARV-AGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAP-PAAPAPPATA 436
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 563 EPESTTRKEPEPTTPKEPEPTTPKEPEPttPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPK 642
Cdd:PRK07003 437 DRGDDAADGDAPVPAKANARASADSRCD--ERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPA 514
|
170 180 190
....*....|....*....|....*....|....
gi 1907070839 643 EPepttPKEPEPTTPKEPEPTTPkEPEPTTRKEP 676
Cdd:PRK07003 515 AA----SREDAPAAAAPPAPEAR-PPTPAAAAPA 543
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
572-661 |
3.75e-07 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 54.43 E-value: 3.75e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 572 PEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPkePEPTTPKKPEPTTPKE-PEPTTP 649
Cdd:PRK14950 366 PQPAKPTAAAPS-PVRPTPAPSTRPKAAAAANIPPKEPVrETATPPPVPPRPVAP--PVPHTPESAPKLTRAAiPVDEKP 442
|
90
....*....|..
gi 1907070839 650 KEPEPTTPKEPE 661
Cdd:PRK14950 443 KYTPPAPPKEEE 454
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
582-685 |
3.98e-07 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 54.05 E-value: 3.98e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 582 PTTPKEPEPTTPKEPEPTTPKePEPTTpkepePTTPKEPEPTTPKEPEPTTPKKPEPTtpkePEPTTPkePEPTTPKEPE 661
Cdd:PRK14950 362 PVPAPQPAKPTAAAPSPVRPT-PAPST-----RPKAAAAANIPPKEPVRETATPPPVP----PRPVAP--PVPHTPESAP 429
|
90 100
....*....|....*....|....*
gi 1907070839 662 PTTPKE-PEPTTRKEPEPTTPKEPE 685
Cdd:PRK14950 430 KLTRAAiPVDEKPKYTPPAPPKEEE 454
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
467-609 |
4.14e-07 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 53.62 E-value: 4.14e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 467 EPEPTTPKEPEPTTPKEPepttlKEPEPTTPKEPEPTTLKEPEPTTPKEPEPT-TPKEPEPTTLKEPEPTTPKEPEPTT- 544
Cdd:NF040712 189 DPDFGRPLRPLATVPRLA-----REPADARPEEVEPAPAAEGAPATDSDPAEAgTPDDLASARRRRAGVEQPEDEPVGPg 263
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070839 545 ---LKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP---KEPEPTTP 609
Cdd:NF040712 264 aapAAEPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKpkrRRRRASVP 334
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
612-691 |
4.17e-07 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 54.51 E-value: 4.17e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 612 PEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKE 691
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
620-698 |
4.28e-07 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 54.51 E-value: 4.28e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070839 620 PEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPK 698
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDE 116
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
460-686 |
4.50e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 54.09 E-value: 4.50e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 460 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKePEPTTLKEPEPTTPKE 539
Cdd:PRK07003 383 PGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADG-DAPVPAKANARASADS 461
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 540 PEPTTLKEPEPTTPKEPEPTTTKEPesTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPepttPKEPEPTTPKEPEPTTPkE 619
Cdd:PRK07003 462 RCDERDAQPPADSGSASAPASDAPP--DAAFEPAPRAAAPSAATPAAVPDARAPAAA----SREDAPAAAAPPAPEAR-P 534
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 620 PEPTTPKEP--------------------------EPTTPKKPEPTTPKEPEPTTPKEPEPT-TPKEPEPTTPKEPEPTT 672
Cdd:PRK07003 535 PTPAAAAPAaraggaaaaldvlrnagmrvssdrgaRAAAAAKPAAAPAAAPKPAAPRVAVQVpTPRARAATGDAPPNGAA 614
|
250
....*....|....
gi 1907070839 673 RKEPEPTTPKEPEP 686
Cdd:PRK07003 615 RAEQAAESRGAPPP 628
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
454-620 |
4.73e-07 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 54.28 E-value: 4.73e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 454 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTpkEPEPTTLKEPEPTTPKEPEPTTPKE-PEPTTLKEP 532
Cdd:PRK10811 846 PVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVV--EAVAEVVEEPVVVAEPQPEEVVVVEtTHPEVIAAP 923
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 533 EPTTPKEPEPTTLKEPEPTTPkEPEPTTTKEPESTTRKEPEPTT---PKEPEPTTpkepEPTTPKEPEPTTPKEPEPTTP 609
Cdd:PRK10811 924 VTEQPQVITESDVAVAQEVAE-HAEPVVEPQDETADIEEAAETAevvVAEPEVVA----QPAAPVVAEVAAEVETVTAVE 998
|
170
....*....|.
gi 1907070839 610 KEPEPTTPKEP 620
Cdd:PRK10811 999 PEVAPAQVPEA 1009
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
548-627 |
4.86e-07 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 54.13 E-value: 4.86e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 548 PEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 627
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
457-627 |
5.02e-07 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 54.10 E-value: 5.02e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 457 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTT 536
Cdd:PRK07994 361 PAAPLPEPEVPPQSAAPAASAQATAAPTAAVA---PPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATK 437
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 537 PKEPEPTTLKEPEPtTPKEPEPTTTKEPESTTRKEPepttPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP--TTPKEPEP 614
Cdd:PRK07994 438 AKKSEPAAASRARP-VNSALERLASVRPAPSALEKA----PAKKEAYRWKATNPVEVKKEPVATPKALKKalEHEKTPEL 512
|
170
....*....|...
gi 1907070839 615 TTPKEPEPTTPKE 627
Cdd:PRK07994 513 AAKLAAEAIERDP 525
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
618-686 |
5.71e-07 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 49.79 E-value: 5.71e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070839 618 KEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEP 686
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
537-699 |
5.93e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 53.81 E-value: 5.93e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 537 PKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 616
Cdd:PRK14948 361 PSAFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATTPSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLN 440
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 617 PKE---------PEPTT------------------------------------------------------PKEPEPTTP 633
Cdd:PRK14948 441 LEElwqqilaklELPSTrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnleSQSGSASNT 520
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070839 634 KKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKK 699
Cdd:PRK14948 521 AKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTP 586
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
610-678 |
6.99e-07 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 49.79 E-value: 6.99e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070839 610 KEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEP 678
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
490-558 |
7.20e-07 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 49.79 E-value: 7.20e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070839 490 KEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEP 558
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
588-695 |
7.33e-07 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 53.56 E-value: 7.33e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 588 PEPTTPKEPEPTTP---KEPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPT 663
Cdd:PRK14951 376 AEKKTPARPEAAAPaaaPVAQAAAAPAPAAAPAAAaSAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQA 455
|
90 100 110
....*....|....*....|....*....|..
gi 1907070839 664 TPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPT 695
Cdd:PRK14951 456 APETVAIPVRVAPEPAVASAAPAPAAAPAAAR 487
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
594-662 |
7.41e-07 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 49.41 E-value: 7.41e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070839 594 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEP 662
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
560-643 |
7.61e-07 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 53.74 E-value: 7.61e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 560 TTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPT 639
Cdd:PRK12270 34 ADYGPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAV 113
|
....
gi 1907070839 640 TPKE 643
Cdd:PRK12270 114 EDEV 117
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
604-683 |
8.86e-07 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 53.36 E-value: 8.86e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 604 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKE 683
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
453-521 |
9.26e-07 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 53.26 E-value: 9.26e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070839 453 EPTTPKEPEPTTPKEPEPTTPK--EPEPTTPKEPEPTTlkePEPTtpkEPEPTtlkEPEPTTPKEPEPTTP 521
Cdd:PRK15313 559 EPDEPIIPDPVDPVIPDPVIPDpvDPDPVDPVIPDPVI---PDPV---DPDPV---DPEPVDPVIPDPTIP 620
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
571-695 |
9.39e-07 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 52.46 E-value: 9.39e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 571 EPEPTTPKEPEPTTPKE---PEPTTPKEPEPTTPKEPEPTTPKEPEPT-TPKEPEPTTPKEPEPTTPKKPEPTTPKEPEP 646
Cdd:NF040712 189 DPDFGRPLRPLATVPRLarePADARPEEVEPAPAAEGAPATDSDPAEAgTPDDLASARRRRAGVEQPEDEPVGPGAAPAA 268
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 1907070839 647 ttpkEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPT 695
Cdd:NF040712 269 ----EPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEP 313
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
451-593 |
9.39e-07 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 52.46 E-value: 9.39e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 451 EPEPTTPKEPEPTTPKE---PEPTTPKEPEPTTPKEPEPTTLKEPEPTTPkePEPTTLKEPEPTTPKEPEPTTPkEPEPT 527
Cdd:NF040712 189 DPDFGRPLRPLATVPRLarePADARPEEVEPAPAAEGAPATDSDPAEAGT--PDDLASARRRRAGVEQPEDEPV-GPGAA 265
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070839 528 TLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTP---KEPEPTTP 593
Cdd:NF040712 266 PAAEPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKpkrRRRRASVP 334
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
578-646 |
1.01e-06 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 49.02 E-value: 1.01e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070839 578 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEP 646
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
446-614 |
1.39e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 52.66 E-value: 1.39e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 446 STTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKE---------P 516
Cdd:PRK14948 374 PANPTPAPNPSPPPAPIQPSAPKTKQAATTPSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLNLEElwqqilaklE 453
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 517 EPTT-------------------------------PKEPEPTT---------------LKEPEPTTPKEPEPTTLKEPEP 550
Cdd:PRK14948 454 LPSTrmllsqqaelvsldsnraviavspnwlgmvqSRKPLLEQafakvlgrsiklnleSQSGSASNTAKTPPPPQKSPPP 533
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907070839 551 TTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPEP 614
Cdd:PRK14948 534 PAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPT-PSPTKDSSPEE 596
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
546-614 |
1.44e-06 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 48.63 E-value: 1.44e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070839 546 KEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 614
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
538-606 |
1.73e-06 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 48.63 E-value: 1.73e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070839 538 KEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 606
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
447-502 |
1.92e-06 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 48.25 E-value: 1.92e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070839 447 TTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEP 502
Cdd:pfam05887 54 TNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
572-689 |
2.01e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 52.02 E-value: 2.01e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 572 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPK 650
Cdd:PRK14951 376 AEKKTPARPEAAAPaAAPVAQAAAAPAPAAA--PAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPA 453
|
90 100 110
....*....|....*....|....*....|....*....
gi 1907070839 651 EPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTP 689
Cdd:PRK14951 454 QAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
524-649 |
2.53e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 51.64 E-value: 2.53e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 524 PEPTTLKEPEPTTP-KEPEPTTlkePEPTTPKEPEPTTTKEPesttrkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 602
Cdd:PRK14951 376 AEKKTPARPEAAAPaAAPVAQA---AAAPAPAAAPAAAASAP-------AAPPAAAPPAPVAAPAAAAPAAAPAAAPAAV 445
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 1907070839 603 EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTP 649
Cdd:PRK14951 446 ALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
530-598 |
2.57e-06 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 47.86 E-value: 2.57e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070839 530 KEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 598
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
|
|
| PRK10819 |
PRK10819 |
transport protein TonB; Provisional |
491-622 |
2.63e-06 |
|
transport protein TonB; Provisional
Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 50.07 E-value: 2.63e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 491 EPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPkEPEPTTLKEPEPTtPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRK 570
Cdd:PRK10819 36 HQVIELPAPAQPISVTMVAPADLEPPQAVQP-PPEPVVEPEPEPE-PIPEPPKEAPVVIPKPEPKPKPKPKPKPKPVKKV 113
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 1907070839 571 EPEPTtpKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPEP 622
Cdd:PRK10819 114 EEQPK--REVKPVEPRPASPFENTAPARPTSSTATAAASK-PVTSVSSGPRA 162
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
540-619 |
2.85e-06 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 51.81 E-value: 2.85e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 540 PEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 619
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
549-638 |
3.12e-06 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 51.72 E-value: 3.12e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 549 EPTTPKEPEPTTTKEPEsttrkePEPTTPKEPEPTTPKEPEPTTPKEPEPtTPKEPEPTTPKEPEPTTPKEPEPTTPkep 628
Cdd:PRK15313 559 EPDEPIIPDPVDPVIPD------PVIPDPVDPDPVDPVIPDPVIPDPVDP-DPVDPEPVDPVIPDPTIPDIGQSDTP--- 628
|
90
....*....|
gi 1907070839 629 ePTTPKKPEP 638
Cdd:PRK15313 629 -PITEHQFRP 637
|
|
| DUF4045 |
pfam13254 |
Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. ... |
598-751 |
3.16e-06 |
|
Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. This domain family is found in bacteria and eukaryotes, and is typically between 384 and 430 amino acids in length.
Pssm-ID: 433066 [Multi-domain] Cd Length: 415 Bit Score: 50.94 E-value: 3.16e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 598 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPePTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPE 677
Cdd:pfam13254 197 PNSFKEVTPVGLMRSPAPGGHSKSPSVSGISADSSPTKEEPSEEADT-LSTDKEQSPAPTSASEPPPKTKELPKDSEEPA 275
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070839 678 PTTPKEPEPTTPKEP--EPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTPASedsdDSKTTLKP 751
Cdd:pfam13254 276 APSKSAEASTEKKEPdtESSPETSSEKSAPSLLSPVSKASIDKPLSSPDRDPLSPKPKPQSPPK----DFRANLRS 347
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
561-667 |
3.33e-06 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 51.00 E-value: 3.33e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 561 TKEPESTTRKEPEPTTPKEPEPTTPKEPEPttPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT--PKKPEP 638
Cdd:COG3266 255 LKAPSQASSASAPATTSLGEQQEVSLPPAV--AAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPTAakPVVTET 332
|
90 100 110
....*....|....*....|....*....|
gi 1907070839 639 TTPKEPEP-TTPKEPEPTTPKEPEPTTPKE 667
Cdd:COG3266 333 AAPAAPAPeAAAAAAAPAAPAVAKKLAADE 362
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
506-582 |
3.46e-06 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 47.48 E-value: 3.46e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070839 506 KEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPesttrkEPEPTTPKEPEP 582
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP------EPEPEPEPEPEP 111
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
574-697 |
3.52e-06 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 51.14 E-value: 3.52e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 574 PTTPKEPEPTTPKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkkpEPTTPKEPEPTTPKEPE 653
Cdd:PRK07764 386 GVAGGAGAPAAAAPSAAAAAPAAAPA-PAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSP---AGNAPAGGAPSPPPAAA 461
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 1907070839 654 PTTPKEPEPTTPkePEPTTRKEPEPTTPKEPEPTTPKEPEPTTP 697
Cdd:PRK07764 462 PSAQPAPAPAAA--PEPTAAPAPAPPAAPAPAAAPAAPAAPAAP 503
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
552-645 |
3.53e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 50.96 E-value: 3.53e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 552 TPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKE-PE 629
Cdd:PRK14950 361 VPVPAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVrETATPPPVPPRPVAP--PVPHTPESAPKLTRAAiPV 438
|
90
....*....|....*.
gi 1907070839 630 PTTPKKPEPTTPKEPE 645
Cdd:PRK14950 439 DEKPKYTPPAPPKEEE 454
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
519-629 |
4.02e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 50.96 E-value: 4.02e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 519 TTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPT-TPKEPEPTTTKEPESTTRKEPEPTTPK-EPEPTTPKEPEPTTPkeP 596
Cdd:PRK14950 343 TTSYGQLPLELAVIEALLVPVPAPQPAKPTAAApSPVRPTPAPSTRPKAAAAANIPPKEPVrETATPPPVPPRPVAP--P 420
|
90 100 110
....*....|....*....|....*....|....
gi 1907070839 597 EPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKEPE 629
Cdd:PRK14950 421 VPHTPESAPKLTRAAiPVDEKPKYTPPAPPKEEE 454
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
533-630 |
4.12e-06 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 51.34 E-value: 4.12e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 533 EPTTPKEPEPTTLKEPEPTTPkepEPTttkepesttrkEPEPTTPKEPEPTTPKEPEPtTPKEPEPTTPKEPEPTTPKEP 612
Cdd:PRK15313 559 EPDEPIIPDPVDPVIPDPVIP---DPV-----------DPDPVDPVIPDPVIPDPVDP-DPVDPEPVDPVIPDPTIPDIG 623
|
90
....*....|....*...
gi 1907070839 613 EPTTPkepePTTPKEPEP 630
Cdd:PRK15313 624 QSDTP----PITEHQFRP 637
|
|
| PspC_subgroup_1 |
NF033838 |
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
505-650 |
4.30e-06 |
|
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 50.78 E-value: 4.30e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 505 LKEPEPTTPKEpEPTTPKEPEPttLKEP-EPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEpEPTTPKEPEPT 583
Cdd:NF033838 350 VKEAELELVKE-EAKEPRNEEK--IKQAkAKVESKKAEATRLEKIKTDRKKAEEEAKRKAAEEDKVKE-KPAEQPQPAPA 425
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907070839 584 TpkEPEPTTPKEPEPT-TPKEPEPTTPKEPEPTTPKEPEpttpkEPEPTTPKKPePTTPKEPEPTTPK 650
Cdd:NF033838 426 P--QPEKPAPKPEKPAeQPKAEKPADQQAEEDYARRSEE-----EYNRLTQQQP-PKTEKPAQPSTPK 485
|
|
| PspC_subgroup_1 |
NF033838 |
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
554-690 |
4.38e-06 |
|
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 50.78 E-value: 4.38e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 554 KEPEPTTTKEPESTTRKEPEPTTPKEPEPTtpKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 633
Cdd:NF033838 351 KEAELELVKEEAKEPRNEEKIKQAKAKVES--KKAEATRLEKIKTDRKKAEEEAKRKAAEEDKVKEKPAEQPQPAPAPQP 428
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 1907070839 634 KKPEPTTPKEPEPTTPKEPEPTTPKEPE-PTTPKEPEPTTRKEPePTTPKEPEPTTPK 690
Cdd:NF033838 429 EKPAPKPEKPAEQPKAEKPADQQAEEDYaRRSEEEYNRLTQQQP-PKTEKPAQPSTPK 485
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
558-653 |
4.53e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 50.96 E-value: 4.53e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 558 PTTTKEPESTTRKEPEPTTPKepepTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKK-P 636
Cdd:PRK14950 362 PVPAPQPAKPTAAAPSPVRPT----PAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAPKLTRAAiP 437
|
90
....*....|....*..
gi 1907070839 637 EPTTPKEPEPTTPKEPE 653
Cdd:PRK14950 438 VDEKPKYTPPAPPKEEE 454
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
556-659 |
4.66e-06 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 50.62 E-value: 4.66e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 556 PEPTTTKEPESTTRkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTtpkepePTTPKEPEPTTPKK 635
Cdd:COG3266 265 SAPATTSLGEQQEV-SLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPT------AAKPVVTETAAPAA 337
|
90 100
....*....|....*....|....*
gi 1907070839 636 PEP-TTPKEPEPTTPKEPEPTTPKE 659
Cdd:COG3266 338 PAPeAAAAAAAPAAPAVAKKLAADE 362
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
460-561 |
5.38e-06 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 51.04 E-value: 5.38e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 460 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTlkePEPTTPKE 539
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAA---APAAAAVE 114
|
90 100
....*....|....*....|....*..
gi 1907070839 540 PEPTTLKEPEPTTPKEPE-----PTTT 561
Cdd:PRK12270 115 DEVTPLRGAAAAVAKNMDaslevPTAT 141
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
508-605 |
5.76e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 50.58 E-value: 5.76e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 508 PEPTTPKEPEPTtPKEPEPTTLKEPEPTTPKEPEPttlKEPEPTTPkePEPTTTKEPESTtrkePEPTTPKEPEPTTPKE 587
Cdd:PRK14950 366 PQPAKPTAAAPS-PVRPTPAPSTRPKAAAAANIPP---KEPVRETA--TPPPVPPRPVAP----PVPHTPESAPKLTRAA 435
|
90
....*....|....*....
gi 1907070839 588 -PEPTTPKEPEPTTPKEPE 605
Cdd:PRK14950 436 iPVDEKPKYTPPAPPKEEE 454
|
|
| PRK10819 |
PRK10819 |
transport protein TonB; Provisional |
526-677 |
5.76e-06 |
|
transport protein TonB; Provisional
Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 48.91 E-value: 5.76e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 526 PTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESttrkEPEPTTpkEPEPTTPKePEPTTPKEPEPTTPKEPE 605
Cdd:PRK10819 36 HQVIELPAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEP----EPEPIP--EPPKEAPV-VIPKPEPKPKPKPKPKPK 108
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907070839 606 PTTPKEPEPTTPKEPepttpkePEPTTPKKPEPTTPKEPEPTTPkepePTTPKEPEPTTPKEPEPTTRKEPE 677
Cdd:PRK10819 109 PVKKVEEQPKREVKP-------VEPRPASPFENTAPARPTSSTA----TAAASKPVTSVSSGPRALSRNQPQ 169
|
|
| PRK10819 |
PRK10819 |
transport protein TonB; Provisional |
587-698 |
6.03e-06 |
|
transport protein TonB; Provisional
Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 48.91 E-value: 6.03e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 587 EPEPTTPKEPEPTT-----PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTtPKKPEPTTPKEPEPTTPKEPEPTTPKEPE 661
Cdd:PRK10819 36 HQVIELPAPAQPISvtmvaPADLEPPQAVQPPPEPVVEPEPEPEPIPEPP-KEAPVVIPKPEPKPKPKPKPKPKPVKKVE 114
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907070839 662 PTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPK 698
Cdd:PRK10819 115 EQPKREVKPVEPRPASPFENTAPARPTSSTATAAASK 151
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
548-665 |
6.39e-06 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 50.37 E-value: 6.39e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 548 PEPTTPKEPEPTTTKEPESTtrkEPEPTTPKEPEPTTPKEPEPTTPKEPEPttpkePEPTTPKEPEPTTPKEPEPTTPKE 627
Cdd:PRK07764 396 AAAPSAAAAAPAAAPAPAAA---APAAAAAPAPAAAPQPAPAPAPAPAPPS-----PAGNAPAGGAPSPPPAAAPSAQPA 467
|
90 100 110
....*....|....*....|....*....|....*...
gi 1907070839 628 PEPTTPkkPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 665
Cdd:PRK07764 468 PAPAAA--PEPTAAPAPAPPAAPAPAAAPAAPAAPAAP 503
|
|
| PHA03264 |
PHA03264 |
envelope glycoprotein D; Provisional |
591-696 |
6.58e-06 |
|
envelope glycoprotein D; Provisional
Pssm-ID: 223029 [Multi-domain] Cd Length: 416 Bit Score: 50.00 E-value: 6.58e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 591 TTPKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 670
Cdd:PHA03264 253 VVPPYFEESKGYEPPPA-PSGGSPAPPGDDRPEAKPEPGPVEDGAPGRETGGEGEGPEPAGRDGAAGGEPKPGPPRPAPD 331
|
90 100
....*....|....*....|....*..
gi 1907070839 671 TTRKEPEPTTPKEP-EPTTPKEPEPTT 696
Cdd:PHA03264 332 ADRPEGWPSLEAITfPPPTPATPAVPR 358
|
|
| MSCRAMM_ClfB |
NF033845 |
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial ... |
457-693 |
6.97e-06 |
|
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468203 [Multi-domain] Cd Length: 871 Bit Score: 50.33 E-value: 6.97e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 457 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTtlkePEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTT 536
Cdd:NF033845 543 PKDPTPGPPVDPEPSPEPEPEPTPDPEPSPD----PDPEPSPDPDPDSDSDSDSGSDSDSGSDSDSDSDSDSDSDSDSDS 618
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 537 PKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 616
Cdd:NF033845 619 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 698
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070839 617 PKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPE 693
Cdd:NF033845 699 SDSSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 775
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
580-744 |
7.33e-06 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 50.25 E-value: 7.33e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 580 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK---KPEPTTPKEPEPTTPKEPEPTT 656
Cdd:PRK07994 366 PEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSqllAARQQLQRAQGATKAKKSEPAA 445
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 657 PKEPEPtTPKEPEPTTRKEPEP-TTPKEPEPTTPKEPEPTTPkkpeptttspkTTTLKATTLAPKVTAPAEEIQNKPEET 735
Cdd:PRK07994 446 ASRARP-VNSALERLASVRPAPsALEKAPAKKEAYRWKATNP-----------VEVKKEPVATPKALKKALEHEKTPELA 513
|
....*....
gi 1907070839 736 TPASEDSDD 744
Cdd:PRK07994 514 AKLAAEAIE 522
|
|
| PRK10819 |
PRK10819 |
transport protein TonB; Provisional |
451-565 |
7.37e-06 |
|
transport protein TonB; Provisional
Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 48.53 E-value: 7.37e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 451 EPEPTTPKEPEPTTPKEPEPttpkEPEPTTPKE---PEPTTLKEPEPTTPKEPEPttLKEPEPTTPKEPEPTTPKEPEPT 527
Cdd:PRK10819 59 EPPQAVQPPPEPVVEPEPEP----EPIPEPPKEapvVIPKPEPKPKPKPKPKPKP--VKKVEEQPKREVKPVEPRPASPF 132
|
90 100 110
....*....|....*....|....*....|....*...
gi 1907070839 528 TLKEPEPTTPKEPEPTTLKePEPTTPKEPEPTTTKEPE 565
Cdd:PRK10819 133 ENTAPARPTSSTATAAASK-PVTSVSSGPRALSRNQPQ 169
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
532-627 |
7.42e-06 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 49.85 E-value: 7.42e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 532 PEPTTPKEPEPTTLkepEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTT--PKEPEPTTPKEPEP-TT 608
Cdd:COG3266 267 PATTSLGEQQEVSL---PPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPTAakPVVTETAAPAAPAPeAA 343
|
90
....*....|....*....
gi 1907070839 609 PKEPEPTTPKEPEPTTPKE 627
Cdd:COG3266 344 AAAAAPAAPAVAKKLAADE 362
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
569-665 |
7.62e-06 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 48.46 E-value: 7.62e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 569 RKEPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPt 647
Cdd:PRK11633 50 RDEPDMMPAaTQALPTQPPEGAAEAVRAGDAAAP-SLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQKVEA- 127
|
90
....*....|....*...
gi 1907070839 648 tPKEPEPTTPKEPEPTTP 665
Cdd:PRK11633 128 -PPAPKPEPKPVVEEKAA 144
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
451-593 |
7.89e-06 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 50.42 E-value: 7.89e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 451 EPEPTTPKEPEPTTPKEPEPTTPKEP----EPTTPKEPEPTTLKEPEPTTPkEPEPTTLKEPEPTTPKEPEPTTPKEPEp 526
Cdd:PRK10811 867 QPVVAEVPVAAAVEPVVSAPVVEAVAevveEPVVVAEPQPEEVVVVETTHP-EVIAAPVTEQPQVITESDVAVAQEVAE- 944
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907070839 527 ttlkEPEPTTPKEPEPTTLKEPEPTTPKEP-EPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTP 593
Cdd:PRK10811 945 ----HAEPVVEPQDETADIEEAAETAEVVVaEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQVPE 1008
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
454-745 |
8.32e-06 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 49.98 E-value: 8.32e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 454 PTTPKEPEPTTPKEPEPT---TPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTPKEPEPTtlk 530
Cdd:PRK07764 390 GAGAPAAAAPSAAAAAPAaapAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPS---PAGNAPAGGAPSPPPAAAPS--- 463
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 531 ePEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTP----------------KEPEPT--- 591
Cdd:PRK07764 464 -AQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAATLRERWPeilaavpkrsrktwaiLLPEATvlg 542
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 592 --------------------TPKEPE--------------------PTTPKEPEPTTPKEPEPTTPKE--PEPTTPKEPE 629
Cdd:PRK07764 543 vrgdtlvlgfstgglarrfaSPGNAEvlvtalaeelggdwqveavvGPAPGAAGGEGPPAPASSGPPEeaARPAAPAAPA 622
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 630 PTTPKKPePTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKE-PEPTTPKKPEPTTTSPK 708
Cdd:PRK07764 623 APAAPAP-AGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPaPAPAAPAAPAGAAPAQP 701
|
330 340 350
....*....|....*....|....*....|....*..
gi 1907070839 709 TTTLKATTLAPKVTAPAEEIQNKPEETTPASEDSDDS 745
Cdd:PRK07764 702 APAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDP 738
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
614-698 |
8.39e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 49.81 E-value: 8.39e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 614 PTTPKEPEPTTPKEPEPTTPKKP--EPTTPKEPEPTTPKEPEPTT-PKEPEPTTPKEPEPTTRKEPEPTTPKE--PEPTT 688
Cdd:PRK14950 362 PVPAPQPAKPTAAAPSPVRPTPApsTRPKAAAAANIPPKEPVRETaTPPPVPPRPVAPPVPHTPESAPKLTRAaiPVDEK 441
|
90
....*....|
gi 1907070839 689 PKEPEPTTPK 698
Cdd:PRK14950 442 PKYTPPAPPK 451
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
498-611 |
8.60e-06 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 49.85 E-value: 8.60e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 498 KEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTlkEPEPTTPKEPEPTTLkepePTTPkePEPTTTKEPESTTRKEPEPTTP 577
Cdd:COG3266 256 KAPSQASSASAPATTSLGEQQEVSLPPAVAA--QPAAAAAAQPSAVAL----PAAP--AAAAAAAAPAEAAAPQPTAAKP 327
|
90 100 110
....*....|....*....|....*....|....*
gi 1907070839 578 KEPEPTTPKEPEP-TTPKEPEPTTPKEPEPTTPKE 611
Cdd:COG3266 328 VVTETAAPAAPAPeAAAAAAAPAAPAVAKKLAADE 362
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
572-672 |
8.82e-06 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 48.08 E-value: 8.82e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 572 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPK 650
Cdd:PRK11633 45 PKPGDRDEPDMMPAaTQALPTQPPEGAAEAVRAGDAAAP-SLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQ 123
|
90 100
....*....|....*....|..
gi 1907070839 651 EPEPttPKEPEPTTPKEPEPTT 672
Cdd:PRK11633 124 KVEA--PPAPKPEPKPVVEEKA 143
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
538-643 |
9.62e-06 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 49.46 E-value: 9.62e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 538 KEPEPTTLKEPEPTTPKEPEPTTTKEPESttRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT--PKEPEPT 615
Cdd:COG3266 256 KAPSQASSASAPATTSLGEQQEVSLPPAV--AAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPTAakPVVTETA 333
|
90 100
....*....|....*....|....*....
gi 1907070839 616 TPKEPEP-TTPKEPEPTTPKKPEPTTPKE 643
Cdd:COG3266 334 APAAPAPeAAAAAAAPAAPAVAKKLAADE 362
|
|
| PRK10819 |
PRK10819 |
transport protein TonB; Provisional |
451-590 |
1.04e-05 |
|
transport protein TonB; Provisional
Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 48.14 E-value: 1.04e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 451 EPEPTTPKEPEPTT-------PKEPEPTTPKEPEPTTPKEPEPttlkEPEPTTPKePEPTTLKEPEPttpkEPEPTTPKE 523
Cdd:PRK10819 36 HQVIELPAPAQPISvtmvapaDLEPPQAVQPPPEPVVEPEPEP----EPIPEPPK-EAPVVIPKPEP----KPKPKPKPK 106
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070839 524 PEPttlKEPEPTTPKepepttlKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKePEPTTPKEPEP 590
Cdd:PRK10819 107 PKP---VKKVEEQPK-------REVKPVEPRPASPFENTAPARPTSSTATAAASK-PVTSVSSGPRA 162
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
579-728 |
1.06e-05 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 49.00 E-value: 1.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 579 EPEPTTPKEPEPTTPKE---PEPTTPKEPEPTTPKEPEPTTPKEPEPT-TPKEPEPTTPKKPEPTTPKEPEPTTPKEPEP 654
Cdd:NF040712 189 DPDFGRPLRPLATVPRLarePADARPEEVEPAPAAEGAPATDSDPAEAgTPDDLASARRRRAGVEQPEDEPVGPGAAPAA 268
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1907070839 655 ttpkEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPA-EEI 728
Cdd:NF040712 269 ----EPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKPKRRRRRASVPSwDDV 339
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
494-721 |
1.09e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 49.94 E-value: 1.09e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 494 PTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTT-PKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEP 572
Cdd:PHA03247 255 PAPPPVVGEGADRAPETARGATGPPPPPEAAAPNGAAAPPDGVwGAALAGAPLALPAPPDPPPPAPAGDAEEEDDEDGAM 334
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 573 EPTTPKepepTTPKEPEPTT-PKEPEPTTpkepepTTPKEPEPTTPKEPEPttPKEPEPTTPKKPEPTTpKEPEPTTPKE 651
Cdd:PHA03247 335 EVVSPL----PRPRQHYPLGfPKRRRPTW------TPPSSLEDLSAGRHHP--KRASLPTRKRRSARHA-ATPFARGPGG 401
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907070839 652 PEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPT-TPKEPE-PTTPKKPEPTTTSPKTTTLKATTLAPKV 721
Cdd:PHA03247 402 DDQTRPAAPVPASVPTPAPTPVPASAPPPPATPLPSaEPGSDDgPAPPPERQPPAPATEPAPDDPDDATRKA 473
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
518-617 |
1.12e-05 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 48.08 E-value: 1.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 518 PTTPK---EPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEP--EPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTT 592
Cdd:PRK11633 42 PLVPKpgdRDEPDMMPAATQALPTQPPEGAAEAVRAGDAAAPslDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKP 121
|
90 100
....*....|....*....|....*
gi 1907070839 593 PKEPEPttPKEPEPTTPKEPEPTTP 617
Cdd:PRK11633 122 QQKVEA--PPAPKPEPKPVVEEKAA 144
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
509-606 |
1.25e-05 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 49.41 E-value: 1.25e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 509 EPTTPKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTlkePEPTTPK--EPEPTttkepesttrkEPEPTTPKEPEPTTPK 586
Cdd:PRK15313 559 EPDEPIIPDPVDPVIPDPVI---PDPVDPDPVDPVI---PDPVIPDpvDPDPV-----------DPEPVDPVIPDPTIPD 621
|
90 100
....*....|....*....|
gi 1907070839 587 EPEPTTPkepePTTPKEPEP 606
Cdd:PRK15313 622 IGQSDTP----PITEHQFRP 637
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
585-751 |
1.26e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 49.19 E-value: 1.26e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 585 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkePEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 664
Cdd:PRK14948 363 AFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATT--PSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLN 440
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 665 PKE---------PEPTTR-------------------------------KEPE------------------------PTT 680
Cdd:PRK14948 441 LEElwqqilaklELPSTRmllsqqaelvsldsnraviavspnwlgmvqsRKPLleqafakvlgrsiklnlesqsgsaSNT 520
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070839 681 PKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTPASEDSDDSKTTLKP 751
Cdd:PRK14948 521 AKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTKD 591
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
577-739 |
1.29e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 49.19 E-value: 1.29e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 577 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTT 656
Cdd:PRK14948 363 AFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATT--PSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLN 440
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 657 PKE---------PEPTT-------------------------------PKEPE------------------------PTT 672
Cdd:PRK14948 441 LEElwqqilaklELPSTrmllsqqaelvsldsnraviavspnwlgmvqSRKPLleqafakvlgrsiklnlesqsgsaSNT 520
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907070839 673 RKEPEPTTPKEPEP-TTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTPAS 739
Cdd:PRK14948 521 AKTPPPPQKSPPPPaPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSP 588
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
524-619 |
1.29e-05 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 49.08 E-value: 1.29e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 524 PEPTTLKEPEPTTPkEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTT--PKEPEPTTPKEPEP-TT 600
Cdd:COG3266 265 SAPATTSLGEQQEV-SLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPTAakPVVTETAAPAAPAPeAA 343
|
90
....*....|....*....
gi 1907070839 601 PKEPEPTTPKEPEPTTPKE 619
Cdd:COG3266 344 AAAAAPAAPAVAKKLAADE 362
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
552-662 |
1.37e-05 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 49.70 E-value: 1.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 552 TPKEPEPTTTKEPESttrkepEPTTPKEPEPTTPKEPEPTTPKEPEpTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPT 631
Cdd:PRK10263 739 GPHEPLFTPIVEPVQ------QPQQPVAPQQQYQQPQQPVAPQPQY-QQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPV 811
|
90 100 110
....*....|....*....|....*....|.
gi 1907070839 632 TPKkPEPTTPKEPEPTTPKEPEPTTPKEPEP 662
Cdd:PRK10263 812 APQ-PQYQQPQQPVAPQPQYQQPQQPVAPQP 841
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
452-547 |
1.44e-05 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 49.08 E-value: 1.44e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 452 PEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTT--PKEPEPTTPKEPEPTTL 529
Cdd:COG3266 265 SAPATTSLGEQQEV-SLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPTAakPVVTETAAPAAPAPEAA 343
|
90
....*....|....*....
gi 1907070839 530 K-EPEPTTPKEPEPTTLKE 547
Cdd:COG3266 344 AaAAAPAAPAVAKKLAADE 362
|
|
| PHA03369 |
PHA03369 |
capsid maturational protease; Provisional |
580-683 |
1.53e-05 |
|
capsid maturational protease; Provisional
Pssm-ID: 223061 [Multi-domain] Cd Length: 663 Bit Score: 49.23 E-value: 1.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 580 PEPTTPKEP--EPTTPKEPEP-TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEP-EPTTPKEPEPT 655
Cdd:PHA03369 354 TAPSRVLAAaaKVAVIAAPQThTGPADRQRPQRPDGIPYSVPARSPMTAYPPVPQFCGDPGLVSPYNPqSPGTSYGPEPV 433
|
90 100
....*....|....*....|....*...
gi 1907070839 656 TPKEPEPTTPKEPEPTTRKEPEPTTPKE 683
Cdd:PHA03369 434 GPVPPQPTNPYVMPISMANMVYPGHPQE 461
|
|
| PRK10819 |
PRK10819 |
transport protein TonB; Provisional |
595-699 |
1.63e-05 |
|
transport protein TonB; Provisional
Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 47.75 E-value: 1.63e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 595 EPEPTTPKEPEPTT-----PKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 669
Cdd:PRK10819 36 HQVIELPAPAQPISvtmvaPADLEPPQAVQPPPEPVVEPEPEPEPIPEPP-KEAPVVIPKPEPKPKPKPKPKPKPVKKVE 114
|
90 100 110
....*....|....*....|....*....|
gi 1907070839 670 PTTRKEPEPTTPKEPEPTTPKEPEPTTPKK 699
Cdd:PRK10819 115 EQPKREVKPVEPRPASPFENTAPARPTSST 144
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
564-677 |
1.73e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 48.94 E-value: 1.73e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 564 PESTTRKEPEPTTP---KEPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPT 639
Cdd:PRK14951 376 AEKKTPARPEAAAPaaaPVAQAAAAPAPAAAPAAAaSAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQA 455
|
90 100 110
....*....|....*....|....*....|....*...
gi 1907070839 640 TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPE 677
Cdd:PRK14951 456 APETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEE 493
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
550-657 |
1.76e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 48.94 E-value: 1.76e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 550 PTTPKEPEPTTTKEPESTTRKEPEPTTPKE----PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 625
Cdd:PRK14951 381 PARPEAAAPAAAPVAQAAAAPAPAAAPAAAasapAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQAAPETV 460
|
90 100 110
....*....|....*....|....*....|..
gi 1907070839 626 KEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTP 657
Cdd:PRK14951 461 AIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
548-669 |
1.82e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 48.94 E-value: 1.82e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 548 PEPTTPKEPEPtttkePESTTRKEPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 626
Cdd:PRK14951 376 AEKKTPARPEA-----AAPAAAPVAQAAAAPAPAAAPAAAaSAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPA 450
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 1907070839 627 EPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 669
Cdd:PRK14951 451 PPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEE 493
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
534-650 |
1.84e-05 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 47.30 E-value: 1.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 534 PTTPK---EPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPttpkepepttpkepEPTTPK 610
Cdd:PRK11633 42 PLVPKpgdRDEPDMMPAATQALPTQPPEGAAEAVRAGDAAAPSLDPATVAPPNTPVEPEP--------------APVEPP 107
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1907070839 611 EPEPTTPKEPEPTTPKEPEPTTPKKPEPtTPKEPEPTTPK 650
Cdd:PRK11633 108 KPKPVEKPKPKPKPQQKVEAPPAPKPEP-KPVVEEKAAPT 146
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
591-691 |
1.87e-05 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 48.69 E-value: 1.87e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 591 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTtpkkPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 670
Cdd:COG3266 265 SAPATTSLGEQQEVSLPPAVAAQPAAAAAAQPSAVALPAAP----AAAAAAAAPAEAAAPQPTAAKPVVTETAAPAAPAP 340
|
90 100
....*....|....*....|..
gi 1907070839 671 -TTRKEPEPTTPKEPEPTTPKE 691
Cdd:COG3266 341 eAAAAAAAPAAPAVAKKLAADE 362
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
452-526 |
2.01e-05 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 49.03 E-value: 2.01e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070839 452 PEPTTPKEPEPTTPK--EPEPTTPKEPEPTTPKEPEPTTLkEPEPTTPKEPEPTTLKEPEPTTPkepePTTPKEPEP 526
Cdd:PRK15313 566 PDPVDPVIPDPVIPDpvDPDPVDPVIPDPVIPDPVDPDPV-DPEPVDPVIPDPTIPDIGQSDTP----PITEHQFRP 637
|
|
| PRK08691 |
PRK08691 |
DNA polymerase III subunits gamma and tau; Validated |
453-646 |
2.03e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 48.94 E-value: 2.03e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 453 EPTTPKEPEPTtpkePEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKePEPTTLKEP 532
Cdd:PRK08691 387 KETAAKKPQPR----PEAETAQTPVQTASAAAMPSEGKTAGPVSNQENNDVPPWEDAPDEAQTAAGTAQT-SAKSIQTAS 461
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 533 EPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEP-ESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPttPKEPEPTTPKE 611
Cdd:PRK08691 462 EAETPPENQVSKNKAADNETDAPLSEVPSENPiQATPNDEAVETETFAHEAPAEPFYGYGFPDNDCP--PEDGAEIPPPD 539
|
170 180 190
....*....|....*....|....*....|....*.
gi 1907070839 612 PEPTTPKEP-EPTTPKEPEPTTPKkpEPTTPKEPEP 646
Cdd:PRK08691 540 WEHAAPADTaGGGADEEAEAGGIG--GNNTPSAPPP 573
|
|
| PTZ00441 |
PTZ00441 |
sporozoite surface protein 2 (SSP2); Provisional |
497-693 |
2.22e-05 |
|
sporozoite surface protein 2 (SSP2); Provisional
Pssm-ID: 240420 [Multi-domain] Cd Length: 576 Bit Score: 48.42 E-value: 2.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 497 PKEPEPTTLKEPEPTTPKEPEPTTPKE----PEPTT-LKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKE 571
Cdd:PTZ00441 283 PVEPEPLPVPAPVPPTPEDDNPRPTDDefavPNFNEgLDVPDNPQDPVPPPNEGKDGNPNEENLFPPGDDEVPDESNVPP 362
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 572 PEPTTP----KEPEPTTPKEPEPTTPKEPEpttpKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPT 647
Cdd:PTZ00441 363 NPPNVPggsnSEFSSDVENPPNPPNPDIPE----QEPNIPEDSNKEVPEDVPMEPEDDRDNNFNEPKKPENKGDGQNEPV 438
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907070839 648 TPK---------EPEPTT-PKEPEPTTPKEPEP-------TTRKEPEPTTPKEPEPTTPKEPE 693
Cdd:PTZ00441 439 IPKpldnerdqsNKNKQVnPGNRHNSEDRYTRPhgrnnenRNYNNKNSDIPKHPERSEHEQPE 501
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
462-566 |
2.36e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 48.27 E-value: 2.36e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 462 PTTPKEPEPTTPKEPEPTTPKepepttlkepepTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPE 541
Cdd:PRK14950 362 PVPAPQPAKPTAAAPSPVRPT------------PAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAP 429
|
90 100
....*....|....*....|....*.
gi 1907070839 542 PTTLKE-PEPTTPKEPEPTTTKEPES 566
Cdd:PRK14950 430 KLTRAAiPVDEKPKYTPPAPPKEEEK 455
|
|
| MSCRAMM_ClfB |
NF033845 |
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial ... |
490-751 |
2.41e-05 |
|
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468203 [Multi-domain] Cd Length: 871 Bit Score: 48.79 E-value: 2.41e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 490 KEPEPTTPKEPEPTTLKEPEPTTPKEPEPTtpKEPEPTTlkEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTR 569
Cdd:NF033845 544 KDPTPGPPVDPEPSPEPEPEPTPDPEPSPD--PDPEPSP--DPDPDSDSDSDSGSDSDSGSDSDSDSDSDSDSDSDSDSD 619
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 570 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTP 649
Cdd:NF033845 620 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 699
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 650 KEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQ 729
Cdd:NF033845 700 DSSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 779
|
250 260
....*....|....*....|...
gi 1907070839 730 NKPEETTPASEDSD-DSKTTLKP 751
Cdd:NF033845 780 SDSDSDSDSDSDSDsDSDSRVTP 802
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
469-553 |
2.47e-05 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 48.64 E-value: 2.47e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 469 EPTTPKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTlkePEPTTPKepepttPKEPEPTtlkEPEPTTPKEPEPTTLKEP 548
Cdd:PRK15313 559 EPDEPIIPDPVDPVIPDPVI---PDPVDPDPVDPVI---PDPVIPD------PVDPDPV---DPEPVDPVIPDPTIPDIG 623
|
....*
gi 1907070839 549 EPTTP 553
Cdd:PRK15313 624 QSDTP 628
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
596-697 |
2.49e-05 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 46.92 E-value: 2.49e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 596 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTPKKpEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRK 674
Cdd:PRK11633 45 PKPGDRDEPDMMPAaTQALPTQPPEGAAEAVRAGDAAAPSL-DPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQ 123
|
90 100
....*....|....*....|...
gi 1907070839 675 EPEPttPKEPEPTTPKEPEPTTP 697
Cdd:PRK11633 124 KVEA--PPAPKPEPKPVVEEKAA 144
|
|
| MSCRAMM_ClfB |
NF033845 |
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial ... |
450-748 |
2.80e-05 |
|
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468203 [Multi-domain] Cd Length: 871 Bit Score: 48.41 E-value: 2.80e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 450 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTL 529
Cdd:NF033845 544 KDPTPGPPVDPEPSPEPEPEPTPDPEPSPDPDPEPSPDPDPDSDSDSDSGSDSDSGSDSDSDSDSDSDSDSDSDSDSDSD 623
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 530 KEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 609
Cdd:NF033845 624 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSSD 703
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 610 KEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTP 689
Cdd:NF033845 704 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 783
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070839 690 KEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTPASEDSDDSKTT 748
Cdd:NF033845 784 SDSDSDSDSDSDSDSRVTPPNNEQKAPSNPKGEVNHSNKASKQHKTDALPETGDKSENT 842
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
533-745 |
2.84e-05 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 48.00 E-value: 2.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 533 EPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT-------PKEPE 605
Cdd:PLN03209 308 ETTAPLTPMEELLAKIPSQRVPPKESDAADGPKPVPTKPVTPEAPSPPIEEEPPQPKAVVPRPLSPYTayedlkpPTSPI 387
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 606 PTTPKEPEP------TTPKEPEPTTPKEPEPTT---PKKPEPTTPKEPEPTTP--KEPEPTTPKEPEPTTPKEPEPTTRK 674
Cdd:PLN03209 388 PTPPSSSPAssksvdAVAKPAEPDVVPSPGSASnvpEVEPAQVEAKKTRPLSPyaRYEDLKPPTSPSPTAPTGVSPSVSS 467
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907070839 675 EP-EPTTPKEPEPTTPKEPE-PTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTPASEDSDDS 745
Cdd:PLN03209 468 TSsVPAVPDTAPATAATDAAaPPPANMRPLSPYAVYDDLKPPTSPSPAAPVGKVAPSSTNEVVKVGNSAPPTA 540
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
436-630 |
2.95e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 48.31 E-value: 2.95e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 436 PEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKE 515
Cdd:PRK07003 428 AAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAV 507
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 516 PEPTTPKEPEpttlKEPEPTTPKEPEPTTlKEPEPTTPKEPEPTTTKEPE-----------STTRKEPEPTTPKePEPTT 584
Cdd:PRK07003 508 PDARAPAAAS----REDAPAAAAPPAPEA-RPPTPAAAAPAARAGGAAAAldvlrnagmrvSSDRGARAAAAAK-PAAAP 581
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1907070839 585 PKEPEPTTPKEPEPT-TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 630
Cdd:PRK07003 582 AAAPKPAAPRVAVQVpTPRARAATGDAPPNGAARAEQAAESRGAPPP 628
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
452-563 |
3.02e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 48.17 E-value: 3.02e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 452 PEPTTPKEPEPTTP---KEPEPTTPKEPEPTTPKE----PEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEP 524
Cdd:PRK14951 376 AEKKTPARPEAAAPaaaPVAQAAAAPAPAAAPAAAasapAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQA 455
|
90 100 110
....*....|....*....|....*....|....*....
gi 1907070839 525 EPTTLKEPEPTTPkEPEPTTLKEPEPTTPKEPEPTTTKE 563
Cdd:PRK14951 456 APETVAIPVRVAP-EPAVASAAPAPAAAPAAARLTPTEE 493
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
588-690 |
3.37e-05 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 46.53 E-value: 3.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 588 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 666
Cdd:PRK11633 45 PKPGDRDEPDMMPAaTQALPTQPPEGAAEAVRAGDAAAP-SLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQ 123
|
90 100
....*....|....*....|....
gi 1907070839 667 EPEPTTRKEPEPtTPKEPEPTTPK 690
Cdd:PRK11633 124 KVEAPPAPKPEP-KPVVEEKAAPT 146
|
|
| PHA03369 |
PHA03369 |
capsid maturational protease; Provisional |
556-674 |
3.41e-05 |
|
capsid maturational protease; Provisional
Pssm-ID: 223061 [Multi-domain] Cd Length: 663 Bit Score: 48.07 E-value: 3.41e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 556 PEPTTTKEPesttrkEPEPTTPKEPEP-TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP-EPTTP 633
Cdd:PHA03369 354 TAPSRVLAA------AAKVAVIAAPQThTGPADRQRPQRPDGIPYSVPARSPMTAYPPVPQFCGDPGLVSPYNPqSPGTS 427
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 1907070839 634 KKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRK 674
Cdd:PHA03369 428 YGPEPVGPVPPQPTNPYVMPISMANMVYPGHPQEHGHERKR 468
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
452-541 |
3.41e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 47.88 E-value: 3.41e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 452 PEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKEPEPTTLKePEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKE-PEPTTLK 530
Cdd:PRK14950 366 PQPAKPTAAAPS-PVRPTPAPSTRPKAAAAANIPPKEPV-RETATPPPVPPRPVAPPVPHTPESAPKLTRAAiPVDEKPK 443
|
90
....*....|.
gi 1907070839 531 EPEPTTPKEPE 541
Cdd:PRK14950 444 YTPPAPPKEEE 454
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
428-693 |
3.59e-05 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 47.65 E-value: 3.59e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 428 PEPTTTKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTT--PKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTL 505
Cdd:pfam17823 121 SSPSSAAQSLPAAIAALPSEAFSAPRAAACRANASAAPRAAIAAAsaPHAASPAPRTAASSTTAASSTTAASSAPTTAAS 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 506 KEPEPTTPKEPEPTTPK---EPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEP 582
Cdd:pfam17823 201 SAPATLTPARGISTAATatgHPAAGTALAAVGNSSPAAGTVTAAVGTVTPAALATLAAAAGTVASAAGTINMGDPHARRL 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 583 TTPKE-PEPTTPKEPEPTTPKEPEPTTPK----EPEPTTPKEPEPT-TPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTT 656
Cdd:pfam17823 281 SPAKHmPSDTMARNPAAPMGAQAQGPIIQvstdQPVHNTAGEPTPSpSNTTLEPNTPKSVASTNLAVVTTTKAQAKEPSA 360
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 1907070839 657 PKEPEPTTPKEPE-----PTTRKEPEPTTPKEPEPTTPKEPE 693
Cdd:pfam17823 361 SPVPVLHTSMIPEveatsPTTQPSPLLPTQGAAGPGILLAPE 402
|
|
| Pneumo_att_G |
pfam05539 |
Pneumovirinae attachment membrane glycoprotein G; |
477-661 |
3.65e-05 |
|
Pneumovirinae attachment membrane glycoprotein G;
Pssm-ID: 114270 [Multi-domain] Cd Length: 408 Bit Score: 47.35 E-value: 3.65e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 477 EPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEP 556
Cdd:pfam05539 167 EPKTAVTTSKTTSWPTEVSHPTYPSQVTPQSQPATQGHQTATANQRLSSTEPVGTQGTTTSSNPEPQTEPPPSQRGPSGS 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 557 --EPTTTKEPESTTRKEPEPTTPKepePTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTtpkePEPTTPKEPEPTTPK 634
Cdd:pfam05539 247 pqHPPSTTSQDQSTTGDGQEHTQR---RKTP--PATSNRRSPHSTATPPPTTKRQETGRPT----PRPTATTQSGSSPPH 317
|
170 180
....*....|....*....|....*..
gi 1907070839 635 KPEPTTPKEPEPTTPKEPEPTTPKEPE 661
Cdd:pfam05539 318 SSPPGVQANPTTQNLVDCKELDPPKPN 344
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
446-696 |
3.84e-05 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 47.65 E-value: 3.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 446 STTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTlkepePTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPE 525
Cdd:pfam17823 173 PAPRTAASSTTAASSTTAASSAPTTAASSAPATLTPARGISTA-----ATATGHPAAGTALAAVGNSSPAAGTVTAAVGT 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 526 PT-----TLKEPEPTTPKEPEPTTLKEPEPTTPKE----PEPTTTKEPESTTRKEPEPTTPK----EPEPTTPKEPEPT- 591
Cdd:pfam17823 248 VTpaalaTLAAAAGTVASAAGTINMGDPHARRLSPakhmPSDTMARNPAAPMGAQAQGPIIQvstdQPVHNTAGEPTPSp 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 592 TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPE-----PTTPKEPEPTTPKEPEPTTPKEPEPTTPK 666
Cdd:pfam17823 328 SNTTLEPNTPKSVASTNLAVVTTTKAQAKEPSASPVPVLHTSMIPEveatsPTTQPSPLLPTQGAAGPGILLAPEQVATE 407
|
250 260 270
....*....|....*....|....*....|
gi 1907070839 667 EPEPTTRKEPEPTTPKEPEPTTPKEPEPTT 696
Cdd:pfam17823 408 ATAGTASAGPTPRSSGDPKTLAMASCQLST 437
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
497-622 |
4.48e-05 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 47.77 E-value: 4.48e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 497 PKEPEPTTLKEPEPTTPKEPEPTTPKEP--EPTTLKEPEPTTPKEPEPTTLKEPEPTTPkepePTTTKEPESTTRKEPEP 574
Cdd:PRK10263 716 PAGANPFSLDDFEFSPMKALLDDGPHEPlfTPIVEPVQQPQQPVAPQQQYQQPQQPVAP----QPQYQQPQQPVAPQPQY 791
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 1907070839 575 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP--EPTTPKEPEP 622
Cdd:PRK10263 792 QQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQyqQPQQPVAPQP 841
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
508-625 |
4.54e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 47.40 E-value: 4.54e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 508 PEPTTPKEPEPTTP-KEPEPTTlkePEPTTPKEPEPTTLKEP-EPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTP 585
Cdd:PRK14951 376 AEKKTPARPEAAAPaAAPVAQA---AAAPAPAAAPAAAASAPaAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPP 452
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1907070839 586 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 625
Cdd:PRK14951 453 AQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
460-560 |
4.69e-05 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 46.15 E-value: 4.69e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 460 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTLKEPEPTTPkEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPK 538
Cdd:PRK11633 45 PKPGDRDEPDMMPAaTQALPTQPPEGAAEAVRAGDAAAP-SLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQ 123
|
90 100
....*....|....*....|..
gi 1907070839 539 EPEPTTlkEPEPTTPKEPEPTT 560
Cdd:PRK11633 124 KVEAPP--APKPEPKPVVEEKA 143
|
|
| PRK13042 |
PRK13042 |
superantigen-like protein SSL4; Reviewed; |
599-682 |
4.89e-05 |
|
superantigen-like protein SSL4; Reviewed;
Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 46.55 E-value: 4.89e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 599 TTPKEPEPTTPKEPEPTTPKEPEPTT-PKEPEPttpkKPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKepEPTTRKEP 676
Cdd:PRK13042 23 TTTQAANATTPSSTKVEAPQSTPPSTkVEAPQS----KPNATTPPSTKVEAPQQtPNATTPSSTKVETPQ--SPTTKQVP 96
|
....*.
gi 1907070839 677 EPTTPK 682
Cdd:PRK13042 97 TEINPK 102
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
478-581 |
5.05e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 47.50 E-value: 5.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 478 PTTPKEPEPTTLKEPEPTTPKePEPTTlkepePTTPKEPEPTTPKEPEPTTlKEPEPTTPKEPEPttlkePEPTTPKEPE 557
Cdd:PRK14950 362 PVPAPQPAKPTAAAPSPVRPT-PAPST-----RPKAAAAANIPPKEPVRET-ATPPPVPPRPVAP-----PVPHTPESAP 429
|
90 100
....*....|....*....|....*
gi 1907070839 558 PTTTKE-PESTTRKEPEPTTPKEPE 581
Cdd:PRK14950 430 KLTRAAiPVDEKPKYTPPAPPKEEE 454
|
|
| PRK10905 |
PRK10905 |
cell division protein DamX; Validated |
583-698 |
5.31e-05 |
|
cell division protein DamX; Validated
Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 46.85 E-value: 5.31e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 583 TTPKEPEPTTPKEPEPTTPKEPEPTTP------KEPEPTTPKEPEPTTPKEPEPTT---PKKPEPTTPKEPEPT--TPKE 651
Cdd:PRK10905 106 TQPQNQQQLNNVAVNSTLPTEPATVAPvrngnaSRQTAKTQTAERPATTRPARKQAviePKKPQATAKTEPKPVaqTPKR 185
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 1907070839 652 PEPTTPKEPepttPKEPEPTTRKEPEPTTPKEPEPT-TPKEPEPTTPK 698
Cdd:PRK10905 186 TEPAAPVAS----TKAPAATSTPAPKETATTAPVQTaSPAQTTATPAA 229
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
518-613 |
5.46e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 47.11 E-value: 5.46e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 518 PTTPKEPEPTTLKEPEPTTPK--EPEPTTLKEPEPTTPKEPEPTTTKEPESTtrkePEPTTPkePEPTTPKEPEPTTPKE 595
Cdd:PRK14950 362 PVPAPQPAKPTAAAPSPVRPTpaPSTRPKAAAAANIPPKEPVRETATPPPVP----PRPVAP--PVPHTPESAPKLTRAA 435
|
90
....*....|....*....
gi 1907070839 596 -PEPTTPKEPEPTTPKEPE 613
Cdd:PRK14950 436 iPVDEKPKYTPPAPPKEEE 454
|
|
| dnaA |
PRK14086 |
chromosomal replication initiator protein DnaA; |
507-695 |
5.48e-05 |
|
chromosomal replication initiator protein DnaA;
Pssm-ID: 237605 [Multi-domain] Cd Length: 617 Bit Score: 47.13 E-value: 5.48e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 507 EPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKE-PESTTRKEPEPtTPKEPEPTTP 585
Cdd:PRK14086 89 DPSAGEPAPPPPHARRTSEPELPRPGRRPYEGYGGPRADDRPPGLPRQDQLPTARPAyPAYQQRPEPGA-WPRAADDYGW 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 586 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpkKPEPTTPKEPEPTTPkEPEPTTPKEPE---- 661
Cdd:PRK14086 168 QQQRLGFPPRAPYASPASYAPEQERDREPYDAGRPEYDQRRRDYDHP--RPDWDRPRRDRTDRP-EPPPGAGHVHRggpg 244
|
170 180 190
....*....|....*....|....*....|....*
gi 1907070839 662 -PTTPKEPEPTTRKEPEPTTPKEPEPtTPKEPEPT 695
Cdd:PRK14086 245 pPERDDAPVVPIRPSAPGPLAAQPAP-APGPGEPT 278
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
452-740 |
6.05e-05 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 47.45 E-value: 6.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 452 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEP----TTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPT 527
Cdd:pfam03154 245 PHPPLQPMTQPPPPSQVSPQPLPQPSLHGQMPPMPHSLQTGPShmqhPVPPQPFPLTPQSSQSQVPPGPSPAAPGQSQQR 324
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 528 TLKEPEPTTPKEPEPTTlKEPEPTTPKePEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPT 607
Cdd:pfam03154 325 IHTPPSQSQLQSQQPPR-EQPLPPAPL-SMPHIKPPPTTPIPQLPNPQSHKHPPHLSGPSPFQMNSNLPPPPALKPLSSL 402
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 608 TPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPepttrkePEPTTPKEPEPT 687
Cdd:pfam03154 403 STHHPPSAHPPPLQLMPQSQQLPPPPAQPPVLTQSQSLPPPAASHPPTSGLHQVPSQSPFP-------QHPFVPGGPPPI 475
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 1907070839 688 TPKE-PEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTPASE 740
Cdd:pfam03154 476 TPPSgPPTSTSSAMPGIQPPSSASVSSSGPVPAAVSCPLPPVQIKEEALDEAEE 529
|
|
| PHA03264 |
PHA03264 |
envelope glycoprotein D; Provisional |
575-684 |
6.15e-05 |
|
envelope glycoprotein D; Provisional
Pssm-ID: 223029 [Multi-domain] Cd Length: 416 Bit Score: 46.92 E-value: 6.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 575 TTPKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEP 654
Cdd:PHA03264 253 VVPPYFEESKGYEPPPA-PSGGSPAPPGDDRPEAKPEPGPVEDGAPGRETGGEGEGPEPAGRDGAAGGEPKPGPPRPAPD 331
|
90 100 110
....*....|....*....|....*....|
gi 1907070839 655 TTPKEPEPTTPKEPEPTtrkePEPTTPKEP 684
Cdd:PHA03264 332 ADRPEGWPSLEAITFPP----PTPATPAVP 357
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
550-738 |
6.15e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 47.18 E-value: 6.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 550 PTTPKEPEPTTTKEPESTTRKEPEPTTPkepEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 629
Cdd:PRK12323 375 ATAAAAPVAQPAPAAAAPAAAAPAPAAP---PAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPA 451
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 630 PTTPKKPEPTTPKEPEPttpkePEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKT 709
Cdd:PRK12323 452 PAPAAAPAAAARPAAAG-----PRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESI 526
|
170 180
....*....|....*....|....*....
gi 1907070839 710 TTLKATTLAPKVTAPAEEIQNKPEETTPA 738
Cdd:PRK12323 527 PDPATADPDDAFETLAPAPAAAPAPRAAA 555
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
493-571 |
6.49e-05 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 47.10 E-value: 6.49e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 493 EPTTPKEPEPTTLKEPEPTTPK--EPEPTTPKEPEPtTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRK 570
Cdd:PRK15313 559 EPDEPIIPDPVDPVIPDPVIPDpvDPDPVDPVIPDP-VIPDPVDPDPVDPEPVDPVIPDPTIPDIGQSDTPPITEHQFRP 637
|
.
gi 1907070839 571 E 571
Cdd:PRK15313 638 E 638
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
532-611 |
6.53e-05 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 47.19 E-value: 6.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 532 PEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 611
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
454-549 |
7.68e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 46.73 E-value: 7.68e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 454 PTTPKEPEPTTPKEPEPTTPKePEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKePEPTTPkePEPTTPKEPEPTTLKE-P 532
Cdd:PRK14950 362 PVPAPQPAKPTAAAPSPVRPT-PAPSTRPKAAAAANIPPKEPVRETATPPPVP-PRPVAP--PVPHTPESAPKLTRAAiP 437
|
90
....*....|....*..
gi 1907070839 533 EPTTPKEPEPTTLKEPE 549
Cdd:PRK14950 438 VDEKPKYTPPAPPKEEE 454
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
468-571 |
8.81e-05 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 46.38 E-value: 8.81e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 468 PEPTTPKEPEPTTPkEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKepepttPKEPEPTTLKE 547
Cdd:COG3266 265 SAPATTSLGEQQEV-SLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPTAAK------PVVTETAAPAA 337
|
90 100
....*....|....*....|....*
gi 1907070839 548 PEP-TTPKEPEPTTTKEPESTTRKE 571
Cdd:COG3266 338 PAPeAAAAAAAPAAPAVAKKLAADE 362
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
451-571 |
8.93e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 46.78 E-value: 8.93e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 451 EPEPTTPKEPEPTTP--KEPEPTTPKEPEPTTPKEPEPTTlKEPEPTTPKEPEPTTLkePEPTTPKEPEPTTPKEPEPTt 528
Cdd:PRK07994 414 PLPETTSQLLAARQQlqRAQGATKAKKSEPAAASRARPVN-SALERLASVRPAPSAL--EKAPAKKEAYRWKATNPVEV- 489
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 1907070839 529 lKEPEPTTPKEPEPTTLKEpepttpKEPEPTTTKEPESTTRKE 571
Cdd:PRK07994 490 -KKEPVATPKALKKALEHE------KTPELAAKLAAEAIERDP 525
|
|
| PRK14949 |
PRK14949 |
DNA polymerase III subunits gamma and tau; Provisional |
450-604 |
9.21e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237863 [Multi-domain] Cd Length: 944 Bit Score: 46.64 E-value: 9.21e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 450 KEPEP-TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPE--PTTLKEPEPTTPKEPEPTTPKEPEP 526
Cdd:PRK14949 637 KKSSAdRKPKTPPSRAPPASLSKPASSPDASQTSASFDLDPDFELATHQSVPEaaLASGSAPAPPPVPDPYDRPPWEEAP 716
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907070839 527 TTlkEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTtkEPESTtrkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 604
Cdd:PRK14949 717 EV--ASANDGPNNAAEGNLSESVEDASNSELQAV--EQQAT----HQPQVQAEAQSPASTTALTQTSSEVQDTELNLV 786
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
599-697 |
9.52e-05 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 46.38 E-value: 9.52e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 599 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPttpkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEP 678
Cdd:COG3266 265 SAPATTSLGEQQEVSLPPAVAAQPAAAAAAQPSAVALPAA----PAAAAAAAAPAEAAAPQPTAAKPVVTETAAPAAPAP 340
|
90 100
....*....|....*....|
gi 1907070839 679 -TTPKEPEPTTPKEPEPTTP 697
Cdd:COG3266 341 eAAAAAAAPAAPAVAKKLAA 360
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
513-646 |
1.08e-04 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 46.62 E-value: 1.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 513 PKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPtttkEPESTTRKEPEPTTPKEPEPttpKEPEPTT 592
Cdd:PRK10263 716 PAGANPFSLDDFEFSPMKALLDDGPHEPLFTPIVEPVQQPQQPVAP----QQQYQQPQQPVAPQPQYQQP---QQPVAPQ 788
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 1907070839 593 PKEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKKPEPTTPKEPEP 646
Cdd:PRK10263 789 PQYQQPQQPVAPQPQYQQPQQPVAP-QPQYQQPQQPVAPQPQYQQPQQPVAPQP 841
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
449-544 |
1.15e-04 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 44.99 E-value: 1.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 449 RKEPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPT 527
Cdd:PRK11633 50 RDEPDMMPAaTQALPTQPPEGAAEAVRAGDAAAP-SLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQKVEAP 128
|
90
....*....|....*..
gi 1907070839 528 TlkEPEPTTPKEPEPTT 544
Cdd:PRK11633 129 P--APKPEPKPVVEEKA 143
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
451-604 |
1.21e-04 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 46.57 E-value: 1.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 451 EPEPTTpkEPEPTTPKEPEPTTPKEPEPTTPKE-PEPTTLKEPEPTTPKEPEPTTLKEPEPTTPkEPEPTTPKEPEPTTL 529
Cdd:PRK10811 883 VSAPVV--EAVAEVVEEPVVVAEPQPEEVVVVEtTHPEVIAAPVTEQPQVITESDVAVAQEVAE-HAEPVVEPQDETADI 959
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907070839 530 KEPEPTTPKEP-EPTTLKEPEpttpkEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTP--KEPEPTTPKEP 604
Cdd:PRK10811 960 EEAAETAEVVVaEPEVVAQPA-----APVVAEVAAEVETVTAVEPEVAPAQVPEATVEHNHATAPmtRAPAPEYVPEA 1032
|
|
| Pneumo_att_G |
pfam05539 |
Pneumovirinae attachment membrane glycoprotein G; |
446-613 |
1.25e-04 |
|
Pneumovirinae attachment membrane glycoprotein G;
Pssm-ID: 114270 [Multi-domain] Cd Length: 408 Bit Score: 45.81 E-value: 1.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 446 STTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEP----EPTTPKEPePTTP 521
Cdd:pfam05539 176 KTTSWPTEVSHPTYPSQVTPQSQPATQGHQTATANQRLSSTEPVGTQGTTTSSNPEPQTEPPPsqrgPSGSPQHP-PSTT 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 522 KEPEPTTLKEPEpTTPKEPEPTTLKEPEPTTPKEPEPTTTKEpESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 601
Cdd:pfam05539 255 SQDQSTTGDGQE-HTQRRKTPPATSNRRSPHSTATPPPTTKR-QETGRPTPRPTATTQSGSSPPHSSPPGVQANPTTQNL 332
|
170
....*....|..
gi 1907070839 602 KEPEPTTPKEPE 613
Cdd:pfam05539 333 VDCKELDPPKPN 344
|
|
| PRK13042 |
PRK13042 |
superantigen-like protein SSL4; Reviewed; |
566-650 |
1.31e-04 |
|
superantigen-like protein SSL4; Reviewed;
Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 45.39 E-value: 1.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 566 STTRKEPEPTTPKEPEPTTPKEPEPTT-PKEPEPTtpkePEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKkpEPTTPKE 643
Cdd:PRK13042 22 TTTTQAANATTPSSTKVEAPQSTPPSTkVEAPQSK----PNATTPPSTKVEAPQQtPNATTPSSTKVETPQ--SPTTKQV 95
|
....*..
gi 1907070839 644 PEPTTPK 650
Cdd:PRK13042 96 PTEINPK 102
|
|
| PRK12757 |
PRK12757 |
cell division protein FtsN; Provisional |
541-621 |
1.33e-04 |
|
cell division protein FtsN; Provisional
Pssm-ID: 237191 [Multi-domain] Cd Length: 256 Bit Score: 45.03 E-value: 1.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 541 EPTTLKE-PE-PTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 618
Cdd:PRK12757 98 QPTQLSEvPYnEQTPQVPRSTVQIQQQAQQQQPPATTAQPQPVTPPRQTTAPVQPQTPAPVRTQPAAPVTQAVEAPKVEA 177
|
...
gi 1907070839 619 EPE 621
Cdd:PRK12757 178 EKE 180
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
508-587 |
1.34e-04 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 46.42 E-value: 1.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 508 PEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKE 587
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
446-525 |
1.42e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 45.96 E-value: 1.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 446 STTRKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKE-PEPTTPKEPEPTTPKEP 524
Cdd:PRK14950 375 APSPVRPTPAPSTRPKAAAAANIPPKEPV-RETATPPPVPPRPVAPPVPHTPESAPKLTRAAiPVDEKPKYTPPAPPKEE 453
|
.
gi 1907070839 525 E 525
Cdd:PRK14950 454 E 454
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
527-587 |
1.46e-04 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 45.66 E-value: 1.46e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070839 527 TTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKE 587
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| PRK13042 |
PRK13042 |
superantigen-like protein SSL4; Reviewed; |
575-658 |
1.47e-04 |
|
superantigen-like protein SSL4; Reviewed;
Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 45.01 E-value: 1.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 575 TTPKEPEPTTPKEPEPTTPKEPEPTT-PKEPEPTtpkePEPTTPKEPEPTTPKE-PEPTTPKKPEPTTPKepEPTTPKEP 652
Cdd:PRK13042 23 TTTQAANATTPSSTKVEAPQSTPPSTkVEAPQSK----PNATTPPSTKVEAPQQtPNATTPSSTKVETPQ--SPTTKQVP 96
|
....*.
gi 1907070839 653 EPTTPK 658
Cdd:PRK13042 97 TEINPK 102
|
|
| PRK13042 |
PRK13042 |
superantigen-like protein SSL4; Reviewed; |
559-642 |
1.50e-04 |
|
superantigen-like protein SSL4; Reviewed;
Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 45.01 E-value: 1.50e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 559 TTTKEPESTTRKEPEPTTPKEPEPTT-PKEPEPTtpkePEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKepEPTTPKKP 636
Cdd:PRK13042 23 TTTQAANATTPSSTKVEAPQSTPPSTkVEAPQSK----PNATTPPSTKVEAPQQtPNATTPSSTKVETPQ--SPTTKQVP 96
|
....*.
gi 1907070839 637 EPTTPK 642
Cdd:PRK13042 97 TEINPK 102
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
451-572 |
1.57e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 46.02 E-value: 1.57e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 451 EPEPTTPKEPEPTTP---KEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEP--TTPKEPEPTTPKEPE 525
Cdd:PRK12323 449 APAPAPAAAPAAAARpaaAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPaqPDAAPAGWVAESIPD 528
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 1907070839 526 PTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEP 572
Cdd:PRK12323 529 PATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPD 575
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
534-746 |
1.72e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 45.93 E-value: 1.72e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 534 PTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 613
Cdd:PHA03307 25 PATPGDAADDLLSGSQGQLVSDSAELAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREG 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 614 pttpkEPEPTTPkEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPE 693
Cdd:PHA03307 105 -----SPTPPGP-SSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSS 178
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 1907070839 694 PTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTPASEDSDDSK 746
Cdd:PHA03307 179 PEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADD 231
|
|
| PRK13108 |
PRK13108 |
prolipoprotein diacylglyceryl transferase; Reviewed |
553-694 |
1.73e-04 |
|
prolipoprotein diacylglyceryl transferase; Reviewed
Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 45.35 E-value: 1.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 553 PKEPEPTT-TKEPESTTRKEPEPTTPKEP-EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPEP 630
Cdd:PRK13108 295 ALEREPAElAAAAVASAASAVGPVGPGEPnQPDDVAEAVKAEVAEVTDEVAAESVVQVADRDGESTPA-VEETSEADIER 373
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070839 631 TTPKKPEPTTPKEPEPTTPKEPE-PTTPKEPEPTTPKEPEPTTRKEPEPTT-PKEPEPTTPKEPEP 694
Cdd:PRK13108 374 EQPGDLAGQAPAAHQVDAEAASAaPEEPAALASEAHDETEPEVPEKAAPIPdPAKPDELAVAGPGD 439
|
|
| Pneumo_att_G |
pfam05539 |
Pneumovirinae attachment membrane glycoprotein G; |
517-693 |
1.73e-04 |
|
Pneumovirinae attachment membrane glycoprotein G;
Pssm-ID: 114270 [Multi-domain] Cd Length: 408 Bit Score: 45.42 E-value: 1.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 517 EPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTpkepEPTTPKEP 596
Cdd:pfam05539 167 EPKTAVTTSKTTSWPTEVSHPTYPSQVTPQSQPATQGHQTATANQRLSSTEPVGTQGTTTSSNPEPQT----EPPPSQRG 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 597 EPTTPKEPePTTPkEPEPTTPKEPEPTTPKEPEPTTPKKP-EPTTPKEPEPTTPKE------PEPTTPKEPEPTTPKEPE 669
Cdd:pfam05539 243 PSGSPQHP-PSTT-SQDQSTTGDGQEHTQRRKTPPATSNRrSPHSTATPPPTTKRQetgrptPRPTATTQSGSSPPHSSP 320
|
170 180
....*....|....*....|....
gi 1907070839 670 PTTRKEPEPTTPKEPEPTTPKEPE 693
Cdd:pfam05539 321 PGVQANPTTQNLVDCKELDPPKPN 344
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
596-697 |
1.92e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 45.48 E-value: 1.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 596 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPkePEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP--KEPEPTT 672
Cdd:PRK14951 376 AEKKTPARPEAAAPaAAPVAQAAAAPAPAAA--PAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAvaLAPAPPA 453
|
90 100
....*....|....*....|....*...
gi 1907070839 673 RKEPEPTTPK---EPEPTTPKEPEPTTP 697
Cdd:PRK14951 454 QAAPETVAIPvrvAPEPAVASAAPAPAA 481
|
|
| PRK08691 |
PRK08691 |
DNA polymerase III subunits gamma and tau; Validated |
446-622 |
2.02e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 45.47 E-value: 2.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 446 STTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKePEPTTLKEPEPTTPKEPEPTTPKEPE 525
Cdd:PRK08691 400 AETAQTPVQTASAAAMPSEGKTAGPVSNQENNDVPPWEDAPDEAQTAAGTAQT-SAKSIQTASEAETPPENQVSKNKAAD 478
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 526 pttlKEPEPTTPKEPEPTtlkePEPTTP-KEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKE-PEPTTPKE 603
Cdd:PRK08691 479 ----NETDAPLSEVPSEN----PIQATPnDEAVETETFAHEAPAEPFYGYGFPDNDCPPEDGAEIPPPDWEhAAPADTAG 550
|
170 180
....*....|....*....|...
gi 1907070839 604 PEPTTPKEP----EPTTPKEPEP 622
Cdd:PRK08691 551 GGADEEAEAggigGNNTPSAPPP 573
|
|
| PRK10819 |
PRK10819 |
transport protein TonB; Provisional |
611-732 |
2.04e-04 |
|
transport protein TonB; Provisional
Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 44.29 E-value: 2.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 611 EPEPTTPKEPEPTT-----PKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTRKEPEpttPKEP 684
Cdd:PRK10819 36 HQVIELPAPAQPISvtmvaPADLEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPvVIPKPEPKPKPKPKPKPK---PVKK 112
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 1907070839 685 EPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKP 732
Cdd:PRK10819 113 VEEQPKREVKPVEPRPASPFENTAPARPTSSTATAAASKPVTSVSSGP 160
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
559-619 |
2.05e-04 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 44.89 E-value: 2.05e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070839 559 TTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 619
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
565-740 |
2.26e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 45.25 E-value: 2.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 565 ESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEP 644
Cdd:PRK12323 371 GAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAP 450
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 645 EPTTPKEPEPTTP---KEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKV 721
Cdd:PRK12323 451 APAPAAAPAAAARpaaAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPA 530
|
170
....*....|....*....
gi 1907070839 722 TAPAEEIQNKPEETTPASE 740
Cdd:PRK12323 531 TADPDDAFETLAPAPAAAP 549
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
553-685 |
2.29e-04 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 45.46 E-value: 2.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 553 PKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEpTTPKEPEPTTPKEPEPTTPKEPePTTPKEPEPTTPKEPEPTT 632
Cdd:PRK10263 716 PAGANPFSLDDFEFSPMKALLDDGPHEPLFTPIVEPV-QQPQQPVAPQQQYQQPQQPVAP-QPQYQQPQQPVAPQPQYQQ 793
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 1907070839 633 PKKPEPTTPKEPEPTTPKEPEpttPKEPEPTTPKEPEPTTRKEPEPTTPKEPE 685
Cdd:PRK10263 794 PQQPVAPQPQYQQPQQPVAPQ---PQYQQPQQPVAPQPQYQQPQQPVAPQPQD 843
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
560-627 |
2.98e-04 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 44.50 E-value: 2.98e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907070839 560 TTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 627
Cdd:TIGR00601 75 SKPKTGTGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
632-697 |
3.08e-04 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 44.50 E-value: 3.08e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070839 632 TPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTP 697
Cdd:TIGR00601 75 SKPKTGTGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVP 140
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
500-617 |
3.18e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 44.71 E-value: 3.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 500 PEPTTLKEPEPTTP-KEPEPTTPKEPEPTTlkePEPT-TPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTP 577
Cdd:PRK14951 376 AEKKTPARPEAAAPaAAPVAQAAAAPAPAA---APAAaASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPP 452
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1907070839 578 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 617
Cdd:PRK14951 453 AQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
568-633 |
3.25e-04 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 44.50 E-value: 3.25e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070839 568 TRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 633
Cdd:TIGR00601 75 SKPKTGTGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVP 140
|
|
| ftsN |
TIGR02223 |
cell division protein FtsN; FtsN is a poorly conserved protein active in cell division in a ... |
478-671 |
3.38e-04 |
|
cell division protein FtsN; FtsN is a poorly conserved protein active in cell division in a number of Proteobacteria. The N-terminal 30 residue region tends to by Lys/Arg-rich, and is followed by a membrane-spanning region. This is followed by an acidic low-complexity region of variable length and a well-conserved C-terminal domain of two tandem regions matched by pfam05036 (Sporulation related repeat), found in several cell division and sporulation proteins. The role of FtsN as a suppressor for other cell division mutations is poorly understood; it may involve cell wall hydrolysis. [Cellular processes, Cell division]
Pssm-ID: 274041 [Multi-domain] Cd Length: 298 Bit Score: 43.91 E-value: 3.38e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 478 PTTPKEPEPTTLKEPEpTTPKEPEPTTLKEPEPTTPKEpepttpkEPEPTTLKEPEPTTPKEP-EPTTLKEPEPTTPKEP 556
Cdd:TIGR02223 48 LTESKQANEPETLQPK-NQTENGETAADLPPKPEERWS-------YIEELEAREVLINDPEEPsNGGGVEESAQLTAEQR 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 557 EPTTTKEPESTTRKEPEPTTPKEPEpTTPKEPEPTTPKEPEPTTPKEPEPTTPKepepTTPKEPEPTTPKEPEPTTPKKP 636
Cdd:TIGR02223 120 QLLEQMQADMRAAEKVLATAPSEQT-VAVEARKQTAEKKPQKARTAEAQKTPVE----TEKIASKVKEAKQKQKALPKQT 194
|
170 180 190
....*....|....*....|....*....|....*
gi 1907070839 637 EPTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPT 671
Cdd:TIGR02223 195 AETQSNSKPIETA--PKADKADKTKPKPKEKAERA 227
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
556-745 |
3.66e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 44.93 E-value: 3.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 556 PEPTTTKEPESTtrKEPEPTTPKEPEPTTPKEPEPTTPKEPEP---------TTPKEPEPTTPKEPEPTTPKEPEPTTPK 626
Cdd:PHA03247 255 PAPPPVVGEGAD--RAPETARGATGPPPPPEAAAPNGAAAPPDgvwgaalagAPLALPAPPDPPPPAPAGDAEEEDDEDG 332
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 627 EPEPTTP---------------KKPEPTTPKEPEPTTPKEPEP---TTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTT 688
Cdd:PHA03247 333 AMEVVSPlprprqhyplgfpkrRRPTWTPPSSLEDLSAGRHHPkraSLPTRKRRSARHAATPFARGPGGDDQTRPAAPVP 412
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070839 689 PKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTPASEDSDDS 745
Cdd:PHA03247 413 ASVPTPAPTPVPASAPPPPATPLPSAEPGSDDGPAPPPERQPPAPATEPAPDDPDDA 469
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
484-601 |
3.81e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 44.71 E-value: 3.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 484 PEPTTLKEPEPTTP-KEPEPTTlkePEPTTPKEPEPT-TPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTT 561
Cdd:PRK14951 376 AEKKTPARPEAAAPaAAPVAQA---AAAPAPAAAPAAaASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPP 452
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1907070839 562 KEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 601
Cdd:PRK14951 453 AQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
|
|
| PRK14960 |
PRK14960 |
DNA polymerase III subunit gamma/tau; |
537-692 |
3.81e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237868 [Multi-domain] Cd Length: 702 Bit Score: 44.65 E-value: 3.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 537 PKEPEPTTLKEP-EPTTPKEP--EPTTTKEPESTTRKEPEPTT----PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 609
Cdd:PRK14960 360 PLAPNEILVSEPvQQNGQAEVglNSQAQTAQEITPVSAVQPVEvisqPAMVEPEPEPEPEPEPEPEPEPEPEPEPEPEPE 439
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 610 KEPEPT------TPKEPE----------PTTPKEPEPTTPKKPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPTT 672
Cdd:PRK14960 440 PEPQPNqdlmvfDPNHHEliglesavvqETVSVLEEDFIPVPEQKLVQVQAETQVKQiEPEPASTAEPIGLFEASSAEFS 519
|
170 180
....*....|....*....|
gi 1907070839 673 RKEPEPTTPKEPEPTTPKEP 692
Cdd:PRK14960 520 LAQDTSAYDLVSEPVIEQQS 539
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
635-699 |
3.86e-04 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 44.88 E-value: 3.86e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1907070839 635 KPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKK 699
Cdd:PRK12270 37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPA 101
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
446-532 |
4.06e-04 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 44.88 E-value: 4.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 446 STTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTtlkePEPTTPKEPepttlkePEPTTPKEPEPTTPKEPE 525
Cdd:PRK12270 48 AAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAA----AAAAAAPAA-------PPAAAAAAAPAAAAVEDE 116
|
....*..
gi 1907070839 526 PTTLKEP 532
Cdd:PRK12270 117 VTPLRGA 123
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
452-627 |
4.22e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 44.93 E-value: 4.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 452 PEPTTPKEPEPTTPKEPEPTTPKEPEP---------TTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKePEPTT-- 520
Cdd:PHA03247 269 PETARGATGPPPPPEAAAPNGAAAPPDgvwgaalagAPLALPAPPDPPPPAPAGDAEEEDDEDGAMEVVSPL-PRPRQhy 347
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 521 ----PKEPEPT--------TLKEPEPTTPKEPEPTTLKEPEP---------------TTPKEPEPTTTKEPESTTRKEPE 573
Cdd:PHA03247 348 plgfPKRRRPTwtppssleDLSAGRHHPKRASLPTRKRRSARhaatpfargpggddqTRPAAPVPASVPTPAPTPVPASA 427
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070839 574 PTTPKEPEPT-TPKEPE-PTTPKEPEPTTPKEPePTTPKEPEPTT----------PKEPEPTTPKE 627
Cdd:PHA03247 428 PPPPATPLPSaEPGSDDgPAPPPERQPPAPATE-PAPDDPDDATRkaldalrerrPPEPPGADLAE 492
|
|
| PRK13335 |
PRK13335 |
superantigen-like protein SSL3; Reviewed; |
563-666 |
4.28e-04 |
|
superantigen-like protein SSL3; Reviewed;
Pssm-ID: 139494 [Multi-domain] Cd Length: 356 Bit Score: 43.96 E-value: 4.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 563 EPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEpEPTTPKEPEPTTPKEPEPTTpkEPEPTTPKePEPTTPkkPEPTTPK 642
Cdd:PRK13335 69 RQERTPKLEKAPNTNEEKTSASKIEKISQPKQE-EQKSLNISATPAPKQEQSQT--TTESTTPK-TKVTTP--PSTNTPQ 142
|
90 100
....*....|....*....|....*
gi 1907070839 643 EPEPTTPKEPE-PTTPKEPEPTTPK 666
Cdd:PRK13335 143 PMQSTKSDTPQsPTIKQAQTDMTPK 167
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
607-679 |
4.66e-04 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 43.90 E-value: 4.66e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907070839 607 TTPKEPEPTTPKEPEPTTPK-EPEPTTPKKPEPTTPKEPEPTTPKEPEPTtpkEPEPTTPKEPEPTTRKEPEPT 679
Cdd:PTZ00144 120 TGGAPPAAAPAAAAAAKAEKtTPEKPKAAAPTPEPPAASKPTPPAAAKPP---EPAPAAKPPPTPVARADPRET 190
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
551-611 |
5.33e-04 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 43.73 E-value: 5.33e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070839 551 TTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 611
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
604-699 |
5.52e-04 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 42.68 E-value: 5.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 604 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKKPEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPK 682
Cdd:PRK11633 45 PKPGDRDEPDMMPAaTQALPTQPPEGAAEAVRAGDAAAP-SLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQ 123
|
90
....*....|....*..
gi 1907070839 683 EPEPTTPKEPEPTTPKK 699
Cdd:PRK11633 124 KVEAPPAPKPEPKPVVE 140
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
583-643 |
5.66e-04 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 43.73 E-value: 5.66e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070839 583 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKE 643
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
500-601 |
6.16e-04 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 42.68 E-value: 6.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 500 PEPTTLKEPEPTTP-KEPEPTTPKEPEPTTLKEPEPTTPkEPEPTTLkePEPTTPKEPEPTTTKEPESTTRKEPEPTTPK 578
Cdd:PRK11633 45 PKPGDRDEPDMMPAaTQALPTQPPEGAAEAVRAGDAAAP-SLDPATV--APPNTPVEPEPAPVEPPKPKPVEKPKPKPKP 121
|
90 100
....*....|....*....|...
gi 1907070839 579 EPEPTTPKEPEPTTPKEPEPTTP 601
Cdd:PRK11633 122 QQKVEAPPAPKPEPKPVVEEKAA 144
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
468-597 |
6.41e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 43.93 E-value: 6.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 468 PEPTTPKEPEPTTPkEPEPttlkEPEPTTPKEPEPTtlkePEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKE 547
Cdd:PRK14951 376 AEKKTPARPEAAAP-AAAP----VAQAAAAPAPAAA----PAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVA 446
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 1907070839 548 PEPTTPKEPEPTTTKEPestTRKEPEPTTPKEPEPTTPKEPEPTTPKEPE 597
Cdd:PRK14951 447 LAPAPPAQAAPETVAIP---VRVAPEPAVASAAPAPAAAPAAARLTPTEE 493
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
450-505 |
6.49e-04 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 41.19 E-value: 6.49e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 1907070839 450 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPK--EPEPTTL 505
Cdd:pfam02389 68 KVPEPCYPKVPEPCSPKVPEPCHPKAPEPCHPKVPEPCYPKAPEPCQPKvpEPCPSTV 125
|
|
| PRK10905 |
PRK10905 |
cell division protein DamX; Validated |
455-567 |
6.82e-04 |
|
cell division protein DamX; Validated
Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 43.39 E-value: 6.82e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 455 TTPKEPEPTTP------KEPEPTTPKEPEPTTPKEPEPTTLKEPepttpKEPEPTTLKEPEPT--TPKEPEPTTPKEPEP 526
Cdd:PRK10905 122 TLPTEPATVAPvrngnaSRQTAKTQTAERPATTRPARKQAVIEP-----KKPQATAKTEPKPVaqTPKRTEPAAPVASTK 196
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 1907070839 527 TtlkePEPTTPKEPEPTTLKEPEPT-TPKEPEPTTTKEPEST 567
Cdd:PRK10905 197 A----PAATSTPAPKETATTAPVQTaSPAQTTATPAAGGKTA 234
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
449-579 |
7.08e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 43.71 E-value: 7.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 449 RKEPEPTTPKEPEPTTP---KEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEP--TTPKEPEPTTPKE 523
Cdd:PRK12323 447 APAPAPAPAAAPAAAARpaaAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPaqPDAAPAGWVAESI 526
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070839 524 PEPTTLKEPEPTTPKEPEPTTlkEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKE 579
Cdd:PRK12323 527 PDPATADPDDAFETLAPAPAA--APAPRAAAATEPVVAPRPPRASASGLPDMFDGD 580
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
492-565 |
7.15e-04 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 43.73 E-value: 7.15e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907070839 492 PEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPE 565
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAA 111
|
|
| PRK13042 |
PRK13042 |
superantigen-like protein SSL4; Reviewed; |
583-666 |
7.31e-04 |
|
superantigen-like protein SSL4; Reviewed;
Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 43.08 E-value: 7.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 583 TTPKEPEPTTPKEPEPTTPKEPEPTTpkepEPTTPKE-PEPTTPKEPEPTTPK-KPEPTTPKEPEPTTPKepEPTTPKEP 660
Cdd:PRK13042 23 TTTQAANATTPSSTKVEAPQSTPPST----KVEAPQSkPNATTPPSTKVEAPQqTPNATTPSSTKVETPQ--SPTTKQVP 96
|
....*.
gi 1907070839 661 EPTTPK 666
Cdd:PRK13042 97 TEINPK 102
|
|
| PTZ00108 |
PTZ00108 |
DNA topoisomerase 2-like protein; Provisional |
495-699 |
7.61e-04 |
|
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 43.88 E-value: 7.61e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 495 TTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPepTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEP 574
Cdd:PTZ00108 1154 KEQRLKSKTKGKASKLRKPKLKKKEKKKKKSSADKSKK--ASVVGNSKRVDSDEKRKLDDKPDNKKSNSSGSDQEDDEEQ 1231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 575 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP--TTPKKPEPTTPKEPEPTTPKEP 652
Cdd:PTZ00108 1232 KTKPKKSSVKRLKSKKNNSSKSSEDNDEFSSDDLSKEGKPKNAPKRVSAVQYSPPPpsKRPDGESNGGSKPSSPTKKKVK 1311
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1907070839 653 EPTTPKEPEPTTPKEPEPTT-RKEPEPTTPKEPEPTTPKEPEPTTPKK 699
Cdd:PTZ00108 1312 KRLEGSLAALKKKKKSEKKTaRKKKSKTRVKQASASQSSRLLRRPRKK 1359
|
|
| PHA03264 |
PHA03264 |
envelope glycoprotein D; Provisional |
565-664 |
7.66e-04 |
|
envelope glycoprotein D; Provisional
Pssm-ID: 223029 [Multi-domain] Cd Length: 416 Bit Score: 43.46 E-value: 7.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 565 ESTTRKEPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEP 644
Cdd:PHA03264 259 EESKGYEPPPA-PSGGSPAPPGDDRPEAKPEPGPVEDGAPGRETGGEGEGPEPAGRDGAAGGEPKPGPPRPAPDADRPEG 337
|
90 100
....*....|....*....|.
gi 1907070839 645 EPTTPKEP-EPTTPKEPEPTT 664
Cdd:PHA03264 338 WPSLEAITfPPPTPATPAVPR 358
|
|
| PRK10905 |
PRK10905 |
cell division protein DamX; Validated |
551-681 |
7.71e-04 |
|
cell division protein DamX; Validated
Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 43.00 E-value: 7.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 551 TTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPepTTPKEPEPTTPKEPEPTTPKEPEP--TTPKEPEpttpkEP 628
Cdd:PRK10905 106 TQPQNQQQLNNVAVNSTLPTEPATVAPVRNGNASRQTA--KTQTAERPATTRPARKQAVIEPKKpqATAKTEP-----KP 178
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 1907070839 629 EPTTPKKPEPTTPKEPepttPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTP 681
Cdd:PRK10905 179 VAQTPKRTEPAAPVAS----TKAPAATSTPAPKETATTAPVQTASPAQTTATP 227
|
|
| PRK13335 |
PRK13335 |
superantigen-like protein SSL3; Reviewed; |
496-594 |
7.95e-04 |
|
superantigen-like protein SSL3; Reviewed;
Pssm-ID: 139494 [Multi-domain] Cd Length: 356 Bit Score: 43.19 E-value: 7.95e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 496 TPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTlkEPEPTTPKepePTTTKEPESTTRKEPEPT 575
Cdd:PRK13335 73 TPKLEKAPNTNEEKTSASKIEKISQPKQEEQKSLNISATPAPKQEQSQT--TTESTTPK---TKVTTPPSTNTPQPMQST 147
|
90 100
....*....|....*....|
gi 1907070839 576 TPKEPE-PTTPKEPEPTTPK 594
Cdd:PRK13335 148 KSDTPQsPTIKQAQTDMTPK 167
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
448-515 |
8.01e-04 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 43.35 E-value: 8.01e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907070839 448 TRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKE 515
Cdd:TIGR00601 75 SKPKTGTGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
604-676 |
8.09e-04 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 43.13 E-value: 8.09e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907070839 604 PEPTTPKEPEPTTPKePEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEP 676
Cdd:PTZ00144 122 GAPPAAAPAAAAAAK-AEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRETRVP 193
|
|
| PRK12757 |
PRK12757 |
cell division protein FtsN; Provisional |
616-685 |
8.17e-04 |
|
cell division protein FtsN; Provisional
Pssm-ID: 237191 [Multi-domain] Cd Length: 256 Bit Score: 42.72 E-value: 8.17e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 616 TPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPE 685
Cdd:PRK12757 111 TPQVPRSTVQIQQQAQQQQPPATTAQPQPVTPPRQTTAPVQPQTPAPVRTQPAAPVTQAVEAPKVEAEKE 180
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
500-579 |
8.19e-04 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 43.73 E-value: 8.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 500 PEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKE 579
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
|
| PHA03169 |
PHA03169 |
hypothetical protein; Provisional |
451-617 |
8.52e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 43.04 E-value: 8.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 451 EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPkEPEPTTLKEPEPTTPKEPEPTTPKEPEPttlk 530
Cdd:PHA03169 111 AEELASGLSPENTSGSSPESPASHSPPPSPPSHPGPHEPAPPESHNP-SPNQQPSSFLQPSHEDSPEEPEPPTSEP---- 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 531 EPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPepttpkEPEPTTPKEPEPTTPK 610
Cdd:PHA03169 186 EPDSPGPPQSETPTSSPPPQSPPDEPGEPQSPTPQQAPSPNTQQAVEHEDEPTEPERE------GPPFPGHRSHSYTVVG 259
|
....*..
gi 1907070839 611 EPEPTTP 617
Cdd:PHA03169 260 WKPSTRP 266
|
|
| dnaA |
PRK14086 |
chromosomal replication initiator protein DnaA; |
549-742 |
8.78e-04 |
|
chromosomal replication initiator protein DnaA;
Pssm-ID: 237605 [Multi-domain] Cd Length: 617 Bit Score: 43.28 E-value: 8.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 549 EPTTPKEPEPTTTKEPESTT--RKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEpepTTPKEPEPtTPKEPEPTTPK 626
Cdd:PRK14086 93 GEPAPPPPHARRTSEPELPRpgRRPYEGYGGPRADDRPPGLPRQDQLPTARPAYPAY---QQRPEPGA-WPRAADDYGWQ 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 627 EPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRkePEPTTPKEPEPTTPkEPEPTTPKKPEPTTTS 706
Cdd:PRK14086 169 QQRLGFPPRAPYASPASYAPEQERDREPYDAGRPEYDQRRRDYDHPR--PDWDRPRRDRTDRP-EPPPGAGHVHRGGPGP 245
|
170 180 190
....*....|....*....|....*....|....*.
gi 1907070839 707 PKTTTLKATTLAPKvtAPAEEIQNKPEETTPASEDS 742
Cdd:PRK14086 246 PERDDAPVVPIRPS--APGPLAAQPAPAPGPGEPTA 279
|
|
| NESP55 |
pfam06390 |
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian ... |
446-582 |
8.79e-04 |
|
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian neuroendocrine-specific golgi protein P55 (NESP55) sequences. NESP55 is a novel member of the chromogranin family and is a soluble, acidic, heat-stable secretory protein that is expressed exclusively in endocrine and nervous tissues, although less widely than chromogranins.
Pssm-ID: 115071 [Multi-domain] Cd Length: 261 Bit Score: 42.55 E-value: 8.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 446 STTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEP-TTPKEPEPTTPKEP 524
Cdd:pfam06390 118 SETEPESDIESETEFETEPETEPDTAPTTEPETEPEDEPGPVVPKGATFHQSLTERLHALKLQSAdASPRRAPPSTQEPE 197
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 1907070839 525 EPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEP 582
Cdd:pfam06390 198 SAREGEEPERGPLDKDPRDPEEEEEEKEEEKQQPHRCKPKKPARRRDPSPESPPKKGA 255
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
568-628 |
9.35e-04 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 43.45 E-value: 9.35e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907070839 568 TRKEPEPTTPKEPEPT---TPKEPEPTTPKEPEPTTPKEPePTTPKEPEPTTPKEPEPTTPKEP 628
Cdd:COG5373 38 AEAAEAASAPAEPEPEaaaAATAAAPEAAPAPVPEAPAAP-PAAAEAPAPAAAAPPAEAEPAAA 100
|
|
| PRK13335 |
PRK13335 |
superantigen-like protein SSL3; Reviewed; |
552-658 |
9.46e-04 |
|
superantigen-like protein SSL3; Reviewed;
Pssm-ID: 139494 [Multi-domain] Cd Length: 356 Bit Score: 42.81 E-value: 9.46e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 552 TPKEPEPTTTKEPESTTRKEpepTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpkEPEPTTPKePEPTTPkePEPT 631
Cdd:PRK13335 68 TRQERTPKLEKAPNTNEEKT---SASKIEKISQPKQEEQKSLNISATPAPKQEQSQT--TTESTTPK-TKVTTP--PSTN 139
|
90 100
....*....|....*....|....*...
gi 1907070839 632 TPKKPEPTTPKEPE-PTTPKEPEPTTPK 658
Cdd:PRK13335 140 TPQPMQSTKSDTPQsPTIKQAQTDMTPK 167
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
648-696 |
9.62e-04 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 40.55 E-value: 9.62e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 1907070839 648 TPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTT 696
Cdd:pfam05887 57 TDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 105
|
|
| PRK10905 |
PRK10905 |
cell division protein DamX; Validated |
463-586 |
9.94e-04 |
|
cell division protein DamX; Validated
Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 42.62 E-value: 9.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 463 TTPKEPEPTTPKEPEPTTPKEPepTTLKEPEPTTPKEPEPTTLKEPepttpKEPEPTTPKEPEPTtlkepePTTPKEPEP 542
Cdd:PRK10905 122 TLPTEPATVAPVRNGNASRQTA--KTQTAERPATTRPARKQAVIEP-----KKPQATAKTEPKPV------AQTPKRTEP 188
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1907070839 543 TTlkepEPTTPKEPEPTTTKEPESTTRKEPEPT-TPKEPEPTTPK 586
Cdd:PRK10905 189 AA----PVASTKAPAATSTPAPKETATTAPVQTaSPAQTTATPAA 229
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
488-567 |
1.06e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 42.75 E-value: 1.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 488 TLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPttlKEPEPTTPKEPEPTtlkEPEPTTPKEPEPTTTKEPEST 567
Cdd:PTZ00144 117 EIDTGGAPPAAAPAAAAAAKAEKTTPEKPKAAAPTPEPP---AASKPTPPAAAKPP---EPAPAAKPPPTPVARADPRET 190
|
|
| PRK13335 |
PRK13335 |
superantigen-like protein SSL3; Reviewed; |
507-618 |
1.07e-03 |
|
superantigen-like protein SSL3; Reviewed;
Pssm-ID: 139494 [Multi-domain] Cd Length: 356 Bit Score: 42.81 E-value: 1.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 507 EPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEpEPTTLKEPEPTTPKEPEPTTTkePESTTRKePEPTTPkepePTTPK 586
Cdd:PRK13335 69 RQERTPKLEKAPNTNEEKTSASKIEKISQPKQE-EQKSLNISATPAPKQEQSQTT--TESTTPK-TKVTTP----PSTNT 140
|
90 100 110
....*....|....*....|....*....|..
gi 1907070839 587 EPEPTTPKEPEPTTpkepePTTPKEPEPTTPK 618
Cdd:PRK13335 141 PQPMQSTKSDTPQS-----PTIKQAQTDMTPK 167
|
|
| SPESP1 |
pfam15754 |
Sperm equatorial segment protein 1; |
458-590 |
1.08e-03 |
|
Sperm equatorial segment protein 1;
Pssm-ID: 464848 [Multi-domain] Cd Length: 322 Bit Score: 42.52 E-value: 1.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 458 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPT-TPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTT----LKEP 532
Cdd:pfam15754 38 KSKSPNNVYSIKPKVSKEKELHTHGVNSTENDVLINPEeEETTPFPTFGFTLERKKRKKTESTAFWSIKPNNvsivLHTE 117
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907070839 533 EPTTPK---EPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTT-PKEPEP 590
Cdd:pfam15754 118 EPYIEKpepEPEPEPEPEPEPTSKTFSRVTDFPRRSAPTVTSPPPATTTLSTSTDeDTSTES 179
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
574-739 |
1.09e-03 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 43.10 E-value: 1.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 574 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpkEPEPTTPKEPEPTTPkkPEPTTPKEPEPTTPKEPE 653
Cdd:PRK10811 846 PVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVV--EAVAEVVEEPVVVAE--PQPEEVVVVETTHPEVIA 921
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 654 PTTPKEPEPTTPKE---PEPTTRkEPEPTTPKEPEPTTPKEPEPTT---PKKPEPTTTSPKTTTLKATTLAPKVTAPAEE 727
Cdd:PRK10811 922 APVTEQPQVITESDvavAQEVAE-HAEPVVEPQDETADIEEAAETAevvVAEPEVVAQPAAPVVAEVAAEVETVTAVEPE 1000
|
170
....*....|..
gi 1907070839 728 IQNKPEETTPAS 739
Cdd:PRK10811 1001 VAPAQVPEATVE 1012
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
543-603 |
1.10e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 42.57 E-value: 1.10e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070839 543 TTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 603
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
492-603 |
1.11e-03 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 42.91 E-value: 1.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 492 PEPTTPKEPEPTTLkepEPTTPKEPEPTTPKEPEPTTLkepePTTPkePEPTTlkEPEPTTPKEPEPTTTKePESTTRKE 571
Cdd:COG3266 267 PATTSLGEQQEVSL---PPAVAAQPAAAAAAQPSAVAL----PAAP--AAAAA--AAAPAEAAAPQPTAAK-PVVTETAA 334
|
90 100 110
....*....|....*....|....*....|..
gi 1907070839 572 PEPTTPKEPEPTTPkepePTTPKEPEPTTPKE 603
Cdd:COG3266 335 PAAPAPEAAAAAAA----PAAPAVAKKLAADE 362
|
|
| PRK13335 |
PRK13335 |
superantigen-like protein SSL3; Reviewed; |
560-682 |
1.16e-03 |
|
superantigen-like protein SSL3; Reviewed;
Pssm-ID: 139494 [Multi-domain] Cd Length: 356 Bit Score: 42.42 E-value: 1.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 560 TTKEPESTTRKEPEPTTPKEPEPTTPKEpepTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpkEPEPTTPKkPEPT 639
Cdd:PRK13335 60 SATTQAANTRQERTPKLEKAPNTNEEKT---SASKIEKISQPKQEEQKSLNISATPAPKQEQSQT--TTESTTPK-TKVT 133
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 1907070839 640 TPkePEPTTPKEPEPTTPKEPEpttpkepEPTTRKEPEPTTPK 682
Cdd:PRK13335 134 TP--PSTNTPQPMQSTKSDTPQ-------SPTIKQAQTDMTPK 167
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
524-607 |
1.24e-03 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 42.96 E-value: 1.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 524 PEPTTLKEPEPTTPKEPEPTTlkEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPtTPKE 603
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAP--AAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAA-AAVE 114
|
....
gi 1907070839 604 PEPT 607
Cdd:PRK12270 115 DEVT 118
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
607-667 |
1.28e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 42.57 E-value: 1.28e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070839 607 TTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 667
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| PHA03264 |
PHA03264 |
envelope glycoprotein D; Provisional |
511-616 |
1.30e-03 |
|
envelope glycoprotein D; Provisional
Pssm-ID: 223029 [Multi-domain] Cd Length: 416 Bit Score: 42.68 E-value: 1.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 511 TTPKEPEPTTPKEPEPTTlKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEP 590
Cdd:PHA03264 253 VVPPYFEESKGYEPPPAP-SGGSPAPPGDDRPEAKPEPGPVEDGAPGRETGGEGEGPEPAGRDGAAGGEPKPGPPRPAPD 331
|
90 100
....*....|....*....|....*..
gi 1907070839 591 TTPKEPEPTTPKEP-EPTTPKEPEPTT 616
Cdd:PHA03264 332 ADRPEGWPSLEAITfPPPTPATPAVPR 358
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
599-659 |
1.30e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 42.57 E-value: 1.30e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070839 599 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKE 659
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| dnaA |
PRK14086 |
chromosomal replication initiator protein DnaA; |
475-679 |
1.32e-03 |
|
chromosomal replication initiator protein DnaA;
Pssm-ID: 237605 [Multi-domain] Cd Length: 617 Bit Score: 42.89 E-value: 1.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 475 EPEPTTPKEPEPTtlkePEPTTPKEPEPTTLKEPEPttpkEPEPTTPKEPEPTTLKEPEPTTPKEPEPttlkePEPTT-P 553
Cdd:PRK14086 93 GEPAPPPPHARRT----SEPELPRPGRRPYEGYGGP----RADDRPPGLPRQDQLPTARPAYPAYQQR-----PEPGAwP 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 554 KEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpkEPEPTTPKEPEPTTPkEPEPTTP 633
Cdd:PRK14086 160 RAADDYGWQQQRLGFPPRAPYASPASYAPEQERDREPYDAGRPEYDQRRRDYDHP--RPDWDRPRRDRTDRP-EPPPGAG 236
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 1907070839 634 KKPEPTTPKEPEPTTPKEPE----PTTPKEPEPTTPKEPEPTTRKEPEPT 679
Cdd:PRK14086 237 HVHRGGPGPPERDDAPVVPIrpsaPGPLAAQPAPAPGPGEPTARLNPKYT 286
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
591-651 |
1.41e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 42.19 E-value: 1.41e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070839 591 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKE 651
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| SAV_2336_NTERM |
NF041121 |
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ... |
588-671 |
1.46e-03 |
|
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.
Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 42.68 E-value: 1.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 588 PEPTTPKEPEPTTPKEPEPTtpkePEPTTPkEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 667
Cdd:NF041121 19 AAPPSPEGPAPTAASQPATP----PPPAAP-PSPPGDPPEPPAPEPAPLPAPYPGSLAPPPPPPPGPAGAAPGAALPVRV 93
|
....
gi 1907070839 668 PEPT 671
Cdd:NF041121 94 PAPP 97
|
|
| PRK12757 |
PRK12757 |
cell division protein FtsN; Provisional |
600-673 |
1.46e-03 |
|
cell division protein FtsN; Provisional
Pssm-ID: 237191 [Multi-domain] Cd Length: 256 Bit Score: 41.57 E-value: 1.46e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907070839 600 TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTR 673
Cdd:PRK12757 111 TPQVPRSTVQIQQQAQQQQPPATTAQPQPVTPPRQTTAPVQPQTPAPVRTQPAAPVTQAVEAPKVEAEKEKEQR 184
|
|
| PRK12757 |
PRK12757 |
cell division protein FtsN; Provisional |
592-661 |
1.50e-03 |
|
cell division protein FtsN; Provisional
Pssm-ID: 237191 [Multi-domain] Cd Length: 256 Bit Score: 41.57 E-value: 1.50e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 592 TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPE 661
Cdd:PRK12757 111 TPQVPRSTVQIQQQAQQQQPPATTAQPQPVTPPRQTTAPVQPQTPAPVRTQPAAPVTQAVEAPKVEAEKE 180
|
|
| PTZ00108 |
PTZ00108 |
DNA topoisomerase 2-like protein; Provisional |
448-654 |
1.55e-03 |
|
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 42.73 E-value: 1.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 448 TRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPT 527
Cdd:PTZ00108 1169 LRKPKLKKKEKKKKKSSADKSKKASVVGNSKRVDSDEKRKLDDKPDNKKSNSSGSDQEDDEEQKTKPKKSSVKRLKSKKN 1248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 528 TLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPE--STTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 605
Cdd:PTZ00108 1249 NSSKSSEDNDEFSSDDLSKEGKPKNAPKRVSAVQYSPPppSKRPDGESNGGSKPSSPTKKKVKKRLEGSLAALKKKKKSE 1328
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 1907070839 606 PTT-PKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEP 654
Cdd:PTZ00108 1329 KKTaRKKKSKTRVKQASASQSSRLLRRPRKKKSDSSSEDDDDSEVDDSED 1378
|
|
| PRK13335 |
PRK13335 |
superantigen-like protein SSL3; Reviewed; |
547-650 |
1.59e-03 |
|
superantigen-like protein SSL3; Reviewed;
Pssm-ID: 139494 [Multi-domain] Cd Length: 356 Bit Score: 42.04 E-value: 1.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 547 EPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEpEPTTPKEPEPTTPKEPEP-TTPKEPEPTtpkePEPTTPkePEPTTP 625
Cdd:PRK13335 69 RQERTPKLEKAPNTNEEKTSASKIEKISQPKQE-EQKSLNISATPAPKQEQSqTTTESTTPK----TKVTTP--PSTNTP 141
|
90 100
....*....|....*....|....*.
gi 1907070839 626 KEPEPTTPKKPE-PTTPKEPEPTTPK 650
Cdd:PRK13335 142 QPMQSTKSDTPQsPTIKQAQTDMTPK 167
|
|
| PTZ00108 |
PTZ00108 |
DNA topoisomerase 2-like protein; Provisional |
507-746 |
1.62e-03 |
|
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 42.73 E-value: 1.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 507 EPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPK 586
Cdd:PTZ00108 1149 EKEIAKEQRLKSKTKGKASKLRKPKLKKKEKKKKKSSADKSKKASVVGNSKRVDSDEKRKLDDKPDNKKSNSSGSDQEDD 1228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 587 EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEpepTTPKEPEPTTPKKPEPTTPKEPEPTTPKepepTTPKEPEPTTPK 666
Cdd:PTZ00108 1229 EEQKTKPKKSSVKRLKSKKNNSSKSSEDNDEFS---SDDLSKEGKPKNAPKRVSAVQYSPPPPS----KRPDGESNGGSK 1301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 667 EPEPTTRKEPEPTTPKEPEPTTPKEPEPTTP--KKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQN-KPEET--TPASED 741
Cdd:PTZ00108 1302 PSSPTKKKVKKRLEGSLAALKKKKKSEKKTArkKKSKTRVKQASASQSSRLLRRPRKKKSDSSSEDdDDSEVddSEDEDD 1381
|
....*
gi 1907070839 742 SDDSK 746
Cdd:PTZ00108 1382 EDDED 1386
|
|
| PRK12757 |
PRK12757 |
cell division protein FtsN; Provisional |
485-569 |
1.69e-03 |
|
cell division protein FtsN; Provisional
Pssm-ID: 237191 [Multi-domain] Cd Length: 256 Bit Score: 41.57 E-value: 1.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 485 EPTTLKE-PE-PTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTK 562
Cdd:PRK12757 98 QPTQLSEvPYnEQTPQVPRSTVQIQQQAQQQQPPATTAQPQPVTPPRQTTAPVQPQTPAPVRTQPAAPVTQAVEAPKVEA 177
|
....*..
gi 1907070839 563 EPESTTR 569
Cdd:PRK12757 178 EKEKEQR 184
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
580-652 |
1.70e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 42.36 E-value: 1.70e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907070839 580 PEPTTPKEPEPTTPKePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEP 652
Cdd:PTZ00144 122 GAPPAAAPAAAAAAK-AEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRETRVP 193
|
|
| PRK01297 |
PRK01297 |
ATP-dependent RNA helicase RhlB; Provisional |
574-637 |
1.72e-03 |
|
ATP-dependent RNA helicase RhlB; Provisional
Pssm-ID: 234938 [Multi-domain] Cd Length: 475 Bit Score: 42.21 E-value: 1.72e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907070839 574 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPE 637
Cdd:PRK01297 13 EAEQPAPAPPSPAAAPAPPPPAKTAAPATKAAAPAAAAPRAEKPKKDKPRRERKPKPASLWKLE 76
|
|
| SAV_2336_NTERM |
NF041121 |
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ... |
572-646 |
1.73e-03 |
|
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.
Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 42.30 E-value: 1.73e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1907070839 572 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkePEPTTPkEPEPTTPKKPEPTTPKEPEP 646
Cdd:NF041121 19 AAPPSPEGPAPTAASQPATPPPPAAPPSPPGDPPEPPAPEPAPLPA--PYPGSL-APPPPPPPGPAGAAPGAALP 90
|
|
| PRK01297 |
PRK01297 |
ATP-dependent RNA helicase RhlB; Provisional |
598-673 |
1.74e-03 |
|
ATP-dependent RNA helicase RhlB; Provisional
Pssm-ID: 234938 [Multi-domain] Cd Length: 475 Bit Score: 42.21 E-value: 1.74e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070839 598 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTR 673
Cdd:PRK01297 13 EAEQPAPAPPSPAAAPAPPPPAKTAAPATKAAAPAAAAPRAEKPKKDKPRRERKPKPASLWKLEDFVVEPQEGKTR 88
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
578-636 |
1.84e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 42.29 E-value: 1.84e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907070839 578 KEPEPTTPKEPEPT---TPKEPEPTTPKEPEPTTPKEPePTTPKEPEPTTPKEPEPTTPKKP 636
Cdd:COG5373 40 AAEAASAPAEPEPEaaaAATAAAPEAAPAPVPEAPAAP-PAAAEAPAPAAAAPPAEAEPAAA 100
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
426-747 |
1.85e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 42.28 E-value: 1.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 426 KEPEPTTTKEPEPtttkepesttrkEPEPTTPKEPEPTTP-KEPEPTTPKEPEPTtpKEPEPTTLKEPEPTTPKEPEPTT 504
Cdd:PRK07764 421 AAPAPAAAPQPAP------------APAPAPAPPSPAGNApAGGAPSPPPAAAPS--AQPAPAPAAAPEPTAAPAPAPPA 486
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 505 LKEPEPTTPKEPEPTTP------------------------------KEPEPT---------TLKEPEP----------- 534
Cdd:PRK07764 487 APAPAAAPAAPAAPAAPagaddaatlrerwpeilaavpkrsrktwaiLLPEATvlgvrgdtlVLGFSTGglarrfaspgn 566
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 535 -----------------------TTPKEPEPTTLKEPEPTTPKE--PEPTTTKEPESTTRKEPePTTPKEPEPTTPKEPE 589
Cdd:PRK07764 567 aevlvtalaeelggdwqveavvgPAPGAAGGEGPPAPASSGPPEeaARPAAPAAPAAPAAPAP-AGAAAAPAEASAAPAP 645
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 590 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE-PEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 668
Cdd:PRK07764 646 GVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPaPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAA 725
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070839 669 EPTTRKePEPTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTPASEDSDDSKT 747
Cdd:PRK07764 726 QGASAP-SPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAPSMDDEDRRDAEE 803
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
564-647 |
1.85e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 41.98 E-value: 1.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 564 PESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPepttPKEPEPTTPKEPEPTTPKEPEPTtpkEPEPTTPKKPEPTTPKE 643
Cdd:PTZ00144 114 PLSEIDTGGAPPAAAPAAAAAAKAEKTTPEKPK----AAAPTPEPPAASKPTPPAAAKPP---EPAPAAKPPPTPVARAD 186
|
....
gi 1907070839 644 PEPT 647
Cdd:PTZ00144 187 PRET 190
|
|
| PRK01297 |
PRK01297 |
ATP-dependent RNA helicase RhlB; Provisional |
582-645 |
1.96e-03 |
|
ATP-dependent RNA helicase RhlB; Provisional
Pssm-ID: 234938 [Multi-domain] Cd Length: 475 Bit Score: 42.21 E-value: 1.96e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907070839 582 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPE 645
Cdd:PRK01297 13 EAEQPAPAPPSPAAAPAPPPPAKTAAPATKAAAPAAAAPRAEKPKKDKPRRERKPKPASLWKLE 76
|
|
| PRK10905 |
PRK10905 |
cell division protein DamX; Validated |
557-666 |
1.98e-03 |
|
cell division protein DamX; Validated
Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 41.85 E-value: 1.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 557 EPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEP--TTPKEPEpttpkEPEPTTPKEPEPTTPKEPepttPK 634
Cdd:PRK10905 126 EPATVAPVRNGNASRQTAKTQTAERPATTRPARKQAVIEPKKpqATAKTEP-----KPVAQTPKRTEPAAPVAS----TK 196
|
90 100 110
....*....|....*....|....*....|...
gi 1907070839 635 KPEPTTPKEPEPTTPKEPEPT-TPKEPEPTTPK 666
Cdd:PRK10905 197 APAATSTPAPKETATTAPVQTaSPAQTTATPAA 229
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
586-644 |
2.01e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 42.29 E-value: 2.01e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907070839 586 KEPEPTTPKEPEPT---TPKEPEPTTPKEPEPTTPKEPePTTPKEPEPTTPKKPEPTTPKEP 644
Cdd:COG5373 40 AAEAASAPAEPEPEaaaAATAAAPEAAPAPVPEAPAAP-PAAAEAPAPAAAAPPAEAEPAAA 100
|
|
| SAV_2336_NTERM |
NF041121 |
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ... |
548-631 |
2.02e-03 |
|
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.
Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 41.91 E-value: 2.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 548 PEPTTPKEPEPTTTKEPESTtrkePEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 627
Cdd:NF041121 19 AAPPSPEGPAPTAASQPATP----PPPAAP-PSPPGDPPEPPAPEPAPLPAPYPGSLAPPPPPPPGPAGAAPGAALPVRV 93
|
....
gi 1907070839 628 PEPT 631
Cdd:NF041121 94 PAPP 97
|
|
| PRK13108 |
PRK13108 |
prolipoprotein diacylglyceryl transferase; Reviewed |
448-571 |
2.08e-03 |
|
prolipoprotein diacylglyceryl transferase; Reviewed
Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 41.89 E-value: 2.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 448 TRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP--KEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPE 525
Cdd:PRK13108 336 EVAEVTDEVAAESVVQVADRDGESTPAVEETSEAdiEREQPGDLAGQAPAAHQVDAEAASAAPEEPAALASEAHDETEPE 415
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1907070839 526 PTTLKEPEPtTPKEPEPTTLKEPEPtTPKEPEPTTTKEPESTTRKE 571
Cdd:PRK13108 416 VPEKAAPIP-DPAKPDELAVAGPGD-DPAEPDGIRRQDDFSSRRRR 459
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
583-655 |
2.09e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 41.98 E-value: 2.09e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907070839 583 TTPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKkpePTTPKEPEPTTPKEPEPT 655
Cdd:PTZ00144 120 TGGAPPAAAPAAAAAAKAEKtTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPA---PAAKPPPTPVARADPRET 190
|
|
| SAV_2336_NTERM |
NF041121 |
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ... |
628-697 |
2.09e-03 |
|
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.
Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 41.91 E-value: 2.09e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 628 PEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRkePEPTTPkEPEPTTPKEPEPTTP 697
Cdd:NF041121 19 AAPPSPEGPAPTAASQPATPPPPAAPPSPPGDPPEPPAPEPAPLPA--PYPGSL-APPPPPPPGPAGAAP 85
|
|
| PHA03169 |
PHA03169 |
hypothetical protein; Provisional |
483-649 |
2.11e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 41.88 E-value: 2.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 483 EPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEpttlkEPEPTtPKEPEPTTLKEPEPTTPKEPEPTTTK 562
Cdd:PHA03169 111 AEELASGLSPENTSGSSPESPASHSPPPSPPSHPGPHEPAPPE-----SHNPS-PNQQPSSFLQPSHEDSPEEPEPPTSE 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 563 EPESTTRKEPEPTTPKEPEPTTPKEpEPTTPKEPEPTTPKEPEPTTPKEPEpttpKEPEPTTPKEPEPTTPKKPEPTTPK 642
Cdd:PHA03169 185 PEPDSPGPPQSETPTSSPPPQSPPD-EPGEPQSPTPQQAPSPNTQQAVEHE----DEPTEPEREGPPFPGHRSHSYTVVG 259
|
....*..
gi 1907070839 643 EPEPTTP 649
Cdd:PHA03169 260 WKPSTRP 266
|
|
| PRK01297 |
PRK01297 |
ATP-dependent RNA helicase RhlB; Provisional |
590-653 |
2.16e-03 |
|
ATP-dependent RNA helicase RhlB; Provisional
Pssm-ID: 234938 [Multi-domain] Cd Length: 475 Bit Score: 41.82 E-value: 2.16e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907070839 590 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPE 653
Cdd:PRK01297 13 EAEQPAPAPPSPAAAPAPPPPAKTAAPATKAAAPAAAAPRAEKPKKDKPRRERKPKPASLWKLE 76
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
591-663 |
2.16e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 41.98 E-value: 2.16e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907070839 591 TTPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPTTPKKPEPTtpkEPEPTTPKEPEPTTPKEPEPT 663
Cdd:PTZ00144 120 TGGAPPAAAPAAAAAAKAEKtTPEKPKAAAPTPEPPAASKPTPPAAAKPP---EPAPAAKPPPTPVARADPRET 190
|
|
| Pneumo_att_G |
pfam05539 |
Pneumovirinae attachment membrane glycoprotein G; |
573-733 |
2.20e-03 |
|
Pneumovirinae attachment membrane glycoprotein G;
Pssm-ID: 114270 [Multi-domain] Cd Length: 408 Bit Score: 41.96 E-value: 2.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 573 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTT---PKEPEPTTP 649
Cdd:pfam05539 167 EPKTAVTTSKTTSWPTEVSHPTYPSQVTPQSQPATQGHQTATANQRLSSTEPVGTQGTTTSSNPEPQTeppPSQRGPSGS 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 650 KEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAeeIQ 729
Cdd:pfam05539 247 PQHPPSTTSQDQSTTGDGQEHTQRRKTPPATSNRRSPHSTATPPPTTKRQETGRPTPRPTATTQSGSSPPHSSPPG--VQ 324
|
....
gi 1907070839 730 NKPE 733
Cdd:pfam05539 325 ANPT 328
|
|
| PRK14949 |
PRK14949 |
DNA polymerase III subunits gamma and tau; Provisional |
565-742 |
2.23e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237863 [Multi-domain] Cd Length: 944 Bit Score: 42.40 E-value: 2.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 565 ESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTT--PK 642
Cdd:PRK14949 633 EGDGKKSSADRKPKTPPSRAPPASLSKPASSPDASQTSASFDLDPDFELATHQSVPEAALASGSAPAPPPVPDPYDrpPW 712
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 643 EPEPTTpkEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPkkpeptttspktttlkatTLAPKVT 722
Cdd:PRK14949 713 EEAPEV--ASANDGPNNAAEGNLSESVEDASNSELQAVEQQATHQPQVQAEAQSP------------------ASTTALT 772
|
170 180
....*....|....*....|
gi 1907070839 723 APAEEIQNKPEETTPASEDS 742
Cdd:PRK14949 773 QTSSEVQDTELNLVLLSSGS 792
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
451-539 |
2.30e-03 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 41.76 E-value: 2.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 451 EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTT--PKEPEPTTLKEPEPTTpkepeptTPKEPEPTT 528
Cdd:COG3266 279 SLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPTAakPVVTETAAPAAPAPEA-------AAAAAAPAA 351
|
90
....*....|.
gi 1907070839 529 LKEPEPTTPKE 539
Cdd:COG3266 352 PAVAKKLAADE 362
|
|
| PHA03308 |
PHA03308 |
transcriptional regulator ICP4; Provisional |
557-665 |
2.31e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 165563 [Multi-domain] Cd Length: 1463 Bit Score: 42.10 E-value: 2.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 557 EPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE-----PEPTTPKE-------PEPTT 624
Cdd:PHA03308 750 EPSAAQESPANPWPRAPPCDEQEPLSVSPYGPEPDRPPDDDFETRKGLKRKSSEDhadpiPEGNATKKtcglqglPDSLP 829
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 1907070839 625 PKEPEPTTPKKPEPTTPKEPE-PTTPKEPEPTTPKEP-EPTTP 665
Cdd:PHA03308 830 PAVPETDRDNPLLPPCPITPEgPPCPPREEPQQPQEPqEPQSP 872
|
|
| PRK10905 |
PRK10905 |
cell division protein DamX; Validated |
510-602 |
2.38e-03 |
|
cell division protein DamX; Validated
Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 41.46 E-value: 2.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 510 PTTPKEPEPTTPKEPEPTTLKEPepttpKEPEPTTLKEPEPT--TPKEPEPTTTKEPESTtrkePEPTTPKEPEPTTPKE 587
Cdd:PRK10905 143 AKTQTAERPATTRPARKQAVIEP-----KKPQATAKTEPKPVaqTPKRTEPAAPVASTKA----PAATSTPAPKETATTA 213
|
90
....*....|....*.
gi 1907070839 588 PEPT-TPKEPEPTTPK 602
Cdd:PRK10905 214 PVQTaSPAQTTATPAA 229
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
453-552 |
2.39e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 42.23 E-value: 2.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 453 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTtlkePEPTTPKEPEPTTLKEP--EPTTPKEPEPTTPKEPEPTTLK 530
Cdd:PHA03247 403 DQTRPAAPVPASVPTPAPTPVPASAPPPPATPLPS----AEPGSDDGPAPPPERQPpaPATEPAPDDPDDATRKALDALR 478
|
90 100
....*....|....*....|..
gi 1907070839 531 EPEPTTPKEPEPTTLKEPEPTT 552
Cdd:PHA03247 479 ERRPPEPPGADLAELLGRHPDT 500
|
|
| wall_bind_EntB |
NF040676 |
cell wall-binding protein EntB; This HMM describes the cell wall-binding protein EntB, as ... |
545-742 |
2.46e-03 |
|
cell wall-binding protein EntB; This HMM describes the cell wall-binding protein EntB, as found in Bacillus cereus. EntB is related to EntA, EntC, and EndD. All Ent family proteins have a signal peptide, an N-terminal SH3 domain and a C-terminal 3D (Asp-Asp-Asp) domain. EntB and EndC have a central region with a highly variable number of repeats resembling KAXEXX. The gene symbol derives from the notion that at least some members of the family function as enterotoxins, but more recent descriptions focus on roles in stress response and cell wall integrity.
Pssm-ID: 468642 [Multi-domain] Cd Length: 476 Bit Score: 41.69 E-value: 2.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 545 LKEPEPTTPKEPEPT--TTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE--- 619
Cdd:NF040676 141 LSSTAPTEKKADEKTkqVAKVQKSVKAKEEAKTQKVAKAKETTKAQEIVKPKEEVKVQEVVKPKEEPKVQEIVKPKEevk 220
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 620 -PEPTTPKEPEpttpKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPK 698
Cdd:NF040676 221 vQEEVKPKEEE----KVQEIVKPKEEAKVQEEVKVKEEAKVQEIAKAKEEAKAQEIAKAKEEAKAQEIAKAKEEAKAQEI 296
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 1907070839 699 KPEPTTTSPKTTTLKATTLAPKVTAPAEEiQNKPEETTPASEDS 742
Cdd:NF040676 297 AKAKEEEKAQEIAKAKEEAKAREIAKAKE-EEKAREIAKAKEEA 339
|
|
| SAV_2336_NTERM |
NF041121 |
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ... |
580-654 |
2.64e-03 |
|
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.
Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 41.53 E-value: 2.64e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1907070839 580 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkePEPTTPKkPEPTTPKEPEPTTPKEPEP 654
Cdd:NF041121 19 AAPPSPEGPAPTAASQPATPPPPAAPPSPPGDPPEPPAPEPAPLPA--PYPGSLA-PPPPPPPGPAGAAPGAALP 90
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
495-555 |
2.77e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 41.42 E-value: 2.77e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070839 495 TTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKE 555
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| DUF6550 |
pfam20187 |
Family of unknown function (DUF6550); This family of proteins is functionally uncharacterized. ... |
472-559 |
2.87e-03 |
|
Family of unknown function (DUF6550); This family of proteins is functionally uncharacterized. This family of proteins is found in Firmicutes. Proteins in this family are approximately 180 amino acids in length. There are two conserved sequence motifs at the C-terminal: FGW/I and I/VGxM.
Pssm-ID: 466338 [Multi-domain] Cd Length: 190 Bit Score: 40.30 E-value: 2.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 472 TPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEpEPTTPKEPE--PTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPE 549
Cdd:pfam20187 59 TDDKPGVSVQNITPDTSSNDPLDIAKSSGVEQTIQE-TPVKPAEPEkpDTAVDDHKPHVVPEEGRLTNPDTPPTYDKEPT 137
|
90
....*....|
gi 1907070839 550 PTTPKEPEPT 559
Cdd:pfam20187 138 EVKPKETEPK 147
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
588-660 |
2.95e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 41.59 E-value: 2.95e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907070839 588 PEPTTPKEPEPTTPKePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEP 660
Cdd:PTZ00144 122 GAPPAAAPAAAAAAK-AEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRETRVP 193
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
546-612 |
2.97e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 41.91 E-value: 2.97e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070839 546 KEPEPTTPKEPEPTTTKEPEsttrkEPEPTTPKEPEPTTPKEPePTTPKEPEPTTPKEPEPTTPKEP 612
Cdd:COG5373 40 AAEAASAPAEPEPEAAAAAT-----AAAPEAAPAPVPEAPAAP-PAAAEAPAPAAAAPPAEAEPAAA 100
|
|
| Pneumo_att_G |
pfam05539 |
Pneumovirinae attachment membrane glycoprotein G; |
557-699 |
3.00e-03 |
|
Pneumovirinae attachment membrane glycoprotein G;
Pssm-ID: 114270 [Multi-domain] Cd Length: 408 Bit Score: 41.57 E-value: 3.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 557 EPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT---PKEPEPTTP 633
Cdd:pfam05539 167 EPKTAVTTSKTTSWPTEVSHPTYPSQVTPQSQPATQGHQTATANQRLSSTEPVGTQGTTTSSNPEPQTeppPSQRGPSGS 246
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070839 634 KKPEPTTPKEPEPTTPKEPEpTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKePEPTTPKK 699
Cdd:pfam05539 247 PQHPPSTTSQDQSTTGDGQE-HTQRRKTPPATSNRRSPHSTATPPPTTKRQETGRPT-PRPTATTQ 310
|
|
| PHA03264 |
PHA03264 |
envelope glycoprotein D; Provisional |
535-640 |
3.02e-03 |
|
envelope glycoprotein D; Provisional
Pssm-ID: 223029 [Multi-domain] Cd Length: 416 Bit Score: 41.53 E-value: 3.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 535 TTPKEPEPTTLKEPEPTtPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 614
Cdd:PHA03264 253 VVPPYFEESKGYEPPPA-PSGGSPAPPGDDRPEAKPEPGPVEDGAPGRETGGEGEGPEPAGRDGAAGGEPKPGPPRPAPD 331
|
90 100
....*....|....*....|....*..
gi 1907070839 615 TTPKEPEPTTPKEP-EPTTPKKPEPTT 640
Cdd:PHA03264 332 ADRPEGWPSLEAITfPPPTPATPAVPR 358
|
|
| PspC_subgroup_1 |
NF033838 |
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
480-698 |
3.31e-03 |
|
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 41.54 E-value: 3.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 480 TPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKE-------PEPTTPKEPEpTTLKEPEPTTPKEPEPTTLKEPEPTT 552
Cdd:NF033838 228 TDREKAEEEAKRRADAKLKEAVEKNVATSEQDKPKRrakrgvlGEPATPDKKE-NDAKSSDSSVGEETLPSPSLKPEKKV 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 553 PK------EPEPTTTKEPESTTRKEPEPTTP-------------KEPEPTTPKEpEPTTPKEPEPTtPKEPEPTTPKEPE 613
Cdd:NF033838 307 AEaekkveEAKKKAKDQKEEDRRNYPTNTYKtleleiaesdvkvKEAELELVKE-EAKEPRNEEKI-KQAKAKVESKKAE 384
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 614 PTTPKEPEPTTPKEPEPTTPKKPEPTTPKE-----PEPTTPKEPEPTTPKEPEPT-TPKEPEPTTRKEPEPTTPKEPE-- 685
Cdd:NF033838 385 ATRLEKIKTDRKKAEEEAKRKAAEEDKVKEkpaeqPQPAPAPQPEKPAPKPEKPAeQPKAEKPADQQAEEDYARRSEEey 464
|
250 260
....*....|....*....|.
gi 1907070839 686 --------PTTPKEPEPTTPK 698
Cdd:NF033838 465 nrltqqqpPKTEKPAQPSTPK 485
|
|
| SAV_2336_NTERM |
NF041121 |
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ... |
596-679 |
3.36e-03 |
|
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.
Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 41.53 E-value: 3.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 596 PEPTTPKEPEPTTPKEPEPTtpkePEPTTPkEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKE 675
Cdd:NF041121 19 AAPPSPEGPAPTAASQPATP----PPPAAP-PSPPGDPPEPPAPEPAPLPAPYPGSLAPPPPPPPGPAGAAPGAALPVRV 93
|
....
gi 1907070839 676 PEPT 679
Cdd:NF041121 94 PAPP 97
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
551-619 |
3.42e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 41.21 E-value: 3.42e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 551 TTPKEP-EPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 619
Cdd:PTZ00144 120 TGGAPPaAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRE 189
|
|
| PRK13108 |
PRK13108 |
prolipoprotein diacylglyceryl transferase; Reviewed |
558-725 |
3.45e-03 |
|
prolipoprotein diacylglyceryl transferase; Reviewed
Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 41.12 E-value: 3.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 558 PTTTKEPESTTRKEPEPTTPKEPEPTT-PKEPEPTTPKEPEPTTPKEP-EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKK 635
Cdd:PRK13108 276 PKGREAPGALRGSEYVVDEALEREPAElAAAAVASAASAVGPVGPGEPnQPDDVAEAVKAEVAEVTDEVAAESVVQVADR 355
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 636 PEPTTPKePEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPE-PTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKA 714
Cdd:PRK13108 356 DGESTPA-VEETSEADIEREQPGDLAGQAPAAHQVDAEAASAaPEEPAALASEAHDETEPEVPEKAAPIPDPAKPDELAV 434
|
170
....*....|.
gi 1907070839 715 TTLAPKVTAPA 725
Cdd:PRK13108 435 AGPGDDPAEPD 445
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
602-660 |
3.58e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 41.52 E-value: 3.58e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907070839 602 KEPEPTTPKEPEPT---TPKEPEPTTPKEPEPTTPkKPEPTTPKEPEPTTPKEPEPTTPKEP 660
Cdd:COG5373 40 AAEAASAPAEPEPEaaaAATAAAPEAAPAPVPEAP-AAPPAAAEAPAPAAAAPPAEAEPAAA 100
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
479-539 |
3.59e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 41.03 E-value: 3.59e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070839 479 TTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKE 539
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
618-684 |
3.73e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 41.52 E-value: 3.73e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070839 618 KEPEPTTPKEPEPTTPKKPEpttpkEPEPTTPKEPEPTTPKEPePTTPKEPEPTTRKEPEPTTPKEP 684
Cdd:COG5373 40 AAEAASAPAEPEPEAAAAAT-----AAAPEAAPAPVPEAPAAP-PAAAEAPAPAAAAPPAEAEPAAA 100
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
473-606 |
3.79e-03 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 41.61 E-value: 3.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 473 PKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPttpkepEPTTPKEPEPTTLKEPEPTTPkepePTTLKEPEPTT 552
Cdd:PRK10263 716 PAGANPFSLDDFEFSPMKALLDDGPHEPLFTPIVEPVQ------QPQQPVAPQQQYQQPQQPVAP----QPQYQQPQQPV 785
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070839 553 PKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEP--EPTTPKEPEP 606
Cdd:PRK10263 786 APQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQyqQPQQPVAPQP 841
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
476-587 |
3.82e-03 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 40.99 E-value: 3.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 476 PEPTTPKEPEPTTLkepEPTTPKEPEPTTLKEPEPTTpkepEPTTPKEPEPTtlkePEPTTPKEPEPTTLK--EPEPTTP 553
Cdd:COG3266 267 PATTSLGEQQEVSL---PPAVAAQPAAAAAAQPSAVA----LPAAPAAAAAA----AAPAEAAAPQPTAAKpvVTETAAP 335
|
90 100 110
....*....|....*....|....*....|....
gi 1907070839 554 KEPEPTTTKepesttrKEPEPTTPKEPEPTTPKE 587
Cdd:COG3266 336 AAPAPEAAA-------AAAAPAAPAVAKKLAADE 362
|
|
| ftsN |
TIGR02223 |
cell division protein FtsN; FtsN is a poorly conserved protein active in cell division in a ... |
568-734 |
3.91e-03 |
|
cell division protein FtsN; FtsN is a poorly conserved protein active in cell division in a number of Proteobacteria. The N-terminal 30 residue region tends to by Lys/Arg-rich, and is followed by a membrane-spanning region. This is followed by an acidic low-complexity region of variable length and a well-conserved C-terminal domain of two tandem regions matched by pfam05036 (Sporulation related repeat), found in several cell division and sporulation proteins. The role of FtsN as a suppressor for other cell division mutations is poorly understood; it may involve cell wall hydrolysis. [Cellular processes, Cell division]
Pssm-ID: 274041 [Multi-domain] Cd Length: 298 Bit Score: 40.83 E-value: 3.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 568 TRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTP-KEPEPTTPKKPEPTTPKEPE 645
Cdd:TIGR02223 49 TESKQANEPETLQPKNQTENGETAADLPPKPEERwSYIEELEAREVLINDPEEPSNGGGvEESAQLTAEQRQLLEQMQAD 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 646 PTTPKEPEPTTPKEPEpTTPKEPEPTTRKEPEPTTPKEPEPTTPK-EPEPTTPKKPEPT-TTSPKTTTLKATTLAPKVTA 723
Cdd:TIGR02223 129 MRAAEKVLATAPSEQT-VAVEARKQTAEKKPQKARTAEAQKTPVEtEKIASKVKEAKQKqKALPKQTAETQSNSKPIETA 207
|
170
....*....|....*
gi 1907070839 724 P----AEEIQNKPEE 734
Cdd:TIGR02223 208 PkadkADKTKPKPKE 222
|
|
| PRK13335 |
PRK13335 |
superantigen-like protein SSL3; Reviewed; |
523-626 |
3.93e-03 |
|
superantigen-like protein SSL3; Reviewed;
Pssm-ID: 139494 [Multi-domain] Cd Length: 356 Bit Score: 40.88 E-value: 3.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 523 EPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTtpkePEPTTPkePEPTTPK 602
Cdd:PRK13335 69 RQERTPKLEKAPNTNEEKTSASKIEKISQPKQEEQKSLNISATPAPKQEQSQTTTESTTPK----TKVTTP--PSTNTPQ 142
|
90 100
....*....|....*....|....*
gi 1907070839 603 EPEPTTPKEPE-PTTPKEPEPTTPK 626
Cdd:PRK13335 143 PMQSTKSDTPQsPTIKQAQTDMTPK 167
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
623-683 |
4.23e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 41.03 E-value: 4.23e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070839 623 TTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKE 683
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
598-743 |
4.23e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 41.40 E-value: 4.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 598 PTTPKEPEPTTPKEPEPTTPKEPEPTTPkepEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPE 677
Cdd:PRK12323 375 ATAAAAPVAQPAPAAAAPAAAAPAPAAP---PAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPA 451
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070839 678 PTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIqnKPEETTPASEDSD 743
Cdd:PRK12323 452 PAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEEL--PPEFASPAPAQPD 515
|
|
| PHA03377 |
PHA03377 |
EBNA-3C; Provisional |
446-697 |
4.27e-03 |
|
EBNA-3C; Provisional
Pssm-ID: 177614 [Multi-domain] Cd Length: 1000 Bit Score: 41.19 E-value: 4.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 446 STTRKEPEPTTPKEPEPTTpKEPEPTTPKEPeptTPKEPEPTTLKEPepttPKEPEPTTLKEPEP--------------- 510
Cdd:PHA03377 439 RSDEAEQAQSTPERPGPSD-QPSVPVEPAHL---TPVEHTTVILHQP----PQSPPTVAIKPAPPpsrrrrgacvvyddd 510
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 511 --------TTPKEPEPTTPKEP------------EPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRK 570
Cdd:PHA03377 511 iievidveTTEEEESVTQPAKPhrkvqdgfqrsgRRQKRATPPKVSPSDRGPPKASPPVMAPPSTGPRVMATPSTGPRDM 590
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 571 EPEPTTPKEPEPTTPKEPEPTT-PKEPEPTTPKEPEPTTPKE-------PEPTTPKEPEPTTPKEPEPTTPKKPEPTTPK 642
Cdd:PHA03377 591 APPSTGPRQQAKCKDGPPASGPhEKQPPSSAPRDMAPSVVRMflrerllEQSTGPKPKSFWEMRAGRDGSGIQQEPSSRR 670
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070839 643 EP--EPTTPK----------------EPEPTTPKEPEPTTPKEP----EPTTRKEPEPTTPKEPEPTTPKEPEPTTP 697
Cdd:PHA03377 671 QPatQSTPPRpswlpsvfvlpsvdagRAQPSEESHLSSMSPTQPisheEQPRYEDPDDPLDLSLHPDQAPPPSHQAP 747
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
519-579 |
4.34e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 40.65 E-value: 4.34e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070839 519 TTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKE 579
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| SAV_2336_NTERM |
NF041121 |
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ... |
620-694 |
4.38e-03 |
|
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.
Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 41.14 E-value: 4.38e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1907070839 620 PEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEpttRKEPEPTTPKEPEPTTPKEPEP 694
Cdd:NF041121 19 AAPPSPEGPAPTAASQPATPPPPAAPPSPPGDPPEPPAPEPAPLPAPYPG---SLAPPPPPPPGPAGAAPGAALP 90
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
610-673 |
4.38e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 41.14 E-value: 4.38e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070839 610 KEPEPTTPKEPEPT---TPKEPEPTTPKKPEPTTPKEPePTTPKEPEPTTPKEPEPTTPKEPEPTTR 673
Cdd:COG5373 40 AAEAASAPAEPEPEaaaAATAAAPEAAPAPVPEAPAAP-PAAAEAPAPAAAAPPAEAEPAAAPAAAS 105
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
620-733 |
4.56e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 41.24 E-value: 4.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 620 PEPTTPKEPEPTTP-KKPEPTTPKEPEPTTP---KEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPT 695
Cdd:PRK14951 376 AEKKTPARPEAAAPaAAPVAQAAAAPAPAAApaaAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQA 455
|
90 100 110
....*....|....*....|....*....|....*...
gi 1907070839 696 TPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPE 733
Cdd:PRK14951 456 APETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEE 493
|
|
| PRK14949 |
PRK14949 |
DNA polymerase III subunits gamma and tau; Provisional |
497-652 |
4.63e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237863 [Multi-domain] Cd Length: 944 Bit Score: 41.25 E-value: 4.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 497 PKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTT 576
Cdd:PRK14949 637 KKSSADRKPKTPPSRAPPASLSKPASSPDASQTSASFDLDPDFELATHQSVPEAALASGSAPAPPPVPDPYDRPPWEEAP 716
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070839 577 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpkEPEPTtpkePEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEP 652
Cdd:PRK14949 717 EVASANDGPNNAAEGNLSESVEDASNSELQAV--EQQAT----HQPQVQAEAQSPASTTALTQTSSEVQDTELNLV 786
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
631-691 |
4.86e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 40.65 E-value: 4.86e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070839 631 TTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKE 691
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| SAV_2336_NTERM |
NF041121 |
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ... |
612-689 |
4.98e-03 |
|
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.
Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 40.76 E-value: 4.98e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907070839 612 PEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPePTTPKEPEPttrkePEPTTPKEPEPTTP 689
Cdd:NF041121 19 AAPPSPEGPAPTAASQPATPPPPAAPPSPPGDPPEPPAPEPAPLPAPYP-GSLAPPPPP-----PPGPAGAAPGAALP 90
|
|
| ZipA |
COG3115 |
Cell division protein ZipA, interacts with FtsZ [Cell cycle control, cell division, chromosome ... |
506-615 |
5.02e-03 |
|
Cell division protein ZipA, interacts with FtsZ [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442349 [Multi-domain] Cd Length: 298 Bit Score: 40.45 E-value: 5.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 506 KEPEPTTPKEPEPTTPKEPEPTTlKEPEPTTPkEPEpttLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTP 585
Cdd:COG3115 54 RVVAAEAPERVEPEASFDAEDEV-REPDQEEV-DPL---LDDEADIEAAPAEPVRWAGTAAAVEPAPEQEAYEEAGPAGE 128
|
90 100 110
....*....|....*....|....*....|
gi 1907070839 586 kEPEPTTPKEPEPTTPKEPEPTTPKEPEPT 615
Cdd:COG3115 129 -SAEQEDAPAEEPEAEAPAEEALAAELCAE 157
|
|
| PRK13042 |
PRK13042 |
superantigen-like protein SSL4; Reviewed; |
446-538 |
5.14e-03 |
|
superantigen-like protein SSL4; Reviewed;
Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 40.39 E-value: 5.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 446 STTRKEPEPTTPKEPEPTTPKEPEPTT-PKEPEPTtpkePEPTTlkePEPTTPKEPEPTtlkePEPTTPKEPEPTTPKep 524
Cdd:PRK13042 22 TTTTQAANATTPSSTKVEAPQSTPPSTkVEAPQSK----PNATT---PPSTKVEAPQQT----PNATTPSSTKVETPQ-- 88
|
90
....*....|....
gi 1907070839 525 EPTTLKEPEPTTPK 538
Cdd:PRK13042 89 SPTTKQVPTEINPK 102
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
463-523 |
5.16e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 40.65 E-value: 5.16e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070839 463 TTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKE 523
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
471-528 |
5.16e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 40.65 E-value: 5.16e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 1907070839 471 TTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTT 528
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSV 139
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
372-671 |
5.22e-03 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 41.22 E-value: 5.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 372 EPEPTTPKEPEPTtpkepepttpkepepttpkepppttkkpepttpkepepttpkepeptttkepeptttkepesTTRKE 451
Cdd:PRK10263 344 PPVASVDVPPAQP--------------------------------------------------------------TVAWQ 361
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 452 PEPtTPKEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTtlke 531
Cdd:PRK10263 362 PVP-GPQTGEPVIAPAPEGYPQ-QSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYA---- 435
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 532 PEPTTPKEPEPTTLKEPEPttPKEPEPttTKEPESTTrkePEPTTPKEPEPTTPKEPEPTTPkEPEPttpkEPEPTTPKE 611
Cdd:PRK10263 436 PAPEQPVAGNAWQAEEQQS--TFAPQS--TYQTEQTY---QQPAAQEPLYQQPQPVEQQPVV-EPEP----VVEETKPAR 503
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070839 612 PEPTTPKEPEPTTPKEPEPTTP-KKPEPTTPKEPEPTTPKEPEPTTPKEPepttPKEPEPT 671
Cdd:PRK10263 504 PPLYYFEEVEEKRAREREQLAAwYQPIPEPVKEPEPIKSSLKAPSVAAVP----PVEAAAA 560
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
604-727 |
5.31e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 40.85 E-value: 5.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 604 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPkkPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPK 682
Cdd:PRK14951 376 AEKKTPARPEAAAPaAAPVAQAAAAPAPAAA--PAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPA 453
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1907070839 683 EPEPTTPKEPEPTTPkkpepTTTSPKTTTLKATTLAPKVTAPAEE 727
Cdd:PRK14951 454 QAAPETVAIPVRVAP-----EPAVASAAPAPAAAPAAARLTPTEE 493
|
|
| PHA03308 |
PHA03308 |
transcriptional regulator ICP4; Provisional |
525-633 |
5.51e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 165563 [Multi-domain] Cd Length: 1463 Bit Score: 40.95 E-value: 5.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 525 EPTTLKE-PEPTTPKEPePTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKE-----PEPTTPKE-------PEPT 591
Cdd:PHA03308 750 EPSAAQEsPANPWPRAP-PCDEQEPLSVSPYGPEPDRPPDDDFETRKGLKRKSSEDhadpiPEGNATKKtcglqglPDSL 828
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 1907070839 592 TPKEPEPTTPKEPEPTTPKEPE-PTTPKEPEPTTPKEP-EPTTP 633
Cdd:PHA03308 829 PPAVPETDRDNPLLPPCPITPEgPPCPPREEPQQPQEPqEPQSP 872
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
511-574 |
5.53e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 40.65 E-value: 5.53e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907070839 511 TTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEpTTPKEPEPTTTKEPESTTRKEPEP 574
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEK-SPSEESATATAPESPSTSVPSSGS 144
|
|
| PRK13335 |
PRK13335 |
superantigen-like protein SSL3; Reviewed; |
467-578 |
5.76e-03 |
|
superantigen-like protein SSL3; Reviewed;
Pssm-ID: 139494 [Multi-domain] Cd Length: 356 Bit Score: 40.49 E-value: 5.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 467 EPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEpEPTTLKEPEPTTPKEPEPTTpkepepttlkEPEPTTPKepePTTLK 546
Cdd:PRK13335 69 RQERTPKLEKAPNTNEEKTSASKIEKISQPKQE-EQKSLNISATPAPKQEQSQT----------TTESTTPK---TKVTT 134
|
90 100 110
....*....|....*....|....*....|...
gi 1907070839 547 EPEPTTPKEPEPTTTKEPESTTRKEPEP-TTPK 578
Cdd:PRK13335 135 PPSTNTPQPMQSTKSDTPQSPTIKQAQTdMTPK 167
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
652-750 |
5.78e-03 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 41.03 E-value: 5.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 652 PEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKKpeptttspkttTLKATTLAPKVTAPAEeiqnK 731
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPK-----------PAAAAAAAAAPAAPPA----A 102
|
90
....*....|....*....
gi 1907070839 732 PEETTPASEDSDDSKTTLK 750
Cdd:PRK12270 103 AAAAAPAAAAVEDEVTPLR 121
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
544-609 |
5.93e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 40.44 E-value: 5.93e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070839 544 TLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKePEPTTPKEPEPTTPKEPEPTTP 609
Cdd:PTZ00144 117 EIDTGGAPPAAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAASK-PTPPAAAKPPEPAPAAKPPPTP 181
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
642-699 |
5.95e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 40.75 E-value: 5.95e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070839 642 KEPEPTTPKEPEPT---TPKEPEPTTPKEPEPtTRKEPEPTTPKEPEPTTPKEPEPTTPKK 699
Cdd:COG5373 40 AAEAASAPAEPEPEaaaAATAAAPEAAPAPVP-EAPAAPPAAAEAPAPAAAAPPAEAEPAA 99
|
|
| SAV_2336_NTERM |
NF041121 |
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ... |
460-548 |
5.97e-03 |
|
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.
Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 40.37 E-value: 5.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 460 PEPTTPKEPEPTTPKEPEPTTPkePEPTTLKEPEPTTPKEPEPTTLKEPEPTTPkEPEPTTPKEPEPTtlkEPEPTTP-K 538
Cdd:NF041121 19 AAPPSPEGPAPTAASQPATPPP--PAAPPSPPGDPPEPPAPEPAPLPAPYPGSL-APPPPPPPGPAGA---APGAALPvR 92
|
90
....*....|
gi 1907070839 539 EPEPTTLKEP 548
Cdd:NF041121 93 VPAPPALPNP 102
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
476-551 |
6.04e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 40.44 E-value: 6.04e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070839 476 PEPTTPKEPEPTTLKEPEPTTPKEPEPttlkEPEPTTPKEPEPTTPKEPEPTtlkEPEPTTPKEPEPTTLKEPEPT 551
Cdd:PTZ00144 122 GAPPAAAPAAAAAAKAEKTTPEKPKAA----APTPEPPAASKPTPPAAAKPP---EPAPAAKPPPTPVARADPRET 190
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
615-672 |
6.08e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 40.26 E-value: 6.08e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 1907070839 615 TTPKEPEPTTPKEPEPTTPkkPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 672
Cdd:TIGR00601 84 VAPPAATPTSAPTPTPSPP--ASPASGMSAAPASAVEEKSPSEESATATAPESPSTSV 139
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
615-695 |
6.41e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 40.44 E-value: 6.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 615 TTPKEPEPTTPKEPEPttpkKPEPTTPKEPEPTTPKEPEpttPKEPEPTTPKEPEPTtrkEPEPTTPKEPEPTTPKEPEP 694
Cdd:PTZ00144 120 TGGAPPAAAPAAAAAA----KAEKTTPEKPKAAAPTPEP---PAASKPTPPAAAKPP---EPAPAAKPPPTPVARADPRE 189
|
.
gi 1907070839 695 T 695
Cdd:PTZ00144 190 T 190
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
630-733 |
6.42e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 40.56 E-value: 6.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 630 PTTPKKPEPTTPKEPEPTTPKePEPTTPKEPEPTTPKEPEPTTRkEPEPTTPKEPEPTTPkePEPTTPKKPEPTTTSPKT 709
Cdd:PRK14950 362 PVPAPQPAKPTAAAPSPVRPT-PAPSTRPKAAAAANIPPKEPVR-ETATPPPVPPRPVAP--PVPHTPESAPKLTRAAIP 437
|
90 100
....*....|....*....|....
gi 1907070839 710 TTLKATTLAPKVTAPAEEIQNKPE 733
Cdd:PRK14950 438 VDEKPKYTPPAPPKEEEKALIADG 461
|
|
| PRK10819 |
PRK10819 |
transport protein TonB; Provisional |
452-553 |
6.56e-03 |
|
transport protein TonB; Provisional
Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 39.67 E-value: 6.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 452 PEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPepttlKEPEPTTPKEPEPTTPKEPEPTTLK 530
Cdd:PRK10819 74 PEPEPEPIPEPPKEAPvVIPKPEPKPKPKPKPKPKPVKKVEEQPKREVKP-----VEPRPASPFENTAPARPTSSTATAA 148
|
90 100
....*....|....*....|...
gi 1907070839 531 EPEPTTPKEPEPTTLKEPEPTTP 553
Cdd:PRK10819 149 ASKPVTSVSSGPRALSRNQPQYP 171
|
|
| DUF6550 |
pfam20187 |
Family of unknown function (DUF6550); This family of proteins is functionally uncharacterized. ... |
608-695 |
6.66e-03 |
|
Family of unknown function (DUF6550); This family of proteins is functionally uncharacterized. This family of proteins is found in Firmicutes. Proteins in this family are approximately 180 amino acids in length. There are two conserved sequence motifs at the C-terminal: FGW/I and I/VGxM.
Pssm-ID: 466338 [Multi-domain] Cd Length: 190 Bit Score: 39.14 E-value: 6.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 608 TPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEpEPTTPKEPE--PTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPE 685
Cdd:pfam20187 59 TDDKPGVSVQNITPDTSSNDPLDIAKSSGVEQTIQE-TPVKPAEPEkpDTAVDDHKPHVVPEEGRLTNPDTPPTYDKEPT 137
|
90
....*....|
gi 1907070839 686 PTTPKEPEPT 695
Cdd:pfam20187 138 EVKPKETEPK 147
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
608-698 |
6.67e-03 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 40.84 E-value: 6.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 608 TPKEP--EPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEpTTPKEPEPTTPKEPEPTTPKEPEPTTRkepEPTTPKEPE 685
Cdd:PRK10263 739 GPHEPlfTPIVEPVQQPQQPVAPQQQYQQPQQPVAPQPQY-QQPQQPVAPQPQYQQPQQPVAPQPQYQ---QPQQPVAPQ 814
|
90
....*....|...
gi 1907070839 686 PTTPKEPEPTTPK 698
Cdd:PRK10263 815 PQYQQPQQPVAPQ 827
|
|
| PRK01297 |
PRK01297 |
ATP-dependent RNA helicase RhlB; Provisional |
617-685 |
6.69e-03 |
|
ATP-dependent RNA helicase RhlB; Provisional
Pssm-ID: 234938 [Multi-domain] Cd Length: 475 Bit Score: 40.28 E-value: 6.69e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070839 617 PKEPEPTTPKEPEPTTPKKPEPTTPkepepTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPE 685
Cdd:PRK01297 13 EAEQPAPAPPSPAAAPAPPPPAKTA-----APATKAAAPAAAAPRAEKPKKDKPRRERKPKPASLWKLE 76
|
|
| PHA03169 |
PHA03169 |
hypothetical protein; Provisional |
490-699 |
6.75e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 40.34 E-value: 6.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 490 KEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTK--EPEST 567
Cdd:PHA03169 44 AKPAPPAPTTSGPQVRAVAEQGHRQTESDTETAEESRHGEKEERGQGGPSGSGSESVGSPTPSPSGSAEELASglSPENT 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 568 TRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPttpkkpEPTTPKEPEPT 647
Cdd:PHA03169 124 SGSSPESPASHSPPPSPPSHPGPHEPAPPESHNP-SPNQQPSSFLQPSHEDSPEEPEPPTSEP------EPDSPGPPQSE 196
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1907070839 648 TPKEPEPTTPKEPEPTTPKEPEPttRKEPEPTTPKEPEpttpKEPEPTTPKK 699
Cdd:PHA03169 197 TPTSSPPPQSPPDEPGEPQSPTP--QQAPSPNTQQAVE----HEDEPTEPER 242
|
|
| dnaA |
PRK14086 |
chromosomal replication initiator protein DnaA; |
561-748 |
6.97e-03 |
|
chromosomal replication initiator protein DnaA;
Pssm-ID: 237605 [Multi-domain] Cd Length: 617 Bit Score: 40.58 E-value: 6.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 561 TKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT-PKEPEPTTPKEPEPtTPKKPEPT 639
Cdd:PRK14086 87 TVDPSAGEPAPPPPHARRTSEPELPRPGRRPYEGYGGPRADDRPPGLPRQDQLPTArPAYPAYQQRPEPGA-WPRAADDY 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 640 TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTpkEPEPTTPKKPEPTTTSPKTTTLKATTLAP 719
Cdd:PRK14086 166 GWQQQRLGFPPRAPYASPASYAPEQERDREPYDAGRPEYDQRRRDYDHP--RPDWDRPRRDRTDRPEPPPGAGHVHRGGP 243
|
170 180
....*....|....*....|....*....
gi 1907070839 720 KVTAPAEEIQNKPEETTPASEDSDDSKTT 748
Cdd:PRK14086 244 GPPERDDAPVVPIRPSAPGPLAAQPAPAP 272
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
637-692 |
7.23e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 40.37 E-value: 7.23e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070839 637 EPTTPKEPEPT---TPKEPEPTTPKEPEPTTPKEPEPTTRkEPEPTTPKEPEPTTPKEP 692
Cdd:COG5373 43 AASAPAEPEPEaaaAATAAAPEAAPAPVPEAPAAPPAAAE-APAPAAAAPPAEAEPAAA 100
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
448-516 |
7.36e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 40.37 E-value: 7.36e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070839 448 TRKEPEPTTPKEPEPTTPKEPEpttpkEPEPTTPKEPEPTTlKEPEPTTPKEPEPTTLKEPEPTTPKEP 516
Cdd:COG5373 38 AEAAEAASAPAEPEPEAAAAAT-----AAAPEAAPAPVPEA-PAAPPAAAEAPAPAAAAPPAEAEPAAA 100
|
|
| PRK12757 |
PRK12757 |
cell division protein FtsN; Provisional |
557-645 |
7.56e-03 |
|
cell division protein FtsN; Provisional
Pssm-ID: 237191 [Multi-domain] Cd Length: 256 Bit Score: 39.64 E-value: 7.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 557 EPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkePEPTTPkepePTTPKEPEPTTPKEPEPTTPKKP 636
Cdd:PRK12757 98 QPTQLSEVPYNEQTPQVPRSTVQIQQQAQQQQPPATTAQPQPVTP--PRQTTA----PVQPQTPAPVRTQPAAPVTQAVE 171
|
....*....
gi 1907070839 637 EPTTPKEPE 645
Cdd:PRK12757 172 APKVEAEKE 180
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
613-737 |
7.64e-03 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 40.45 E-value: 7.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 613 EPTTPKEPEPTTPKEP-EPTTPKKPEPTtPKEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKE 691
Cdd:PRK10263 338 EPVTQTPPVASVDVPPaQPTVAWQPVPG-PQTGEPVIAPAPEGYPQ-QSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQP 415
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1907070839 692 PEpttpkkpEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTP 737
Cdd:PRK10263 416 AQ-------QPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQS 454
|
|
| PRK10905 |
PRK10905 |
cell division protein DamX; Validated |
552-658 |
8.02e-03 |
|
cell division protein DamX; Validated
Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 39.92 E-value: 8.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 552 TPKEPEPTTTKEPESTTRKEPEPTTpkepepTTPKEPEpTTPKEPEpttpkEPEPTTPKEPEPTTPKEPepttPKEPEPT 631
Cdd:PRK10905 138 ASRQTAKTQTAERPATTRPARKQAV------IEPKKPQ-ATAKTEP-----KPVAQTPKRTEPAAPVAS----TKAPAAT 201
|
90 100
....*....|....*....|....*...
gi 1907070839 632 TPKKPEPTTPKEPEPT-TPKEPEPTTPK 658
Cdd:PRK10905 202 STPAPKETATTAPVQTaSPAQTTATPAA 229
|
|
| PHA03264 |
PHA03264 |
envelope glycoprotein D; Provisional |
455-556 |
8.29e-03 |
|
envelope glycoprotein D; Provisional
Pssm-ID: 223029 [Multi-domain] Cd Length: 416 Bit Score: 39.99 E-value: 8.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 455 TTPKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKE---PEPTTPK-----EPEPTTPKEPEP 526
Cdd:PHA03264 253 VVPPYFEESKGYEPPPA-PSGGSPAPPGDDRPEAKPEPGPVEDGAPGRETGGEgegPEPAGRDgaaggEPKPGPPRPAPD 331
|
90 100 110
....*....|....*....|....*....|
gi 1907070839 527 TTLKEPEPTTPKEPEPTtlkePEPTTPKEP 556
Cdd:PHA03264 332 ADRPEGWPSLEAITFPP----PTPATPAVP 357
|
|
| PRK13335 |
PRK13335 |
superantigen-like protein SSL3; Reviewed; |
592-690 |
8.37e-03 |
|
superantigen-like protein SSL3; Reviewed;
Pssm-ID: 139494 [Multi-domain] Cd Length: 356 Bit Score: 39.72 E-value: 8.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 592 TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTpkEPEPTTPKepePTTPKEPEPTTPKEPEPT 671
Cdd:PRK13335 73 TPKLEKAPNTNEEKTSASKIEKISQPKQEEQKSLNISATPAPKQEQSQT--TTESTTPK---TKVTTPPSTNTPQPMQST 147
|
90 100
....*....|....*....|
gi 1907070839 672 TRKEPE-PTTPKEPEPTTPK 690
Cdd:PRK13335 148 KSDTPQsPTIKQAQTDMTPK 167
|
|
| DUF6550 |
pfam20187 |
Family of unknown function (DUF6550); This family of proteins is functionally uncharacterized. ... |
544-631 |
8.38e-03 |
|
Family of unknown function (DUF6550); This family of proteins is functionally uncharacterized. This family of proteins is found in Firmicutes. Proteins in this family are approximately 180 amino acids in length. There are two conserved sequence motifs at the C-terminal: FGW/I and I/VGxM.
Pssm-ID: 466338 [Multi-domain] Cd Length: 190 Bit Score: 38.75 E-value: 8.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 544 TLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEpEPTTPKEPE--PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 621
Cdd:pfam20187 59 TDDKPGVSVQNITPDTSSNDPLDIAKSSGVEQTIQE-TPVKPAEPEkpDTAVDDHKPHVVPEEGRLTNPDTPPTYDKEPT 137
|
90
....*....|
gi 1907070839 622 PTTPKEPEPT 631
Cdd:pfam20187 138 EVKPKETEPK 147
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
562-620 |
9.02e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 40.37 E-value: 9.02e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907070839 562 KEPESTTRKEPEPT---TPKEPEPTTPKEPEPTTPKEPePTTPKEPEPTTPKEPEPTTPKEP 620
Cdd:COG5373 40 AAEAASAPAEPEPEaaaAATAAAPEAAPAPVPEAPAAP-PAAAEAPAPAAAAPPAEAEPAAA 100
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
452-527 |
9.29e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 39.67 E-value: 9.29e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070839 452 PEPTTPKEPEPTTPKePEPTTPKEPEPTTPKEPEPttlKEPEPTTPKEPEPTtlkEPEPTTPKEPEPTTPKEPEPT 527
Cdd:PTZ00144 122 GAPPAAAPAAAAAAK-AEKTTPEKPKAAAPTPEPP---AASKPTPPAAAKPP---EPAPAAKPPPTPVARADPRET 190
|
|
| GET2 |
pfam08690 |
GET complex subunit GET2; This family corresponds to the GET complex subunit GET2. The GET ... |
566-670 |
9.38e-03 |
|
GET complex subunit GET2; This family corresponds to the GET complex subunit GET2. The GET complex is involved in the retrieval of ER resident proteins from the Golgi. It forms a complex with GET1 and constitutes the ER membrane receptor for GET3. It facilitates the release of tail- anchored (TA) proteins from GET3 and mediates the subsequent entry into the ER membrane.
Pssm-ID: 400847 Cd Length: 308 Bit Score: 39.69 E-value: 9.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 566 STTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE-------------PTT 632
Cdd:pfam08690 39 STTSVLDEPAAPSTTPASTTASSSPSADEHDDPEIVDISEIASQPKKTASVPKKPPSSEESDPEnpqldqmfkqllgQQQ 118
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1907070839 633 PKKPEPTTPKEPEPTTP--------KEPEPTTPKEPEPTTPKEPEP 670
Cdd:pfam08690 119 QGGGENGQPAGSSTPDLfsqmmkmmMQGGGGGPDGAPGTSSNPAEP 164
|
|
| PHA03291 |
PHA03291 |
envelope glycoprotein I; Provisional |
590-669 |
9.40e-03 |
|
envelope glycoprotein I; Provisional
Pssm-ID: 223033 [Multi-domain] Cd Length: 401 Bit Score: 39.94 E-value: 9.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 590 PTTPKePEPTTPKEPEPTTPkepePTTPKEPEPTTPKEPEPTTPKkPEPTTPKEPEpTTPKEPEPTTPKEPEPTTPKEPE 669
Cdd:PHA03291 205 PATPR-PTPRTTASPETTPT----PSTTTSPPSTTIPAPSTTIAA-PQAGTTPEAE-GTPAPPTPGGGEAPPANATPAPE 277
|
|
| PHA03291 |
PHA03291 |
envelope glycoprotein I; Provisional |
598-677 |
9.65e-03 |
|
envelope glycoprotein I; Provisional
Pssm-ID: 223033 [Multi-domain] Cd Length: 401 Bit Score: 39.94 E-value: 9.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070839 598 PTTPKePEPTTPKEPEPTTPkepePTTPKEPEPTTPKKPEPTTPKePEPTTPKEPEpTTPKEPEPTTPKEPEPTTRKEPE 677
Cdd:PHA03291 205 PATPR-PTPRTTASPETTPT----PSTTTSPPSTTIPAPSTTIAA-PQAGTTPEAE-GTPAPPTPGGGEAPPANATPAPE 277
|
|
| |
