|
Name |
Accession |
Description |
Interval |
E-value |
| HX |
cd00094 |
Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. ... |
830-1091 |
1.75e-39 |
|
Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metalloproteinases (TIMPs). This CD contains 4 instances of the repeat.
Pssm-ID: 238046 [Multi-domain] Cd Length: 194 Bit Score: 145.15 E-value: 1.75e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 830 TNLCNGKPVDGLTTLRnGTLVAFRGHYFWMLNPFRPPSPPRRITEVW-GIPSPIDTVFTRCNcEGKTFFFKDSQYWRFTN 908
Cdd:cd00094 1 PDACDPLSFDAVTTLR-GELYFFKGRYFWRLSPGKPPGSPFLISSFWpSLPSPVDAAFERPD-TGKIYFFKGDKYWVYTG 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 909 DVVDPGYPKQIVK-GFGGLTGKIVAALSIAkykdRPESVYFFKrGGNIQQYTYKQEPMKKCTGRRPAinysvygeaaqvr 987
Cdd:cd00094 79 KNLEPGYPKPISDlGFPPTVKQIDAALRWP----DNGKTYFFK-GDKYWRYDEKTQKMDPGYPKLIE------------- 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 988 rrrferavgpfqthtfrihysvpmrvsyqdkgflhnevkvsTMWRGFPNVVTSAitlpnIRKPDGYdYYAFSKDQYYNID 1067
Cdd:cd00094 141 -----------------------------------------TDFPGVPDKVDAA-----FRWLDGY-YYFFKGDQYWRFD 173
|
250 260
....*....|....*....|....
gi 1907070847 1068 VPTRTARAITTRSGqtlSKIWYNC 1091
Cdd:cd00094 174 PRSKEVRVGYPLKI---SSDWLGC 194
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
317-632 |
7.13e-24 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 109.64 E-value: 7.13e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 317 STTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTtpkePEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPE 396
Cdd:PHA03247 2678 SPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPA----PHALVSATPLPPGPAAARQASPALPAAPAPP-AVPAGPATPG 2752
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 397 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPePTTLKEPEPTTPKEPEPTTPKEPE 476
Cdd:PHA03247 2753 GPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADP-PAAVLAPAAALPPAASPAGPLPPP 2831
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 477 PTTLKEPEPTTPKEPEPTT-----------LKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPttPK 545
Cdd:PHA03247 2832 TSAQPTAPPPPPGPPPPSLplggsvapggdVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPER--PP 2909
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 546 EPEPTTPKEPEPTTPKEPEPTtpkePEPTTPKEPEPTTPKKPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPT-T 623
Cdd:PHA03247 2910 QPQAPPPPQPQPQPPPPPQPQ----PPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQpWLGALVPGRVAVPRFRVPQPApS 2985
|
....*....
gi 1907070847 624 RKEPEPTTP 632
Cdd:PHA03247 2986 REAPASSTP 2994
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
323-648 |
4.35e-22 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 103.86 E-value: 4.35e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 323 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPePTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 402
Cdd:PHA03247 2712 PHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARP-PTTAGPPAPAPPAAPAAGPPRRLTRPAVAS 2790
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 403 PEPTTPKEPEPTTPKEPE----PTTPKEPEPTTPK--EPEPTTPKEPEPTTPKEPEPTTL------------KEPEPTTP 464
Cdd:PHA03247 2791 LSESRESLPSPWDPADPPaavlAPAAALPPAASPAgpLPPPTSAQPTAPPPPPGPPPPSLplggsvapggdvRRRPPSRS 2870
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 465 KEPEPTTPKEPEPTTLKEPEPTTPKE--PEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPT 542
Cdd:PHA03247 2871 PAAKPAAPARPPVRRLARPAVSRSTEsfALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPA 2950
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 543 TPKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPTTPKE-PEPTTPKKPEPTTPK--------------EPEPTTPKE---- 602
Cdd:PHA03247 2951 GAGEPSGAVPQpWLGALVPGRVAVPRFRVPQPAPSREaPASSTPPLTGHSLSRvsswasslalheetDPPPVSLKQtlwp 3030
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 1907070847 603 PEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTpKEPEPTTP 648
Cdd:PHA03247 3031 PDDTEDSDADSLFDSDSERSDLEALDPLPPEPHDPFA-HEPDPATP 3075
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
320-826 |
2.49e-21 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 101.17 E-value: 2.49e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 320 RKEPEPTTPKEPEPTtpKEPEPTTPKEPE-PTTPKEPEPTTLKEPEPTTPKEPEPTT----PKEPEPTTPKEPEPTTPKE 394
Cdd:PHA03247 2481 RRPAEARFPFAAGAA--PDPGGGGPPDPDaPPAPSRLAPAILPDEPVGEPVHPRMLTwirgLEELASDDAGDPPPPLPPA 2558
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 395 PEPTTPKEPEPTTPKEPEPTTP----KEPEPTTPkePEPTTPKEP--EPTTPKEPEPTTPKEPEPTTLKEPEPTtpkePE 468
Cdd:PHA03247 2559 APPAAPDRSVPPPRPAPRPSEPavtsRARRPDAP--PQSARPRAPvdDRGDPRGPAPPSPLPPDTHAPDPPPPS----PS 2632
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 469 PTTPKEPEPTTLKEPEPTTPKE-PEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEP 547
Cdd:PHA03247 2633 PAANEPDPHPPPTVPPPERPRDdPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAP 2712
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 548 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEP 627
Cdd:PHA03247 2713 HALVSATPLPPGPAAARQASPALPAAPAPP-AVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASL 2791
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 628 EPTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTPASEDSDDSKTTLKPqkptk 707
Cdd:PHA03247 2792 SESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRP----- 2866
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 708 apkptkkptkapkkptstkkPKTPKTRKPKTTPSPLKTTSATPELNTTPLEVMLPTTTIPKQtPNPETAEVNPDHEDADG 787
Cdd:PHA03247 2867 --------------------PSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERP-PQPQAPPPPQPQPQPPP 2925
|
490 500 510
....*....|....*....|....*....|....*....
gi 1907070847 788 GEGEKPLIPGPPVLFPTAIPGTDLLAGRLNQGININPML 826
Cdd:PHA03247 2926 PPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWL 2964
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
524-640 |
5.49e-19 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteristic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 84.33 E-value: 5.49e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 524 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEP 603
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907070847 604 EPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTP 640
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
340-453 |
6.11e-19 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteristic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 83.95 E-value: 6.11e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 340 EPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 419
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....
gi 1907070847 420 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 453
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEP 120
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
332-448 |
6.11e-19 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteristic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 83.95 E-value: 6.11e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 332 EPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 411
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907070847 412 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 448
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
324-440 |
6.11e-19 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteristic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 83.95 E-value: 6.11e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 324 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 403
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907070847 404 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 440
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
532-648 |
6.23e-19 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteristic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 83.95 E-value: 6.23e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 532 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEP 611
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907070847 612 EPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTP 648
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
364-477 |
6.29e-19 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteristic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 83.95 E-value: 6.29e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 364 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 443
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....
gi 1907070847 444 EPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEP 477
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEP 120
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
242-690 |
1.73e-18 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 91.92 E-value: 1.73e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 242 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE-----PPPTTKKPEPTTPKEPEPTTPKEPEPTTTKEPEPTTTKEPE 316
Cdd:PHA03247 2502 GPPDPDAPPAPSRLAPAILPDEPVGEPVHPRMLTwirglEELASDDAGDPPPPLPPAAPPAAPDRSVPPPRPAPRPSEPA 2581
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 317 STTRKE-----PEPTTPKEP--EPTTPKEPEPTTPKEPEPTTPKEPEPTtlKEPEPTTPKEPEPtTPKEPEPTTPKEPEP 389
Cdd:PHA03247 2582 VTSRARrpdapPQSARPRAPvdDRGDPRGPAPPSPLPPDTHAPDPPPPS--PSPAANEPDPHPP-PTVPPPERPRDDPAP 2658
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 390 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEP 469
Cdd:PHA03247 2659 GRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAA 2738
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 470 TTPKEPEPTTLKEPEPTTPKEPePTTLKEPEPTTPKEP---EPTTTKEPESTTRKEPEPTTPKEPEPT---------TPK 537
Cdd:PHA03247 2739 PAPPAVPAGPATPGGPARPARP-PTTAGPPAPAPPAAPaagPPRRLTRPAVASLSESRESLPSPWDPAdppaavlapAAA 2817
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 538 EPEPTTPK--EPEPTTPKEPEPTTPKEPEPTT--------------------PKEPEPTTPKEPEPTTPKKPEPTTPKEP 595
Cdd:PHA03247 2818 LPPAASPAgpLPPPTSAQPTAPPPPPGPPPPSlplggsvapggdvrrrppsrSPAAKPAAPARPPVRRLARPAVSRSTES 2897
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 596 EPTTPKEPEPttPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAP 675
Cdd:PHA03247 2898 FALPPDQPER--PPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVP 2975
|
490
....*....|....*.
gi 1907070847 676 AEEI-QNKPEETTPAS 690
Cdd:PHA03247 2976 RFRVpQPAPSREAPAS 2991
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
380-493 |
3.14e-18 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteristic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 82.02 E-value: 3.14e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 380 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEP 459
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....
gi 1907070847 460 EPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEP 493
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEP 120
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
356-472 |
4.41e-18 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteristic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 81.64 E-value: 4.41e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 356 EPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 435
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907070847 436 EPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTP 472
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
523-632 |
5.57e-18 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteristic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 81.25 E-value: 5.57e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 523 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKE 602
Cdd:pfam02389 14 QEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVPEPCHPKA 93
|
90 100 110
....*....|....*....|....*....|
gi 1907070847 603 PEPTTPKEPEPTTPKEPEPTTRKEPEPTTP 632
Cdd:pfam02389 94 PEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
323-432 |
6.19e-18 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteristic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 81.25 E-value: 6.19e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 323 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 402
Cdd:pfam02389 14 QEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVPEPCHPKA 93
|
90 100 110
....*....|....*....|....*....|
gi 1907070847 403 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 432
Cdd:pfam02389 94 PEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
500-616 |
6.37e-18 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteristic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 81.25 E-value: 6.37e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 500 EPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 579
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907070847 580 EPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 616
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| SO |
smart00201 |
Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from ... |
25-65 |
1.36e-17 |
|
Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from vitronectin, that is a growth hormone-dependent serum factor with protease-inhibiting activity.
Pssm-ID: 197571 Cd Length: 43 Bit Score: 77.03 E-value: 1.36e-17
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 1907070847 25 QELSCKGRCFESFARGRECDCDSQCKQYGKCCADYDSFCEE 65
Cdd:smart00201 1 AIGSCKGRCGESFNEGNACRCDALCLSYGDCCTDYESVCKK 41
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
396-509 |
1.57e-17 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteristic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 80.10 E-value: 1.57e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 396 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEP 475
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....
gi 1907070847 476 EPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEP 509
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEP 120
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
492-608 |
2.60e-17 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteristic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 79.33 E-value: 2.60e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 492 EPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 571
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907070847 572 EPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTP 608
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
369-488 |
7.76e-17 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteristic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 78.17 E-value: 7.76e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 369 KEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 448
Cdd:pfam02389 6 KQPCQPPP--QEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSP 83
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1907070847 449 KEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTP 488
Cdd:pfam02389 84 KVPEPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
345-464 |
8.14e-17 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteristic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 78.17 E-value: 8.14e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 345 KEPEPTTPKEPEPTTLKepEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 424
Cdd:pfam02389 6 KQPCQPPPQEPCVPTTK--EPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSP 83
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1907070847 425 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTP 464
Cdd:pfam02389 84 KVPEPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
404-516 |
8.71e-17 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteristic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 77.79 E-value: 8.71e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 404 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEP 483
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|...
gi 1907070847 484 EPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPE 516
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPE 119
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
460-576 |
9.42e-17 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteristic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 77.79 E-value: 9.42e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 460 EPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEP 539
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907070847 540 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 576
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
476-592 |
1.30e-16 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteristic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 77.40 E-value: 1.30e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 476 EPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 555
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907070847 556 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTP 592
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| Somatomedin_B |
pfam01033 |
Somatomedin B domain; |
28-65 |
2.83e-16 |
|
Somatomedin B domain;
Pssm-ID: 426004 Cd Length: 41 Bit Score: 73.17 E-value: 2.83e-16
10 20 30
....*....|....*....|....*....|....*....
gi 1907070847 28 SCKGRCFESFARGRE-CDCDSQCKQYGKCCADYDSFCEE 65
Cdd:pfam01033 2 SCKGRCGEGFDRGRSlCQCDDDCVSYGDCCPDYESLCLG 40
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
385-504 |
3.87e-16 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteristic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 76.25 E-value: 3.87e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 385 KEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTP 464
Cdd:pfam02389 6 KQPCQPPP--QEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSP 83
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1907070847 465 KEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTP 504
Cdd:pfam02389 84 KVPEPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
420-536 |
7.70e-16 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteristic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 75.09 E-value: 7.70e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 420 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEP 499
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907070847 500 EPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTP 536
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
319-644 |
7.95e-16 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 82.82 E-value: 7.95e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 319 TRKEPEPTTPKEP-EPTTPKEPE-PTTPKEP-EPTTPKEPEPTTLkepePTTPKEPE-PTTPKEP----EPTTPKEPE-P 389
Cdd:PTZ00449 576 SKKPEFPKDPKHPkDPEEPKKPKrPRSAQRPtRPKSPKLPELLDI----PKSPKRPEsPKSPKRPpppqRPSSPERPEgP 651
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 390 TTPKEPE-PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPePTTPKEPE 468
Cdd:PTZ00449 652 KIIKSPKpPKSPKPPFDPKFKEKFYDDYLDAAAKSKETKTTVVLDESFESILKETLPETPGTPFTTPRPLP-PKLPRDEE 730
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 469 P--TTPKEPEPTTLKEPEPTTPKEPEPTTLKEpepTTPKEPEPTTTKEPESTTRKEPEPTTPKEP--EPTTPKEPEPTTP 544
Cdd:PTZ00449 731 FpfEPIGDPDAEQPDDIEFFTPPEEERTFFHE---TPADTPLPDILAEEFKEEDIHAETGEPDEAmkRPDSPSEHEDKPP 807
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 545 KEpEPTTPKEPE-------PTTPKEPEP-TTPKEP--EPTTPKEPEP----TTPKKPEPTTPKEPEPTTPKEPEPTTPKE 610
Cdd:PTZ00449 808 GD-HPSLPKKRHrldglalSTTDLESDAgRIAKDAsgKIVKLKRSKSfddlTTVEEAEEMGAEARKIVVDDDGTEADDED 886
|
330 340 350
....*....|....*....|....*....|....
gi 1907070847 611 PEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPE 644
Cdd:PTZ00449 887 THPPEEKHKSEVRRRRPPKKPSKPKKPSKPKKPK 920
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
436-552 |
8.48e-16 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteristic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 75.09 E-value: 8.48e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 436 EPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEP 515
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907070847 516 ESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 552
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
444-560 |
8.65e-16 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteristic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 75.09 E-value: 8.65e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 444 EPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEP 523
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907070847 524 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 560
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
452-568 |
9.53e-16 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteristic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 75.09 E-value: 9.53e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 452 EPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEP 531
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907070847 532 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 568
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
428-544 |
1.58e-15 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteristic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 74.32 E-value: 1.58e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 428 EPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEP 507
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVP 86
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907070847 508 EPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTP 544
Cdd:pfam02389 87 EPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
321-416 |
3.26e-15 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteristic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 73.55 E-value: 3.26e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 321 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 400
Cdd:pfam02389 28 KVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKVPEPCHPKAPEPCHPKVPEPCYP 107
|
90
....*....|....*.
gi 1907070847 401 KEPEPTTPKEPEPTTP 416
Cdd:pfam02389 108 KAPEPCQPKVPEPCPS 123
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
317-690 |
1.00e-14 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 411408 [Multi-domain] Cd Length: 557 Bit Score: 78.66 E-value: 1.00e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 317 STTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPE 396
Cdd:NF033839 153 SGSSTKPETPQPENPEHQKPTTPAPDTKPSPQPEGKKPSVPDINQEKEKAKL-AVATYMSKILDDIQKHHLQKEKHRQIV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 397 PTTPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEP 475
Cdd:NF033839 232 ALIKELDELKKQALSEIDNVNtKVEIENTVHKIFADMDAVVTKFKKGLTQDTPKEPGNKKPSAPKPGMQPSPQPEKKEVK 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 476 EPTTLKEPEpTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPTTPKE 554
Cdd:NF033839 312 PEPETPKPE-VKPQLEKPKPEVKPQPEKPKPEVKPQLETPKPEVKPQPEKPKPEvKPQPEKPKPEVKPQPETPKPEVKPQ 390
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 555 PEPTTPK-EPEPTTPKEPEPTTPKEPEPTTPKKPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTPKEPE-PTTRKEPEPTT 631
Cdd:NF033839 391 PEKPKPEvKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPeVKPQPEKPKPEVKPQPEKPKPEVKPQPEtPKPEVKPQPEK 470
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070847 632 PKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTPAS 690
Cdd:NF033839 471 PKPEVKPQPEKPKPDNSKPQADDKKPSTPNNLSKDKQPSNQASTNEKATNKPKKSLPST 529
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
409-528 |
1.67e-14 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteristic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 71.24 E-value: 1.67e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 409 KEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTP 488
Cdd:pfam02389 6 KQPCQPPP--QEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSP 83
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1907070847 489 KEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTP 528
Cdd:pfam02389 84 KVPEPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
345-650 |
7.97e-14 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 76.27 E-value: 7.97e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 345 KEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEptTPKE-PEPTTPKEPEPTtpKEPEPTT 423
Cdd:PTZ00449 490 KKSKKKLAPIEEEDSDKHDEPPEGPEASGLPPKAPGDKEGEEGEHEDSKESD--EPKEgGKPGETKEGEVG--KKPGPAK 565
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 424 PKEPEPTTPKEPEPTTPKEPE-PTTPKEPEpttlKEPEPTTPKEP-EPTTPKEPE----PTTLKEPE-PTTPKEP----E 492
Cdd:PTZ00449 566 EHKPSKIPTLSKKPEFPKDPKhPKDPEEPK----KPKRPRSAQRPtRPKSPKLPElldiPKSPKRPEsPKSPKRPpppqR 641
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 493 PTTLKEPE-PTTPKEPEPTTTKEP-----------------ESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPePTTPKE 554
Cdd:PTZ00449 642 PSSPERPEgPKIIKSPKPPKSPKPpfdpkfkekfyddyldaAAKSKETKTTVVLDESFESILKETLPETPGTP-FTTPRP 720
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 555 PEPTTPKEPEP--TTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKePEPTTPKEPEPTTPKEPEPTTRKEPEPTTP 632
Cdd:PTZ00449 721 LPPKLPRDEEFpfEPIGDPDAEQPDDIEFFTPPEEERTFFHETPADTPL-PDILAEEFKEEDIHAETGEPDEAMKRPDSP 799
|
330
....*....|....*...
gi 1907070847 633 KEPEPTTPKEpEPTTPKK 650
Cdd:PTZ00449 800 SEHEDKPPGD-HPSLPKK 816
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
107-640 |
2.56e-13 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 74.97 E-value: 2.56e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 107 PttphskvttspkttAAKPVTPKPSLAPNSETSKEASLAsnkettvetkettatnkqssaskkktTSAKETRSaektsdk 186
Cdd:PHA03247 2557 P--------------AAPPAAPDRSVPPPRPAPRPSEPA--------------------------VTSRARRP------- 2589
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 187 DVEPTSTTPKNSAPTTTKKPVTTTKEPvpttpkepepttpkepppttkkpepttpkepepttpkepeptTPKEPEPTTPK 266
Cdd:PHA03247 2590 DAPPQSARPRAPVDDRGDPRGPAPPSP------------------------------------------LPPDTHAPDPP 2627
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 267 EPEPTTPKEPPPTTKKPEPTTPKEPEPTTPKEPEPTTTKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKE 346
Cdd:PHA03247 2628 PPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPT 2707
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 347 PEPttpkEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 426
Cdd:PHA03247 2708 PEP----APHALVSATPLPPGPAAARQASPALPAAPAPP-AVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRR 2782
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 427 PEPTTPKEPEPTTPKEPEPTTPKEPePTTLKEPEPTTPKEPEPTTPkEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKE 506
Cdd:PHA03247 2783 LTRPAVASLSESRESLPSPWDPADP-PAAVLAPAAALPPAASPAGP-LPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGG 2860
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 507 P----EPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPttPKEPEPTTPKEPEPTTPKEPEPTtpkePEPT 582
Cdd:PHA03247 2861 DvrrrPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPER--PPQPQAPPPPQPQPQPPPPPQPQ----PPPP 2934
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 583 TPKKPEPTTPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTRKEPEPTTPKE-PEPTTP 640
Cdd:PHA03247 2935 PPPRPQPPLAPTTDPAGAGEPSGAVPQpWLGALVPGRVAVPRFRVPQPAPSREaPASSTP 2994
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
325-726 |
3.36e-13 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 74.34 E-value: 3.36e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 325 PTTPKEPEPTTP-KEPEPTTPKEPEPTTPKE-PEPTTLKEPEPTTPKEPE--PTTPKEPE-PTTPKEP-EPTTPKEPE-P 397
Cdd:PTZ00449 521 PKAPGDKEGEEGeHEDSKESDEPKEGGKPGEtKEGEVGKKPGPAKEHKPSkiPTLSKKPEfPKDPKHPkDPEEPKKPKrP 600
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 398 TTPKEP-EPTTPKEPE----PTTPKEPE-PTTPKEPEPTTpkepEPTTPKEPE-PTTPKEPEPttlkepePTTPKEPEPT 470
Cdd:PTZ00449 601 RSAQRPtRPKSPKLPElldiPKSPKRPEsPKSPKRPPPPQ----RPSSPERPEgPKIIKSPKP-------PKSPKPPFDP 669
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 471 TPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPePTTPKEPEP--TTPKEPEPTTPKEPE 548
Cdd:PTZ00449 670 KFKEKFYDDYLDAAAKSKETKTTVVLDESFESILKETLPETPGTPFTTPRPLP-PKLPRDEEFpfEPIGDPDAEQPDDIE 748
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 549 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEpEPTTPKEPEPTTPKepepTTPKEPEPTTRKEPE 628
Cdd:PTZ00449 749 FFTPPEEERTFFHETPADTPLPDILAEEFKEEDIHAETGEPDEAMK-RPDSPSEHEDKPPG----DHPSLPKKRHRLDGL 823
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 629 PTTPKEPEpTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTPASEDsddsktTLKPQKPTKA 708
Cdd:PTZ00449 824 ALSTTDLE-SDAGRIAKDASGKIVKLKRSKSFDDLTTVEEAEEMGAEARKIVVDDDGTEADDED------THPPEEKHKS 896
|
410
....*....|....*...
gi 1907070847 709 PKPTKKPTKAPKKPTSTK 726
Cdd:PTZ00449 897 EVRRRRPPKKPSKPKKPS 914
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
396-611 |
8.42e-13 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 73.20 E-value: 8.42e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 396 EPTTPKEPEPTTPKEP-EPTTPKEPEPTtPKEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKE 474
Cdd:PRK10263 338 EPVTQTPPVASVDVPPaQPTVAWQPVPG-PQTGEPVIAPAPEGYPQ-QSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQP 415
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 475 PEPTTLKEPEPTTPKEPEPTtlkePEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 554
Cdd:PRK10263 416 AQQPYYAPAPEQPAQQPYYA----PAPEQPVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPVVE 491
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907070847 555 PEP----TTPKEPEPTTPKEPEPTTPKEPEPTTP-KKPEPTTPKEPEPTTPKEPEPTTPKEP 611
Cdd:PRK10263 492 PEPvveeTKPARPPLYYFEEVEEKRAREREQLAAwYQPIPEPVKEPEPIKSSLKAPSVAAVP 553
|
|
| HX |
smart00120 |
Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. ... |
882-926 |
3.06e-12 |
|
Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metalloproteinases (TIMPs).
Pssm-ID: 214524 [Multi-domain] Cd Length: 45 Bit Score: 61.87 E-value: 3.06e-12
10 20 30 40
....*....|....*....|....*....|....*....|....*
gi 1907070847 882 IDTVFTRCNceGKTFFFKDSQYWRFTNDVVDPGYPKQIVKGFGGL 926
Cdd:smart00120 1 IDAAFELRD--GKTYFFKGDKYWRFDPKRVDPGYPKLISSFFPGL 43
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
329-645 |
5.23e-12 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 70.59 E-value: 5.23e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 329 KEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT--PKEPEPTTPKE---- 402
Cdd:PHA03307 59 AAACDRFEPPTGPP-PGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTppPASPPPSPAPDlsem 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 403 --PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTL 480
Cdd:PHA03307 138 lrPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASA 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 481 KEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPE----PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 556
Cdd:PHA03307 218 SSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPApitlPTRIWEASGWNGPSSRPGPASSSSSPRERSPS 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 557 PTTPKEPEPTTPKEPEPTTPKEPEPTT-PKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEP 635
Cdd:PHA03307 298 PSPSSPGSGPAPSSPRASSSSSSSRESsSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSS 377
|
330
....*....|
gi 1907070847 636 EPTTPKEPEP 645
Cdd:PHA03307 378 PAASAGRPTR 387
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
364-587 |
8.23e-12 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 69.73 E-value: 8.23e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 364 EPTTPKEPEPTTPKEP-EPTTPKEPEPTtPKEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 442
Cdd:PRK10263 338 EPVTQTPPVASVDVPPaQPTVAWQPVPG-PQTGEPVIAPAPEGYPQ-QSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQP 415
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 443 PEPTTPKEPEPTTLKEPEPTtpkePEPTTPKEPEPTTLKEPEPttPKEPEPTTLKEPEPTTPKEPEPTTTKEPESttrkE 522
Cdd:PRK10263 416 AQQPYYAPAPEQPAQQPYYA----PAPEQPVAGNAWQAEEQQS--TFAPQSTYQTEQTYQQPAAQEPLYQQPQPV----E 485
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907070847 523 PEPTTPKEP--EPTTPKEPEPTTPKEPEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTPKKP 587
Cdd:PRK10263 486 QQPVVEPEPvvEETKPARPPLYYFEEVEEKRAREREQLAAwYQPIPEPVKEPEPIKSSLKAPSVAAVP 553
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
380-595 |
1.13e-11 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 69.34 E-value: 1.13e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 380 EPTTPKEPEPTTPKEP-EPTTPKEPEPTtPKEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKE 458
Cdd:PRK10263 338 EPVTQTPPVASVDVPPaQPTVAWQPVPG-PQTGEPVIAPAPEGYPQ-QSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQP 415
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 459 PEPTTPKEPEPTTPKEPEPTtlkePEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKE 538
Cdd:PRK10263 416 AQQPYYAPAPEQPAQQPYYA----PAPEQPVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPVVE 491
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907070847 539 PEP----TTPKEPEPTTPKEPEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKKPEPTTPKEP 595
Cdd:PRK10263 492 PEPvveeTKPARPPLYYFEEVEEKRAREREQLAAwYQPIPEPVKEPEPIKSSLKAPSVAAVP 553
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
323-644 |
9.33e-11 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 66.16 E-value: 9.33e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 323 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPttlKEPEPTTPKEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKE 402
Cdd:PRK07764 415 AAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAP---AGGAPSPPPAAAPSAQPAPAPAAA--PEPTAAPAPAPPAAPA 489
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 403 PEPTTPKEPEPTTP------------------------------KEPEPT-----------------------TPKEPE- 428
Cdd:PRK07764 490 PAAAPAAPAAPAAPagaddaatlrerwpeilaavpkrsrktwaiLLPEATvlgvrgdtlvlgfstgglarrfaSPGNAEv 569
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 429 -------------------PTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEP-TTPKEPEPTTLKEPEPTTP 488
Cdd:PRK07764 570 lvtalaeelggdwqveavvGPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPaGAAAAPAEASAAPAPGVAA 649
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 489 KEPEPTTLKEPEPTTPKEPEPtttkePESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 568
Cdd:PRK07764 650 PEHHPKHVAVPDASDGGDGWP-----AKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQA 724
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070847 569 KEPEPTTPKEPEPTTPKKPEPTTPKEPEPtTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTP---KEPEPTTPKEPE 644
Cdd:PRK07764 725 AQGASAPSPAADDPVPLPPEPDDPPDPAG-APAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEddaPSMDDEDRRDAE 802
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
322-645 |
9.65e-11 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 66.16 E-value: 9.65e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 322 EPEPT-TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkePEPTTP 400
Cdd:PRK07764 405 APAAApAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPS---PAGNAPAGGAPSPPPAAAPSAQPAPAPAAA--PEPTAA 479
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 401 KEPEPTTPKEPEPTTPKEPEPTTP------------------------------KEPEPT-------------------- 430
Cdd:PRK07764 480 PAPAPPAAPAPAAAPAAPAAPAAPagaddaatlrerwpeilaavpkrsrktwaiLLPEATvlgvrgdtlvlgfstgglar 559
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 431 ---TPKEPE--------------------PTTPKEPEPTTPKEPEPttlKEPEPTTPKEPEPTTPKEPEPTtlkePEPTT 487
Cdd:PRK07764 560 rfaSPGNAEvlvtalaeelggdwqveavvGPAPGAAGGEGPPAPAS---SGPPEEAARPAAPAAPAAPAAP----APAGA 632
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 488 PKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKE---PEPTTPKEPEPTTPKEPEPTTPKEPE 564
Cdd:PRK07764 633 AAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPapaPAAPAAPAGAAPAQPAPAPAATPPAG 712
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 565 PTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPE 644
Cdd:PRK07764 713 QADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAPS 792
|
.
gi 1907070847 645 P 645
Cdd:PRK07764 793 M 793
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
368-609 |
1.69e-10 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 64.95 E-value: 1.69e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 368 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEptTPKEPEPTTPKEPEPTTPKEP-EPTTPKEPEPTTPKEPEPT----TPKE 442
Cdd:PLN03209 330 PKESDAADGPKPVPTKPVTPEAPSPPIEE--EPPQPKAVVPRPLSPYTAYEDlKPPTSPIPTPPSSSPASSKsvdaVAKP 407
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 443 PEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKE 522
Cdd:PLN03209 408 AEPDVVPSPGSASNVPEVEPAQVEAKKTRPLSPYARYEDLKPPTSPSPTAPTGVSPSVSSTSSVPAVPDTAPATAATDAA 487
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 523 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTP--KEPEPTTP 600
Cdd:PLN03209 488 APPPANMRPLSPYAVYDDLKPPTSPSPAAPVGKVAPSSTNEVVKVGNSAPPTALADEQHHAQPKPRPLSPytMYEDLKPP 567
|
....*....
gi 1907070847 601 KEPEPTTPK 609
Cdd:PLN03209 568 TSPTPSPVL 576
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
320-628 |
3.94e-10 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 64.24 E-value: 3.94e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 320 RKEPEPTTPKEPEPTTPkepEPTTPKEPEPTTPKEPEPTtlKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 399
Cdd:PRK07764 428 APQPAPAPAPAPAPPSP---AGNAPAGGAPSPPPAAAPS--AQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAA 502
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 400 P------------------------------KEPEPT-----------------------TPKEPE-------------- 412
Cdd:PRK07764 503 PagaddaatlrerwpeilaavpkrsrktwaiLLPEATvlgvrgdtlvlgfstgglarrfaSPGNAEvlvtalaeelggdw 582
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 413 ------PTTPKEPEPTTPKEPEPTTPKE--PEPTTPKEPEPTTPKEPEPTTlKEPEPTTPKEPEPTTPKEPEPTTLKEPE 484
Cdd:PRK07764 583 qveavvGPAPGAAGGEGPPAPASSGPPEeaARPAAPAAPAAPAAPAPAGAA-AAPAEASAAPAPGVAAPEHHPKHVAVPD 661
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 485 PTTPKEPEPTTLKEPEPTTPKEPEPtttkePESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 564
Cdd:PRK07764 662 ASDGGDGWPAKAGGAAPAAPPPAPA-----PAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAAD 736
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070847 565 PTTPKEPEPTTPKEPEPtTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP---KEPEPTTRKEPE 628
Cdd:PRK07764 737 DPVPLPPEPDDPPDPAG-APAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEddaPSMDDEDRRDAE 802
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
416-605 |
5.37e-10 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 63.44 E-value: 5.37e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 416 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTlkEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTT 495
Cdd:PRK14948 363 AFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAAT--TPSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLN 440
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 496 LKEPEPTTPKEPEPTTTK------------EPESTT-----------------------------------RKEPEPTTP 528
Cdd:PRK14948 441 LEELWQQILAKLELPSTRmllsqqaelvslDSNRAViavspnwlgmvqsrkplleqafakvlgrsiklnleSQSGSASNT 520
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070847 529 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKePEPTTPKEPEP 605
Cdd:PRK14948 521 AKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPT-PSPTKDSSPEE 596
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
400-581 |
5.42e-10 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 63.44 E-value: 5.42e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 400 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkePEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTT 479
Cdd:PRK14948 363 AFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATT--PSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLN 440
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 480 LKE---------PEPTT-------------------------------PKEPEPTT---------------LKEPEPTTP 504
Cdd:PRK14948 441 LEElwqqilaklELPSTrmllsqqaelvsldsnraviavspnwlgmvqSRKPLLEQafakvlgrsiklnleSQSGSASNT 520
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070847 505 KEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPEP 581
Cdd:PRK14948 521 AKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPT-PSPTKDSSPEE 596
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
325-648 |
5.49e-10 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 63.47 E-value: 5.49e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 325 PTTPKEPEPTTPKEPEPTTPKEPEPTtPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPkepEPTTPKEPEPTTPKEPE 404
Cdd:PRK07764 386 GVAGGAGAPAAAAPSAAAAAPAAAPA-PAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSP---AGNAPAGGAPSPPPAAA 461
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 405 PTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTP------------------------------KEPEPT 454
Cdd:PRK07764 462 PSAQPAPAPAAA--PEPTAAPAPAPPAAPAPAAAPAAPAAPAAPagaddaatlrerwpeilaavpkrsrktwaiLLPEAT 539
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 455 ---------TLKEPEP----------------------------------TTPKEPEPTTPKEPE----PTTLKEPEPTT 487
Cdd:PRK07764 540 vlgvrgdtlVLGFSTGglarrfaspgnaevlvtalaeelggdwqveavvgPAPGAAGGEGPPAPAssgpPEEAARPAAPA 619
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 488 PKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 567
Cdd:PRK07764 620 APAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPA 699
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 568 PKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEP-------TTPKEPEPTTRKEPEPTTPKEPEPTTP 640
Cdd:PRK07764 700 QPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPddppdpaGAPAQPPPPPAPAPAAAPAAAPPPSPP 779
|
....*...
gi 1907070847 641 KEPEPTTP 648
Cdd:PRK07764 780 SEEEEMAE 787
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
358-689 |
6.89e-10 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 63.55 E-value: 6.89e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 358 TTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 437
Cdd:PHA03378 522 ATLLPPSPPQPRAGRRAPCVYTEDLDIESDEPASTEPVHDQLLPAPGLG-PLQIQPLTSPTTSQLASSAPSYAQTPWPVP 600
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 438 TTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEP---EPTTLKEPEPTTPKEPEPTTTKE 514
Cdd:PHA03378 601 HPSQTPEPPTTQSHIPETSAPRQWPMPLRPIPMRPLRMQPITFNVLVFPTPHQPpqvEITPYKPTWTQIGHIPYQPSPTG 680
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 515 PESTTRKEPEPTTPKEPepttPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKE 594
Cdd:PHA03378 681 ANTMLPIQWAPGTMQPP----PRAPTPMRPPAAPPGRAQRPAAATGRARPPAAAPGRARPPAAAPGRARPPAAAPGRARP 756
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 595 PEPT-TPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVT 673
Cdd:PHA03378 757 PAAApGRARPPAAAPGAPTPQPPPQAPPAPQQRPRGAPTPQPPPQAGPTSMQLMPRAAPGQQGPTKQILRQLLTGGVKRG 836
|
330
....*....|....*.
gi 1907070847 674 APAEEIQNKPEETTPA 689
Cdd:PHA03378 837 RPSLKKPAALERQAAA 852
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
376-565 |
7.57e-10 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 63.06 E-value: 7.57e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 376 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 455
Cdd:PRK14948 363 AFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATT--PSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLN 440
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 456 LKE---------PEPTT-------------------------------PKEPEPTTPKEP---EPTTL----KEPEPTTP 488
Cdd:PRK14948 441 LEElwqqilaklELPSTrmllsqqaelvsldsnraviavspnwlgmvqSRKPLLEQAFAKvlgRSIKLnlesQSGSASNT 520
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070847 489 KEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPEP 565
Cdd:PRK14948 521 AKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPT-PSPTKDSSPEE 596
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
333-698 |
7.78e-10 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 63.08 E-value: 7.78e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 333 PTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 412
Cdd:PRK07764 386 GVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQ 465
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 413 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTP----------------KEPEPtTPKEPE 476
Cdd:PRK07764 466 PAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAATLRERWPeilaavpkrsrktwaiLLPEA-TVLGVR 544
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 477 PTTL----------------KEPE--------------------PTTPKEPEPTTLKEPEPTTPKE--PEPTTTKEPEST 518
Cdd:PRK07764 545 GDTLvlgfstgglarrfaspGNAEvlvtalaeelggdwqveavvGPAPGAAGGEGPPAPASSGPPEeaARPAAPAAPAAP 624
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 519 TRKEPePTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE-PEPTTPKKPEPTTPKEPEP 597
Cdd:PRK07764 625 AAPAP-AGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPaPAPAAPAAPAGAAPAQPAP 703
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 598 TTPKEPEPTTPKEPEPTTPKEPEPTTRKePEPTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAE 677
Cdd:PRK07764 704 APAATPPAGQADDPAAQPPQAAQGASAP-SPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEE 782
|
410 420
....*....|....*....|.
gi 1907070847 678 EIQNKPEETTPASEDSDDSKT 698
Cdd:PRK07764 783 EEMAEDDAPSMDDEDRRDAEE 803
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
344-522 |
7.92e-10 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 62.96 E-value: 7.92e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 344 PKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 423
Cdd:PRK07994 361 PAAPLPEPEVPPQSAA---PAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATK 437
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 424 PKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTLkePEPTTPKEPEPTTPKEPEPTtlKEPEPTTPKEPEPTTLKEpeptt 503
Cdd:PRK07994 438 AKKSEPAAASRARPV-NSALERLASVRPAPSAL--EKAPAKKEAYRWKATNPVEV--KKEPVATPKALKKALEHE----- 507
|
170
....*....|....*....
gi 1907070847 504 pKEPEPTTTKEPESTTRKE 522
Cdd:PRK07994 508 -KTPELAAKLAAEAIERDP 525
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
460-648 |
9.61e-10 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 63.18 E-value: 9.61e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 460 EPTTPKEPEPTTPKEP-EPTTLKEPEPTtPKEPEPTTLKEPEPTTPkEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKE 538
Cdd:PRK10263 338 EPVTQTPPVASVDVPPaQPTVAWQPVPG-PQTGEPVIAPAPEGYPQ-QSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQP 415
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 539 PE----PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPttPKEPEPT---TPKKPEPTTPKEPE-PTTPKEPEPTTPKE 610
Cdd:PRK10263 416 AQqpyyAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQS--TFAPQSTyqtEQTYQQPAAQEPLYqQPQPVEQQPVVEPE 493
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1907070847 611 P--EPTTPKEP---------EPTTRKEPEPTTPKEPEPTTPKEPEPTTP 648
Cdd:PRK10263 494 PvvEETKPARPplyyfeeveEKRAREREQLAAWYQPIPEPVKEPEPIKS 542
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
336-485 |
1.19e-09 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 62.19 E-value: 1.19e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 336 PKEPEPTTPKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 415
Cdd:PRK07994 361 PAAPLPEPEVPPQSAAPAASAQAT---AAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATK 437
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907070847 416 PKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTT----PKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEP 485
Cdd:PRK07994 438 AKKSEPAAASRARPV-NSALERLASVRPAPSAlekaPAKKEAYRWKATNPVEVKKEPVATPKALKKALEHEKTP 510
|
|
| Hemopexin |
pfam00045 |
Hemopexin; Hemopexin is a heme-binding protein that transports heme to the liver. ... |
882-919 |
1.45e-09 |
|
Hemopexin; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metallopeptidases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metallopeptidases (TIMPs).
Pssm-ID: 395000 [Multi-domain] Cd Length: 44 Bit Score: 54.49 E-value: 1.45e-09
10 20 30
....*....|....*....|....*....|....*...
gi 1907070847 882 IDTVFTRCNceGKTFFFKDSQYWRFTNDVVDPGYPKQI 919
Cdd:pfam00045 1 IDAAFEDRD--GKTYFFKGRKYWRFDPQRVEPGYPKLI 36
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
323-648 |
1.54e-09 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 62.50 E-value: 1.54e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 323 PEPTTPKEPEPTTPKEPEPTTpkePEPTTPKEPEPTTLKEPEPTTPKEPEPttpkePEPTTPKEPEPTTPKEPEPTTPKE 402
Cdd:PHA03307 100 PAREGSPTPPGPSSPDPPPPT---PPPASPPPSPAPDLSEMLRPVGSPGPP-----PAASPPAAGASPAAVASDAASSRQ 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 403 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKE 482
Cdd:PHA03307 172 AALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGP 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 483 PEPTTPKEPEPTTLKEP--EPTTPKEPEPTTTKEPESTTRKEPEPttpkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 560
Cdd:PHA03307 252 ENECPLPRPAPITLPTRiwEASGWNGPSSRPGPASSSSSPRERSP----SPSPSSPGSGPAPSSPRASSSSSSSRESSSS 327
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 561 KePEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP--TTRKEPEPTTPKEPEPT 638
Cdd:PHA03307 328 S-TSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRrrARAAVAGRARRRDATGR 406
|
330
....*....|
gi 1907070847 639 TPKEPEPTTP 648
Cdd:PHA03307 407 FPAGRPRPSP 416
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
378-759 |
1.60e-09 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 411408 [Multi-domain] Cd Length: 557 Bit Score: 61.71 E-value: 1.60e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 378 EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLK 457
Cdd:NF033839 158 KPETPQPENPEHQKPTTPAPDTKPSPQPEGKKPSVPDINQEKEKAKL-AVATYMSKILDDIQKHHLQKEKHRQIVALIKE 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 458 EPEPTTPKEPEPTTPK-EPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTP 536
Cdd:NF033839 237 LDELKKQALSEIDNVNtKVEIENTVHKIFADMDAVVTKFKKGLTQDTPKEPGNKKPSAPKPGMQPSPQPEKKEVKPEPET 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 537 KEPEpTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK-KPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 615
Cdd:NF033839 317 PKPE-VKPQLEKPKPEVKPQPEKPKPEVKPQLETPKPEVKPQPEKPKPEvKPQPEKPKPEVKPQPETPKPEVKPQPEKPK 395
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 616 PK-EPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTaPAEEIQNKPEETTPASEDSD 694
Cdd:NF033839 396 PEvKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVK-PQPETPKPEVKPQPEKPKPE 474
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1907070847 695 DSKTTLKPQKPTKAPKPTKKPTKAPKKPTSTKKPKTPKTRKPKTTPSPLKTTSATPELNTTPLEV 759
Cdd:NF033839 475 VKPQPEKPKPDNSKPQADDKKPSTPNNLSKDKQPSNQASTNEKATNKPKKSLPSTGSISNLALEI 539
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
416-648 |
1.67e-09 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 61.87 E-value: 1.67e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 416 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEptTPKEPEPTTLKEPEPTTPKEP-EPTTPKEPEPTTLKEPEPTtpkePEPT 494
Cdd:PLN03209 330 PKESDAADGPKPVPTKPVTPEAPSPPIEE--EPPQPKAVVPRPLSPYTAYEDlKPPTSPIPTPPSSSPASSK----SVDA 403
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 495 TLKEPEPTTPKEPEPTTT---KEPESTTRKEPEPTTP--KEPEPTTPKEPEPTTPKEPEPTTPKepEPTTPKEPEPTTPK 569
Cdd:PLN03209 404 VAKPAEPDVVPSPGSASNvpeVEPAQVEAKKTRPLSPyaRYEDLKPPTSPSPTAPTGVSPSVSS--TSSVPAVPDTAPAT 481
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070847 570 EPEPTTPKEPEPTTPKKPEPTTPKEPEPTTpkePEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTP 648
Cdd:PLN03209 482 AATDAAAPPPANMRPLSPYAVYDDLKPPTS---PSPAAPVGKVAPSSTNEVVKVGNSAPPTALADEQHHAQPKPRPLSP 557
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
371-538 |
3.37e-09 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 61.03 E-value: 3.37e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 371 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP-KEPEPTTPKEPEPTTP--KEPEPTTPKEPEPTT 447
Cdd:PRK07994 366 PEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPaVPLPETTSQLLAARQQlqRAQGATKAKKSEPAA 445
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 448 PKEPEPTTlKEPEPTTPKEPEPTTPkePEPTTLKEPEPTTPKEPEPTtlKEPEPTTPKEPEPTTTKEpesttrKEPEPTT 527
Cdd:PRK07994 446 ASRARPVN-SALERLASVRPAPSAL--EKAPAKKEAYRWKATNPVEV--KKEPVATPKALKKALEHE------KTPELAA 514
|
170
....*....|.
gi 1907070847 528 PKEPEPTTPKE 538
Cdd:PRK07994 515 KLAAEAIERDP 525
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
540-626 |
3.49e-09 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 60.97 E-value: 3.49e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 540 EPTTPKEPEPTTPKEPEPTTPKepepttPKEPEPTTPKEPEPTTPKKPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPKEP 619
Cdd:PRK15313 559 EPDEPIIPDPVDPVIPDPVIPD------PVDPDPVDPVIPDPVIPDPVDPD-PVDPEPVDPVIPDPTIPDIGQSDTPPIT 631
|
....*..
gi 1907070847 620 EPTTRKE 626
Cdd:PRK15313 632 EHQFRPE 638
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
440-621 |
4.95e-09 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 60.36 E-value: 4.95e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 440 PKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTlkEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTT 519
Cdd:PRK14948 363 AFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAAT--TPSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLN 440
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 520 RKE---------PEPTT-------------------------------PKEPEPTTP---------------KEPEPTTP 544
Cdd:PRK14948 441 LEElwqqilaklELPSTrmllsqqaelvsldsnraviavspnwlgmvqSRKPLLEQAfakvlgrsiklnlesQSGSASNT 520
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070847 545 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPEP 621
Cdd:PRK14948 521 AKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPT-PSPTKDSSPEE 596
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
453-648 |
6.41e-09 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 59.89 E-value: 6.41e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 453 PTTLKEPEPTTPKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPE 532
Cdd:PRK12323 375 ATAAAAPVAQPAPAAAAPAAAAPAPAA---PPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPA 451
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 533 PTTPKEPEPTTP---KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEP--TTPKEPEPTTPKEPEPTT 607
Cdd:PRK12323 452 PAPAAAPAAAARpaaAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPaqPDAAPAGWVAESIPDPAT 531
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 1907070847 608 PKEPEPTTPKEPEPTTRKEPEPTTPKEPE--PTTPKEPEPTTP 648
Cdd:PRK12323 532 ADPDDAFETLAPAPAAAPAPRAAAATEPVvaPRPPRASASGLP 574
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
322-648 |
7.05e-09 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 60.18 E-value: 7.05e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 322 EPEPTTPKEPEPTT--PKEPEPTTPKEPEPTTPKEPEPTtlKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 399
Cdd:PHA03307 107 TPPGPSSPDPPPPTppPASPPPSPAPDLSEMLRPVGSPG--PPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETAR 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 400 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTT 479
Cdd:PHA03307 185 APSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPIT 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 480 LKEP--EPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpkepeP 557
Cdd:PHA03307 265 LPTRiwEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRG-----A 339
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 558 TTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEP--TTPKEPEPTTPKE-PEPTTRKEPEPTTPKE 634
Cdd:PHA03307 340 AVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRrrARAAVAGRARRRDaTGRFPAGRPRPSPLDA 419
|
330
....*....|....
gi 1907070847 635 PEptTPKEPEPTTP 648
Cdd:PHA03307 420 GA--ASGAFYARYP 431
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
323-648 |
7.56e-09 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 60.00 E-value: 7.56e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 323 PEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTPk 401
Cdd:PRK07764 396 AAAPSAAAAAPA-AAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNApAGGAPSPPPAAAPSAQPAPAPAAA- 473
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 402 ePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP-------------TTPKEPEPTTP-KEPEPT---------TLKE 458
Cdd:PRK07764 474 -PEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDaatlrerwpeilaAVPKRSRKTWAiLLPEATvlgvrgdtlVLGF 552
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 459 PEP----------------------------------TTPKEPEPTTPKEPEPTTLKE--PEPTTPKEPEPTtlkePEPT 502
Cdd:PRK07764 553 STGglarrfaspgnaevlvtalaeelggdwqveavvgPAPGAAGGEGPPAPASSGPPEeaARPAAPAAPAAP----AAPA 628
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 503 TPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPT 582
Cdd:PRK07764 629 PAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPA--PAAPAAPAGAAPAQPAPAPA 706
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070847 583 TPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTP 648
Cdd:PRK07764 707 ATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAA 772
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
524-613 |
8.09e-09 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 59.81 E-value: 8.09e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 524 EPTTPKEPEPTTPKEPEPTTPKepepttPKEPEPTTPKEPEPTTPKEPEPtTPKEPEPTTPKKPEPTTPKEPEPTTPkep 603
Cdd:PRK15313 559 EPDEPIIPDPVDPVIPDPVIPD------PVDPDPVDPVIPDPVIPDPVDP-DPVDPEPVDPVIPDPTIPDIGQSDTP--- 628
|
90
....*....|
gi 1907070847 604 ePTTPKEPEP 613
Cdd:PRK15313 629 -PITEHQFRP 637
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
364-453 |
9.43e-09 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 59.81 E-value: 9.43e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 364 EPTTPKEPEPTTPKEPEPTTPKepepttPKEPEPTTPKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPkep 443
Cdd:PRK15313 559 EPDEPIIPDPVDPVIPDPVIPD------PVDPDPVDPVIPDPVIPDPVDPD-PVDPEPVDPVIPDPTIPDIGQSDTP--- 628
|
90
....*....|
gi 1907070847 444 ePTTPKEPEP 453
Cdd:PRK15313 629 -PITEHQFRP 637
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
317-648 |
1.42e-08 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 59.03 E-value: 1.42e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 317 STTRKEPEPTTPKEPEPTTPKE--PEPTTPKEPEPTTPKEPEPTTLKEPE----PTTPKEPEPTTPKEPEPTTPKEPEPT 390
Cdd:PHA03307 112 SSPDPPPPTPPPASPPPSPAPDlsEMLRPVGSPGPPPAASPPAAGASPAAvasdAASSRQAALPLSSPEETARAPSSPPA 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 391 TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEP--E 468
Cdd:PHA03307 192 EPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRiwE 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 469 PTTPKEPEPTTLKEPEPTTPKEPEPttlkEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKePEPTTPKEPEPTTPKEPE 548
Cdd:PHA03307 272 ASGWNGPSSRPGPASSSSSPRERSP----SPSPSSPGSGPAPSSPRASSSSSSSRESSSSS-TSSSSESSRGAAVSPGPS 346
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 549 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEP--TTPKEPEPTTPKEPEPTTPKEPEPTTPkepePTTRKE 626
Cdd:PHA03307 347 PSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRrrARAAVAGRARRRDATGRFPAGRPRPSP----LDAGAA 422
|
330 340
....*....|....*....|..
gi 1907070847 627 PEPTTPKEPEPTTPKEPEPTTP 648
Cdd:PHA03307 423 SGAFYARYPLLTPSGEPWPGSP 444
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
532-621 |
1.78e-08 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 58.66 E-value: 1.78e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 532 EPTTPKEPEPTTPKEPEPTTPKepepttPKEPEPTTPKEPEPTTPKEPEPtTPKKPEPTTPKEPEPTTPKEPEPTTPkep 611
Cdd:PRK15313 559 EPDEPIIPDPVDPVIPDPVIPD------PVDPDPVDPVIPDPVIPDPVDP-DPVDPEPVDPVIPDPTIPDIGQSDTP--- 628
|
90
....*....|
gi 1907070847 612 ePTTPKEPEP 621
Cdd:PRK15313 629 -PITEHQFRP 637
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
384-554 |
1.94e-08 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 58.34 E-value: 1.94e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 384 PKEPEPTTPKEPEPTTPKEPEPTTPkepEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTT 463
Cdd:PRK07994 361 PAAPLPEPEVPPQSAAPAASAQATA---APTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATK 437
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 464 PKEPEPTTPKEPEPTTlKEPEPTTPKEPEPTTLkePEPTTPKEPEPTTTKEPESTtrKEPEPTTPKEPEP--TTPKEPEP 541
Cdd:PRK07994 438 AKKSEPAAASRARPVN-SALERLASVRPAPSAL--EKAPAKKEAYRWKATNPVEV--KKEPVATPKALKKalEHEKTPEL 512
|
170
....*....|...
gi 1907070847 542 TTPKEPEPTTPKE 554
Cdd:PRK07994 513 AAKLAAEAIERDP 525
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
405-608 |
2.10e-08 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 58.35 E-value: 2.10e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 405 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTtlkEPEPTTPKEPEPTTPKEPEPTTLKEPE 484
Cdd:PRK12323 375 ATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPA---RRSPAPEALAAARQASARGPGGAPAPA 451
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 485 PTTPKEPEPTTlkepePTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEP--TTPKEPEPTTPKE 562
Cdd:PRK12323 452 PAPAAAPAAAA-----RPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPaqPDAAPAGWVAESI 526
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1907070847 563 PEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPE--PTTPKEPEPTTP 608
Cdd:PRK12323 527 PDPATADPDDAFETLAPAPAAAPAPRAAAATEPVvaPRPPRASASGLP 574
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
464-634 |
2.33e-08 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 57.95 E-value: 2.33e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 464 PKEPEPTTPKEPEPTTlkepePTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTP--KEPEP 541
Cdd:PRK07994 361 PAAPLPEPEVPPQSAA-----PAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQlqRAQGA 435
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 542 TTPKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKEPepttPKKPEPTTPKEPEPTTPKEPEPTTPKEPEP--TTPKEP 619
Cdd:PRK07994 436 TKAKKSEPAAASRARPV-NSALERLASVRPAPSALEKA----PAKKEAYRWKATNPVEVKKEPVATPKALKKalEHEKTP 510
|
170
....*....|....*
gi 1907070847 620 EPTTRKEPEPTTPKE 634
Cdd:PRK07994 511 ELAAKLAAEAIERDP 525
|
|
| MSCRAMM_ClfB |
NF033845 |
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial ... |
328-601 |
2.47e-08 |
|
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 411414 [Multi-domain] Cd Length: 871 Bit Score: 58.42 E-value: 2.47e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 328 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTtlKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 407
Cdd:NF033845 543 PKDPTPGPPVDPEPSPEPEPEPTPDPEPSPD--PDPEPSPDPDPDSDSDSDSGSDSDSGSDSDSDSDSDSDSDSDSDSDS 620
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 408 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTT 487
Cdd:NF033845 621 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 700
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 488 PKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 567
Cdd:NF033845 701 SSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 780
|
250 260 270
....*....|....*....|....*....|....
gi 1907070847 568 PKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPK 601
Cdd:NF033845 781 DSDSDSDSDSDSDSDSDSRVTPPNNEQKAPSNPK 814
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
325-523 |
2.60e-08 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 57.96 E-value: 2.60e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 325 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 404
Cdd:PRK12323 375 ATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAA---PAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPA 451
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 405 PTTPKEPEPTTP---KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEP--TTPKEPEPTTPKEPEPTT 479
Cdd:PRK12323 452 PAPAAAPAAAARpaaAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPaqPDAAPAGWVAESIPDPAT 531
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 1907070847 480 LKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEP 523
Cdd:PRK12323 532 ADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPD 575
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
373-544 |
2.66e-08 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 58.13 E-value: 2.66e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 373 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpkEPEPTTPKEPEPTTpkEPEPTTPKEPEPTTPkEPE 452
Cdd:PRK10811 846 PVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVV--EAVAEVVEEPVVVA--EPQPEEVVVVETTHP-EVI 920
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 453 PTTLKEPEPTTPKEPEPTTPKEPEpttlkEPEPTTPKEPEPTTLKEPEPTTPKEP-EPTTTKEPESTTRKEPEPTTPKEP 531
Cdd:PRK10811 921 AAPVTEQPQVITESDVAVAQEVAE-----HAEPVVEPQDETADIEEAAETAEVVVaEPEVVAQPAAPVVAEVAAEVETVT 995
|
170
....*....|...
gi 1907070847 532 EPTTPKEPEPTTP 544
Cdd:PRK10811 996 AVEPEVAPAQVPE 1008
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
448-626 |
2.67e-08 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 57.95 E-value: 2.67e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 448 PKEPEPTTlkePEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTT 527
Cdd:PRK07994 361 PAAPLPEP---EVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATK 437
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 528 PKEPEPTTPKEPEPtTPKEPEPTTPKEPEPTTPKEPepttPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEpeptt 607
Cdd:PRK07994 438 AKKSEPAAASRARP-VNSALERLASVRPAPSALEKA----PAKKEAYRWKATNPVEVKKEPVATPKALKKALEHE----- 507
|
170
....*....|....*....
gi 1907070847 608 pKEPEPTTPKEPEPTTRKE 626
Cdd:PRK07994 508 -KTPELAAKLAAEAIERDP 525
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
328-569 |
3.00e-08 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 57.63 E-value: 3.00e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 328 PKEPEPTTPKEPEPTTPKepePTTPKEPEPTTLKEPEPTTPKEPEPTTP-------KEPEPTTPKEPEPTTPKEPEPTT- 399
Cdd:PLN03209 328 VPPKESDAADGPKPVPTK---PVTPEAPSPPIEEEPPQPKAVVPRPLSPytayedlKPPTSPIPTPPSSSPASSKSVDAv 404
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 400 --PKEPEPTTPKEPEPTTP-KEPEPTTPKEPEPTTP--KEPEPTTPKEPEPTTPKEPEPTTLKepEPTTPKEPEPTTPKE 474
Cdd:PLN03209 405 akPAEPDVVPSPGSASNVPeVEPAQVEAKKTRPLSPyaRYEDLKPPTSPSPTAPTGVSPSVSS--TSSVPAVPDTAPATA 482
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 475 PEPTTLKEPEPTTPKEPEPTTLKEPEPTTpkePEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP-- 552
Cdd:PLN03209 483 ATDAAAPPPANMRPLSPYAVYDDLKPPTS---PSPAAPVGKVAPSSTNEVVKVGNSAPPTALADEQHHAQPKPRPLSPyt 559
|
250
....*....|....*..
gi 1907070847 553 KEPEPTTPKEPEPTTPK 569
Cdd:PLN03209 560 MYEDLKPPTSPTPSPVL 576
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
323-498 |
3.17e-08 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 57.67 E-value: 3.17e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 323 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTlkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 402
Cdd:PRK14948 366 SEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAAT--TPSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLNLEE 443
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 403 ---------PEPTT------------------------------------------------------PKEPEPTTPKEP 419
Cdd:PRK14948 444 lwqqilaklELPSTrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnleSQSGSASNTAKT 523
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070847 420 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKE 498
Cdd:PRK14948 524 PPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTA---TQASSNAPAQIPADSSPPPPIPEEPTPSPTKDSSPEEIDK 599
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
432-610 |
3.22e-08 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 57.57 E-value: 3.22e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 432 PKEPEPTTPKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTT 511
Cdd:PRK07994 361 PAAPLPEPEVPPQSAAPAASAQAT---AAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATK 437
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 512 TKEPESTTRKEPEPtTPKEPEPTTPKEPEPTTPKEPepttPKEPEPTTPKEPEPTTPKEPEPTTPKEPepttpkKPEPTT 591
Cdd:PRK07994 438 AKKSEPAAASRARP-VNSALERLASVRPAPSALEKA----PAKKEAYRWKATNPVEVKKEPVATPKAL------KKALEH 506
|
170
....*....|....*....
gi 1907070847 592 PKEPEPTTPKEPEPTTPKE 610
Cdd:PRK07994 507 EKTPELAAKLAAEAIERDP 525
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
344-631 |
3.43e-08 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 58.03 E-value: 3.43e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 344 PKEPEPTTPKEPEPTTLK-EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP---KEPEPTTPKEPEPTTPKEP 419
Cdd:PHA03247 206 PSGPGPAAPADLTAAALHlYGASETYLQDEPFVERRVVISHPLRGDIAAPAPPPVVGEgadRAPETARGATGPPPPPEAA 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 420 EPTTPKEPEP---------TTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKePEPTTPKEPEPTTLKEPEPTTPKE 490
Cdd:PHA03247 286 APNGAAAPPDgvwgaalagAPLALPAPPDPPPPAPAGDAEEEDDEDGAMEVVSPL-PRPRQHYPLGFPKRRRPTWTPPSS 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 491 PEPTTLKEPEPttPKEPEPTTTKEpesTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPepttpkEPEPTTPKE 570
Cdd:PHA03247 365 LEDLSAGRHHP--KRASLPTRKRR---SARHAATPFARGPGGDDQTRPAAPVPASVPTPAPTPVP------ASAPPPPAT 433
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907070847 571 PEPTtpkePEPTTPKKPEPTtpkePEPTTPKEPEPTTPKEPEPTTPKEPEP-TTRKEPEPTT 631
Cdd:PHA03247 434 PLPS----AEPGSDDGPAPP----PERQPPAPATEPAPDDPDDATRKALDAlRERRPPEPPG 487
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
371-459 |
3.54e-08 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 57.98 E-value: 3.54e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 371 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEpttPKE 450
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAA---AVE 114
|
....*....
gi 1907070847 451 PEPTTLKEP 459
Cdd:PRK12270 115 DEVTPLRGA 123
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
421-616 |
3.59e-08 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 57.58 E-value: 3.59e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 421 PTTPKEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTtlKEPE 500
Cdd:PRK12323 375 ATAAAAPVAQPAPAAAAPAAAAPAPAAP-PAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGA--PAPA 451
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 501 PTTPKEPEPTT---TKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP--TTPKEPEPTTPKEPEPTT 575
Cdd:PRK12323 452 PAPAAAPAAAArpaAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPaqPDAAPAGWVAESIPDPAT 531
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 1907070847 576 PKEPEPTTPKKPEPTTPKEPEPTTPKEPE--PTTPKEPEPTTP 616
Cdd:PRK12323 532 ADPDDAFETLAPAPAAAPAPRAAAATEPVvaPRPPRASASGLP 574
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
357-568 |
3.66e-08 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 57.58 E-value: 3.66e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 357 PTTLKEPEPTTPKEPEPTTPKEPEPTTPkepEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 436
Cdd:PRK12323 375 ATAAAAPVAQPAPAAAAPAAAAPAPAAP---PAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPA 451
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 437 PTTPKEPEPTTPKEPEPttlkePEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPE 516
Cdd:PRK12323 452 PAPAAAPAAAARPAAAG-----PRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESI 526
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1907070847 517 STTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkepePTTPKEPEPTTP 568
Cdd:PRK12323 527 PDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVA----PRPPRASASGLP 574
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
400-570 |
3.76e-08 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 57.57 E-value: 3.76e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 400 PKEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPttlkEPEPTTPKEPEPTTP--KEPEP 477
Cdd:PRK07994 361 PAAPLPEPEVPPQSAAPAASAQATA-APTAAVAPPQAPAVPPPPASAPQQAPAV----PLPETTSQLLAARQQlqRAQGA 435
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 478 TTLKEPEPTTPKEPEPTTlKEPEPTTPKEPEPTTTkePESTTRKEPEPTTPKEPEPTtpKEPEPTTPKEPEP--TTPKEP 555
Cdd:PRK07994 436 TKAKKSEPAAASRARPVN-SALERLASVRPAPSAL--EKAPAKKEAYRWKATNPVEV--KKEPVATPKALKKalEHEKTP 510
|
170
....*....|....*
gi 1907070847 556 EPTTPKEPEPTTPKE 570
Cdd:PRK07994 511 ELAAKLAAEAIERDP 525
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
539-618 |
4.12e-08 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 57.59 E-value: 4.12e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 539 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 618
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
548-629 |
4.24e-08 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 57.50 E-value: 4.24e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 548 EPTTPKEPEPTTPKEPEPTTPKepepttPKEPEPTTPKKPEPTTPKEPEPtTPKEPEPTTPKEPEPTTP----KEPEPTT 623
Cdd:PRK15313 559 EPDEPIIPDPVDPVIPDPVIPD------PVDPDPVDPVIPDPVIPDPVDP-DPVDPEPVDPVIPDPTIPdigqSDTPPIT 631
|
....*.
gi 1907070847 624 RKEPEP 629
Cdd:PRK15313 632 EHQFRP 637
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
564-648 |
4.35e-08 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 57.50 E-value: 4.35e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 564 EPTTPKEPEPTTPKEPEPTTPKkpepttPKEPEPTTPKEPEPTTPKepepttPKEPEPTtrkEPEPTTPKEPEPTTPKEP 643
Cdd:PRK15313 559 EPDEPIIPDPVDPVIPDPVIPD------PVDPDPVDPVIPDPVIPD------PVDPDPV---DPEPVDPVIPDPTIPDIG 623
|
....*
gi 1907070847 644 EPTTP 648
Cdd:PRK15313 624 QSDTP 628
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
531-610 |
4.68e-08 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 57.59 E-value: 4.68e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 531 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKE 610
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
|
| MSCRAMM_ClfB |
NF033845 |
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial ... |
344-617 |
4.96e-08 |
|
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 411414 [Multi-domain] Cd Length: 871 Bit Score: 57.26 E-value: 4.96e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 344 PKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPttpkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 423
Cdd:NF033845 543 PKDPTPGPPVDPEPSPEPEPEPTPDPEPSPDPDPEPSP----DPDPDSDSDSDSGSDSDSGSDSDSDSDSDSDSDSDSDS 618
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 424 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTT 503
Cdd:NF033845 619 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 698
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 504 PKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 583
Cdd:NF033845 699 SDSSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 778
|
250 260 270
....*....|....*....|....*....|....*.
gi 1907070847 584 PKKPEPTTPKEPEPTTPKEPEPTTP--KEPEPTTPK 617
Cdd:NF033845 779 DSDSDSDSDSDSDSDSDSDSRVTPPnnEQKAPSNPK 814
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
499-645 |
5.03e-08 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 57.18 E-value: 5.03e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 499 PEPTTPKEP-EPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP--KEPEPTTPKEPEPTT 575
Cdd:PRK07994 366 PEPEVPPQSaAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQlqRAQGATKAKKSEPAA 445
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 576 PKEPEPtTPKKPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPTtrKEPEPTTPKEPEPTTPKEPEP 645
Cdd:PRK07994 446 ASRARP-VNSALERLASVRPAPSAL--EKAPAKKEAYRWKATNPVEV--KKEPVATPKALKKALEHEKTP 510
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
332-421 |
5.24e-08 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 57.12 E-value: 5.24e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 332 EPTTPKEPEPTTPKEPEPTTPkepEPTtlkEPEPTTPKEPEPTTPKEPEPtTPKEPEPTTPKEPEPTTPKEPEPTTPkep 411
Cdd:PRK15313 559 EPDEPIIPDPVDPVIPDPVIP---DPV---DPDPVDPVIPDPVIPDPVDP-DPVDPEPVDPVIPDPTIPDIGQSDTP--- 628
|
90
....*....|
gi 1907070847 412 ePTTPKEPEP 421
Cdd:PRK15313 629 -PITEHQFRP 637
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
340-429 |
5.24e-08 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 57.12 E-value: 5.24e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 340 EPTTPKEPEPTTPKEPEPTTlkePEPTtpkEPEPTTPKEPEPTTPKEPEPtTPKEPEPTTPKEPEPTTPKEPEPTTPkep 419
Cdd:PRK15313 559 EPDEPIIPDPVDPVIPDPVI---PDPV---DPDPVDPVIPDPVIPDPVDP-DPVDPEPVDPVIPDPTIPDIGQSDTP--- 628
|
90
....*....|
gi 1907070847 420 ePTTPKEPEP 429
Cdd:PRK15313 629 -PITEHQFRP 637
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
319-515 |
5.29e-08 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 57.36 E-value: 5.29e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 319 TRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTlkEPEPTTPKEPEPTTpkEPEPTTPKEPEPTTPKEPEPT 398
Cdd:PRK10811 848 VRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVV--EAVAEVVEEPVVVA--EPQPEEVVVVETTHPEVIAAP 923
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 399 TPKEPEPTTpkepEPTTPKEPEptTPKEPEPTTPKEPEPTTPKEPEPTTPKEP-EPTTLKEPEPTTPKEPEPTTPKEPep 477
Cdd:PRK10811 924 VTEQPQVIT----ESDVAVAQE--VAEHAEPVVEPQDETADIEEAAETAEVVVaEPEVVAQPAAPVVAEVAAEVETVT-- 995
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 1907070847 478 ttlKEPEPTTPKEPEPTTLKEPEPTTP--KEPEPTTTKEP 515
Cdd:PRK10811 996 ---AVEPEVAPAQVPEATVEHNHATAPmtRAPAPEYVPEA 1032
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
416-573 |
5.52e-08 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 56.80 E-value: 5.52e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 416 PKEPEPTTPKEPEPTTPKEPEPTTPkepEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTT 495
Cdd:PRK07994 361 PAAPLPEPEVPPQSAAPAASAQATA---APTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATK 437
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907070847 496 LKEPEPTTPKEPEPTTTkEPESTTRKEPEPTTPKEPepttPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 573
Cdd:PRK07994 438 AKKSEPAAASRARPVNS-ALERLASVRPAPSALEKA----PAKKEAYRWKATNPVEVKKEPVATPKALKKALEHEKTP 510
|
|
| MSCRAMM_ClfB |
NF033845 |
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial ... |
368-641 |
5.63e-08 |
|
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 411414 [Multi-domain] Cd Length: 871 Bit Score: 57.26 E-value: 5.63e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 368 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPttpkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 447
Cdd:NF033845 543 PKDPTPGPPVDPEPSPEPEPEPTPDPEPSPDPDPEPSP----DPDPDSDSDSDSGSDSDSGSDSDSDSDSDSDSDSDSDS 618
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 448 PKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTT 527
Cdd:NF033845 619 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 698
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 528 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTT 607
Cdd:NF033845 699 SDSSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 778
|
250 260 270
....*....|....*....|....*....|....*.
gi 1907070847 608 PKEPEPTTPKEPEPTTRKEPEPTTP--KEPEPTTPK 641
Cdd:NF033845 779 DSDSDSDSDSDSDSDSDSDSRVTPPnnEQKAPSNPK 814
|
|
| MSCRAMM_ClfB |
NF033845 |
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial ... |
336-609 |
6.13e-08 |
|
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 411414 [Multi-domain] Cd Length: 871 Bit Score: 56.88 E-value: 6.13e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 336 PKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPttpkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 415
Cdd:NF033845 543 PKDPTPGPPVDPEPSPEPEPEPTPDPEPSPDPDPEPSP----DPDPDSDSDSDSGSDSDSGSDSDSDSDSDSDSDSDSDS 618
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 416 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTT 495
Cdd:NF033845 619 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 698
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 496 LKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 575
Cdd:NF033845 699 SDSSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 778
|
250 260 270
....*....|....*....|....*....|....*.
gi 1907070847 576 PKEPEPTTPKKPEPTTPKEPEPTTP--KEPEPTTPK 609
Cdd:NF033845 779 DSDSDSDSDSDSDSDSDSDSRVTPPnnEQKAPSNPK 814
|
|
| PRK08691 |
PRK08691 |
DNA polymerase III subunits gamma and tau; Validated |
476-695 |
6.76e-08 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 56.64 E-value: 6.76e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 476 EPTTLKEPEPTTPKEPepTTLKEPEPTtpkePEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 555
Cdd:PRK08691 373 ENTELQSPSAQTAEKE--TAAKKPQPR----PEAETAQTPVQTASAAAMPSEGKTAGPVSNQENNDVPPWEDAPDEAQTA 446
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 556 EPTTPKePEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEpepttpkEPEPTTRKEPEPTTPKEP 635
Cdd:PRK08691 447 AGTAQT-SAKSIQTASEAETPPENQVSKNKAADNETDAPLSEVPSENPIQATPND-------EAVETETFAHEAPAEPFY 518
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 636 EPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTPASEDSDD 695
Cdd:PRK08691 519 GYGFPDNDCPPEDGAEIPPPDWEHAAPADTAGGGADEEAEAGGIGGNNTPSAPPPEFSTE 578
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
504-646 |
6.78e-08 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 56.80 E-value: 6.78e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 504 PKEPEPTTTKEPESTTrkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 583
Cdd:PRK07994 361 PAAPLPEPEVPPQSAA---PAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATK 437
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070847 584 PKKPEPTTPKEPEPtTPKEPEPTTPKEPEPTT----PKEPEPTTRKEPEPTTPKEPEPTTPKEPEPT 646
Cdd:PRK07994 438 AKKSEPAAASRARP-VNSALERLASVRPAPSAlekaPAKKEAYRWKATNPVEVKKEPVATPKALKKA 503
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
363-549 |
7.73e-08 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 56.51 E-value: 7.73e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 363 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 442
Cdd:PRK14948 366 SEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATT--PSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLNLEE 443
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 443 ---------PEPTTPK-----------EPEPTTL------------KEPEPTTP---------------KEPEPTTPKEP 475
Cdd:PRK14948 444 lwqqilaklELPSTRMllsqqaelvslDSNRAVIavspnwlgmvqsRKPLLEQAfakvlgrsiklnlesQSGSASNTAKT 523
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907070847 476 EPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKePEPTTPKEPEP 549
Cdd:PRK14948 524 PPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPT-PSPTKDSSPEE 596
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
323-453 |
9.30e-08 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 56.03 E-value: 9.30e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 323 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPtTPKEPEPTTPKE 402
Cdd:PRK07994 385 AAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKKSEPAAASRARP-VNSALERLASVR 463
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 1907070847 403 PEPTTPKEPepttPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 453
Cdd:PRK07994 464 PAPSALEKA----PAKKEAYRWKATNPVEVKKEPVATPKALKKALEHEKTP 510
|
|
| MSCRAMM_ClfB |
NF033845 |
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial ... |
376-649 |
9.71e-08 |
|
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 411414 [Multi-domain] Cd Length: 871 Bit Score: 56.49 E-value: 9.71e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 376 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPttpkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 455
Cdd:NF033845 543 PKDPTPGPPVDPEPSPEPEPEPTPDPEPSPDPDPEPSP----DPDPDSDSDSDSGSDSDSGSDSDSDSDSDSDSDSDSDS 618
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 456 LKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTT 535
Cdd:NF033845 619 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 698
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 536 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 615
Cdd:NF033845 699 SDSSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 778
|
250 260 270
....*....|....*....|....*....|....*.
gi 1907070847 616 PKEPEPTTRKEPEPTTPKEPEPTTP--KEPEPTTPK 649
Cdd:NF033845 779 DSDSDSDSDSDSDSDSDSDSRVTPPnnEQKAPSNPK 814
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
324-405 |
1.03e-07 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 56.35 E-value: 1.03e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 324 EPTTPKEPEPTTPKEPEPTTPK--EPEPTTPKEPEPtTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkepePTTPK 401
Cdd:PRK15313 559 EPDEPIIPDPVDPVIPDPVIPDpvDPDPVDPVIPDP-VIPDPVDPDPVDPEPVDPVIPDPTIPDIGQSDTP----PITEH 633
|
....
gi 1907070847 402 EPEP 405
Cdd:PRK15313 634 QFRP 637
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
392-562 |
1.06e-07 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 56.03 E-value: 1.06e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 392 PKEPEPTTPKEPEPTTPKEPEPTTPkepEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTT 471
Cdd:PRK07994 361 PAAPLPEPEVPPQSAAPAASAQATA---APTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATK 437
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 472 PKEPEPTTLKEPEPtTPKEPEPTTLKEPEPTTPkEPEPtttKEPESTTRKEPEPTTPKEPEPTTPKEPEP--TTPKEPEP 549
Cdd:PRK07994 438 AKKSEPAAASRARP-VNSALERLASVRPAPSAL-EKAP---AKKEAYRWKATNPVEVKKEPVATPKALKKalEHEKTPEL 512
|
170
....*....|...
gi 1907070847 550 TTPKEPEPTTPKE 562
Cdd:PRK07994 513 AAKLAAEAIERDP 525
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
381-555 |
1.06e-07 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 56.20 E-value: 1.06e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 381 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpkEPEPTTPKEPEPTTPKEPEPTTPKE-PEPTTLKEP 459
Cdd:PRK10811 846 PVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVV--EAVAEVVEEPVVVAEPQPEEVVVVEtTHPEVIAAP 923
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 460 EPTTPKEPEPTTPKEPEPTTlKEPEPTTPKEPEPTTLKEPEPTtpkepEPTTTKEPESTTrkepEPTTPKEPEPTTPKEP 539
Cdd:PRK10811 924 VTEQPQVITESDVAVAQEVA-EHAEPVVEPQDETADIEEAAET-----AEVVVAEPEVVA----QPAAPVVAEVAAEVET 993
|
170
....*....|....*.
gi 1907070847 540 EPTTPKEPEPTTPKEP 555
Cdd:PRK10811 994 VTAVEPEVAPAQVPEA 1009
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
523-602 |
1.09e-07 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 56.44 E-value: 1.09e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 523 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKE 602
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
472-648 |
1.27e-07 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 55.64 E-value: 1.27e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 472 PKEPEPTTLKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 551
Cdd:PRK07994 361 PAAPLPEPEVPPQSAAPAASAQAT---AAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATK 437
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 552 PKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKKPepttPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEpeptt 631
Cdd:PRK07994 438 AKKSEPAAASRARPV-NSALERLASVRPAPSALEKA----PAKKEAYRWKATNPVEVKKEPVATPKALKKALEHE----- 507
|
170
....*....|....*..
gi 1907070847 632 pKEPEPTTPKEPEPTTP 648
Cdd:PRK07994 508 -KTPELAAKLAAEAIER 523
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
413-603 |
1.32e-07 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 55.82 E-value: 1.32e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 413 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTlkEPEPTTPKEPEPTTPKEPepttlkePEPTTPKEPE 492
Cdd:PRK10811 846 PVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVV--EAVAEVVEEPVVVAEPQP-------EEVVVVETTH 916
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 493 PTTLKEPEPTTPKEPEPTTTKEPESTTRkEPEPTTPKEPEPTTPKEPEPTT---PKEPEP-TTPKEPEPTTPKEPEPTTP 568
Cdd:PRK10811 917 PEVIAAPVTEQPQVITESDVAVAQEVAE-HAEPVVEPQDETADIEEAAETAevvVAEPEVvAQPAAPVVAEVAAEVETVT 995
|
170 180 190
....*....|....*....|....*....|....*..
gi 1907070847 569 KEPEPTTPKEPEPTTPKKPEPTTP--KEPEPTTPKEP 603
Cdd:PRK10811 996 AVEPEVAPAQVPEATVEHNHATAPmtRAPAPEYVPEA 1032
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
547-622 |
1.33e-07 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 56.05 E-value: 1.33e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070847 547 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPT 622
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAV 113
|
|
| PRK08691 |
PRK08691 |
DNA polymerase III subunits gamma and tau; Validated |
420-637 |
1.33e-07 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 55.87 E-value: 1.33e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 420 EPTTPKEPEPTTPKEPepTTPKEPEPTtpkePEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEP 499
Cdd:PRK08691 373 ENTELQSPSAQTAEKE--TAAKKPQPR----PEAETAQTPVQTASAAAMPSEGKTAGPVSNQENNDVPPWEDAPDEAQTA 446
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 500 EPTTPKepeptttkePESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKE 578
Cdd:PRK08691 447 AGTAQT---------SAKSIQTASEAETPPENQVSKNKAADNETDAPLSEVPSENPIQATPnDEAVETETFAHEAPAEPF 517
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 579 PEPTTPKKPEPttPKEPEPTTPKEPEPTTPKEP-EPTTPKEPEPTTRKEPEptTPKEPEP 637
Cdd:PRK08691 518 YGYGFPDNDCP--PEDGAEIPPPDWEHAAPADTaGGGADEEAEAGGIGGNN--TPSAPPP 573
|
|
| MSCRAMM_ClfB |
NF033845 |
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial ... |
321-593 |
1.36e-07 |
|
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 411414 [Multi-domain] Cd Length: 871 Bit Score: 55.72 E-value: 1.36e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 321 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPttlkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 400
Cdd:NF033845 544 KDPTPGPPVDPEPSPEPEPEPTPDPEPSPDPDPEPSP----DPDPDSDSDSDSGSDSDSGSDSDSDSDSDSDSDSDSDSD 619
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 401 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTL 480
Cdd:NF033845 620 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 699
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 481 KEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 560
Cdd:NF033845 700 DSSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 779
|
250 260 270
....*....|....*....|....*....|....*
gi 1907070847 561 KEPEPTTPKEPEPTTPKEPEPTTPKKPE--PTTPK 593
Cdd:NF033845 780 SDSDSDSDSDSDSDSDSDSRVTPPNNEQkaPSNPK 814
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
363-442 |
1.48e-07 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 55.67 E-value: 1.48e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 363 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 442
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
381-592 |
1.51e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 55.65 E-value: 1.51e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 381 PTTPKEPEPTTPKEPEPTTPKEPEPTTPkepEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPE 460
Cdd:PRK12323 375 ATAAAAPVAQPAPAAAAPAAAAPAPAAP---PAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPA 451
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 461 PTTPKEPEPTTP---KEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPEsttrkePEPTTPKEPEPTTPK 537
Cdd:PRK12323 452 PAPAAAPAAAARpaaAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPA------PAQPDAAPAGWVAES 525
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 1907070847 538 EPEPTTPKEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPkepePTTPKKPEPTTP 592
Cdd:PRK12323 526 IPDPATADPDDAFETLAPAPAAA--PAPRAAAATEPVVA----PRPPRASASGLP 574
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
437-640 |
1.52e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 55.65 E-value: 1.52e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 437 PTTPKEPEPTTPKEPEPTTLKEPEPTTPkepEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPE 516
Cdd:PRK12323 375 ATAAAAPVAQPAPAAAAPAAAAPAPAAP---PAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPA 451
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 517 STTRKEPEPTTP---KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP--TTPKEPEPTTPKKPEPTT 591
Cdd:PRK12323 452 PAPAAAPAAAARpaaAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPaqPDAAPAGWVAESIPDPAT 531
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1907070847 592 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTtrkepePTTPKEPEPTTP 640
Cdd:PRK12323 532 ADPDDAFETLAPAPAAAPAPRAAAATEPVVA------PRPPRASASGLP 574
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
320-495 |
1.53e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 55.65 E-value: 1.53e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 320 RKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP---KEPE 396
Cdd:PRK12323 391 APAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAAAPAAAARpaaAGPR 470
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 397 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP--TTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKE 474
Cdd:PRK12323 471 PVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPaqPDAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPA 550
|
170 180
....*....|....*....|...
gi 1907070847 475 PEPTTLKEPE--PTTPKEPEPTT 495
Cdd:PRK12323 551 PRAAAATEPVvaPRPPRASASGL 573
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
344-517 |
1.60e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 55.35 E-value: 1.60e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 344 PKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 423
Cdd:PRK14948 363 AFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATT--PSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLN 440
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 424 PKE---------PEPTT------------------------------------------------------PKEPEPTTP 440
Cdd:PRK14948 441 LEElwqqilaklELPSTrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnleSQSGSASNT 520
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070847 441 KEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTlKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPES 517
Cdd:PRK14948 521 AKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTA-TQASSNAPAQIPADSSPPPPIPEEPTPSPTKDSSPEE 596
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
322-581 |
1.76e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 55.63 E-value: 1.76e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 322 EPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 401
Cdd:PRK07003 359 EPAVTGGGAPGGGVPARVAGAVPA-PGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATAD 437
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 402 EPEPTTPKePEPTTPKEPEPTTPKEPEPttPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPttlk 481
Cdd:PRK07003 438 RGDDAADG-DAPVPAKANARASADSRCD--ERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDA---- 510
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 482 EPEPTTPKEPEPTTLKEPEPTTPkEPEPTTTKEPE-------------------STTRKEPEPTTPKePEPTTPKEPEPT 542
Cdd:PRK07003 511 RAPAAASREDAPAAAAPPAPEAR-PPTPAAAAPAAraggaaaaldvlrnagmrvSSDRGARAAAAAK-PAAAPAAAPKPA 588
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 1907070847 543 TPKEPEPT-TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 581
Cdd:PRK07003 589 APRVAVQVpTPRARAATGDAPPNGAARAEQAAESRGAPPP 628
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
348-437 |
1.80e-07 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 55.58 E-value: 1.80e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 348 EPTTPKEPEPTTLKEPEPTTPKepepttPKEPEPTTPKEPEPTTPKEPEPtTPKEPEPTTPKEPEPTTPKEPEPTTPkep 427
Cdd:PRK15313 559 EPDEPIIPDPVDPVIPDPVIPD------PVDPDPVDPVIPDPVIPDPVDP-DPVDPEPVDPVIPDPTIPDIGQSDTP--- 628
|
90
....*....|
gi 1907070847 428 ePTTPKEPEP 437
Cdd:PRK15313 629 -PITEHQFRP 637
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
388-477 |
1.80e-07 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 55.58 E-value: 1.80e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 388 EPTTPKEPEPTTPKEPEPTTPKepepttPKEPEPTTPKEPEPTTPKEPEPtTPKEPEPTTPKEPEPTTLKEPEPTTPkep 467
Cdd:PRK15313 559 EPDEPIIPDPVDPVIPDPVIPD------PVDPDPVDPVIPDPVIPDPVDP-DPVDPEPVDPVIPDPTIPDIGQSDTP--- 628
|
90
....*....|
gi 1907070847 468 ePTTPKEPEP 477
Cdd:PRK15313 629 -PITEHQFRP 637
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
408-578 |
2.06e-07 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 54.87 E-value: 2.06e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 408 PKEPEPTTPKEPEPTTPKEPEPTTPkepEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTT 487
Cdd:PRK07994 361 PAAPLPEPEVPPQSAAPAASAQATA---APTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATK 437
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 488 PKEPEPTTLKEPEPtTPKEPEPTTTKEPESTTRKEPepttPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP--TTPKEPEP 565
Cdd:PRK07994 438 AKKSEPAAASRARP-VNSALERLASVRPAPSALEKA----PAKKEAYRWKATNPVEVKKEPVATPKALKKalEHEKTPEL 512
|
170
....*....|...
gi 1907070847 566 TTPKEPEPTTPKE 578
Cdd:PRK07994 513 AAKLAAEAIERDP 525
|
|
| Aim21 |
pfam11489 |
Altered inheritance of mitochondria protein 21; This is a family of proteins conserved in ... |
336-617 |
2.34e-07 |
|
Altered inheritance of mitochondria protein 21; This is a family of proteins conserved in yeasts. Saccharomyces cerevisiae Aim21 may be involved in mitochondrial migration along actin filament. It may also interact with ribosomes.
Pssm-ID: 371558 [Multi-domain] Cd Length: 677 Bit Score: 54.98 E-value: 2.34e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 336 PKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTpKEPEPTTPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPT 414
Cdd:pfam11489 288 PSSPAPQSSSASPSGESGEEERDWYEEPILAS-DEVAKEPAGEEPAVSPSFEREEIVKyEVKSRTESVPESREESKIASI 366
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 415 TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLkEPEPTTPKEPEPT 494
Cdd:pfam11489 367 HGSVPSLARHTPLEDVEEYEPLFPEDDSEGAVKKPTEESSRFKRPELNHRFPSEDVWEDSPSSLQL-TATVSTPSNPPPR 445
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 495 TLKEPEPTTPKEPEPTTTKePESTTRKEPEPTTPKEPEPTTPKEP-------------EPTTPKEPEPTTPKEPEpttpK 561
Cdd:pfam11489 446 AFETPEQETSSSSSEPSLD-DQSELKSEDVKERPEVKAQRFPSRDvwedapesqelvtTVETPDEVKSTSPGVPT----K 520
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070847 562 EPEPTTPKEPEPTTPKEPE--PTTPKKPEPTTPKEPE-PTTPKEPEPTTPKEPEPTTPK 617
Cdd:pfam11489 521 PAIPARPKSGKPTSPTEKRkpPPVPKKPKPQIPARPAkAQPQQAGEEFKPKPRVPARPG 579
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
461-616 |
3.09e-07 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 54.66 E-value: 3.09e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 461 PTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEP----EPTTTKEPESTTRKEPEPTTPKEPEPTTP 536
Cdd:PRK10811 846 PVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAevveEPVVVAEPQPEEVVVVETTHPEVIAAPVT 925
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 537 KEPEPTTPKEP--EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP-EPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEP 613
Cdd:PRK10811 926 EQPQVITESDVavAQEVAEHAEPVVEPQDETADIEEAAETAEVVVaEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQ 1005
|
...
gi 1907070847 614 TTP 616
Cdd:PRK10811 1006 VPE 1008
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
333-552 |
3.45e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 54.50 E-value: 3.45e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 333 PTTPKEPEPTTPKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 412
Cdd:PRK12323 375 ATAAAAPVAQPAPAAAAPAAAAPAPAA---PPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPA 451
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 413 PTTPKEPEPTTPKEPEPttpkePEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPttlkepEPTTPKEPE 492
Cdd:PRK12323 452 PAPAAAPAAAARPAAAG-----PRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAP------AQPDAAPAG 520
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 493 PTTLKEPEPTTPKEPEPTTTKEPESTTrkEPEPTTPKEPEPTTPkepePTTPKEPEPTTP 552
Cdd:PRK12323 521 WVAESIPDPATADPDDAFETLAPAPAA--APAPRAAAATEPVVA----PRPPRASASGLP 574
|
|
| NESP55 |
pfam06390 |
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian ... |
403-573 |
3.50e-07 |
|
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian neuroendocrine-specific golgi protein P55 (NESP55) sequences. NESP55 is a novel member of the chromogranin family and is a soluble, acidic, heat-stable secretory protein that is expressed exclusively in endocrine and nervous tissues, although less widely than chromogranins.
Pssm-ID: 115071 [Multi-domain] Cd Length: 261 Bit Score: 52.95 E-value: 3.50e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 403 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLK 481
Cdd:pfam06390 81 PEPSEPESDHEDEDFEPELARPECLEYDEDDfDTETDSETEPESDIESETEFETEPETEPDTAPTTEPETEPEDEPGPVV 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 482 EPEPTTPKE--PEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKEPEPT 558
Cdd:pfam06390 161 PKGATFHQSltERLHALKLQSADASPRRAPPSTQEPESAREGEEPERGPLDKDPRDPEEeEEEKEEEKQQPHRCKPKKPA 240
|
170
....*....|....*
gi 1907070847 559 TPKEPEPTTPKEPEP 573
Cdd:pfam06390 241 RRRDPSPESPPKKGA 255
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
549-644 |
3.59e-07 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 54.05 E-value: 3.59e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 549 PTTPKEPEPTTPKEPEPTTPKepepTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKE-P 627
Cdd:PRK14950 362 PVPAPQPAKPTAAAPSPVRPT----PAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAPKLTRAAiP 437
|
90
....*....|....*..
gi 1907070847 628 EPTTPKEPEPTTPKEPE 644
Cdd:PRK14950 438 VDEKPKYTPPAPPKEEE 454
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
507-585 |
3.60e-07 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 54.51 E-value: 3.60e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070847 507 PEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 585
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDE 116
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
326-647 |
3.64e-07 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 436069 [Multi-domain] Cd Length: 480 Bit Score: 54.15 E-value: 3.64e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 326 TTPKEPEPTTPKEPEPTTPKEPE--PTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpKEP 403
Cdd:pfam17823 86 HTPHGTDLSEPATREGAADGAASraLAAAASSSPSSAAQSAPTTIAGLPSLASSAPMAAAPRTNAASNAPTAAASS-TAA 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 404 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEP 483
Cdd:pfam17823 165 ASGAPTTAASSAPATLTPASGISTAATATGHPAAGTALAAVGNSSPAAGTVTAAVGTVTPAALATLAAAAGTVASAAGTI 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 484 EPTTPKEPEPTTLKE-PEPTTPKEPEPTTTKEPESTTRKepepTTPKEPEPTTPKEPEPT-TPKEPEPTTPKEPEPTTPK 561
Cdd:pfam17823 245 NTGDPHARRLSPAKHmPSDTSARNPAAPSGAQAQGLIIQ----VSTDQPVHNTAGEPTPSpSNTTLEPNTPKSVASTNLA 320
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 562 EPEPTTPKEPEPTTPKEPEPTTPKKPE-----PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPE 636
Cdd:pfam17823 321 VVTTTKAQAKEPSASPVPVLHTSMIPEveatsPTTQPSPLLPTQGAAGPGILLAPDQVATDATAGTASAGPTPRSSGDPK 400
|
330
....*....|.
gi 1907070847 637 PTTPKEPEPTT 647
Cdd:pfam17823 401 MLAMASCQLST 411
|
|
| PRK08691 |
PRK08691 |
DNA polymerase III subunits gamma and tau; Validated |
364-573 |
3.88e-07 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 54.33 E-value: 3.88e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 364 EPTTPKEPEPTTPKEPepTTPKEPEPTtpkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 443
Cdd:PRK08691 373 ENTELQSPSAQTAEKE--TAAKKPQPR----PEAETAQTPVQTASAAAMPSEGKTAGPVSNQENNDVPPWEDAPDEAQTA 446
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 444 EPTTPKePEPTTLKEPEPTTPKEPEPTTPKEPEpttlKEPEPTTPKEPEPTtlkePEPTTP-KEPEPTTTKEPESTTRKE 522
Cdd:PRK08691 447 AGTAQT-SAKSIQTASEAETPPENQVSKNKAAD----NETDAPLSEVPSEN----PIQATPnDEAVETETFAHEAPAEPF 517
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070847 523 PEPTTPKEPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKEP----EPTTPKEPEP 573
Cdd:PRK08691 518 YGYGFPDNDCPPEDGAEIPPPDWEhAAPADTAGGGADEEAEAggigGNNTPSAPPP 573
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
328-501 |
3.89e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 54.20 E-value: 3.89e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 328 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 407
Cdd:PRK14948 363 AFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATT--PSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLN 440
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 408 PKE---------PEPTT------------------------------------------------------PKEPEPTTP 424
Cdd:PRK14948 441 LEElwqqilaklELPSTrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnleSQSGSASNT 520
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070847 425 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEP 501
Cdd:PRK14948 521 AKTPPPPQKSPPPPAPTPPLPQPTATAPPPT---PPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTKDSSP 594
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
523-597 |
4.20e-07 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 54.42 E-value: 4.20e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070847 523 PEPTTPKEPEPTTPK--EPEPTTPKEPEPTTPKEPEPtTPKEPEPTTPKEPEPTTPKEPEPTTPkkpePTTPKEPEP 597
Cdd:PRK15313 566 PDPVDPVIPDPVIPDpvDPDPVDPVIPDPVIPDPVDP-DPVDPEPVDPVIPDPTIPDIGQSDTP----PITEHQFRP 637
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
355-434 |
4.41e-07 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 54.13 E-value: 4.41e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 355 PEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 434
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
365-530 |
5.74e-07 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 53.89 E-value: 5.74e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 365 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpkEPEPTTPKEPEPTTPKEPEPTTPKE-PEPTTPKEP 443
Cdd:PRK10811 846 PVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVV--EAVAEVVEEPVVVAEPQPEEVVVVEtTHPEVIAAP 923
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 444 EPTTPKEPEPTTLKEPEPTTPkEPEPTTPKEPEPTTLKEPEPTT---PKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTR 520
Cdd:PRK10811 924 VTEQPQVITESDVAVAQEVAE-HAEPVVEPQDETADIEEAAETAevvVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVA 1002
|
170
....*....|
gi 1907070847 521 KEPEPTTPKE 530
Cdd:PRK10811 1003 PAQVPEATVE 1012
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
437-627 |
5.83e-07 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 53.89 E-value: 5.83e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 437 PTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTlkEPEPTTPKEPEPTTLKEPEPTTPKEpepTTTKEPE 516
Cdd:PRK10811 846 PVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVV--EAVAEVVEEPVVVAEPQPEEVVVVE---TTHPEVI 920
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 517 STTRKEPEPTTPKEPEPT---TPKEPEPTTPKEPEPTTPKEPEPTtpkepEPTTPKEPEP-TTPKEPEPTTPKKPEPTTP 592
Cdd:PRK10811 921 AAPVTEQPQVITESDVAVaqeVAEHAEPVVEPQDETADIEEAAET-----AEVVVAEPEVvAQPAAPVVAEVAAEVETVT 995
|
170 180 190
....*....|....*....|....*....|....*..
gi 1907070847 593 KEPEPTTPKEPEPTTPKEPEPTTP--KEPEPTTRKEP 627
Cdd:PRK10811 996 AVEPEVAPAQVPEATVEHNHATAPmtRAPAPEYVPEA 1032
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
563-642 |
5.93e-07 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 53.74 E-value: 5.93e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 563 PEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKE 642
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
339-418 |
5.98e-07 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 53.74 E-value: 5.98e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 339 PEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 418
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
413-647 |
6.08e-07 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 54.17 E-value: 6.08e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 413 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPkepepttPKEPEPTTLKEPEPTTPKEPE 492
Cdd:PHA03247 255 PAPPPVVGEGADRAPETARGATGPPPPPEAAAPNGAAAPPDGVWGAALAGAP-------LALPAPPDPPPPAPAGDAEEE 327
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 493 PTTLKEPEPTTPKePEPTTTKEPESTTRKEPEPTTPKEPEPTT-----PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 567
Cdd:PHA03247 328 DDEDGAMEVVSPL-PRPRQHYPLGFPKRRRPTWTPPSSLEDLSagrhhPKRASLPTRKRRSARHAATPFARGPGGDDQTR 406
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 568 PKEPEPTTPKEPEPTTPKKPEPTTPKEPEPT-TPKEPE-PTTPKEPEPTTPkePEPTTRKEPEPTTPKEPEP-TTPKEPE 644
Cdd:PHA03247 407 PAAPVPASVPTPAPTPVPASAPPPPATPLPSaEPGSDDgPAPPPERQPPAP--ATEPAPDDPDDATRKALDAlRERRPPE 484
|
...
gi 1907070847 645 PTT 647
Cdd:PHA03247 485 PPG 487
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
571-649 |
6.09e-07 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 53.74 E-value: 6.09e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070847 571 PEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPK 649
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDE 116
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
525-620 |
6.32e-07 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 53.27 E-value: 6.32e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 525 PTTPKEPEPTTPKEPEPTTPKepepTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKE-P 603
Cdd:PRK14950 362 PVPAPQPAKPTAAAPSPVRPT----PAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAPKLTRAAiP 437
|
90
....*....|....*..
gi 1907070847 604 EPTTPKEPEPTTPKEPE 620
Cdd:PRK14950 438 VDEKPKYTPPAPPKEEE 454
|
|
| MSCRAMM_ClfB |
NF033845 |
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial ... |
440-702 |
6.35e-07 |
|
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 411414 [Multi-domain] Cd Length: 871 Bit Score: 53.79 E-value: 6.35e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 440 PKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPttlkEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTT 519
Cdd:NF033845 543 PKDPTPGPPVDPEPSPEPEPEPTPDPEPSPDPDPEPSP----DPDPDSDSDSDSGSDSDSGSDSDSDSDSDSDSDSDSDS 618
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 520 RKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTT 599
Cdd:NF033845 619 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 698
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 600 PKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEI 679
Cdd:NF033845 699 SDSSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 778
|
250 260
....*....|....*....|....
gi 1907070847 680 QNKPEETTPASEDSD-DSKTTLKP 702
Cdd:NF033845 779 DSDSDSDSDSDSDSDsDSDSRVTP 802
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
352-525 |
6.62e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 53.43 E-value: 6.62e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 352 PKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 431
Cdd:PRK14948 363 AFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATT--PSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLN 440
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 432 PKE---------PEPTT------------------------------------------------------PKEPEPTTP 448
Cdd:PRK14948 441 LEElwqqilaklELPSTrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnleSQSGSASNT 520
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070847 449 KEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEP 525
Cdd:PRK14948 521 AKTPPPPQKSPPPPAPTPPLPQPTATAPPPT---PPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTKDSSP 594
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
499-578 |
6.80e-07 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 53.74 E-value: 6.80e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 499 PEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 578
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
339-428 |
7.69e-07 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 53.27 E-value: 7.69e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 339 PEPTTPKEPEPTtPKEPEPTTLKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKE-PEPTTP 416
Cdd:PRK14950 366 PQPAKPTAAAPS-PVRPTPAPSTRPKAAAAANIPPKEPVrETATPPPVPPRPVAP--PVPHTPESAPKLTRAAiPVDEKP 442
|
90
....*....|..
gi 1907070847 417 KEPEPTTPKEPE 428
Cdd:PRK14950 443 KYTPPAPPKEEE 454
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
347-426 |
8.76e-07 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 53.36 E-value: 8.76e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 347 PEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 426
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
387-483 |
9.06e-07 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 53.36 E-value: 9.06e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 387 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTlkepepttpke 466
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAA----------- 106
|
90
....*....|....*..
gi 1907070847 467 PEPTTPKEPEPTTLKEP 483
Cdd:PRK12270 107 APAAAAVEDEVTPLRGA 123
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
483-645 |
9.32e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 53.04 E-value: 9.32e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 483 PEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTrkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE------ 556
Cdd:PRK14948 366 SEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAAT--TPSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPslnlee 443
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 557 -----------PTT------------------------------------------------------PKEPEPTTPKEP 571
Cdd:PRK14948 444 lwqqilaklelPSTrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnleSQSGSASNTAKT 523
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907070847 572 EPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKePEPTTPKEPEP 645
Cdd:PRK14948 524 PPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPT-PSPTKDSSPEE 596
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
411-512 |
9.95e-07 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 52.97 E-value: 9.95e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 411 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTlkePEPTTPKE 490
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAA---APAAAAVE 114
|
90 100
....*....|....*....|....*..
gi 1907070847 491 PEPTTLKEPEPTTPKEPE-----PTTT 512
Cdd:PRK12270 115 DEVTPLRGAAAAVAKNMDaslevPTAT 141
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
511-594 |
1.08e-06 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 52.97 E-value: 1.08e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 511 TTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPT 590
Cdd:PRK12270 34 ADYGPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAV 113
|
....
gi 1907070847 591 TPKE 594
Cdd:PRK12270 114 EDEV 117
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
485-648 |
1.12e-06 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 52.73 E-value: 1.12e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 485 PTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTpkEPEPTTPKEPEPTTpkEPEPTTPKEPEPTTPKEPE 564
Cdd:PRK10811 846 PVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVV--EAVAEVVEEPVVVA--EPQPEEVVVVETTHPEVIA 921
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 565 PTTPKEPEPTTPKEP--EPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEP-EPTTPKEPEPTTRKEPEPTTPKEPEPTTPK 641
Cdd:PRK10811 922 APVTEQPQVITESDVavAQEVAEHAEPVVEPQDETADIEEAAETAEVVVaEPEVVAQPAAPVVAEVAAEVETVTAVEPEV 1001
|
....*..
gi 1907070847 642 EPEPTTP 648
Cdd:PRK10811 1002 APAQVPE 1008
|
|
| MSCRAMM_ClfB |
NF033845 |
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial ... |
361-633 |
1.14e-06 |
|
MSCRAMM family adhesin clumping factor ClfB; Clumping factor B is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 411414 [Multi-domain] Cd Length: 871 Bit Score: 52.64 E-value: 1.14e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 361 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTtpKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 440
Cdd:NF033845 544 KDPTPGPPVDPEPSPEPEPEPTPDPEPSPD--PDPEPSPDPDPDSDSDSDSGSDSDSGSDSDSDSDSDSDSDSDSDSDSD 621
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 441 KEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTR 520
Cdd:NF033845 622 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 701
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 521 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTP 600
Cdd:NF033845 702 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 781
|
250 260 270
....*....|....*....|....*....|...
gi 1907070847 601 KEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPK 633
Cdd:NF033845 782 SDSDSDSDSDSDSDSDSRVTPPNNEQKAPSNPK 814
|
|
| PRK13108 |
PRK13108 |
prolipoprotein diacylglyceryl transferase; Reviewed |
464-626 |
1.23e-06 |
|
prolipoprotein diacylglyceryl transferase; Reviewed
Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 52.29 E-value: 1.23e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 464 PKEPEPTT-PKEPEPTTLKEPEPTTPKEP-EPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTP----K 537
Cdd:PRK13108 295 ALEREPAElAAAAVASAASAVGPVGPGEPnQPDDVAEAVKAEVAEVTDEVAAESVVQVADRDGESTPAVEETSEAdierE 374
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 538 EPEPTTPKEPE-PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKkpepTTPKEPEPTTPKEPEPtTPKEPEPTTP 616
Cdd:PRK13108 375 QPGDLAGQAPAaHQVDAEAASAAPEEPAALASEAHDETEPEVPEKAAPI----PDPAKPDELAVAGPGD-DPAEPDGIRR 449
|
170
....*....|
gi 1907070847 617 KEPEPTTRKE 626
Cdd:PRK13108 450 QDDFSSRRRR 459
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
331-410 |
1.23e-06 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 52.97 E-value: 1.23e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 331 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 410
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
555-634 |
1.24e-06 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 52.97 E-value: 1.24e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 555 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKE 634
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
|
| PRK08691 |
PRK08691 |
DNA polymerase III subunits gamma and tau; Validated |
356-565 |
1.35e-06 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 52.40 E-value: 1.35e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 356 EPTTLKEPEPTTPKEPepTTPKEPEPTTPKEPEPTTPKEPE----PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 431
Cdd:PRK08691 373 ENTELQSPSAQTAEKE--TAAKKPQPRPEAETAQTPVQTASaaamPSEGKTAGPVSNQENNDVPPWEDAPDEAQTAAGTA 450
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 432 PKePEPTTPKEPEPTTPKEPEPTTLKEPEpttpKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTT 511
Cdd:PRK08691 451 QT-SAKSIQTASEAETPPENQVSKNKAAD----NETDAPLSEVPSENPIQATPNDEAVETETFAHEAPAEPFYGYGFPDN 525
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 1907070847 512 TKEPESTTRKEPEPTTPKEPEPTTPKEPEpttpKEPEPTTPKEPEptTPKEPEP 565
Cdd:PRK08691 526 DCPPEDGAEIPPPDWEHAAPADTAGGGAD----EEAEAGGIGGNN--TPSAPPP 573
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
362-613 |
1.37e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 52.54 E-value: 1.37e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 362 EPEPT----TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 437
Cdd:PRK07003 359 EPAVTgggaPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADR 438
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 438 TTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPtttkEPES 517
Cdd:PRK07003 439 GDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDA----RAPA 514
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 518 TTRKEPEPTTPKEPEPTTPkEPEPTTPKEP------------------EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 579
Cdd:PRK07003 515 AASREDAPAAAAPPAPEAR-PPTPAAAAPAaraggaaaaldvlrnagmRVSSDRGARAAAAAKPAAAPAAAPKPAAPRVA 593
|
250 260 270
....*....|....*....|....*....|....*
gi 1907070847 580 EPT-TPKKPEPTTPKEPEPTTPKEPEPTTPKEPEP 613
Cdd:PRK07003 594 VQVpTPRARAATGDAPPNGAARAEQAAESRGAPPP 628
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
323-402 |
1.41e-06 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 52.59 E-value: 1.41e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 323 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 402
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
317-482 |
1.42e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 52.27 E-value: 1.42e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 317 STTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKE---------P 387
Cdd:PRK14948 374 PANPTPAPNPSPPPAPIQPSAPKTKQAATTPSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLNLEElwqqilaklE 453
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 388 EPTT------------------------------------------------------PKEPEPTTPKEPEPTTPKEPEP 413
Cdd:PRK14948 454 LPSTrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnleSQSGSASNTAKTPPPPQKSPPP 533
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070847 414 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTPKEPEPTTLKE 482
Cdd:PRK14948 534 PAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSS---PPPPIPEEPTPSPTKDSSPEEIDK 599
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
363-452 |
1.54e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 52.12 E-value: 1.54e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 363 PEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKE-PEPTTP 440
Cdd:PRK14950 366 PQPAKPTAAAPS-PVRPTPAPSTRPKAAAAANIPPKEPVrETATPPPVPPRPVAP--PVPHTPESAPKLTRAAiPVDEKP 442
|
90
....*....|..
gi 1907070847 441 KEPEPTTPKEPE 452
Cdd:PRK14950 443 KYTPPAPPKEEE 454
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
325-420 |
1.55e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 52.12 E-value: 1.55e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 325 PTTPKEPEPTTPKEPEPTTPKepepTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE-P 403
Cdd:PRK14950 362 PVPAPQPAKPTAAAPSPVRPT----PAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAPKLTRAAiP 437
|
90
....*....|....*..
gi 1907070847 404 EPTTPKEPEPTTPKEPE 420
Cdd:PRK14950 438 VDEKPKYTPPAPPKEEE 454
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
523-612 |
1.59e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 52.12 E-value: 1.59e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 523 PEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPkePEPTTPKKPEPTTPKE-PEPTTP 600
Cdd:PRK14950 366 PQPAKPTAAAPS-PVRPTPAPSTRPKAAAAANIPPKEPVrETATPPPVPPRPVAP--PVPHTPESAPKLTRAAiPVDEKP 442
|
90
....*....|..
gi 1907070847 601 KEPEPTTPKEPE 612
Cdd:PRK14950 443 KYTPPAPPKEEE 454
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
412-488 |
1.65e-06 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 52.49 E-value: 1.65e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070847 412 EPTTPKEPEPTTPKEPEPTTPKepepttPKEPEPTTPKEPEPtTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTP 488
Cdd:PRK15313 559 EPDEPIIPDPVDPVIPDPVIPD------PVDPDPVDPVIPDP-VIPDPVDPDPVDPEPVDPVIPDPTIPDIGQSDTP 628
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
539-646 |
1.94e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 52.02 E-value: 1.94e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 539 PEPTTPKEPEPTTP---KEPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPT 614
Cdd:PRK14951 376 AEKKTPARPEAAAPaaaPVAQAAAAPAPAAAPAAAaSAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQA 455
|
90 100 110
....*....|....*....|....*....|..
gi 1907070847 615 TPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPT 646
Cdd:PRK14951 456 APETVAIPVRVAPEPAVASAAPAPAAAPAAAR 487
|
|
| DUF4045 |
pfam13254 |
Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. ... |
469-637 |
1.95e-06 |
|
Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. This domain family is found in bacteria and eukaryotes, and is typically between 384 and 430 amino acids in length.
Pssm-ID: 433066 [Multi-domain] Cd Length: 415 Bit Score: 51.32 E-value: 1.95e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 469 PTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPEStTRKEPEPTTPKEPEPTTPKEPEPTTPKEPE 548
Cdd:pfam13254 197 PNSFKEVTPVGLMRSPAPGGHSKSPSVSGISADSSPTKEEPSEEADTLS-TDKEQSPAPTSASEPPPKTKELPKDSEEPA 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 549 PTTPKEPEPTTPKEPEptTPKEPEPTTPKEPEPTTPKKPEPTTPKepePTTPKEPEPTTPKEPEPTTPKEPEPTTRK-EP 627
Cdd:pfam13254 276 APSKSAEASTEKKEPD--TESSPETSSEKSAPSLLSPVSKASIDK---PLSSPDRDPLSPKPKPQSPPKDFRANLRSrEV 350
|
170
....*....|
gi 1907070847 628 EPTTPKEPEP 637
Cdd:pfam13254 351 PKDKSKKDEP 360
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
323-397 |
1.98e-06 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 52.11 E-value: 1.98e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070847 323 PEPTTPKEPEPTTPK--EPEPTTPKEPEPTTPKEPEPTTLkEPEPTTPKEPEPTTPKEPEPTTPkepePTTPKEPEP 397
Cdd:PRK15313 566 PDPVDPVIPDPVIPDpvDPDPVDPVIPDPVIPDPVDPDPV-DPEPVDPVIPDPTIPDIGQSDTP----PITEHQFRP 637
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
533-636 |
1.99e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 51.73 E-value: 1.99e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 533 PTTPKEPEPTTPKEPEPTTPKePEPTTpkepePTTPKEPEPTTPKEPEPTTPKKPEPTtpkePEPTTPkePEPTTPKEPE 612
Cdd:PRK14950 362 PVPAPQPAKPTAAAPSPVRPT-PAPST-----RPKAAAAANIPPKEPVRETATPPPVP----PRPVAP--PVPHTPESAP 429
|
90 100
....*....|....*....|....*
gi 1907070847 613 PTTPKE-PEPTTRKEPEPTTPKEPE 636
Cdd:PRK14950 430 KLTRAAiPVDEKPKYTPPAPPKEEE 454
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
381-476 |
2.06e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 51.73 E-value: 2.06e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 381 PTTPKEPEPTTPKEPEPTTPKepepTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKE-P 459
Cdd:PRK14950 362 PVPAPQPAKPTAAAPSPVRPT----PAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAPKLTRAAiP 437
|
90
....*....|....*..
gi 1907070847 460 EPTTPKEPEPTTPKEPE 476
Cdd:PRK14950 438 VDEKPKYTPPAPPKEEE 454
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
349-444 |
2.09e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 51.73 E-value: 2.09e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 349 PTTPKEPEPTTLKEPEPTTPKepepTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE-P 427
Cdd:PRK14950 362 PVPAPQPAKPTAAAPSPVRPT----PAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAPKLTRAAiP 437
|
90
....*....|....*..
gi 1907070847 428 EPTTPKEPEPTTPKEPE 444
Cdd:PRK14950 438 VDEKPKYTPPAPPKEEE 454
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
434-627 |
2.19e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 51.77 E-value: 2.19e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 434 EPEPTTPKEPEPTTPKEPePTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTtPKEPEPTTTK 513
Cdd:PRK07003 359 EPAVTGGGAPGGGVPARV-AGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAP-PAAPAPPATA 436
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 514 EPESTTRKEPEPTTPKEPEPTTPKEPEPttPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPK 593
Cdd:PRK07003 437 DRGDDAADGDAPVPAKANARASADSRCD--ERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPA 514
|
170 180 190
....*....|....*....|....*....|....
gi 1907070847 594 EPepttPKEPEPTTPKEPEPTTPkEPEPTTRKEP 627
Cdd:PRK07003 515 AA----SREDAPAAAAPPAPEAR-PPTPAAAAPA 543
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
488-650 |
2.74e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 51.50 E-value: 2.74e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 488 PKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 567
Cdd:PRK14948 361 PSAFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATTPSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLN 440
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 568 PKE---------PEPTT------------------------------------------------------PKEPEPTTP 584
Cdd:PRK14948 441 LEElwqqilaklELPSTrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnleSQSGSASNT 520
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070847 585 KKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKK 650
Cdd:PRK14948 521 AKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTP 586
|
|
| NESP55 |
pfam06390 |
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian ... |
483-650 |
2.95e-06 |
|
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian neuroendocrine-specific golgi protein P55 (NESP55) sequences. NESP55 is a novel member of the chromogranin family and is a soluble, acidic, heat-stable secretory protein that is expressed exclusively in endocrine and nervous tissues, although less widely than chromogranins.
Pssm-ID: 115071 [Multi-domain] Cd Length: 261 Bit Score: 49.86 E-value: 2.95e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 483 PEPTTPKEPEPTTLKEPEPTTPKEPEPTTTK-EPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 561
Cdd:pfam06390 81 PEPSEPESDHEDEDFEPELARPECLEYDEDDfDTETDSETEPESDIESETEFETEPETEPDTAPTTEPETEPEDEPGPVV 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 562 EPEPT---TPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPT 638
Cdd:pfam06390 161 PKGATfhqSLTERLHALKLQSADASPRRAPPSTQEPESAREGEEPERGPLDKDPRDPEEEEEEKEEEKQQPHRCKPKKPA 240
|
170
....*....|..
gi 1907070847 639 TPKEPEPTTPKK 650
Cdd:pfam06390 241 RRRDPSPESPPK 252
|
|
| NESP55 |
pfam06390 |
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian ... |
363-533 |
3.74e-06 |
|
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian neuroendocrine-specific golgi protein P55 (NESP55) sequences. NESP55 is a novel member of the chromogranin family and is a soluble, acidic, heat-stable secretory protein that is expressed exclusively in endocrine and nervous tissues, although less widely than chromogranins.
Pssm-ID: 115071 [Multi-domain] Cd Length: 261 Bit Score: 49.86 E-value: 3.74e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 363 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP--KEPEPTTPKEPEPTT 439
Cdd:pfam06390 81 PEPSEPESDHEDEDFEPELARPECLEYDEDDfDTETDSETEPESDIESETEFETEPETEPDTAptTEPETEPEDEPGPVV 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 440 PKEPEPTTPKEPEPTTLKEPEP-TTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPEST 518
Cdd:pfam06390 161 PKGATFHQSLTERLHALKLQSAdASPRRAPPSTQEPESAREGEEPERGPLDKDPRDPEEEEEEKEEEKQQPHRCKPKKPA 240
|
170
....*....|....*
gi 1907070847 519 TRKEPEPTTPKEPEP 533
Cdd:pfam06390 241 RRRDPSPESPPKKGA 255
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
371-491 |
3.78e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 50.87 E-value: 3.78e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 371 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 449
Cdd:PRK14951 376 AEKKTPARPEAAAPaAAPVAQAAAAPAPAAA--PAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPA 453
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 1907070847 450 EPEPTTLKEPEPTTPkEPEPTTPKEPePTTLKEPEPTTPKEP 491
Cdd:PRK14951 454 QAAPETVAIPVRVAP-EPAVASAAPA-PAAAPAAARLTPTEE 493
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
491-570 |
3.86e-06 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 51.04 E-value: 3.86e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 491 PEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 570
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
323-440 |
4.12e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 50.87 E-value: 4.12e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 323 PEPTTPKEPEPTTP-KEPEPTTPKepePTTPKEPEPTTLKEP-EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 400
Cdd:PRK14951 376 AEKKTPARPEAAAPaAAPVAQAAA---APAPAAAPAAAASAPaAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPP 452
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1907070847 401 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 440
Cdd:PRK14951 453 AQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
397-492 |
4.19e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 50.58 E-value: 4.19e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 397 PTTPKEPEPTTPKEPEPTTPKepepTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKE-P 475
Cdd:PRK14950 362 PVPAPQPAKPTAAAPSPVRPT----PAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAPKLTRAAiP 437
|
90
....*....|....*..
gi 1907070847 476 EPTTLKEPEPTTPKEPE 492
Cdd:PRK14950 438 VDEKPKYTPPAPPKEEE 454
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
339-458 |
4.52e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 50.87 E-value: 4.52e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 339 PEPTTPKEPEPTTP-KEPEPTTlkePEPTTPKEPEPT-TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 416
Cdd:PRK14951 376 AEKKTPARPEAAAPaAAPVAQA---AAAPAPAAAPAAaASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPP 452
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 1907070847 417 KEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTLKE 458
Cdd:PRK14951 453 AQAAPETVAIPVRVAP-EPAVASAAPAPAAAPAAARLTPTEE 493
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
395-514 |
4.68e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 50.48 E-value: 4.68e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 395 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPK 473
Cdd:PRK14951 376 AEKKTPARPEAAAPaAAPVAQAAAAPAPAAA--PAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPA 453
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 1907070847 474 EPEPTTLKEPEPTTPkEPEPTTLKEPEPTTPKEPEPTTTKE 514
Cdd:PRK14951 454 QAAPETVAIPVRVAP-EPAVASAAPAPAAAPAAARLTPTEE 493
|
|
| PRK10819 |
PRK10819 |
transport protein TonB; Provisional |
331-460 |
4.88e-06 |
|
transport protein TonB; Provisional
Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 49.30 E-value: 4.88e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 331 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKEPEPTTPKEPEPTtpK 409
Cdd:PRK10819 42 PAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPvVIPKPEPKPKPKPKPKPKPVKKVEEQPK--R 119
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 1907070847 410 EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPEPTTLKEPE 460
Cdd:PRK10819 120 EVKPVEPRPASPFENTAPARPTSSTATAAASK-PVTSVSSGPRALSRNQPQ 169
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
523-640 |
5.41e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 50.48 E-value: 5.41e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 523 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPK 601
Cdd:PRK14951 376 AEKKTPARPEAAAPaAAPVAQAAAAPAPAAA--PAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPA 453
|
90 100 110
....*....|....*....|....*....|....*....
gi 1907070847 602 EPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTP 640
Cdd:PRK14951 454 QAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
428-504 |
5.83e-06 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 50.57 E-value: 5.83e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070847 428 EPTTPKEPEPTTPKEPEPTTPkepEPTtlkEPEPTTPKEPEPTTPKEPEPTTLkEPEPTTPKEPEPTTLKEPEPTTP 504
Cdd:PRK15313 559 EPDEPIIPDPVDPVIPDPVIP---DPV---DPDPVDPVIPDPVIPDPVDPDPV-DPEPVDPVIPDPTIPDIGQSDTP 628
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
505-809 |
6.06e-06 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 50.46 E-value: 6.06e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 505 KEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKEPE-- 580
Cdd:PTZ00449 493 KKKLAPIEEEDSDKHDEPPEGPEASGLPPKAPGDKEGEEGeHEDSKESDEPKEGGKPGEtKEGEVGKKPGPAKEHKPSki 572
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 581 PTTPKKPEptTPKEPE-PTTPKEP-EPTTPKEPE-PTTPKEPepttrKEPE----PTTPKEPE-PTTPKEPEPTTPKKPE 652
Cdd:PTZ00449 573 PTLSKKPE--FPKDPKhPKDPEEPkKPKRPRSAQrPTRPKSP-----KLPElldiPKSPKRPEsPKSPKRPPPPQRPSSP 645
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 653 PTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTPASEDSDDSKTTLKPQKPTKAPKPTKKPTKAPKKPTSTKKPKTPK 732
Cdd:PTZ00449 646 ERPEGPKIIKSPKPPKSPKPPFDPKFKEKFYDDYLDAAAKSKETKTTVVLDESFESILKETLPETPGTPFTTPRPLPPKL 725
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 733 TRKPKTTPSPLKTTSATP----ELNTTPLEVMLPTTTIPKQTPNPE--TAEVNPDHEDADGGEGEKPLI-PGPPVLFPTA 805
Cdd:PTZ00449 726 PRDEEFPFEPIGDPDAEQpddiEFFTPPEEERTFFHETPADTPLPDilAEEFKEEDIHAETGEPDEAMKrPDSPSEHEDK 805
|
....
gi 1907070847 806 IPGT 809
Cdd:PTZ00449 806 PPGD 809
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
500-589 |
6.24e-06 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 50.57 E-value: 6.24e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 500 EPTTPKEPEPTTTKEPEsttrkePEPTTPKEPEPTTPKEPEPTTPKEPEPtTPKEPEPTTPKEPEPTTPKEPEPTTPkep 579
Cdd:PRK15313 559 EPDEPIIPDPVDPVIPD------PVIPDPVDPDPVDPVIPDPVIPDPVDP-DPVDPEPVDPVIPDPTIPDIGQSDTP--- 628
|
90
....*....|
gi 1907070847 580 ePTTPKKPEP 589
Cdd:PRK15313 629 -PITEHQFRP 637
|
|
| PRK10819 |
PRK10819 |
transport protein TonB; Provisional |
523-641 |
6.25e-06 |
|
transport protein TonB; Provisional
Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 48.91 E-value: 6.25e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 523 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKKPEPTTPKEPEPTTPK 601
Cdd:PRK10819 42 PAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPvVIPKPEPKPKPKPKPKPKPVKKVEEQPKREV 121
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1907070847 602 EPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPK 641
Cdd:PRK10819 122 KPVEPRPASPFENTAPARPTSSTATAAASKPVTSVSSGPR 161
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
363-484 |
6.76e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 50.10 E-value: 6.76e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 363 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 441
Cdd:PRK14951 376 AEKKTPARPEAAAPaAAPVAQAAAAPAPAAA--PAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPA 453
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 1907070847 442 EPEPTTPKEPEPTtlkEPEPTTPKEPEPTTPKEPEPTTLKEPE 484
Cdd:PRK14951 454 QAAPETVAIPVRV---APEPAVASAAPAPAAAPAAARLTPTEE 493
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
475-600 |
7.81e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 50.10 E-value: 7.81e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 475 PEPTTLKEPEPTTP-KEPEPTTlkePEPTTPKEPEPTTTKEPesttrkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 553
Cdd:PRK14951 376 AEKKTPARPEAAAPaAAPVAQA---AAAPAPAAAPAAAASAP-------AAPPAAAPPAPVAAPAAAAPAAAPAAAPAAV 445
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 1907070847 554 EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTP 600
Cdd:PRK14951 446 ALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
|
|
| PRK08691 |
PRK08691 |
DNA polymerase III subunits gamma and tau; Validated |
388-597 |
8.01e-06 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 50.09 E-value: 8.01e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 388 EPTTPKEPEPTTPKEPepTTPKEPEPTtpkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEP 467
Cdd:PRK08691 373 ENTELQSPSAQTAEKE--TAAKKPQPR----PEAETAQTPVQTASAAAMPSEGKTAGPVSNQENNDVPPWEDAPDEAQTA 446
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 468 EPTTPKePEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEP-ESTTRKEPEPTTPKEPEPTTPKEPEPTTPKE 546
Cdd:PRK08691 447 AGTAQT-SAKSIQTASEAETPPENQVSKNKAADNETDAPLSEVPSENPiQATPNDEAVETETFAHEAPAEPFYGYGFPDN 525
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 1907070847 547 PEPttPKEPEPTTPKEPEPTTPKEPEPTTPKEpEPTTPKKPEPTTPKEPEP 597
Cdd:PRK08691 526 DCP--PEDGAEIPPPDWEHAAPADTAGGGADE-EAEAGGIGGNNTPSAPPP 573
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
328-649 |
8.74e-06 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 50.08 E-value: 8.74e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 328 PKEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPE-------PTTPKEPEPTTPKEPEPTTP 400
Cdd:PRK10263 366 PQTGEPVIAPAPEGYPQ-QSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQPAQqpyyapaPEQPAQQPYYAPAPEQPVAG 444
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 401 KE---PEPTTPKEPEPTTPKE---PEPTTPKEPE-PTTPKEPEPTTPKEP--EPTTPKEPEPTTLKEPEPTTPKEPEPTT 471
Cdd:PRK10263 445 NAwqaEEQQSTFAPQSTYQTEqtyQQPAAQEPLYqQPQPVEQQPVVEPEPvvEETKPARPPLYYFEEVEEKRAREREQLA 524
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 472 P-KEPEPTTLKEPEPTTPKEPEPTTLKEP--EPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTT----PKEPEPTTP 544
Cdd:PRK10263 525 AwYQPIPEPVKEPEPIKSSLKAPSVAAVPpvEAAAAVSPLASGVKKATLATGAAATVAAPVFSLANSggprPQVKEGIGP 604
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 545 KEPEPTTPKEP-----------------------------------------------------------------EPTT 559
Cdd:PRK10263 605 QLPRPKRIRVPtrrelasygiklpsqraaeekareaqrnqydsgdqynddeidamqqdelarqfaqtqqqrygeqyQHDV 684
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 560 PKEPEPT-----------------------------------------------TPKEP--EPTTPKEPEPTTPKKPEPT 590
Cdd:PRK10263 685 PVNAEDAdaaaeaelarqfaqtqqqrysgeqpaganpfslddfefspmkallddGPHEPlfTPIVEPVQQPQQPVAPQQQ 764
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907070847 591 TPKEPEPTTP----KEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPK 649
Cdd:PRK10263 765 YQQPQQPVAPqpqyQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQ 827
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
484-581 |
8.76e-06 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 49.80 E-value: 8.76e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 484 EPTTPKEPEPTTLKEPEPTTPkepEPTttkepesttrkEPEPTTPKEPEPTTPKEPEPtTPKEPEPTTPKEPEPTTPKEP 563
Cdd:PRK15313 559 EPDEPIIPDPVDPVIPDPVIP---DPV-----------DPDPVDPVIPDPVIPDPVDP-DPVDPEPVDPVIPDPTIPDIG 623
|
90
....*....|....*...
gi 1907070847 564 EPTTPkepePTTPKEPEP 581
Cdd:PRK15313 624 QSDTP----PITEHQFRP 637
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
421-517 |
9.05e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 49.81 E-value: 9.05e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 421 PTTPKEPEPTTPKEPEPTTPKepepTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKE-P 499
Cdd:PRK14950 362 PVPAPQPAKPTAAAPSPVRPT----PAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAPKLTRAAiP 437
|
90
....*....|....*...
gi 1907070847 500 EPTTPKEPEPTTTKEPES 517
Cdd:PRK14950 438 VDEKPKYTPPAPPKEEEK 455
|
|
| NESP55 |
pfam06390 |
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian ... |
427-605 |
9.23e-06 |
|
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian neuroendocrine-specific golgi protein P55 (NESP55) sequences. NESP55 is a novel member of the chromogranin family and is a soluble, acidic, heat-stable secretory protein that is expressed exclusively in endocrine and nervous tissues, although less widely than chromogranins.
Pssm-ID: 115071 [Multi-domain] Cd Length: 261 Bit Score: 48.32 E-value: 9.23e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 427 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTLK-EPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPK 505
Cdd:pfam06390 81 PEPSEPESDHEDEDFEPELARPECLEYDEDDfDTETDSETEPESDIESETEFETEPETEPDTAPTTEPETEPEDEPGPVV 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 506 EPEPT---TTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEpTTPKEPEPTTPKEPEpttpkEPEPTTPKEPEPT 582
Cdd:pfam06390 161 PKGATfhqSLTERLHALKLQSADASPRRAPPSTQEPESAREGEEPE-RGPLDKDPRDPEEEE-----EEKEEEKQQPHRC 234
|
170 180
....*....|....*....|...
gi 1907070847 583 TPKKPEPTTPKEPEPTTPKEPEP 605
Cdd:pfam06390 235 KPKKPARRRDPSPESPPKKGAIP 257
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
331-448 |
9.76e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 49.71 E-value: 9.76e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 331 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTlkePEPT-TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 408
Cdd:PRK14951 376 AEKKTPARPEAAAPaAAPVAQAAAAPAPAA---APAAaASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPP 452
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1907070847 409 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 448
Cdd:PRK14951 453 AQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
531-695 |
1.18e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 49.48 E-value: 1.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 531 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK---KPEPTTPKEPEPTTPKEPEPTT 607
Cdd:PRK07994 366 PEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSqllAARQQLQRAQGATKAKKSEPAA 445
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 608 PKEPEPtTPKEPEPTTRKEPEP-TTPKEPEPTTPKEPEPTTPkkpeptttspkTTTLKATTLAPKVTAPAEEIQNKPEET 686
Cdd:PRK07994 446 ASRARP-VNSALERLASVRPAPsALEKAPAKKEAYRWKATNP-----------VEVKKEPVATPKALKKALEHEKTPELA 513
|
....*....
gi 1907070847 687 TPASEDSDD 695
Cdd:PRK07994 514 AKLAAEAIE 522
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
503-596 |
1.27e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 49.04 E-value: 1.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 503 TPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKE-PE 580
Cdd:PRK14950 361 VPVPAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVrETATPPPVPPRPVAP--PVPHTPESAPKLTRAAiPV 438
|
90
....*....|....*.
gi 1907070847 581 PTTPKKPEPTTPKEPE 596
Cdd:PRK14950 439 DEKPKYTPPAPPKEEE 454
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
509-604 |
1.50e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 49.04 E-value: 1.50e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 509 PTTTKEPESTTRKEPEPTTPKepepTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKK-P 587
Cdd:PRK14950 362 PVPAPQPAKPTAAAPSPVRPT----PAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAPKLTRAAiP 437
|
90
....*....|....*..
gi 1907070847 588 EPTTPKEPEPTTPKEPE 604
Cdd:PRK14950 438 VDEKPKYTPPAPPKEEE 454
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
355-474 |
1.55e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 48.94 E-value: 1.55e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 355 PEPTTLKEPEPTTP-KEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 433
Cdd:PRK14951 376 AEKKTPARPEAAAPaAAPVAQAAAAPAPAAA--PAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPA 453
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 1907070847 434 EPEPTTPKEPEPTTPkEPEPTTLKEPEPTTPKEPEPTTPKE 474
Cdd:PRK14951 454 QAAPETVAIPVRVAP-EPAVASAAPAPAAAPAAARLTPTEE 493
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
470-580 |
1.59e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 49.04 E-value: 1.59e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 470 TTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPT-TPKEPEPTTTKEPESTTRKEPEPTTPK-EPEPTTPKEPEPTTPkeP 547
Cdd:PRK14950 343 TTSYGQLPLELAVIEALLVPVPAPQPAKPTAAApSPVRPTPAPSTRPKAAAAANIPPKEPVrETATPPPVPPRPVAP--P 420
|
90 100 110
....*....|....*....|....*....|....
gi 1907070847 548 EPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKEPE 580
Cdd:PRK14950 421 VPHTPESAPKLTRAAiPVDEKPKYTPPAPPKEEE 454
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
365-599 |
1.61e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 49.17 E-value: 1.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 365 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP---------TTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 435
Cdd:PHA03247 255 PAPPPVVGEGADRAPETARGATGPPPPPEAAAPNGAAAPPDgvwgaalagAPLALPAPPDPPPPAPAGDAEEEDDEDGAM 334
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 436 EPTTPKePEPTT------PKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTpKEPEPTTLKEPEPTTPKEPEP 509
Cdd:PHA03247 335 EVVSPL-PRPRQhyplgfPKRRRPTWTPPSSLEDLSAGRHHPKRASLPTRKRRSARHA-ATPFARGPGGDDQTRPAAPVP 412
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 510 TTTKEPESTTRKEPEPTTPKEPEPT-TPKEPE-PTTPKEPEPTTPKEPepttPKEPEPTTPKEPEPTTPKEPEPTTPKKP 587
Cdd:PHA03247 413 ASVPTPAPTPVPASAPPPPATPLPSaEPGSDDgPAPPPERQPPAPATE----PAPDDPDDATRKALDALRERRPPEPPGA 488
|
250
....*....|..
gi 1907070847 588 EPTTPKEPEPTT 599
Cdd:PHA03247 489 DLAELLGRHPDT 500
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
331-535 |
1.70e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 49.17 E-value: 1.70e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 331 PEPTTPKEPEPTTPKEPEPTTPKEPEP---------TTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP--------- 392
Cdd:PHA03247 269 PETARGATGPPPPPEAAAPNGAAAPPDgvwgaalagAPLALPAPPDPPPPAPAGDAEEEDDEDGAMEVVSPlprprqhyp 348
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 393 ------KEPEPTTPKEPEPTTPKEPEPttPKEPEPTTPKEpepTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKE 466
Cdd:PHA03247 349 lgfpkrRRPTWTPPSSLEDLSAGRHHP--KRASLPTRKRR---SARHAATPFARGPGGDDQTRPAAPVPASVPTPAPTPV 423
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907070847 467 P--EPTTPKEPEPTtlkePEPTTPKEPEPTtlkePEPTTPKEPEPTTTKEPESTTRKEPEP-TTPKEPEPTT 535
Cdd:PHA03247 424 PasAPPPPATPLPS----AEPGSDDGPAPP----PERQPPAPATEPAPDDPDDATRKALDAlRERRPPEPPG 487
|
|
| NESP55 |
pfam06390 |
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian ... |
323-497 |
1.74e-05 |
|
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian neuroendocrine-specific golgi protein P55 (NESP55) sequences. NESP55 is a novel member of the chromogranin family and is a soluble, acidic, heat-stable secretory protein that is expressed exclusively in endocrine and nervous tissues, although less widely than chromogranins.
Pssm-ID: 115071 [Multi-domain] Cd Length: 261 Bit Score: 47.55 E-value: 1.74e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 323 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK-EPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 401
Cdd:pfam06390 81 PEPSEPESDHEDEDFEPELARPECLEYDEDDfDTETDSETEPESDIESETEFETEPETEPDTAPTTEPETEPEDEPGPVV 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 402 EPEPT---TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPT 478
Cdd:pfam06390 161 PKGATfhqSLTERLHALKLQSADASPRRAPPSTQEPESAREGEEPERGPLDKDPRDPEEEEEEKEEEKQQPHRCKPKKPA 240
|
170
....*....|....*....
gi 1907070847 479 TLKEPEPTTPKEPEPTTLK 497
Cdd:pfam06390 241 RRRDPSPESPPKKGAIPIR 259
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
436-522 |
2.25e-05 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 48.64 E-value: 2.25e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 436 EPTTPKEPEPTTPKEPEPTTlkePEPTtpkEPEPTTPKEPEPtTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEP 515
Cdd:PRK15313 559 EPDEPIIPDPVDPVIPDPVI---PDPV---DPDPVDPVIPDP-VIPDPVDPDPVDPEPVDPVIPDPTIPDIGQSDTPPIT 631
|
....*..
gi 1907070847 516 ESTTRKE 522
Cdd:PRK15313 632 EHQFRPE 638
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
459-556 |
2.64e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 48.27 E-value: 2.64e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 459 PEPTTPKEPEPTtPKEPEPTTLKEPEPTTPKEPEPttlKEPEPTTPkePEPTTTKEPESTtrkePEPTTPKEPEPTTPKE 538
Cdd:PRK14950 366 PQPAKPTAAAPS-PVRPTPAPSTRPKAAAAANIPP---KEPVRETA--TPPPVPPRPVAP----PVPHTPESAPKLTRAA 435
|
90
....*....|....*....
gi 1907070847 539 -PEPTTPKEPEPTTPKEPE 556
Cdd:PRK14950 436 iPVDEKPKYTPPAPPKEEE 454
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
460-557 |
2.73e-05 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 48.26 E-value: 2.73e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 460 EPTTPKEPEPTTPKEPEPTTlkePEPTTPKEPEPTTlkePEPTTPK--EPEPTttkepesttrkEPEPTTPKEPEPTTPK 537
Cdd:PRK15313 559 EPDEPIIPDPVDPVIPDPVI---PDPVDPDPVDPVI---PDPVIPDpvDPDPV-----------DPEPVDPVIPDPTIPD 621
|
90 100
....*....|....*....|
gi 1907070847 538 EPEPTTPkepePTTPKEPEP 557
Cdd:PRK15313 622 IGQSDTP----PITEHQFRP 637
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
565-649 |
2.92e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 47.88 E-value: 2.92e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 565 PTTPKEPEPTTPKEPEPTTPKKP--EPTTPKEPEPTTPKEPEPTT-PKEPEPTTPKEPEPTTRKEPEPTTPKE--PEPTT 639
Cdd:PRK14950 362 PVPAPQPAKPTAAAPSPVRPTPApsTRPKAAAAANIPPKEPVRETaTPPPVPPRPVAPPVPHTPESAPKLTRAaiPVDEK 441
|
90
....*....|
gi 1907070847 640 PKEPEPTTPK 649
Cdd:PRK14950 442 PKYTPPAPPK 451
|
|
| PRK10819 |
PRK10819 |
transport protein TonB; Provisional |
522-639 |
3.07e-05 |
|
transport protein TonB; Provisional
Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 46.60 E-value: 3.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 522 EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTPKEPEPttpkEPEPTTPKE---PEPTTPKKPEPTTPKEPEPT 598
Cdd:PRK10819 36 HQVIELPAPAQPISVTMVAPADLEPPQAVQP-PPEPVVEPEPEP----EPIPEPPKEapvVIPKPEPKPKPKPKPKPKPV 110
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 1907070847 599 TPKEPEP---TTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTT 639
Cdd:PRK10819 111 KKVEEQPkreVKPVEPRPASPFENTAPARPTSSTATAAASKPVT 154
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
320-479 |
3.75e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 48.01 E-value: 3.75e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 320 RKEPEPTTPKEPEPTTPKEPEPttPKEPEPTTPKEPEPTTlKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 399
Cdd:PHA03247 354 RRRPTWTPPSSLEDLSAGRHHP--KRASLPTRKRRSARHA-ATPFARGPGGDDQTRPAAPVPASVPTPAPTPVPASAPPP 430
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 400 PKEPEPTtpkePEPTTPKEPEPTtpkePEPTTPKEPEPTTPKEPEPTTPKEPEptTLKEPEPTTPKEPEPTTPKEPEPTT 479
Cdd:PHA03247 431 PATPLPS----AEPGSDDGPAPP----PERQPPAPATEPAPDDPDDATRKALD--ALRERRPPEPPGADLAELLGRHPDT 500
|
|
| PRK10819 |
PRK10819 |
transport protein TonB; Provisional |
322-429 |
3.85e-05 |
|
transport protein TonB; Provisional
Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 46.21 E-value: 3.85e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 322 EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTLKEPEPTTPKEPEPTTPKEPEPTtpKEPEPTTPKEPEPTTPK 401
Cdd:PRK10819 59 EPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPV-VIPKPEPKPKPKPKPKPKPVKKVEEQPK--REVKPVEPRPASPFENT 135
|
90 100
....*....|....*....|....*...
gi 1907070847 402 EPEPTTPKEPEPTTPKePEPTTPKEPEP 429
Cdd:PRK10819 136 APARPTSSTATAAASK-PVTSVSSGPRA 162
|
|
| PTZ00441 |
PTZ00441 |
sporozoite surface protein 2 (SSP2); Provisional |
388-612 |
3.86e-05 |
|
sporozoite surface protein 2 (SSP2); Provisional
Pssm-ID: 240420 [Multi-domain] Cd Length: 576 Bit Score: 47.65 E-value: 3.86e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 388 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEP 467
Cdd:PTZ00441 279 EEECPVEPEPLPVPAPVPPTPEDDNPRPTDDEFAVPNFNEGLDVPDNPQDPVPPPNEGKDGNPNEENLFPPGDDEVPDES 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 468 E-PTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEpttpKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKE 546
Cdd:PTZ00441 359 NvPPNPPNVPGGSNSEFSSDVENPPNPPNPDIPE----QEPNIPEDSNKEVPEDVPMEPEDDRDNNFNEPKKPENKGDGQ 434
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907070847 547 PEPTTPK--EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEpEPTTPKEPEPTTPKEPE 612
Cdd:PTZ00441 435 NEPVIPKplDNERDQSNKNKQVNPGNRHNSEDRYTRPHGRNNENRNYNNK-NSDIPKHPERSEHEQPE 501
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
435-532 |
4.05e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 47.50 E-value: 4.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 435 PEPTTPKEPEPTtPKEPEPTTLKEPEPTTPKEPEPTTPKepepttlkePEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKE 514
Cdd:PRK14950 366 PQPAKPTAAAPS-PVRPTPAPSTRPKAAAAANIPPKEPV---------RETATPPPVPPRPVAPPVPHTPESAPKLTRAA 435
|
90
....*....|....*....
gi 1907070847 515 -PESTTRKEPEPTTPKEPE 532
Cdd:PRK14950 436 iPVDEKPKYTPPAPPKEEE 454
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
352-520 |
4.14e-05 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 47.77 E-value: 4.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 352 PKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEpTTPKEPEPTTPKEPEPTTPKEPePTTPKEPEPTTPKEPEPTT 431
Cdd:PRK10263 716 PAGANPFSLDDFEFSPMKALLDDGPHEPLFTPIVEPV-QQPQQPVAPQQQYQQPQQPVAP-QPQYQQPQQPVAPQPQYQQ 793
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 432 PKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEP--EPTTPKEPEPT-TLKEP------------EPTTPKePEPTTL 496
Cdd:PRK10263 794 PQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQyqQPQQPVAPQPQdTLLHPllmrngdsrplhKPTTPL-PSLDLL 872
|
170 180
....*....|....*....|....
gi 1907070847 497 KEPepttPKEPEPTTTKEPESTTR 520
Cdd:PRK10263 873 TPP----PSEVEPVDTFALEQMAR 892
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
515-628 |
4.21e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 47.40 E-value: 4.21e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 515 PESTTRKEPEPTTP---KEPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPT 590
Cdd:PRK14951 376 AEKKTPARPEAAAPaaaPVAQAAAAPAPAAAPAAAaSAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQA 455
|
90 100 110
....*....|....*....|....*....|....*...
gi 1907070847 591 TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPE 628
Cdd:PRK14951 456 APETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEE 493
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
501-608 |
4.28e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 47.40 E-value: 4.28e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 501 PTTPKEPEPTTTKEPESTTRKEPEPTTPKE----PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 576
Cdd:PRK14951 381 PARPEAAAPAAAPVAQAAAAPAPAAAPAAAasapAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQAAPETV 460
|
90 100 110
....*....|....*....|....*....|..
gi 1907070847 577 KEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTP 608
Cdd:PRK14951 461 AIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
499-620 |
4.62e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 47.40 E-value: 4.62e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 499 PEPTTPKEPEPtttkePESTTRKEPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 577
Cdd:PRK14951 376 AEKKTPARPEA-----AAPAAAPVAQAAAAPAPAAAPAAAaSAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPA 450
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 1907070847 578 EPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 620
Cdd:PRK14951 451 PPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEE 493
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
468-690 |
4.96e-05 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 47.23 E-value: 4.96e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 468 EPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPE--PTTPKEPEPTTTKEPESTTRKEPEPTTPKEP-------EPTTPKE 538
Cdd:PLN03209 308 ETTAPLTPMEELLAKIPSQRVPPKESDAADGPKpvPTKPVTPEAPSPPIEEEPPQPKAVVPRPLSPytayedlKPPTSPI 387
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 539 PEPTTPKEPEPTT------PKEPEPTTPKEPEPTTP-KEPEPTTPKEPEPTTP--KKPEPTTPKEPEPTTPKEPEPTTPK 609
Cdd:PLN03209 388 PTPPSSSPASSKSvdavakPAEPDVVPSPGSASNVPeVEPAQVEAKKTRPLSPyaRYEDLKPPTSPSPTAPTGVSPSVSS 467
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 610 EP-EPTTPKEPEPTTRKEPEPTTPKEPEPTTP-------KEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQN 681
Cdd:PLN03209 468 TSsVPAVPDTAPATAATDAAAPPPANMRPLSPyavyddlKPPTSPSPAAPVGKVAPSSTNEVVKVGNSAPPTALADEQHH 547
|
....*....
gi 1907070847 682 KPEETTPAS 690
Cdd:PLN03209 548 AQPKPRPLS 556
|
|
| dnaA |
PRK14086 |
chromosomal replication initiator protein DnaA; |
322-518 |
4.99e-05 |
|
chromosomal replication initiator protein DnaA;
Pssm-ID: 237605 [Multi-domain] Cd Length: 617 Bit Score: 47.13 E-value: 4.99e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 322 EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTT-PKEPEPTTPKEPEPTtPKEPEPTTP 400
Cdd:PRK14086 89 DPSAGEPAPPPPHARRTSEPELPRPGRRPYEGYGGPRADDRPPGLPRQDQLPTArPAYPAYQQRPEPGAW-PRAADDYGW 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 401 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP-KEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTT 479
Cdd:PRK14086 168 QQQRLGFPPRAPYASPASYAPEQERDREPYDAGRPEYDQRrRDYDHPRPDWDRPRRDRTDRPEPPPGAGHVHRGGPGPPE 247
|
170 180 190
....*....|....*....|....*....|....*....
gi 1907070847 480 LKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPEST 518
Cdd:PRK14086 248 RDDAPVVPIRPSAPGPLAAQPAPAPGPGEPTARLNPKYT 286
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
513-581 |
5.10e-05 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 44.01 E-value: 5.10e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070847 513 KEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 581
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
|
|
| DUF4045 |
pfam13254 |
Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. ... |
549-688 |
5.63e-05 |
|
Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. This domain family is found in bacteria and eukaryotes, and is typically between 384 and 430 amino acids in length.
Pssm-ID: 433066 [Multi-domain] Cd Length: 415 Bit Score: 46.70 E-value: 5.63e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 549 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPePTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPE 628
Cdd:pfam13254 197 PNSFKEVTPVGLMRSPAPGGHSKSPSVSGISADSSPTKEEPSEEADT-LSTDKEQSPAPTSASEPPPKTKELPKDSEEPA 275
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907070847 629 PTTPKEPEPTTPKEP--EPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTP 688
Cdd:pfam13254 276 APSKSAEASTEKKEPdtESSPETSSEKSAPSLLSPVSKASIDKPLSSPDRDPLSPKPKPQSP 337
|
|
| TonB |
COG0810 |
Periplasmic protein TonB, links inner and outer membranes [Cell wall/membrane/envelope ... |
524-650 |
5.86e-05 |
|
Periplasmic protein TonB, links inner and outer membranes [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 223880 [Multi-domain] Cd Length: 244 Bit Score: 45.93 E-value: 5.86e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 524 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkepepttPKKPEPTTPKEPEPTTPKEP 603
Cdd:COG0810 35 ELVPLAVFLLAAKVLEAPTEEPQPEPEPPEEQPKPPTEPETPPEPTPPKPKEK-------PKPEKKPKKPKPKPKPKPKP 107
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 1907070847 604 EPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKK 650
Cdd:COG0810 108 KPKVKPQPKPKKPPSKTAAKAPAAPNQPARPPSAASASGAATGPSAS 154
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
377-457 |
6.74e-05 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 44.01 E-value: 6.74e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 377 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPttpkEPEPTTL 456
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP----EPGAATL 116
|
.
gi 1907070847 457 K 457
Cdd:pfam05887 117 K 117
|
|
| PRK10819 |
PRK10819 |
transport protein TonB; Provisional |
387-516 |
7.26e-05 |
|
transport protein TonB; Provisional
Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 45.44 E-value: 7.26e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 387 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKEPEPttLKEPEPTTPK 465
Cdd:PRK10819 42 PAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPvVIPKPEPKPKPKPKPKPKP--VKKVEEQPKR 119
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 1907070847 466 EPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKePEPTTPKEPEPTTTKEPE 516
Cdd:PRK10819 120 EVKPVEPRPASPFENTAPARPTSSTATAAASK-PVTSVSSGPRALSRNQPQ 169
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
443-678 |
7.71e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 47.09 E-value: 7.71e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 443 PEPTTPKEPEPTTL-KEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTtlkePEPTTPKEPEPTTTKEPESTTRK 521
Cdd:PHA03307 65 FEPPTGPPPGPGTEaPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPP----PPTPPPASPPPSPAPDLSEMLRP 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 522 EPEPTTPKEPEPttPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPK 601
Cdd:PHA03307 141 VGSPGPPPAASP--PAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASAS 218
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070847 602 EPEPTTPKEPEPTTPKEPEPTTRKEPePTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEE 678
Cdd:PHA03307 219 SPAPAPGRSAADDAGASSSDSSSSES-SGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRER 294
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
317-394 |
7.85e-05 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 46.81 E-value: 7.85e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907070847 317 STTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 394
Cdd:PRK12270 40 STAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
361-429 |
8.32e-05 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 43.63 E-value: 8.32e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070847 361 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 429
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
|
|
| PHA03264 |
PHA03264 |
envelope glycoprotein D; Provisional |
542-647 |
8.48e-05 |
|
envelope glycoprotein D; Provisional
Pssm-ID: 223029 [Multi-domain] Cd Length: 416 Bit Score: 46.15 E-value: 8.48e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 542 TTPKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 621
Cdd:PHA03264 253 VVPPYFEESKGYEPPPA-PSGGSPAPPGDDRPEAKPEPGPVEDGAPGRETGGEGEGPEPAGRDGAAGGEPKPGPPRPAPD 331
|
90 100
....*....|....*....|....*..
gi 1907070847 622 TTRKEPEPTTPKEP-EPTTPKEPEPTT 647
Cdd:PHA03264 332 ADRPEGWPSLEAITfPPPTPATPAVPR 358
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
505-573 |
8.48e-05 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 43.63 E-value: 8.48e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070847 505 KEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 573
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
401-481 |
8.65e-05 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 43.63 E-value: 8.65e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 401 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPttpkEPEPTTL 480
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP----EPGAATL 116
|
.
gi 1907070847 481 K 481
Cdd:pfam05887 117 K 117
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
483-562 |
8.69e-05 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 46.81 E-value: 8.69e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 483 PEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 562
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
|
| PspC_subgroup_1 |
NF033838 |
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
505-649 |
8.88e-05 |
|
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 411407 [Multi-domain] Cd Length: 684 Bit Score: 46.54 E-value: 8.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 505 KEPEPTTTKEPESTTRKEPEPTTPKEPEPTtpKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPeptTPKEPEPTTP 584
Cdd:NF033838 351 KEAELELVKEEAKEPRNEEKIKQAKAKVES--KKAEATRLEKIKTDRKKAEEEAKRKAAEEDKVKEK---PAEQPQPAPA 425
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070847 585 KKPEPTTPKEPEPT-TPKEPEPTTPKEPEPTTPKEPEpttrkEPEPTTPKEPePTTPKEPEPTTPK 649
Cdd:NF033838 426 PQPEKPAPKPEKPAeQPKAEKPADQQAEEDYARRSEE-----EYNRLTQQQP-PKTEKPAQPSTPK 485
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
320-416 |
8.98e-05 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 44.99 E-value: 8.98e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 320 RKEPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPt 398
Cdd:PRK11633 50 RDEPDMMPAaTQALPTQPPEGAAEAVRAGDAAAP-SLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQKVEA- 127
|
90
....*....|....*...
gi 1907070847 399 tPKEPEPTTPKEPEPTTP 416
Cdd:PRK11633 128 -PPAPKPEPKPVVEEKAA 144
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
322-440 |
9.10e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 46.41 E-value: 9.10e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 322 EPEPTTPKEPEPTTP---KEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEP--TTPKEPEPTTPKEPE 396
Cdd:PRK12323 449 APAPAPAAAPAAAARpaaAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPaqPDAAPAGWVAESIPD 528
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1907070847 397 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE--PTTPKEPEPTTP 440
Cdd:PRK12323 529 PATADPDDAFETLAPAPAAAPAPRAAAATEPVvaPRPPRASASGLP 574
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
345-413 |
9.89e-05 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 43.24 E-value: 9.89e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070847 345 KEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 413
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
|
|
| PRK13108 |
PRK13108 |
prolipoprotein diacylglyceryl transferase; Reviewed |
328-476 |
1.03e-04 |
|
prolipoprotein diacylglyceryl transferase; Reviewed
Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 46.13 E-value: 1.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 328 PKEPEPTT-PKEPEPTTPKEPEPTTPKEP-EPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPEP 405
Cdd:PRK13108 295 ALEREPAElAAAAVASAASAVGPVGPGEPnQPDDVAEAVKAEVAEVTDEVAAESVVQVADRDGESTPA-VEETSEADIER 373
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907070847 406 TTPKEPEPTTPKEPEPTTPKEPE-PTTPKEPEPTTPKEPEPTTPKEPEPTT-LKEPEPTTPKEPEPtTPKEPE 476
Cdd:PRK13108 374 EQPGDLAGQAPAAHQVDAEAASAaPEEPAALASEAHDETEPEVPEKAAPIPdPAKPDELAVAGPGD-DPAEPD 445
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
515-690 |
1.06e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 46.11 E-value: 1.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 515 PESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKE 594
Cdd:PRK14948 366 SEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATT--PSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLNLEE 443
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 595 ---------PEPTT------------------------------------------------------PKEPEPTTPKEP 611
Cdd:PRK14948 444 lwqqilaklELPSTrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnleSQSGSASNTAKT 523
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070847 612 EPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKKpeptttspktttlkATTLAPKVTAPAEEIQNKPEETTPAS 690
Cdd:PRK14948 524 PPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQA--------------SSNAPAQIPADSSPPPPIPEEPTPSP 588
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
321-389 |
1.08e-04 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 43.24 E-value: 1.08e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070847 321 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 389
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
323-636 |
1.09e-04 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 46.62 E-value: 1.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 323 PEPTTPKEPEPTTPKEPEPTTPKE---PEPTTPKEPEPTTLKE---PEPTTPKEPE-PTTPKEPEPTTPKEP--EPTTPK 393
Cdd:PRK10263 423 PAPEQPAQQPYYAPAPEQPVAGNAwqaEEQQSTFAPQSTYQTEqtyQQPAAQEPLYqQPQPVEQQPVVEPEPvvEETKPA 502
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 394 EPEPTTPKEPEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTPKEP--EPTTPKEPEPTTLKEPEPTT------- 463
Cdd:PRK10263 503 RPPLYYFEEVEEKRAREREQLAAwYQPIPEPVKEPEPIKSSLKAPSVAAVPpvEAAAAVSPLASGVKKATLATgaaatva 582
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 464 -------------PKEPEPTTPKEPEPTTLKEPeptTPKEPEPTTLKEP------------------------------- 499
Cdd:PRK10263 583 apvfslansggprPQVKEGIGPQLPRPKRIRVP---TRRELASYGIKLPsqraaeekareaqrnqydsgdqynddeidam 659
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 500 ---------------------EPTTPKEPEPTTTKEPESTTRK------------EPEPTTP-----------KEPEPTT 535
Cdd:PRK10263 660 qqdelarqfaqtqqqrygeqyQHDVPVNAEDADAAAEAELARQfaqtqqqrysgeQPAGANPfslddfefspmKALLDDG 739
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 536 PKEP--EPTTPKEPEPTTPKEPEPTTPKEPEPTTP----KEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEpttPK 609
Cdd:PRK10263 740 PHEPlfTPIVEPVQQPQQPVAPQQQYQQPQQPVAPqpqyQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQ---PQ 816
|
410 420
....*....|....*....|....*..
gi 1907070847 610 EPEPTTPKEPEPTTRKEPEPTTPKEPE 636
Cdd:PRK10263 817 YQQPQQPVAPQPQYQQPQQPVAPQPQD 843
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
323-404 |
1.14e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 45.96 E-value: 1.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 323 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK-EPEPTTLKEPEPTTPkePEPTTPKEPEPTTPKE-PEPTTPKEPEPTTP 400
Cdd:PRK14950 373 AAAPSPVRPTPAPSTRPKAAAAANIPPKEPVrETATPPPVPPRPVAP--PVPHTPESAPKLTRAAiPVDEKPKYTPPAPP 450
|
....
gi 1907070847 401 KEPE 404
Cdd:PRK14950 451 KEEE 454
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
337-405 |
1.19e-04 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 43.24 E-value: 1.19e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070847 337 KEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 405
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
459-576 |
1.22e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 45.86 E-value: 1.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 459 PEPTTPKEPEPTTP-KEPEPTTlkePEPTTPKEPEPTTLKEP-EPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTP 536
Cdd:PRK14951 376 AEKKTPARPEAAAPaAAPVAQA---AAAPAPAAAPAAAASAPaAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPP 452
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1907070847 537 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 576
Cdd:PRK14951 453 AQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
317-396 |
1.23e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 45.96 E-value: 1.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 317 STTRKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKEP 395
Cdd:PRK14950 375 APSPVRPTPAPSTRPKAAAAANIPPKEPV-RETATPPPVPPRPVAPPVPHTPESAPKLTRAAiPVDEKPKYTPPAPPKEE 453
|
.
gi 1907070847 396 E 396
Cdd:PRK14950 454 E 454
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
417-497 |
1.25e-04 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 43.24 E-value: 1.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 417 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPttpkEPEPTTL 496
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP----EPGAATL 116
|
.
gi 1907070847 497 K 497
Cdd:pfam05887 117 K 117
|
|
| dnaA |
PRK14086 |
chromosomal replication initiator protein DnaA; |
363-558 |
1.26e-04 |
|
chromosomal replication initiator protein DnaA;
Pssm-ID: 237605 [Multi-domain] Cd Length: 617 Bit Score: 45.97 E-value: 1.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 363 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT-PKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTPK 441
Cdd:PRK14086 98 PPPHARRTSEPELPRPGRRPYEGYGGPRADDRPPGLPRQDQLPTArPAYPAYQQRPEPGAW-PRAADDYGWQQQRLGFPP 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 442 EPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTlkEPEPTTPKEpEPTTLKEPEPTTPKEPEptTTKEPESTTRK 521
Cdd:PRK14086 177 RAPYASPASYAPEQERDREPYDAGRPEYDQRRRDYDHP--RPDWDRPRR-DRTDRPEPPPGAGHVHR--GGPGPPERDDA 251
|
170 180 190
....*....|....*....|....*....|....*..
gi 1907070847 522 EPEPTTPKEPEPTtPKEPEPTtPKEPEPTTPKEPEPT 558
Cdd:PRK14086 252 PVVPIRPSAPGPL-AAQPAPA-PGPGEPTARLNPKYT 286
|
|
| TonB |
COG0810 |
Periplasmic protein TonB, links inner and outer membranes [Cell wall/membrane/envelope ... |
343-490 |
1.29e-04 |
|
Periplasmic protein TonB, links inner and outer membranes [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 223880 [Multi-domain] Cd Length: 244 Bit Score: 44.78 E-value: 1.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 343 TPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK-EPEP 421
Cdd:COG0810 24 VFLHQEDFVGIELVPLAVFLLAAKVLEAPTEEPQPEPEPPEEQPKPPTEPETPPEPTPPKPKEKPKPEKKPKKPKpKPKP 103
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070847 422 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKE 490
Cdd:COG0810 104 KPKPKPKVKPQPKPKKPPSKTAAKAPAAPNQPARPPSAASASGAATGPSASYLSGLRRAIRRAPRYPAQ 172
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
569-637 |
1.34e-04 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 42.86 E-value: 1.34e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070847 569 KEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEP 637
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
|
|
| PTZ00441 |
PTZ00441 |
sporozoite surface protein 2 (SSP2); Provisional |
484-644 |
1.44e-04 |
|
sporozoite surface protein 2 (SSP2); Provisional
Pssm-ID: 240420 [Multi-domain] Cd Length: 576 Bit Score: 45.73 E-value: 1.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 484 EPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 563
Cdd:PTZ00441 279 EEECPVEPEPLPVPAPVPPTPEDDNPRPTDDEFAVPNFNEGLDVPDNPQDPVPPPNEGKDGNPNEENLFPPGDDEVPDES 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 564 epttpkePEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEpttpKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEP 643
Cdd:PTZ00441 359 -------NVPPNPPNVPGGSNSEFSSDVENPPNPPNPDIPE----QEPNIPEDSNKEVPEDVPMEPEDDRDNNFNEPKKP 427
|
.
gi 1907070847 644 E 644
Cdd:PTZ00441 428 E 428
|
|
| PRK14949 |
PRK14949 |
DNA polymerase III subunits gamma and tau; Provisional |
320-467 |
1.45e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237863 [Multi-domain] Cd Length: 944 Bit Score: 45.87 E-value: 1.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 320 RKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT--PKEPEP 397
Cdd:PRK14949 637 KKSSADRKPKTPPSRAPPASLSKPASSPDASQTSASFDLDPDFELATHQSVPEAALASGSAPAPPPVPDPYDrpPWEEAP 716
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907070847 398 TTpkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE--PTTPKEPEPTTPKEPEPTTLKEPEPTTPKEP 467
Cdd:PRK14949 717 EV--ASANDGPNNAAEGNLSESVEDASNSELQAVEQQAThqPQVQAEAQSPASTTALTQTSSEVQDTELNLV 786
|
|
| PRK10819 |
PRK10819 |
transport protein TonB; Provisional |
434-573 |
1.48e-04 |
|
transport protein TonB; Provisional
Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 44.67 E-value: 1.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 434 EPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPkEPEPTTPKEPEPTTLKEPEPTTPKepepttlkePEPTTPKEPEPTTTK 513
Cdd:PRK10819 36 HQVIELPAPAQPISVTMVAPADLEPPQAVQP-PPEPVVEPEPEPEPIPEPPKEAPV---------VIPKPEPKPKPKPKP 105
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 514 EPESTTRKEPEPTtpKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPEP 573
Cdd:PRK10819 106 KPKPVKKVEEQPK--REVKPVEPRPASPFENTAPARPTSSTATAAASK-PVTSVSSGPRA 162
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
520-616 |
1.60e-04 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 44.22 E-value: 1.60e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 520 RKEPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPt 598
Cdd:PRK11633 50 RDEPDMMPAaTQALPTQPPEGAAEAVRAGDAAAP-SLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQKVEA- 127
|
90
....*....|....*...
gi 1907070847 599 tPKEPEPTTPKEPEPTTP 616
Cdd:PRK11633 128 -PPAPKPEPKPVVEEKAA 144
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
561-629 |
1.60e-04 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 42.86 E-value: 1.60e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070847 561 KEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEP 629
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
|
|
| PRK08691 |
PRK08691 |
DNA polymerase III subunits gamma and tau; Validated |
317-493 |
1.65e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 45.85 E-value: 1.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 317 STTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKePEPTTPKEPEPTTPKEPEPTTPKEPE 396
Cdd:PRK08691 400 AETAQTPVQTASAAAMPSEGKTAGPVSNQENNDVPPWEDAPDEAQTAAGTAQT-SAKSIQTASEAETPPENQVSKNKAAD 478
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 397 PTTPKEPEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE---PEPTTLKEPEPTTPKEPEpttp 472
Cdd:PRK08691 479 NETDAPLSEVPSENPIQATPnDEAVETETFAHEAPAEPFYGYGFPDNDCPPEDGAeipPPDWEHAAPADTAGGGAD---- 554
|
170 180
....*....|....*....|.
gi 1907070847 473 KEPEPTTLKEPEptTPKEPEP 493
Cdd:PRK08691 555 EEAEAGGIGGNN--TPSAPPP 573
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
545-613 |
1.66e-04 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 42.86 E-value: 1.66e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070847 545 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEP 613
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
|
|
| PRK10819 |
PRK10819 |
transport protein TonB; Provisional |
539-649 |
1.70e-04 |
|
transport protein TonB; Provisional
Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 44.29 E-value: 1.70e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 539 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTtPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 618
Cdd:PRK10819 42 PAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEPEPEPIPEPP-KEAPVVIPKPEPKPKPKPKPKPKPVKKVEEQPKRE 120
|
90 100 110
....*....|....*....|....*....|.
gi 1907070847 619 PEPTTRKEPEPTTPKEPEPTTPKEPEPTTPK 649
Cdd:PRK10819 121 VKPVEPRPASPFENTAPARPTSSTATAAASK 151
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
523-621 |
1.72e-04 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 44.22 E-value: 1.72e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 523 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPK 601
Cdd:PRK11633 45 PKPGDRDEPDMMPAaTQALPTQPPEGAAEAVRAGDAAAP-SLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQ 123
|
90 100
....*....|....*....|
gi 1907070847 602 EPEPTTPKEPEPTTPKEPEP 621
Cdd:PRK11633 124 KVEAPPAPKPEPKPVVEEKA 143
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
459-538 |
1.78e-04 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 45.65 E-value: 1.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 459 PEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKE 538
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
|
| PHA03369 |
PHA03369 |
capsid maturational protease; Provisional |
531-634 |
1.84e-04 |
|
capsid maturational protease; Provisional
Pssm-ID: 223061 [Multi-domain] Cd Length: 663 Bit Score: 45.38 E-value: 1.84e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 531 PEPTTPKEP--EPTTPKEPEP-TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEP-EPTTPKEPEPT 606
Cdd:PHA03369 354 TAPSRVLAAaaKVAVIAAPQThTGPADRQRPQRPDGIPYSVPARSPMTAYPPVPQFCGDPGLVSPYNPqSPGTSYGPEPV 433
|
90 100
....*....|....*....|....*...
gi 1907070847 607 TPKEPEPTTPKEPEPTTRKEPEPTTPKE 634
Cdd:PHA03369 434 GPVPPQPTNPYVMPISMANMVYPGHPQE 461
|
|
| PRK14949 |
PRK14949 |
DNA polymerase III subunits gamma and tau; Provisional |
400-555 |
1.89e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237863 [Multi-domain] Cd Length: 944 Bit Score: 45.49 E-value: 1.89e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 400 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE--PTTLKEPEPTTPKEPEPTTPKEPEP 477
Cdd:PRK14949 637 KKSSADRKPKTPPSRAPPASLSKPASSPDASQTSASFDLDPDFELATHQSVPEaaLASGSAPAPPPVPDPYDRPPWEEAP 716
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907070847 478 TTlkEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPesttrkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 555
Cdd:PRK14949 717 EV--ASANDGPNNAAEGNLSESVEDASNSELQAVEQQA------THQPQVQAEAQSPASTTALTQTSSEVQDTELNLV 786
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
469-564 |
2.05e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 45.19 E-value: 2.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 469 PTTPKEPEPTTLKEPEPTTPK--EPEPTTLKEPEPTTPKEPEPTTTKEPESTtrkePEPTTPkePEPTTPKEPEPTTPKE 546
Cdd:PRK14950 362 PVPAPQPAKPTAAAPSPVRPTpaPSTRPKAAAAANIPPKEPVRETATPPPVP----PRPVAP--PVPHTPESAPKLTRAA 435
|
90
....*....|....*....
gi 1907070847 547 -PEPTTPKEPEPTTPKEPE 564
Cdd:PRK14950 436 iPVDEKPKYTPPAPPKEEE 454
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
529-597 |
2.17e-04 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 42.47 E-value: 2.17e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070847 529 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEP 597
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
469-568 |
2.30e-04 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 43.84 E-value: 2.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 469 PTTPK---EPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEP--EPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTT 543
Cdd:PRK11633 42 PLVPKpgdRDEPDMMPAATQALPTQPPEGAAEAVRAGDAAAPslDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKP 121
|
90 100
....*....|....*....|....*
gi 1907070847 544 PKEPEPttPKEPEPTTPKEPEPTTP 568
Cdd:PRK11633 122 QQKVEA--PPAPKPEPKPVVEEKAA 144
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
501-689 |
2.40e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 45.25 E-value: 2.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 501 PTTPKEPEPTTTKEPESTTRKEPEPTTPkepEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 580
Cdd:PRK12323 375 ATAAAAPVAQPAPAAAAPAAAAPAPAAP---PAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPA 451
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 581 PTTPKKPEPTTPKEPEPttpkePEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKT 660
Cdd:PRK12323 452 PAPAAAPAAAARPAAAG-----PRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESI 526
|
170 180
....*....|....*....|....*....
gi 1907070847 661 TTLKATTLAPKVTAPAEEIQNKPEETTPA 689
Cdd:PRK12323 527 PDPATADPDDAFETLAPAPAAAPAPRAAA 555
|
|
| TonB |
COG0810 |
Periplasmic protein TonB, links inner and outer membranes [Cell wall/membrane/envelope ... |
404-546 |
2.52e-04 |
|
Periplasmic protein TonB, links inner and outer membranes [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 223880 [Multi-domain] Cd Length: 244 Bit Score: 44.01 E-value: 2.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 404 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTtlkePEPTTPKEPEPTTPKePEPTTLKEP 483
Cdd:COG0810 35 ELVPLAVFLLAAKVLEAPTEEPQPEPEPPEEQPKPPTEPETPPEPTPPKPK----EKPKPEKKPKKPKPK-PKPKPKPKP 109
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907070847 484 EPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKE 546
Cdd:COG0810 110 KVKPQPKPKKPPSKTAAKAPAAPNQPARPPSAASASGAATGPSASYLSGLRRAIRRAPRYPAQ 172
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
317-543 |
2.55e-04 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 436069 [Multi-domain] Cd Length: 480 Bit Score: 44.91 E-value: 2.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 317 STTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 396
Cdd:pfam17823 174 SSAPATLTPASGISTAATATGHPAAGTALAAVGNSSPAAGTVTAAVGTVTPAALATLAAAAGTVASAAGTINTGDPHARR 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 397 PTTPKE-PEPTTPKEPEPTTPKEPEPTTPK----EPEPTTPKEPEPT-TPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPT 470
Cdd:pfam17823 254 LSPAKHmPSDTSARNPAAPSGAQAQGLIIQvstdQPVHNTAGEPTPSpSNTTLEPNTPKSVASTNLAVVTTTKAQAKEPS 333
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907070847 471 TPKEPEPTTLKEPE-----PTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTT 543
Cdd:pfam17823 334 ASPVPVLHTSMIPEveatsPTTQPSPLLPTQGAAGPGILLAPDQVATDATAGTASAGPTPRSSGDPKMLAMASCQLST 411
|
|
| TonB |
COG0810 |
Periplasmic protein TonB, links inner and outer membranes [Cell wall/membrane/envelope ... |
319-466 |
2.61e-04 |
|
Periplasmic protein TonB, links inner and outer membranes [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 223880 [Multi-domain] Cd Length: 244 Bit Score: 44.01 E-value: 2.61e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 319 TRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK-EPEP 397
Cdd:COG0810 24 VFLHQEDFVGIELVPLAVFLLAAKVLEAPTEEPQPEPEPPEEQPKPPTEPETPPEPTPPKPKEKPKPEKKPKKPKpKPKP 103
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070847 398 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKE 466
Cdd:COG0810 104 KPKPKPKVKPQPKPKKPPSKTAAKAPAAPNQPARPPSAASASGAATGPSASYLSGLRRAIRRAPRYPAQ 172
|
|
| PRK13042 |
PRK13042 |
superantigen-like protein SSL4; Reviewed; |
550-633 |
2.63e-04 |
|
superantigen-like protein SSL4; Reviewed;
Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 44.24 E-value: 2.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 550 TTPKEPEPTTPKEPEPTTPKEPEPTT-PKEPEPttpkKPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKepEPTTRKEP 627
Cdd:PRK13042 23 TTTQAANATTPSSTKVEAPQSTPPSTkVEAPQS----KPNATTPPSTKVEAPQQtPNATTPSSTKVETPQ--SPTTKQVP 96
|
....*.
gi 1907070847 628 EPTTPK 633
Cdd:PRK13042 97 TEINPK 102
|
|
| PHA03379 |
PHA03379 |
EBNA-3A; Provisional |
328-571 |
2.74e-04 |
|
EBNA-3A; Provisional
Pssm-ID: 223066 [Multi-domain] Cd Length: 935 Bit Score: 45.05 E-value: 2.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 328 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 407
Cdd:PHA03379 408 ASEPTYGTPRPPVEKPRPEVPQSLETATSHGSAQVPEPPPVHDLEPGPLHDQHSMAPCPVAQLPPGPLQDLEPGDQLPGV 487
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 408 PKEPEPTTPKEPEPTTPKepepTTPKEPEPTTPKEPEPtTPKEPEPTTLK-EPEPTTPKEpEPTTPKEPEPTTLKEPEPT 486
Cdd:PHA03379 488 VQDGRPACAPVPAPAGPI----VRPWEASLSQVPGVAF-APVMPQPMPVEpVPVPTVALE-RPVCPAPPLIAMQGPGETS 561
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 487 TPKEPEPTTLKEP-EPTTPKEPEPTTTKEPESTTRKEPEP-TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 564
Cdd:PHA03379 562 GIVRVRERWRPAPwTPNPPRSPSQMSVRDRLARLRAEAQPyQASVEVQPPQLTQVSPQQPMEYPLEPEQQMFPGSPFSQV 641
|
....*..
gi 1907070847 565 PTTPKEP 571
Cdd:PHA03379 642 ADVMRAG 648
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
497-565 |
2.95e-04 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 42.09 E-value: 2.95e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070847 497 KEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 565
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
|
|
| TonB |
COG0810 |
Periplasmic protein TonB, links inner and outer membranes [Cell wall/membrane/envelope ... |
460-602 |
3.07e-04 |
|
Periplasmic protein TonB, links inner and outer membranes [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 223880 [Multi-domain] Cd Length: 244 Bit Score: 43.62 E-value: 3.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 460 EPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPEsttrKEPEPTTPKePEPTTPKEP 539
Cdd:COG0810 35 ELVPLAVFLLAAKVLEAPTEEPQPEPEPPEEQPKPPTEPETPPEPTPPKPKEKPKPE----KKPKKPKPK-PKPKPKPKP 109
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907070847 540 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKE 602
Cdd:COG0810 110 KVKPQPKPKKPPSKTAAKAPAAPNQPARPPSAASASGAATGPSASYLSGLRRAIRRAPRYPAQ 172
|
|
| PHA03264 |
PHA03264 |
envelope glycoprotein D; Provisional |
374-479 |
3.35e-04 |
|
envelope glycoprotein D; Provisional
Pssm-ID: 223029 [Multi-domain] Cd Length: 416 Bit Score: 44.23 E-value: 3.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 374 TTPKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 453
Cdd:PHA03264 253 VVPPYFEESKGYEPPPA-PSGGSPAPPGDDRPEAKPEPGPVEDGAPGRETGGEGEGPEPAGRDGAAGGEPKPGPPRPAPD 331
|
90 100
....*....|....*....|....*..
gi 1907070847 454 TTLKEPEPTTPKEP-EPTTPKEPEPTT 479
Cdd:PHA03264 332 ADRPEGWPSLEAITfPPPTPATPAVPR 358
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
489-557 |
3.44e-04 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 41.70 E-value: 3.44e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070847 489 KEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 557
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
|
|
| dnaA |
PRK14086 |
chromosomal replication initiator protein DnaA; |
376-598 |
3.65e-04 |
|
chromosomal replication initiator protein DnaA;
Pssm-ID: 237605 [Multi-domain] Cd Length: 617 Bit Score: 44.43 E-value: 3.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 376 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPkepePTTPKEPEPttpkePEPTT 455
Cdd:PRK14086 87 TVDPSAGEPAPPPPHARRTSEPELPRPGRRPYEGYGGPRADDRPPGLPRQDQLPTAR----PAYPAYQQR-----PEPGA 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 456 LKEPEPTTPKEPEPTTPKEPEPttlkepePTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRkePEPTTPKEPEPTT 535
Cdd:PRK14086 158 WPRAADDYGWQQQRLGFPPRAP-------YASPASYAPEQERDREPYDAGRPEYDQRRRDYDHPR--PDWDRPRRDRTDR 228
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907070847 536 PkEPEPTTPKEPEPTTPKEPEPTTPKEPEptTPKEPEPtTPKEPEPtTPKKPEPTTPKEPEPT 598
Cdd:PRK14086 229 P-EPPPGAGHVHRGGPGPPERDDAPVVPI--RPSAPGP-LAAQPAP-APGPGEPTARLNPKYT 286
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
441-521 |
3.72e-04 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 41.70 E-value: 3.72e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 441 KEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPttlkEPEPTTPKEPEPTTTKEPESTTR 520
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP----EPEPEPEPEPEPEPEPEPGAATL 116
|
.
gi 1907070847 521 K 521
Cdd:pfam05887 117 K 117
|
|
| TonB |
COG0810 |
Periplasmic protein TonB, links inner and outer membranes [Cell wall/membrane/envelope ... |
508-648 |
3.75e-04 |
|
Periplasmic protein TonB, links inner and outer membranes [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 223880 [Multi-domain] Cd Length: 244 Bit Score: 43.24 E-value: 3.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 508 EPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPttpkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKP 587
Cdd:COG0810 35 ELVPLAVFLLAAKVLEAPTEEPQPEPEPPEEQPKPPTEPETP-----PEPTPPKPKEKPKPEKKPKKPKPKPKPKPKPKP 109
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070847 588 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTP 648
Cdd:COG0810 110 KVKPQPKPKKPPSKTAAKAPAAPNQPARPPSAASASGAATGPSASYLSGLRRAIRRAPRYP 170
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
318-373 |
3.75e-04 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 41.70 E-value: 3.75e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070847 318 TTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEP 373
Cdd:pfam05887 54 TNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
|
|
| PspC_subgroup_1 |
NF033838 |
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
353-625 |
3.88e-04 |
|
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 411407 [Multi-domain] Cd Length: 684 Bit Score: 44.62 E-value: 3.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 353 KEPEPTTLKEPEptTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE-------PEPTTPKEPEpTTPKEPEPTTPK 425
Cdd:NF033838 216 KKAEATRLEKIK--TDREKAEEEAKRRADAKLKEAVEKNVATSEQDKPKRrakrgvlGEPATPDKKE-NDAKSSDSSVGE 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 426 EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPE----PT-TPKEPE------PTTPKEPEPTTLKEpEPTTPKEPEPt 494
Cdd:NF033838 293 ETLPSPSLKPEKKVAEAEKKVEEAKKKAKDQKEEDrrnyPTnTYKTLEleiaesDVKVKEAELELVKE-EAKEPRNEEK- 370
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 495 tLKEP-EPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEpEPTTPKEPEPTtpkePEPTTPKePEPTTPKEpep 573
Cdd:NF033838 371 -IKQAkAKVESKKAEATRLEKIKTDRKKAEEEAKRKAAEEDKVKE-KPAEQPQPAPA----PQPEKPA-PKPEKPAE--- 440
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 1907070847 574 tTPKEPEPTTPKKPEPTTPKEPEpttpkEPEPTTPKEPePTTPKEPEPTTRK 625
Cdd:NF033838 441 -QPKAEKPADQQAEEDYARRSEE-----EYNRLTQQQP-PKTEKPAQPSTPK 485
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
317-477 |
3.90e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 44.46 E-value: 3.90e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 317 STTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP---- 392
Cdd:PRK07003 438 RGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPaaas 517
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 393 KEPEPTTPKEPEPTTPkEPEPTTPKEP--------------------------EPTTPKEPEPTTPKEPEPTTPKEPEPT 446
Cdd:PRK07003 518 REDAPAAAAPPAPEAR-PPTPAAAAPAaraggaaaaldvlrnagmrvssdrgaRAAAAAKPAAAPAAAPKPAAPRVAVQV 596
|
170 180 190
....*....|....*....|....*....|..
gi 1907070847 447 -TPKEPEPTTLKEPEPTTPKEPEPTTPKEPEP 477
Cdd:PRK07003 597 pTPRARAATGDAPPNGAARAEQAAESRGAPPP 628
|
|
| PRK10819 |
PRK10819 |
transport protein TonB; Provisional |
547-650 |
4.08e-04 |
|
transport protein TonB; Provisional
Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 43.13 E-value: 4.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 547 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKE 626
Cdd:PRK10819 42 PAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEPEPEPIPEPP-KEAPVVIPKPEPKPKPKPKPKPKPVKKVEEQPKRE 120
|
90 100
....*....|....*....|....
gi 1907070847 627 PEPTTPKEPEPTTPKEPEPTTPKK 650
Cdd:PRK10819 121 VKPVEPRPASPFENTAPARPTSST 144
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
322-504 |
4.20e-04 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 44.15 E-value: 4.20e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 322 EPEPTTPKEPEPTTPKEPE-----------------------PTTPKEPEPTTPKEPEPTTL----KEPEPTTPKEPEPT 374
Cdd:PLN03209 340 KPVPTKPVTPEAPSPPIEEeppqpkavvprplspytayedlkPPTSPIPTPPSSSPASSKSVdavaKPAEPDVVPSPGSA 419
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 375 T---PKEPEPTTPKEPEPTTP--KEPEPTTPKEPEPTTPKEPEPTT------PKEPEPTTPKEPEPTTPKEPEPTTPKEP 443
Cdd:PLN03209 420 SnvpEVEPAQVEAKKTRPLSPyaRYEDLKPPTSPSPTAPTGVSPSVsstssvPAVPDTAPATAATDAAAPPPANMRPLSP 499
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070847 444 EPTTPKEPEPTTlkePEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTP 504
Cdd:PLN03209 500 YAVYDDLKPPTS---PSPAAPVGKVAPSSTNEVVKVGNSAPPTALADEQHHAQPKPRPLSP 557
|
|
| PRK13108 |
PRK13108 |
prolipoprotein diacylglyceryl transferase; Reviewed |
376-528 |
4.43e-04 |
|
prolipoprotein diacylglyceryl transferase; Reviewed
Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 44.20 E-value: 4.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 376 PKEPEPTT-PKEPEPTTPKEPEPTTPKEP-EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP--KEP 451
Cdd:PRK13108 295 ALEREPAElAAAAVASAASAVGPVGPGEPnQPDDVAEAVKAEVAEVTDEVAAESVVQVADRDGESTPAVEETSEAdiERE 374
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070847 452 EPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPtTPKEPEPTTTKEPesttrkEPEPTTP 528
Cdd:PRK13108 375 QPGDLAGQAPAAHQVDAEAASAAPEEPAALASEAHDETEPEVPEKAAPIP-DPAKPDELAVAGP------GDDPAEP 444
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
435-552 |
4.44e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 44.32 E-value: 4.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 435 PEPTTPKEPEPTTP-KEPEPTTlkePEPTTPKEPEPT-TPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTT 512
Cdd:PRK14951 376 AEKKTPARPEAAAPaAAPVAQA---AAAPAPAAAPAAaASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPP 452
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1907070847 513 KEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 552
Cdd:PRK14951 453 AQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
445-672 |
4.47e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 44.54 E-value: 4.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 445 PTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTT-PKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEP 523
Cdd:PHA03247 255 PAPPPVVGEGADRAPETARGATGPPPPPEAAAPNGAAAPPDGVwGAALAGAPLALPAPPDPPPPAPAGDAEEEDDEDGAM 334
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 524 EPTTPKepepTTPKEPEPTT-PKEPEPTTpkepepTTPKEPEPTTPKEPEPttPKEPEPTTPKKPEPTTpKEPEPTTPKE 602
Cdd:PHA03247 335 EVVSPL----PRPRQHYPLGfPKRRRPTW------TPPSSLEDLSAGRHHP--KRASLPTRKRRSARHA-ATPFARGPGG 401
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907070847 603 PEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPT-TPKEPE-PTTPKKPEPTTTSPKTTTLKATTLAPKV 672
Cdd:PHA03247 402 DDQTRPAAPVPASVPTPAPTPVPASAPPPPATPLPSaEPGSDDgPAPPPERQPPAPATEPAPDDPDDATRKA 473
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
265-645 |
4.50e-04 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 44.31 E-value: 4.50e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 265 PKEPEPTTPKEPPPTTKKPEPTTPKEPEPTTPKEPEPTTTKEPEPTTTKEPESTTRKEPEPTtpkePEPTTPKEPEPTTP 344
Cdd:PRK10263 374 APAPEGYPQQSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYA----PAPEQPVAGNAWQA 449
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 345 KEPEPttPKEPEPTTLKE---PEPTTPKEPE-PTTPKEPEPTTPKEP--EPTTPKEPEPTTPKEPEPTTPKEPEPTTP-K 417
Cdd:PRK10263 450 EEQQS--TFAPQSTYQTEqtyQQPAAQEPLYqQPQPVEQQPVVEPEPvvEETKPARPPLYYFEEVEEKRAREREQLAAwY 527
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 418 EPEPTTPKEPEPTTPKEPEPTTPKEP--EPTTPKEPEPTTLKEPEPTT--------------------PKEPEPTTPKEP 475
Cdd:PRK10263 528 QPIPEPVKEPEPIKSSLKAPSVAAVPpvEAAAAVSPLASGVKKATLATgaaatvaapvfslansggprPQVKEGIGPQLP 607
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 476 EPTTLKEPeptTPKEPEPTTLKEPEPTTPKE------------------------------------------------- 506
Cdd:PRK10263 608 RPKRIRVP---TRRELASYGIKLPSQRAAEEkareaqrnqydsgdqynddeidamqqdelarqfaqtqqqrygeqyqhdv 684
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 507 ----------PEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP--EPTTPKEPEPTTPKEPEPT 574
Cdd:PRK10263 685 pvnaedadaaAEAELARQFAQTQQQRYSGEQPAGANPFSLDDFEFSPMKALLDDGPHEPlfTPIVEPVQQPQQPVAPQQQ 764
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070847 575 TPKEPEPTTP----KKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEP--EPTTPKEPEP 645
Cdd:PRK10263 765 YQQPQQPVAPqpqyQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQyqQPQQPVAPQP 841
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
368-472 |
4.52e-04 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 43.07 E-value: 4.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 368 PKEPEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPT 446
Cdd:PRK11633 42 PLVPKPGDRDEPDMMPAaTQALPTQPPEGAAEAVRAGDAAAP-SLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPK 120
|
90 100
....*....|....*....|....*.
gi 1907070847 447 TPKEPEPTtlKEPEPTTPKEPEPTTP 472
Cdd:PRK11633 121 PQQKVEAP--PAPKPEPKPVVEEKAA 144
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
485-601 |
4.60e-04 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 43.07 E-value: 4.60e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 485 PTTPK---EPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPttpkepepttpkepEPTTPK 561
Cdd:PRK11633 42 PLVPKpgdRDEPDMMPAATQALPTQPPEGAAEAVRAGDAAAPSLDPATVAPPNTPVEPEP--------------APVEPP 107
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1907070847 562 EPEPTTPKEPEPTTPKEPEPTTPKKPEPtTPKEPEPTTPK 601
Cdd:PRK11633 108 KPKPVEKPKPKPKPQQKVEAPPAPKPEP-KPVVEEKAAPT 146
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
322-434 |
4.63e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 44.09 E-value: 4.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 322 EPEPTTPKEPEPTTP--KEPEPTTPKEPEPTTPKEPEPTTlKEPEPTTPKEPEPTTPKEPepttPKEPEPTTPKEPEPTT 399
Cdd:PRK07994 414 PLPETTSQLLAARQQlqRAQGATKAKKSEPAAASRARPVN-SALERLASVRPAPSALEKA----PAKKEAYRWKATNPVE 488
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907070847 400 PKEPEPTTPKEPEP--TTPKEPEPTTPKEPEPTTPKE 434
Cdd:PRK07994 489 VKKEPVATPKALKKalEHEKTPELAAKLAAEAIERDP 525
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
544-648 |
4.69e-04 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 42.68 E-value: 4.69e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 544 PKEPEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTPKKpEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPT 622
Cdd:PRK11633 42 PLVPKPGDRDEPDMMPAaTQALPTQPPEGAAEAVRAGDAAAPSL-DPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPK 120
|
90 100
....*....|....*....|....*.
gi 1907070847 623 TRKEPEPttPKEPEPTTPKEPEPTTP 648
Cdd:PRK11633 121 PQQKVEA--PPAPKPEPKPVVEEKAA 144
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
481-549 |
4.77e-04 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 41.32 E-value: 4.77e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070847 481 KEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 549
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
586-650 |
5.05e-04 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 44.11 E-value: 5.05e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1907070847 586 KPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKK 650
Cdd:PRK12270 37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPA 101
|
|
| DUF4045 |
pfam13254 |
Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. ... |
321-469 |
5.06e-04 |
|
Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. This domain family is found in bacteria and eukaryotes, and is typically between 384 and 430 amino acids in length.
Pssm-ID: 433066 [Multi-domain] Cd Length: 415 Bit Score: 43.62 E-value: 5.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 321 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP-------TTLKEPEPTTPKEPEPTTPKEPEP---TTPKEPEPT 390
Cdd:pfam13254 201 KEVTPVGLMRSPAPGGHSKSPSVSGISADSSPTKEEPseeadtlSTDKEQSPAPTSASEPPPKTKELPkdsEEPAAPSKS 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 391 TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPEPTTLK--EPEPTTPKEPE 468
Cdd:pfam13254 281 AEASTEKKEPDTESSPETSSEKSAPSLLSPVSKASIDKPLSSPDRDPLSPK-PKPQSPPKDFRANLRsrEVPKDKSKKDE 359
|
.
gi 1907070847 469 P 469
Cdd:pfam13254 360 P 360
|
|
| TonB |
COG0810 |
Periplasmic protein TonB, links inner and outer membranes [Cell wall/membrane/envelope ... |
359-506 |
5.37e-04 |
|
Periplasmic protein TonB, links inner and outer membranes [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 223880 [Multi-domain] Cd Length: 244 Bit Score: 42.85 E-value: 5.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 359 TLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK-EPEP 437
Cdd:COG0810 24 VFLHQEDFVGIELVPLAVFLLAAKVLEAPTEEPQPEPEPPEEQPKPPTEPETPPEPTPPKPKEKPKPEKKPKKPKpKPKP 103
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070847 438 TTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKE 506
Cdd:COG0810 104 KPKPKPKVKPQPKPKKPPSKTAAKAPAAPNQPARPPSAASASGAATGPSASYLSGLRRAIRRAPRYPAQ 172
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
547-648 |
5.45e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 43.93 E-value: 5.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 547 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPkePEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP--KEPEPTT 623
Cdd:PRK14951 376 AEKKTPARPEAAAPaAAPVAQAAAAPAPAAA--PAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAvaLAPAPPA 453
|
90 100
....*....|....*....|....*...
gi 1907070847 624 RKEPEPTTPK---EPEPTTPKEPEPTTP 648
Cdd:PRK14951 454 QAAPETVAIPvrvAPEPAVASAAPAPAA 481
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
376-477 |
5.52e-04 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 42.68 E-value: 5.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 376 PKEPEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPT 454
Cdd:PRK11633 42 PLVPKPGDRDEPDMMPAaTQALPTQPPEGAAEAVRAGDAAAP-SLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPK 120
|
90 100
....*....|....*....|...
gi 1907070847 455 TLKEPEPTTPKEPEPTTPKEPEP 477
Cdd:PRK11633 121 PQQKVEAPPAPKPEPKPVVEEKA 143
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
516-691 |
5.54e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 44.10 E-value: 5.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 516 ESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEP 595
Cdd:PRK12323 371 GAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAP 450
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 596 EPTTPKEPEPTTP---KEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKV 672
Cdd:PRK12323 451 APAPAAAPAAAARpaaAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPA 530
|
170
....*....|....*....
gi 1907070847 673 TAPAEEIQNKPEETTPASE 691
Cdd:PRK12323 531 TADPDDAFETLAPAPAAAP 549
|
|
| PRK10819 |
PRK10819 |
transport protein TonB; Provisional |
403-518 |
5.64e-04 |
|
transport protein TonB; Provisional
Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 42.75 E-value: 5.64e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 403 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTtPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKE 482
Cdd:PRK10819 42 PAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEPEPEPIPEPP-KEAPVVIPKPEPKPKPKPKPKPKPVKKVEEQPKRE 120
|
90 100 110
....*....|....*....|....*....|....*.
gi 1907070847 483 PEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPEST 518
Cdd:PRK10819 121 VKPVEPRPASPFENTAPARPTSSTATAAASKPVTSV 156
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
478-538 |
5.68e-04 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 43.35 E-value: 5.68e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070847 478 TTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKE 538
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
393-461 |
5.72e-04 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 41.32 E-value: 5.72e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070847 393 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEP 461
Cdd:pfam05887 43 KGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 111
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
536-641 |
5.94e-04 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 42.68 E-value: 5.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 536 PKEPEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPT 614
Cdd:PRK11633 42 PLVPKPGDRDEPDMMPAaTQALPTQPPEGAAEAVRAGDAAAP-SLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPK 120
|
90 100
....*....|....*....|....*..
gi 1907070847 615 TPKEPEPTTRKEPEPtTPKEPEPTTPK 641
Cdd:PRK11633 121 PQQKVEAPPAPKPEP-KPVVEEKAAPT 146
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
344-448 |
5.99e-04 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 42.68 E-value: 5.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 344 PKEPEPTTPKEPEPT-TLKEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPT 422
Cdd:PRK11633 42 PLVPKPGDRDEPDMMpAATQALPTQPPEGAAEAVRAGDAAAP-SLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPK 120
|
90 100
....*....|....*....|....*.
gi 1907070847 423 TPKEPEPttPKEPEPTTPKEPEPTTP 448
Cdd:PRK11633 121 PQQKVEA--PPAPKPEPKPVVEEKAA 144
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
335-477 |
6.00e-04 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 43.92 E-value: 6.00e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 335 TPKEP--EPTTPKEPEPTTPKEPEPTTLKEPEPTTPkepePTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 412
Cdd:PRK10263 739 GPHEPlfTPIVEPVQQPQQPVAPQQQYQQPQQPVAP----QPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQ 814
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907070847 413 PTTPKEPEPTTPkEPEPTTPKEPEPTTPKEP--EPTTPKEPEPTTLKEPEPTTPKEPEPTT-PKEPEP 477
Cdd:PRK10263 815 PQYQQPQQPVAP-QPQYQQPQQPVAPQPQDTllHPLLMRNGDSRPLHKPTTPLPSLDLLTPpPSEVEP 881
|
|
| PHA03264 |
PHA03264 |
envelope glycoprotein D; Provisional |
326-431 |
6.03e-04 |
|
envelope glycoprotein D; Provisional
Pssm-ID: 223029 [Multi-domain] Cd Length: 416 Bit Score: 43.46 E-value: 6.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 326 TTPKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 405
Cdd:PHA03264 253 VVPPYFEESKGYEPPPA-PSGGSPAPPGDDRPEAKPEPGPVEDGAPGRETGGEGEGPEPAGRDGAAGGEPKPGPPRPAPD 331
|
90 100
....*....|....*....|....*..
gi 1907070847 406 TTPKEPEPTTPKEP-EPTTPKEPEPTT 431
Cdd:PHA03264 332 ADRPEGWPSLEAITfPPPTPATPAVPR 358
|
|
| dnaA |
PRK14086 |
chromosomal replication initiator protein DnaA; |
458-646 |
6.03e-04 |
|
chromosomal replication initiator protein DnaA;
Pssm-ID: 237605 [Multi-domain] Cd Length: 617 Bit Score: 43.66 E-value: 6.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 458 EPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKE-PESTTRKEPEPtTPKEPEPTTP 536
Cdd:PRK14086 89 DPSAGEPAPPPPHARRTSEPELPRPGRRPYEGYGGPRADDRPPGLPRQDQLPTARPAyPAYQQRPEPGA-WPRAADDYGW 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 537 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpkKPEPTTPKEPEPTTPkEPEPTTPKEPE---- 612
Cdd:PRK14086 168 QQQRLGFPPRAPYASPASYAPEQERDREPYDAGRPEYDQRRRDYDHP--RPDWDRPRRDRTDRP-EPPPGAGHVHRggpg 244
|
170 180 190
....*....|....*....|....*....|....*
gi 1907070847 613 -PTTPKEPEPTTRKEPEPTTPKEPEPtTPKEPEPT 646
Cdd:PRK14086 245 pPERDDAPVVPIRPSAPGPLAAQPAP-APGPGEPT 278
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
427-548 |
6.41e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 43.55 E-value: 6.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 427 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTlkePEPT-TPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTP 504
Cdd:PRK14951 376 AEKKTPARPEAAAPaAAPVAQAAAAPAPAA---APAAaASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPP 452
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 1907070847 505 KEPEPTTTKEPestTRKEPEPTTPKEPEPTTPKEPEPTTPKEPE 548
Cdd:PRK14951 453 AQAAPETVAIP---VRVAPEPAVASAAPAPAAAPAAARLTPTEE 493
|
|
| PRK14949 |
PRK14949 |
DNA polymerase III subunits gamma and tau; Provisional |
416-571 |
6.53e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237863 [Multi-domain] Cd Length: 944 Bit Score: 43.95 E-value: 6.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 416 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPE--PTTPKEPEPTTLKEPEPTTPKEPEP 493
Cdd:PRK14949 637 KKSSADRKPKTPPSRAPPASLSKPASSPDASQTSASFDLDPDFELATHQSVPEaaLASGSAPAPPPVPDPYDRPPWEEAP 716
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907070847 494 TTlkEPEPTTPKEPEPTTTKEPESTTRKEPEPTTpkEPEPTtpkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 571
Cdd:PRK14949 717 EV--ASANDGPNNAAEGNLSESVEDASNSELQAV--EQQAT----HQPQVQAEAQSPASTTALTQTSSEVQDTELNLV 786
|
|
| PRK10819 |
PRK10819 |
transport protein TonB; Provisional |
419-541 |
6.64e-04 |
|
transport protein TonB; Provisional
Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 42.75 E-value: 6.64e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 419 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPttlkEPEPTT---PKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTT 495
Cdd:PRK10819 42 PAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEP----EPEPIPeppKEAPVVIPKPEPKPKPKPKPKPKPVKKVEEQP 117
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1907070847 496 LKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKePEPTTPKEPEP 541
Cdd:PRK10819 118 KREVKPVEPRPASPFENTAPARPTSSTATAAASK-PVTSVSSGPRA 162
|
|
| PRK13042 |
PRK13042 |
superantigen-like protein SSL4; Reviewed; |
517-601 |
6.73e-04 |
|
superantigen-like protein SSL4; Reviewed;
Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 43.08 E-value: 6.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 517 STTRKEPEPTTPKEPEPTTPKEPEPTT-PKEPEPTtpkePEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKkpEPTTPKE 594
Cdd:PRK13042 22 TTTTQAANATTPSSTKVEAPQSTPPSTkVEAPQSK----PNATTPPSTKVEAPQQtPNATTPSSTKVETPQ--SPTTKQV 95
|
....*..
gi 1907070847 595 PEPTTPK 601
Cdd:PRK13042 96 PTEINPK 102
|
|
| PRK13108 |
PRK13108 |
prolipoprotein diacylglyceryl transferase; Reviewed |
504-645 |
6.93e-04 |
|
prolipoprotein diacylglyceryl transferase; Reviewed
Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 43.43 E-value: 6.93e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 504 PKEPEPTT-TKEPESTTRKEPEPTTPKEP-EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPEP 581
Cdd:PRK13108 295 ALEREPAElAAAAVASAASAVGPVGPGEPnQPDDVAEAVKAEVAEVTDEVAAESVVQVADRDGESTPA-VEETSEADIER 373
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070847 582 TTPKKPEPTTPKEPEPTTPKEPE-PTTPKEPEPTTPKEPEPTTRKEPEPTT-PKEPEPTTPKEPEP 645
Cdd:PRK13108 374 EQPGDLAGQAPAAHQVDAEAASAaPEEPAALASEAHDETEPEVPEKAAPIPdPAKPDELAVAGPGD 439
|
|
| PRK10819 |
PRK10819 |
transport protein TonB; Provisional |
477-613 |
6.94e-04 |
|
transport protein TonB; Provisional
Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 42.36 E-value: 6.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 477 PTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESttrkEPEPTTpkEPEPTTPKePEPTTPKEPEPTTPKEPE 556
Cdd:PRK10819 36 HQVIELPAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEP----EPEPIP--EPPKEAPV-VIPKPEPKPKPKPKPKPK 108
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070847 557 PTTPKEPEPTtpKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKePEPTTPKEPEP 613
Cdd:PRK10819 109 PVKKVEEQPK--REVKPVEPRPASPFENTAPARPTSSTATAAASK-PVTSVSSGPRA 162
|
|
| Trypan_PARP |
pfam05887 |
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei ... |
457-525 |
7.13e-04 |
|
Procyclic acidic repetitive protein (PARP); This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated.
Pssm-ID: 368653 Cd Length: 134 Bit Score: 40.93 E-value: 7.13e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070847 457 KEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEP 525
Cdd:pfam05887 41 KGKGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 109
|
|
| PRK13042 |
PRK13042 |
superantigen-like protein SSL4; Reviewed; |
366-449 |
7.41e-04 |
|
superantigen-like protein SSL4; Reviewed;
Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 42.70 E-value: 7.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 366 TTPKEPEPTTPKEPEPTTPKEPEPTT-PKEPEPTtpkePEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKepEPTTPKEP 443
Cdd:PRK13042 23 TTTQAANATTPSSTKVEAPQSTPPSTkVEAPQSK----PNATTPPSTKVEAPQQtPNATTPSSTKVETPQ--SPTTKQVP 96
|
....*.
gi 1907070847 444 EPTTPK 449
Cdd:PRK13042 97 TEINPK 102
|
|
| PHA03264 |
PHA03264 |
envelope glycoprotein D; Provisional |
526-635 |
7.42e-04 |
|
envelope glycoprotein D; Provisional
Pssm-ID: 223029 [Multi-domain] Cd Length: 416 Bit Score: 43.07 E-value: 7.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 526 TTPKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEP 605
Cdd:PHA03264 253 VVPPYFEESKGYEPPPA-PSGGSPAPPGDDRPEAKPEPGPVEDGAPGRETGGEGEGPEPAGRDGAAGGEPKPGPPRPAPD 331
|
90 100 110
....*....|....*....|....*....|
gi 1907070847 606 TTPKEPEPTTPKEPEPTtrkePEPTTPKEP 635
Cdd:PHA03264 332 ADRPEGWPSLEAITFPP----PTPATPAVP 357
|
|
| PHA03169 |
PHA03169 |
hypothetical protein; Provisional |
337-545 |
7.50e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 43.04 E-value: 7.50e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 337 KEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPttpKEPEPTTP 416
Cdd:PHA03169 44 AKPAPPAPTTSGPQVRAVAEQGHRQTESDTETAEESRHGEKEERGQGGPSGSGSESVGSPTPSPSGSAE---ELASGLSP 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 417 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTL 496
Cdd:PHA03169 121 ENTSGSSPESPASHSPPPSPPSHPGPHEPAPPESHNPSPNQQPSSFLQPSHEDSPEEPEPPTSEPEPDSPGPPQSETPTS 200
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1907070847 497 KEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPK 545
Cdd:PHA03169 201 SPPPQSPPDEPGEPQSPTPQQAPSPNTQQAVEHEDEPTEPEREGPPFPG 249
|
|
| PRK13042 |
PRK13042 |
superantigen-like protein SSL4; Reviewed; |
526-609 |
7.55e-04 |
|
superantigen-like protein SSL4; Reviewed;
Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 42.70 E-value: 7.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 526 TTPKEPEPTTPKEPEPTTPKEPEPTT-PKEPEPTtpkePEPTTPKEPEPTTPKE-PEPTTPKKPEPTTPKepEPTTPKEP 603
Cdd:PRK13042 23 TTTQAANATTPSSTKVEAPQSTPPSTkVEAPQSK----PNATTPPSTKVEAPQQtPNATTPSSTKVETPQ--SPTTKQVP 96
|
....*.
gi 1907070847 604 EPTTPK 609
Cdd:PRK13042 97 TEINPK 102
|
|
| PTZ00108 |
PTZ00108 |
DNA topoisomerase 2-like protein; Provisional |
434-650 |
7.61e-04 |
|
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 43.88 E-value: 7.61e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 434 EPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPePTTPKEPEPTTLKEPEPTTPKEPEPTTTK 513
Cdd:PTZ00108 1149 EKEIAKEQRLKSKTKGKASKLRKPKLKKKEKKKKKSSADKSKKASVVGNS-KRVDSDEKRKLDDKPDNKKSNSSGSDQED 1227
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 514 EPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpkepepTTPKKPEPTTPK 593
Cdd:PTZ00108 1228 DEEQKTKPKKSSVKRLKSKKNNSSKSSEDNDEFSSDDLSKEGKPKNAPKRVSAVQYSPPPPS------KRPDGESNGGSK 1301
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 1907070847 594 EPEPTTPKEPEPTTPKEPEPTTPKEPEPTT-RKEPEPTTPKEPEPTTPKEPEPTTPKK 650
Cdd:PTZ00108 1302 PSSPTKKKVKKRLEGSLAALKKKKKSEKKTaRKKKSKTRVKQASASQSSRLLRRPRKK 1359
|
|
| PRK13042 |
PRK13042 |
superantigen-like protein SSL4; Reviewed; |
358-441 |
7.68e-04 |
|
superantigen-like protein SSL4; Reviewed;
Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 42.70 E-value: 7.68e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 358 TTLKEPEPTTPKEPEPTTPKEPEPTT-PKEPEPTtpkePEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKepEPTTPKEP 435
Cdd:PRK13042 23 TTTQAANATTPSSTKVEAPQSTPPSTkVEAPQSK----PNATTPPSTKVEAPQQtPNATTPSSTKVETPQ--SPTTKQVP 96
|
....*.
gi 1907070847 436 EPTTPK 441
Cdd:PRK13042 97 TEINPK 102
|
|
| PRK13042 |
PRK13042 |
superantigen-like protein SSL4; Reviewed; |
510-593 |
7.75e-04 |
|
superantigen-like protein SSL4; Reviewed;
Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 42.70 E-value: 7.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 510 TTTKEPESTTRKEPEPTTPKEPEPTT-PKEPEPTtpkePEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKepEPTTPKKP 587
Cdd:PRK13042 23 TTTQAANATTPSSTKVEAPQSTPPSTkVEAPQSK----PNATTPPSTKVEAPQQtPNATTPSSTKVETPQ--SPTTKQVP 96
|
....*.
gi 1907070847 588 EPTTPK 593
Cdd:PRK13042 97 TEINPK 102
|
|
| PRK12757 |
PRK12757 |
cell division protein FtsN; Provisional |
492-572 |
7.86e-04 |
|
cell division protein FtsN; Provisional
Pssm-ID: 237191 [Multi-domain] Cd Length: 256 Bit Score: 42.34 E-value: 7.86e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 492 EPTTLKE-PE-PTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 569
Cdd:PRK12757 98 QPTQLSEvPYnEQTPQVPRSTVQIQQQAQQQQPPATTAQPQPVTPPRQTTAPVQPQTPAPVRTQPAAPVTQAVEAPKVEA 177
|
...
gi 1907070847 570 EPE 572
Cdd:PRK12757 178 EKE 180
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
510-570 |
7.89e-04 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 42.96 E-value: 7.89e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070847 510 TTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 570
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
411-531 |
7.93e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 43.55 E-value: 7.93e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 411 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPkePEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPK 489
Cdd:PRK14951 376 AEKKTPARPEAAAPaAAPVAQAAAAPAPAAA--PAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPA 453
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 1907070847 490 EPEPTTLKEPEPTTPkEPePTTTKEPESTTRKEPEPTTPKEP 531
Cdd:PRK14951 454 QAAPETVAIPVRVAP-EP-AVASAAPAPAAAPAAARLTPTEE 493
|
|
| PRK13108 |
PRK13108 |
prolipoprotein diacylglyceryl transferase; Reviewed |
325-452 |
8.02e-04 |
|
prolipoprotein diacylglyceryl transferase; Reviewed
Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 43.04 E-value: 8.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 325 PTTPKEPEPTTpkEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTP----KEPEPTTPKEPE-PTTPKEPEPTT 399
Cdd:PRK13108 320 PGEPNQPDDVA--EAVKAEVAEVTDEVAAESVVQVADRDGESTPAVEETSEAdierEQPGDLAGQAPAaHQVDAEAASAA 397
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 1907070847 400 PKEPEPTTPKEPEPTTPKEPEPTTPKepepTTPKEPEPTTPKEPEPtTPKEPE 452
Cdd:PRK13108 398 PEEPAALASEAHDETEPEVPEKAAPI----PDPAKPDELAVAGPGD-DPAEPD 445
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
451-568 |
8.14e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 43.55 E-value: 8.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 451 PEPTTLKEPEPTTP-KEPEPTTPKEPEPTTlkePEPT-TPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTP 528
Cdd:PRK14951 376 AEKKTPARPEAAAPaAAPVAQAAAAPAPAA---APAAaASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPP 452
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1907070847 529 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 568
Cdd:PRK14951 453 AQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
485-697 |
8.30e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 43.62 E-value: 8.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 485 PTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 564
Cdd:PHA03307 25 PATPGDAADDLLSGSQGQLVSDSAELAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREG 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 565 pttpkEPEPTTPkEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPE 644
Cdd:PHA03307 105 -----SPTPPGP-SSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSS 178
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 1907070847 645 PTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTPASEDSDDSK 697
Cdd:PHA03307 179 PEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADD 231
|
|
| PRK10819 |
PRK10819 |
transport protein TonB; Provisional |
368-488 |
8.31e-04 |
|
transport protein TonB; Provisional
Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 42.36 E-value: 8.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 368 PKEPEPTTPKEPEPTTPKEPEpttpKEPEPttpkEPEPTTPKE-PEPTTPKEPEPTTPKEPEPTTPKEPEP---TTPKEP 443
Cdd:PRK10819 55 PADLEPPQAVQPPPEPVVEPE----PEPEP----IPEPPKEAPvVIPKPEPKPKPKPKPKPKPVKKVEEQPkreVKPVEP 126
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1907070847 444 EPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTP 488
Cdd:PRK10819 127 RPASPFENTAPARPTSSTATAAASKPVTSVSSGPRALSRNQPQYP 171
|
|
| PRK14960 |
PRK14960 |
DNA polymerase III subunit gamma/tau; |
421-603 |
8.63e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237868 [Multi-domain] Cd Length: 702 Bit Score: 43.50 E-value: 8.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 421 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPttlkEPEPTTPKEPEPTTLKEPE 500
Cdd:PRK14960 360 PLAPNEILVSEPVQQNGQAEVGLNSQAQTAQEITPVSAVQPVEVISQPAMVEPEPEP----EPEPEPEPEPEPEPEPEPE 435
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 501 PTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPKEP 579
Cdd:PRK14960 436 PEPEPEPQPNQDLMVFDPNHHELIGLESAVVQETVSVLEEDFIPVPEQKLVQVQAETQVKQiEPEPASTAEPIGLFEASS 515
|
170 180
....*....|....*....|....
gi 1907070847 580 EPTTPKKPEPTTPKEPEPTTPKEP 603
Cdd:PRK14960 516 AEFSLAQDTSAYDLVSEPVIEQQS 539
|
|
| PRK14960 |
PRK14960 |
DNA polymerase III subunit gamma/tau; |
352-475 |
8.70e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237868 [Multi-domain] Cd Length: 702 Bit Score: 43.50 E-value: 8.70e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 352 PKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPT------TPKEPEPTTPKEP--EPTTPKEPEPTTPKEPEPTT 423
Cdd:PRK14960 407 PAMVEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPQPNqdlmvfDPNHHELIGLESAvvQETVSVLEEDFIPVPEQKLV 486
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 1907070847 424 PKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEP 475
Cdd:PRK14960 487 QVQAETQVKQiEPEPASTAEPIGLFEASSAEFSLAQDTSAYDLVSEPVIEQQS 539
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
408-511 |
8.86e-04 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 41.91 E-value: 8.86e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 408 PKEPEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKEPEPTTPkEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPT 486
Cdd:PRK11633 42 PLVPKPGDRDEPDMMPAaTQALPTQPPEGAAEAVRAGDAAAP-SLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPK 120
|
90 100
....*....|....*....|....*
gi 1907070847 487 TPKEPEPTtlKEPEPTTPKEPEPTT 511
Cdd:PRK11633 121 PQQKVEAP--PAPKPEPKPVVEEKA 143
|
|
| PTZ00108 |
PTZ00108 |
DNA topoisomerase 2-like protein; Provisional |
378-605 |
8.93e-04 |
|
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 43.50 E-value: 8.93e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 378 EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLK 457
Cdd:PTZ00108 1149 EKEIAKEQRLKSKTKGKASKLRKPKLKKKEKKKKKSSADKSKKASV-VGNSKRVDSDEKRKLDDKPDNKKSNSSGSDQED 1227
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 458 EPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPE--STTRKEPEPTTPKEPEPTT 535
Cdd:PTZ00108 1228 DEEQKTKPKKSSVKRLKSKKNNSSKSSEDNDEFSSDDLSKEGKPKNAPKRVSAVQYSPPppSKRPDGESNGGSKPSSPTK 1307
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070847 536 PKEPEPTTPKEPEPTTPKEPEPTT-PKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEP 605
Cdd:PTZ00108 1308 KKVKKRLEGSLAALKKKKKSEKKTaRKKKSKTRVKQASASQSSRLLRRPRKKKSDSSSEDDDDSEVDDSED 1378
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
443-516 |
9.29e-04 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 43.34 E-value: 9.29e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907070847 443 PEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPE 516
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAA 111
|
|
| PRK10905 |
PRK10905 |
cell division protein DamX; Validated |
534-649 |
9.47e-04 |
|
cell division protein DamX; Validated
Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 42.62 E-value: 9.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 534 TTPKEPEPTTPKEPEPTTPKEPEPTTP------KEPEPTTPKEPEPTTPKEPEPTT---PKKPEPTTPKEPEPT--TPKE 602
Cdd:PRK10905 106 TQPQNQQQLNNVAVNSTLPTEPATVAPvrngnaSRQTAKTQTAERPATTRPARKQAviePKKPQATAKTEPKPVaqTPKR 185
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 1907070847 603 PEPTTPKEPepttPKEPEPTTRKEPEPTTPKEPEPT-TPKEPEPTTPK 649
Cdd:PRK10905 186 TEPAAPVAS----TKAPAATSTPAPKETATTAPVQTaSPAQTTATPAA 229
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
558-630 |
9.47e-04 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 42.75 E-value: 9.47e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907070847 558 TTPKEPEPTTPKEPEPTTPK-EPEPTTPKKPEPTTPKEPEPTTPKEPEPTtpkEPEPTTPKEPEPTTRKEPEPT 630
Cdd:PTZ00144 120 TGGAPPAAAPAAAAAAKAEKtTPEKPKAAAPTPEPPAASKPTPPAAAKPP---EPAPAAKPPPTPVARADPRET 190
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
319-386 |
9.47e-04 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 42.96 E-value: 9.47e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907070847 319 TRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKE 386
Cdd:TIGR00601 75 SKPKTGTGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
451-530 |
1.05e-03 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 43.34 E-value: 1.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 451 PEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKE 530
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
419-540 |
1.05e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 43.16 E-value: 1.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 419 PEPTTPKEPEPTTP-KEPEPTTPKepePTTPKEPEPTTLKEP-EPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTtl 496
Cdd:PRK14951 376 AEKKTPARPEAAAPaAAPVAQAAA---APAPAAAPAAAASAPaAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPA-- 450
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 1907070847 497 kEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPE 540
Cdd:PRK14951 451 -PPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEE 493
|
|
| ZipA |
COG3115 |
Cell division protein ZipA, interacts with FtsZ [Cell cycle control, cell division, chromosome ... |
374-497 |
1.09e-03 |
|
Cell division protein ZipA, interacts with FtsZ [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 225657 [Multi-domain] Cd Length: 324 Bit Score: 42.55 E-value: 1.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 374 TTPKEPEPTTPKEPEPTTPKEPE--PTTPKEPEPTTPKEPEPTTPKEPEPttPKEPEPTTPKEPEPttPKEPEPTTPkEP 451
Cdd:COG3115 68 RKNEAPQFTQEHEAARQSPQHQYqpEYASAQIKIPVPQPPQISDPPAHPQ--PTQPALDQEQPPEE--ARQPVLPQE-AP 142
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1907070847 452 EPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLK 497
Cdd:COG3115 143 APQPVHSAAPQPAVQTVQPAVPEQQVQPEEVVEPAPEVKRPPRKDT 188
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
319-432 |
1.10e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 42.78 E-value: 1.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 319 TRKEPEPTTP---KEPEPTTPKEPEPTTPKEPEPTTPkepePTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 395
Cdd:PRK14951 380 TPARPEAAAPaaaPVAQAAAAPAPAAAPAAAASAPAA----PPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQA 455
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907070847 396 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 432
Cdd:PRK14951 456 APETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
511-578 |
1.14e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 42.57 E-value: 1.14e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907070847 511 TTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 578
Cdd:TIGR00601 75 SKPKTGTGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
583-648 |
1.17e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 42.57 E-value: 1.17e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070847 583 TPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTP 648
Cdd:TIGR00601 75 SKPKTGTGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVP 140
|
|
| PTZ00108 |
PTZ00108 |
DNA topoisomerase 2-like protein; Provisional |
458-697 |
1.19e-03 |
|
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 43.11 E-value: 1.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 458 EPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPK 537
Cdd:PTZ00108 1149 EKEIAKEQRLKSKTKGKASKLRKPKLKKKEKKKKKSSADKSKKASVVGNSKRVDSDEKRKLDDKPDNKKSNSSGSDQEDD 1228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 538 EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEpepTTPKEPEPTTPKKPEPTTPKEPEPTTPKepepTTPKEPEPTTPK 617
Cdd:PTZ00108 1229 EEQKTKPKKSSVKRLKSKKNNSSKSSEDNDEFS---SDDLSKEGKPKNAPKRVSAVQYSPPPPS----KRPDGESNGGSK 1301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 618 EPEPTTRKEPEPTTPKEPEPTTPKEPEPTTP--KKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQN-KPEET--TPASED 692
Cdd:PTZ00108 1302 PSSPTKKKVKKRLEGSLAALKKKKKSEKKTArkKKSKTRVKQASASQSSRLLRRPRKKKSDSSSEDdDDSEVddSEDEDD 1381
|
....*
gi 1907070847 693 SDDSK 697
Cdd:PTZ00108 1382 EDDED 1386
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
519-584 |
1.23e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 42.57 E-value: 1.23e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070847 519 TRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 584
Cdd:TIGR00601 75 SKPKTGTGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVP 140
|
|
| ZipA |
COG3115 |
Cell division protein ZipA, interacts with FtsZ [Cell cycle control, cell division, chromosome ... |
351-503 |
1.24e-03 |
|
Cell division protein ZipA, interacts with FtsZ [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 225657 [Multi-domain] Cd Length: 324 Bit Score: 42.16 E-value: 1.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 351 TPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPEPTTPKEPE--PTTPKEPEPTTPKEPEPTTPKEPE 428
Cdd:COG3115 38 RPLKRMKSKRDDDPYDEVADDEGVGEVRVVRKNEA-PQFTQEHEAARQSPQHQYqpEYASAQIKIPVPQPPQISDPPAHP 116
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1907070847 429 PttPKEPEPTTPKEPEPttPKEPePTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTT 503
Cdd:COG3115 117 Q--PTQPALDQEQPPEE--ARQP-VLPQEAPAPQPVHSAAPQPAVQTVQPAVPEQQVQPEEVVEPAPEVKRPPRK 186
|
|
| PHA03369 |
PHA03369 |
capsid maturational protease; Provisional |
455-570 |
1.25e-03 |
|
capsid maturational protease; Provisional
Pssm-ID: 223061 [Multi-domain] Cd Length: 663 Bit Score: 42.68 E-value: 1.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 455 TLKEPEPTTPKEPEPTTPKEPEPTTlkepePTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEP-EP 533
Cdd:PHA03369 350 TASLTAPSRVLAAAAKVAVIAAPQT-----HTGPADRQRPQRPDGIPYSVPARSPMTAYPPVPQFCGDPGLVSPYNPqSP 424
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907070847 534 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 570
Cdd:PHA03369 425 GTSYGPEPVGPVPPQPTNPYVMPISMANMVYPGHPQE 461
|
|
| PRK14960 |
PRK14960 |
DNA polymerase III subunit gamma/tau; |
488-627 |
1.27e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237868 [Multi-domain] Cd Length: 702 Bit Score: 42.73 E-value: 1.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 488 PKEPEPTTLKEP-EPTTPKEP--EPTTTKEPESTTRKEPEPTT----PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 560
Cdd:PRK14960 360 PLAPNEILVSEPvQQNGQAEVglNSQAQTAQEITPVSAVQPVEvisqPAMVEPEPEPEPEPEPEPEPEPEPEPEPEPEPE 439
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907070847 561 KEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK-EPEPTTRKEP 627
Cdd:PRK14960 440 PEPQPNQDLMVFDPNHHELIGLESAVVQETVSVLEEDFIPVPEQKLVQVQAETQVKQiEPEPASTAEP 507
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
555-627 |
1.42e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 42.36 E-value: 1.42e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907070847 555 PEPTTPKEPEPTTPKePEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEP 627
Cdd:PTZ00144 122 GAPPAAAPAAAAAAK-AEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRETRVP 193
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
475-558 |
1.72e-03 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 42.57 E-value: 1.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 475 PEPTTLKEPEPTTPKEPEPTTlkEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPtTPKE 554
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAP--AAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAA-AAVE 114
|
....
gi 1907070847 555 PEPT 558
Cdd:PRK12270 115 DEVT 118
|
|
| ZipA |
COG3115 |
Cell division protein ZipA, interacts with FtsZ [Cell cycle control, cell division, chromosome ... |
334-457 |
1.88e-03 |
|
Cell division protein ZipA, interacts with FtsZ [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 225657 [Multi-domain] Cd Length: 324 Bit Score: 41.78 E-value: 1.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 334 TTPKEPEPTTPKEPEPTTPKEPE--PTTLKEPEPTTPKEPEPTTPKEPEPttPKEPEPTTPKEPEPttPKEPEPTTPkEP 411
Cdd:COG3115 68 RKNEAPQFTQEHEAARQSPQHQYqpEYASAQIKIPVPQPPQISDPPAHPQ--PTQPALDQEQPPEE--ARQPVLPQE-AP 142
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1907070847 412 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLK 457
Cdd:COG3115 143 APQPVHSAAPQPAVQTVQPAVPEQQVQPEEVVEPAPEVKRPPRKDT 188
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
502-562 |
1.94e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 41.80 E-value: 1.94e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070847 502 TTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 562
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
358-418 |
2.00e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 41.80 E-value: 2.00e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070847 358 TTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 418
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
534-594 |
2.07e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 41.80 E-value: 2.07e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070847 534 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKE 594
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
390-450 |
2.08e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 41.80 E-value: 2.08e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070847 390 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 450
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
382-442 |
2.08e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 41.80 E-value: 2.08e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070847 382 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 442
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
374-434 |
2.08e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 41.80 E-value: 2.08e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070847 374 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 434
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
366-426 |
2.08e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 41.80 E-value: 2.08e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070847 366 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 426
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| PRK13335 |
PRK13335 |
superantigen-like protein SSL3; Reviewed; |
514-617 |
2.19e-03 |
|
superantigen-like protein SSL3; Reviewed;
Pssm-ID: 139494 [Multi-domain] Cd Length: 356 Bit Score: 41.65 E-value: 2.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 514 EPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEpEPTTPKEPEPTTPKEPEPTTpkEPEPTTPKePEPTTPkkPEPTTPK 593
Cdd:PRK13335 69 RQERTPKLEKAPNTNEEKTSASKIEKISQPKQE-EQKSLNISATPAPKQEQSQT--TTESTTPK-TKVTTP--PSTNTPQ 142
|
90 100
....*....|....*....|....*
gi 1907070847 594 EPEPTTPKEPE-PTTPKEPEPTTPK 617
Cdd:PRK13335 143 PMQSTKSDTPQsPTIKQAQTDMTPK 167
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
322-420 |
2.21e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 42.01 E-value: 2.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 322 EPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 400
Cdd:PRK14951 394 VAQAAAAPAPAAAPAAAaSAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQAAPETVAIPVRVAPEPAVA 473
|
90 100
....*....|....*....|
gi 1907070847 401 KEPEPTTPKEPEPTTPKEPE 420
Cdd:PRK14951 474 SAAPAPAAAPAAARLTPTEE 493
|
|
| PRK10905 |
PRK10905 |
cell division protein DamX; Validated |
366-473 |
2.43e-03 |
|
cell division protein DamX; Validated
Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 41.46 E-value: 2.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 366 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT-PKEPEPTTPKEPEPT--TPKEPEPTTPKEPepttPKE 442
Cdd:PRK10905 122 TLPTEPATVAPVRNGNASRQTAKTQTAERPATTRPARKQAVIePKKPQATAKTEPKPVaqTPKRTEPAAPVAS----TKA 197
|
90 100 110
....*....|....*....|....*....|..
gi 1907070847 443 PEPTTPKEPEPTTLKEPEPT-TPKEPEPTTPK 473
Cdd:PRK10905 198 PAATSTPAPKETATTAPVQTaSPAQTTATPAA 229
|
|
| ZipA |
COG3115 |
Cell division protein ZipA, interacts with FtsZ [Cell cycle control, cell division, chromosome ... |
518-647 |
2.62e-03 |
|
Cell division protein ZipA, interacts with FtsZ [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 225657 [Multi-domain] Cd Length: 324 Bit Score: 41.39 E-value: 2.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 518 TTRKEPEPTTPKEPEPTTPKEPE--PTTPKEPEPTTPKEPEPTTPKEPEPttPKEPEPTTPKEPEPttPKKPepttpkeP 595
Cdd:COG3115 68 RKNEAPQFTQEHEAARQSPQHQYqpEYASAQIKIPVPQPPQISDPPAHPQ--PTQPALDQEQPPEE--ARQP-------V 136
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 1907070847 596 EPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTT 647
Cdd:COG3115 137 LPQEAPAPQPVHSAAPQPAVQTVQPAVPEQQVQPEEVVEPAPEVKRPPRKDT 188
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
342-402 |
2.73e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 41.42 E-value: 2.73e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070847 342 TTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 402
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
350-410 |
2.77e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 41.42 E-value: 2.77e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070847 350 TTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 410
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| TonB |
COG0810 |
Periplasmic protein TonB, links inner and outer membranes [Cell wall/membrane/envelope ... |
463-610 |
2.92e-03 |
|
Periplasmic protein TonB, links inner and outer membranes [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 223880 [Multi-domain] Cd Length: 244 Bit Score: 40.54 E-value: 2.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 463 TPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPK-EPEP 541
Cdd:COG0810 24 VFLHQEDFVGIELVPLAVFLLAAKVLEAPTEEPQPEPEPPEEQPKPPTEPETPPEPTPPKPKEKPKPEKKPKKPKpKPKP 103
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907070847 542 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKE 610
Cdd:COG0810 104 KPKPKPKVKPQPKPKKPPSKTAAKAPAAPNQPARPPSAASASGAATGPSASYLSGLRRAIRRAPRYPAQ 172
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
531-603 |
2.93e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 41.21 E-value: 2.93e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907070847 531 PEPTTPKEPEPTTPKePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEP 603
Cdd:PTZ00144 122 GAPPAAAPAAAAAAK-AEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRETRVP 193
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
334-394 |
2.97e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 41.03 E-value: 2.97e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070847 334 TTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 394
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
382-450 |
3.04e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 41.21 E-value: 3.04e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 382 TTPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 450
Cdd:PTZ00144 120 TGGAPPAAAPAAAAAAKAEKtTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRE 189
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
366-434 |
3.04e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 41.21 E-value: 3.04e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 366 TTPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 434
Cdd:PTZ00144 120 TGGAPPAAAPAAAAAAKAEKtTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRE 189
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
374-442 |
3.04e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 41.21 E-value: 3.04e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 374 TTPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 442
Cdd:PTZ00144 120 TGGAPPAAAPAAAAAAKAEKtTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRE 189
|
|
| PRK12757 |
PRK12757 |
cell division protein FtsN; Provisional |
356-436 |
3.09e-03 |
|
cell division protein FtsN; Provisional
Pssm-ID: 237191 [Multi-domain] Cd Length: 256 Bit Score: 40.80 E-value: 3.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 356 EPTTLKE-PE-PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 433
Cdd:PRK12757 98 QPTQLSEvPYnEQTPQVPRSTVQIQQQAQQQQPPATTAQPQPVTPPRQTTAPVQPQTPAPVRTQPAAPVTQAVEAPKVEA 177
|
...
gi 1907070847 434 EPE 436
Cdd:PRK12757 178 EKE 180
|
|
| PRK13335 |
PRK13335 |
superantigen-like protein SSL3; Reviewed; |
447-545 |
3.10e-03 |
|
superantigen-like protein SSL3; Reviewed;
Pssm-ID: 139494 [Multi-domain] Cd Length: 356 Bit Score: 41.27 E-value: 3.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 447 TPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTlkEPEPTTPKepePTTTKEPESTTRKEPEPT 526
Cdd:PRK13335 73 TPKLEKAPNTNEEKTSASKIEKISQPKQEEQKSLNISATPAPKQEQSQT--TTESTTPK---TKVTTPPSTNTPQPMQST 147
|
90 100
....*....|....*....|
gi 1907070847 527 TPKEPE-PTTPKEPEPTTPK 545
Cdd:PRK13335 148 KSDTPQsPTIKQAQTDMTPK 167
|
|
| PRK12757 |
PRK12757 |
cell division protein FtsN; Provisional |
567-636 |
3.12e-03 |
|
cell division protein FtsN; Provisional
Pssm-ID: 237191 [Multi-domain] Cd Length: 256 Bit Score: 40.80 E-value: 3.12e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 567 TPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPE 636
Cdd:PRK12757 111 TPQVPRSTVQIQQQAQQQQPPATTAQPQPVTPPRQTTAPVQPQTPAPVRTQPAAPVTQAVEAPKVEAEKE 180
|
|
| PRK10905 |
PRK10905 |
cell division protein DamX; Validated |
366-488 |
3.30e-03 |
|
cell division protein DamX; Validated
Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 41.08 E-value: 3.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 366 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT-PKEPEPTTPKEPEPT--TPKE 442
Cdd:PRK10905 106 TQPQNQQQLNNVAVNSTLPTEPATVAPVRNGNASRQTAKTQTAERPATTRPARKQAVIePKKPQATAKTEPKPVaqTPKR 185
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1907070847 443 PEPTTPKEPEPTtlkePEPTTPKEPEPTTPKEPEPTTLKEPEPTTP 488
Cdd:PRK10905 186 TEPAAPVASTKA----PAATSTPAPKETATTAPVQTASPAQTTATP 227
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
525-690 |
3.31e-03 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 41.56 E-value: 3.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 525 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpkEPEPTTPKEPEPTTPkkPEPTTPKEPEPTTPKEPE 604
Cdd:PRK10811 846 PVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVV--EAVAEVVEEPVVVAE--PQPEEVVVVETTHPEVIA 921
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 605 PTTPKEPEPTTPKE---PEPTTRkEPEPTTPKEPEPTTPKEPEPTT---PKKPEPTTTSPKTTTLKATTLAPKVTAPAEE 678
Cdd:PRK10811 922 APVTEQPQVITESDvavAQEVAE-HAEPVVEPQDETADIEEAAETAevvVAEPEVVAQPAAPVVAEVAAEVETVTAVEPE 1000
|
170
....*....|..
gi 1907070847 679 IQNKPEETTPAS 690
Cdd:PRK10811 1001 VAPAQVPEATVE 1012
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
375-452 |
3.31e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 227665 [Multi-domain] Cd Length: 931 Bit Score: 41.35 E-value: 3.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 375 TPKEPEPTTPKEPEPTT--PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 452
Cdd:COG5373 45 GPVAKAAEQMAAPEAAEaaPLPAAAESIASPEVPPPVPPAPAQEGEAPAAEQPSAVPAPSAAPAPAEPVEPSLAANPFAA 124
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
367-444 |
3.31e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 227665 [Multi-domain] Cd Length: 931 Bit Score: 41.35 E-value: 3.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 367 TPKEPEPTTPKEPEPTT--PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 444
Cdd:COG5373 45 GPVAKAAEQMAAPEAAEaaPLPAAAESIASPEVPPPVPPAPAQEGEAPAAEQPSAVPAPSAAPAPAEPVEPSLAANPFAA 124
|
|
| ZipA |
COG3115 |
Cell division protein ZipA, interacts with FtsZ [Cell cycle control, cell division, chromosome ... |
390-519 |
3.37e-03 |
|
Cell division protein ZipA, interacts with FtsZ [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 225657 [Multi-domain] Cd Length: 324 Bit Score: 41.01 E-value: 3.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 390 TTPKEPEPTTPKEPEPTTPKEPE--PTTPKEPEPTTPKEPEPTTPKEPEPttPKEPEPTTPKEPEPttLKEPepttpkeP 467
Cdd:COG3115 68 RKNEAPQFTQEHEAARQSPQHQYqpEYASAQIKIPVPQPPQISDPPAHPQ--PTQPALDQEQPPEE--ARQP-------V 136
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 1907070847 468 EPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTT 519
Cdd:COG3115 137 LPQEAPAPQPVHSAAPQPAVQTVQPAVPEQQVQPEEVVEPAPEVKRPPRKDT 188
|
|
| ZipA |
COG3115 |
Cell division protein ZipA, interacts with FtsZ [Cell cycle control, cell division, chromosome ... |
318-439 |
3.43e-03 |
|
Cell division protein ZipA, interacts with FtsZ [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 225657 [Multi-domain] Cd Length: 324 Bit Score: 41.01 E-value: 3.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 318 TTRKEPEPTTPKEPEPTTPKEPE--PTTPKEPEPTTPKEPEPTTLKEPEPttPKEPEPTTPKEPEPTTpKEPEPTTPKEP 395
Cdd:COG3115 68 RKNEAPQFTQEHEAARQSPQHQYqpEYASAQIKIPVPQPPQISDPPAHPQ--PTQPALDQEQPPEEAR-QPVLPQEAPAP 144
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 1907070847 396 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 439
Cdd:COG3115 145 QPVHSAAPQPAVQTVQPAVPEQQVQPEEVVEPAPEVKRPPRKDT 188
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
395-467 |
3.46e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 41.21 E-value: 3.46e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907070847 395 PEPTTPKEPEPTTPKePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEP 467
Cdd:PTZ00144 122 GAPPAAAPAAAAAAK-AEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRETRVP 193
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
328-440 |
3.49e-03 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 40.37 E-value: 3.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 328 PKEPEPTTPKEPEPTTPKEPepTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPepttpkEPEPTTPKEPEPTT 407
Cdd:PRK11633 42 PLVPKPGDRDEPDMMPAATQ--ALPTQPPEGAAEAVRAGDAAAPSLDPATVAPPNTPVEP------EPAPVEPPKPKPVE 113
|
90 100 110
....*....|....*....|....*....|...
gi 1907070847 408 PKEPEPTTPKEPEPttPKEPEPTTPKEPEPTTP 440
Cdd:PRK11633 114 KPKPKPKPQQKVEA--PPAPKPEPKPVVEEKAA 144
|
|
| PRK13042 |
PRK13042 |
superantigen-like protein SSL4; Reviewed; |
534-617 |
3.50e-03 |
|
superantigen-like protein SSL4; Reviewed;
Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 40.77 E-value: 3.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 534 TTPKEPEPTTPKEPEPTTPKEPEPTTpkepEPTTPKE-PEPTTPKEPEPTTPK-KPEPTTPKEPEPTTPKepEPTTPKEP 611
Cdd:PRK13042 23 TTTQAANATTPSSTKVEAPQSTPPST----KVEAPQSkPNATTPPSTKVEAPQqTPNATTPSSTKVETPQ--SPTTKQVP 96
|
....*.
gi 1907070847 612 EPTTPK 617
Cdd:PRK13042 97 TEINPK 102
|
|
| TonB |
COG0810 |
Periplasmic protein TonB, links inner and outer membranes [Cell wall/membrane/envelope ... |
439-594 |
3.52e-03 |
|
Periplasmic protein TonB, links inner and outer membranes [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 223880 [Multi-domain] Cd Length: 244 Bit Score: 40.54 E-value: 3.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 439 TPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKepest 518
Cdd:COG0810 24 VFLHQEDFVGIELVPLAVFLLAAKVLEAPTEEPQPEPEPPEEQPKPPTEPETPPEPTPPKPKEKPKPEKKPKKPK----- 98
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070847 519 trKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKE 594
Cdd:COG0810 99 --PKPKPKPKPKPKVKPQPKPKKPPSKTAAKAPAAPNQPARPPSAASASGAATGPSASYLSGLRRAIRRAPRYPAQ 172
|
|
| PRK10905 |
PRK10905 |
cell division protein DamX; Validated |
390-518 |
3.54e-03 |
|
cell division protein DamX; Validated
Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 40.69 E-value: 3.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 390 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT-PKEPEPTTLKEPEPT--TPKE 466
Cdd:PRK10905 106 TQPQNQQQLNNVAVNSTLPTEPATVAPVRNGNASRQTAKTQTAERPATTRPARKQAVIePKKPQATAKTEPKPVaqTPKR 185
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 1907070847 467 PEPTTPKEPEPTtlkePEPTTPKEPEPTTLKEPEPT-TPKEPEPTTTKEPEST 518
Cdd:PRK10905 186 TEPAAPVASTKA----PAATSTPAPKETATTAPVQTaSPAQTTATPAAGGKTA 234
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
515-598 |
3.58e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 41.21 E-value: 3.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 515 PESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPepttPKEPEPTTPKEPEPTTPKEPEPTtpkEPEPTTPKKPEPTTPKE 594
Cdd:PTZ00144 114 PLSEIDTGGAPPAAAPAAAAAAKAEKTTPEKPK----AAAPTPEPPAASKPTPPAAAKPP---EPAPAAKPPPTPVARAD 186
|
....
gi 1907070847 595 PEPT 598
Cdd:PTZ00144 187 PRET 190
|
|
| PRK10819 |
PRK10819 |
transport protein TonB; Provisional |
371-495 |
3.59e-03 |
|
transport protein TonB; Provisional
Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 40.44 E-value: 3.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 371 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEpttpKEPEPttpkEPEPTTPKE-PEPTTPKEPEPTTPKEPEPTTPK 449
Cdd:PRK10819 42 PAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPE----PEPEP----IPEPPKEAPvVIPKPEPKPKPKPKPKPKPVKKV 113
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1907070847 450 EPEPTtlKEPEPTTPKEPEPTTPKEPEPTTlkePEPTTPKEPEPTT 495
Cdd:PRK10819 114 EEQPK--REVKPVEPRPASPFENTAPARPT---SSTATAAASKPVT 154
|
|
| PHA03264 |
PHA03264 |
envelope glycoprotein D; Provisional |
398-507 |
3.79e-03 |
|
envelope glycoprotein D; Provisional
Pssm-ID: 223029 [Multi-domain] Cd Length: 416 Bit Score: 41.14 E-value: 3.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 398 TTPKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEP 477
Cdd:PHA03264 253 VVPPYFEESKGYEPPPA-PSGGSPAPPGDDRPEAKPEPGPVEDGAPGRETGGEGEGPEPAGRDGAAGGEPKPGPPRPAPD 331
|
90 100 110
....*....|....*....|....*....|
gi 1907070847 478 TTLKEPEPTTPKEPEPTtlkePEPTTPKEP 507
Cdd:PHA03264 332 ADRPEGWPSLEAITFPP----PTPATPAVP 357
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
344-410 |
3.83e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 40.82 E-value: 3.83e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070847 344 PKEPEPTTPKEPEPTTlKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 410
Cdd:PTZ00144 124 PPAAAPAAAAAAKAEK-TTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRE 189
|
|
| PRK10905 |
PRK10905 |
cell division protein DamX; Validated |
398-537 |
3.83e-03 |
|
cell division protein DamX; Validated
Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 40.69 E-value: 3.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 398 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPepTTPKEPEPTTPKEPEPTTLKEPepttpKEPEPTTPKEPEP 477
Cdd:PRK10905 106 TQPQNQQQLNNVAVNSTLPTEPATVAPVRNGNASRQTA--KTQTAERPATTRPARKQAVIEP-----KKPQATAKTEPKP 178
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070847 478 TtlkepePTTPKEPEPTTlkepEPTTPKEPEPTTTKEPESTTRKEPEPT-TPKEPEPTTPK 537
Cdd:PRK10905 179 V------AQTPKRTEPAA----PVASTKAPAATSTPAPKETATTAPVQTaSPAQTTATPAA 229
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
494-554 |
3.89e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 40.65 E-value: 3.89e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070847 494 TTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 554
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
383-466 |
3.89e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 227665 [Multi-domain] Cd Length: 931 Bit Score: 41.35 E-value: 3.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 383 TPKEPEPTTPKEPEPTT--PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPeptTLKEPE 460
Cdd:COG5373 45 GPVAKAAEQMAAPEAAEaaPLPAAAESIASPEVPPPVPPAPAQEGEAPAAEQPSAVPAPSAAPAPAEPVEP---SLAANP 121
|
....*.
gi 1907070847 461 PTTPKE 466
Cdd:COG5373 122 FAAAIE 127
|
|
| PRK10819 |
PRK10819 |
transport protein TonB; Provisional |
563-671 |
3.93e-03 |
|
transport protein TonB; Provisional
Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 40.05 E-value: 3.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 563 PEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKE-PEPTTPKEPEPTTRKEPEPTTPKEPEPTTPK 641
Cdd:PRK10819 42 PAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPvVIPKPEPKPKPKPKPKPKPVKKVEEQPKREV 121
|
90 100 110
....*....|....*....|....*....|
gi 1907070847 642 EPEPTTPKKPEPTTTSPKTTTLKATTLAPK 671
Cdd:PRK10819 122 KPVEPRPASPFENTAPARPTSSTATAAASK 151
|
|
| PHA03264 |
PHA03264 |
envelope glycoprotein D; Provisional |
350-455 |
4.06e-03 |
|
envelope glycoprotein D; Provisional
Pssm-ID: 223029 [Multi-domain] Cd Length: 416 Bit Score: 40.76 E-value: 4.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 350 TTPKEPEPTTLKEPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP 429
Cdd:PHA03264 253 VVPPYFEESKGYEPPPA-PSGGSPAPPGDDRPEAKPEPGPVEDGAPGRETGGEGEGPEPAGRDGAAGGEPKPGPPRPAPD 331
|
90 100
....*....|....*....|....*..
gi 1907070847 430 TTPKEPEPTTPKEP-EPTTPKEPEPTT 455
Cdd:PHA03264 332 ADRPEGWPSLEAITfPPPTPATPAVPR 358
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
534-606 |
4.07e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 40.82 E-value: 4.07e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907070847 534 TTPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKkpePTTPKEPEPTTPKEPEPT 606
Cdd:PTZ00144 120 TGGAPPAAAPAAAAAAKAEKtTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPA---PAAKPPPTPVARADPRET 190
|
|
| PRK10905 |
PRK10905 |
cell division protein DamX; Validated |
326-441 |
4.07e-03 |
|
cell division protein DamX; Validated
Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 40.69 E-value: 4.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 326 TTPKEPEPTTP------KEPEPTTPKEPEPTTPKEPEPTTLKEPepttpKEPEPTTPKEPEPTtpkepePTTPKEPEPTT 399
Cdd:PRK10905 122 TLPTEPATVAPvrngnaSRQTAKTQTAERPATTRPARKQAVIEP-----KKPQATAKTEPKPV------AQTPKRTEPAA 190
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 1907070847 400 PKEPepttPKEPEPTTPKEPEPTTPKEPEPT-TPKEPEPTTPK 441
Cdd:PRK10905 191 PVAS----TKAPAATSTPAPKETATTAPVQTaSPAQTTATPAA 229
|
|
| PRK14949 |
PRK14949 |
DNA polymerase III subunits gamma and tau; Provisional |
516-693 |
4.11e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237863 [Multi-domain] Cd Length: 944 Bit Score: 41.25 E-value: 4.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 516 ESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTT--PK 593
Cdd:PRK14949 633 EGDGKKSSADRKPKTPPSRAPPASLSKPASSPDASQTSASFDLDPDFELATHQSVPEAALASGSAPAPPPVPDPYDrpPW 712
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 594 EPEPTTpkEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPkkpeptttspktttlkatTLAPKVT 673
Cdd:PRK14949 713 EEAPEV--ASANDGPNNAAEGNLSESVEDASNSELQAVEQQATHQPQVQAEAQSP------------------ASTTALT 772
|
170 180
....*....|....*....|
gi 1907070847 674 APAEEIQNKPEETTPASEDS 693
Cdd:PRK14949 773 QTSSEVQDTELNLVLLSSGS 792
|
|
| PRK01297 |
PRK01297 |
ATP-dependent RNA helicase RhlB; Provisional |
525-588 |
4.18e-03 |
|
ATP-dependent RNA helicase RhlB; Provisional
Pssm-ID: 234938 [Multi-domain] Cd Length: 475 Bit Score: 41.05 E-value: 4.18e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907070847 525 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPE 588
Cdd:PRK01297 13 EAEQPAPAPPSPAAAPAPPPPAKTAAPATKAAAPAAAAPRAEKPKKDKPRRERKPKPASLWKLE 76
|
|
| PRK01297 |
PRK01297 |
ATP-dependent RNA helicase RhlB; Provisional |
549-624 |
4.18e-03 |
|
ATP-dependent RNA helicase RhlB; Provisional
Pssm-ID: 234938 [Multi-domain] Cd Length: 475 Bit Score: 41.05 E-value: 4.18e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070847 549 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTR 624
Cdd:PRK01297 13 EAEQPAPAPPSPAAAPAPPPPAKTAAPATKAAAPAAAAPRAEKPKKDKPRRERKPKPASLWKLEDFVVEPQEGKTR 88
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
507-696 |
4.21e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 41.46 E-value: 4.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 507 PEPTTTKEPESTtrKEPEPTTPKEPEPTTPKEPEPTTPKEPEP---------TTPKEPEPTTPKEPEPTTPKEPEPTTPK 577
Cdd:PHA03247 255 PAPPPVVGEGAD--RAPETARGATGPPPPPEAAAPNGAAAPPDgvwgaalagAPLALPAPPDPPPPAPAGDAEEEDDEDG 332
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 578 EPEPTTP---------------KKPEPTTPKEPEPTTPKEPEP---TTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTT 639
Cdd:PHA03247 333 AMEVVSPlprprqhyplgfpkrRRPTWTPPSSLEDLSAGRHHPkraSLPTRKRRSARHAATPFARGPGGDDQTRPAAPVP 412
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070847 640 PKEPEPTTPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPEETTPASEDSDDS 696
Cdd:PHA03247 413 ASVPTPAPTPVPASAPPPPATPLPSAEPGSDDGPAPPPERQPPAPATEPAPDDPDDA 469
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
542-614 |
4.21e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 40.82 E-value: 4.21e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907070847 542 TTPKEPEPTTPKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPTTPKKPEPTtpkEPEPTTPKEPEPTTPKEPEPT 614
Cdd:PTZ00144 120 TGGAPPAAAPAAAAAAKAEKtTPEKPKAAAPTPEPPAASKPTPPAAAKPP---EPAPAAKPPPTPVARADPRET 190
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
551-634 |
4.50e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 227665 [Multi-domain] Cd Length: 931 Bit Score: 40.96 E-value: 4.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 551 TPKEPEPTTPKEPEPTT--PKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPeptTRKEPE 628
Cdd:COG5373 45 GPVAKAAEQMAAPEAAEaaPLPAAAESIASPEVPPPVPPAPAQEGEAPAAEQPSAVPAPSAAPAPAEPVEP---SLAANP 121
|
....*.
gi 1907070847 629 PTTPKE 634
Cdd:COG5373 122 FAAAIE 127
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
558-618 |
4.51e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 40.65 E-value: 4.51e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070847 558 TTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 618
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
550-610 |
4.55e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 40.65 E-value: 4.55e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070847 550 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKE 610
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
320-410 |
4.59e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 41.00 E-value: 4.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 320 RKEPEPTTPKEPEPTTPKEPEPTtPKEPEPTTPKEPEPTTL-KEPEPTTPKEPEPTTP---KEPEPTTPKEPEP--TTPK 393
Cdd:PRK07994 430 QRAQGATKAKKSEPAAASRARPV-NSALERLASVRPAPSALeKAPAKKEAYRWKATNPvevKKEPVATPKALKKalEHEK 508
|
90
....*....|....*..
gi 1907070847 394 EPEPTTPKEPEPTTPKE 410
Cdd:PRK07994 509 TPELAAKLAAEAIERDP 525
|
|
| PRK13335 |
PRK13335 |
superantigen-like protein SSL3; Reviewed; |
503-609 |
4.62e-03 |
|
superantigen-like protein SSL3; Reviewed;
Pssm-ID: 139494 [Multi-domain] Cd Length: 356 Bit Score: 40.49 E-value: 4.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 503 TPKEPEPTTTKEPESTTRKEpepTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpkEPEPTTPKePEPTTPkePEPT 582
Cdd:PRK13335 68 TRQERTPKLEKAPNTNEEKT---SASKIEKISQPKQEEQKSLNISATPAPKQEQSQT--TTESTTPK-TKVTTP--PSTN 139
|
90 100
....*....|....*....|....*...
gi 1907070847 583 TPKKPEPTTPKEPE-PTTPKEPEPTTPK 609
Cdd:PRK13335 140 TPQPMQSTKSDTPQsPTIKQAQTDMTPK 167
|
|
| PRK01297 |
PRK01297 |
ATP-dependent RNA helicase RhlB; Provisional |
533-596 |
4.68e-03 |
|
ATP-dependent RNA helicase RhlB; Provisional
Pssm-ID: 234938 [Multi-domain] Cd Length: 475 Bit Score: 40.67 E-value: 4.68e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907070847 533 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPE 596
Cdd:PRK01297 13 EAEQPAPAPPSPAAAPAPPPPAKTAAPATKAAAPAAAAPRAEKPKKDKPRRERKPKPASLWKLE 76
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
438-518 |
4.88e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 40.44 E-value: 4.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 438 TTPKEPEPTTPKEPEPttlkEPEPTTPKEPEPTTPKEPEPttlKEPEPTTPKEPEPTtlkEPEPTTPKEPEPTTTKEPES 517
Cdd:PTZ00144 120 TGGAPPAAAPAAAAAA----KAEKTTPEKPKAAAPTPEPP---AASKPTPPAAAKPP---EPAPAAKPPPTPVARADPRE 189
|
.
gi 1907070847 518 T 518
Cdd:PTZ00144 190 T 190
|
|
| PRK14960 |
PRK14960 |
DNA polymerase III subunit gamma/tau; |
557-637 |
4.94e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237868 [Multi-domain] Cd Length: 702 Bit Score: 40.80 E-value: 4.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 557 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTT----PKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTP 632
Cdd:PRK14960 360 PLAPNEILVSEPVQQNGQAEVGLNSQAQTAQEITPVSAVQPVEvisqPAMVEPEPEPEPEPEPEPEPEPEPEPEPEPEPE 439
|
....*
gi 1907070847 633 KEPEP 637
Cdd:PRK14960 440 PEPQP 444
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
542-602 |
4.96e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 40.65 E-value: 4.96e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070847 542 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKE 602
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
539-611 |
5.01e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 40.44 E-value: 5.01e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907070847 539 PEPTTPKEPEPTTPKePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEP 611
Cdd:PTZ00144 122 GAPPAAAPAAAAAAK-AEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRETRVP 193
|
|
| PRK13042 |
PRK13042 |
superantigen-like protein SSL4; Reviewed; |
334-425 |
5.12e-03 |
|
superantigen-like protein SSL4; Reviewed;
Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 40.00 E-value: 5.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 334 TTPKEPEPTTPKEPEPTTPKEPEPTTlkepeptTPKEPEPTtpkePEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKepE 412
Cdd:PRK13042 23 TTTQAANATTPSSTKVEAPQSTPPST-------KVEAPQSK----PNATTPPSTKVEAPQQtPNATTPSSTKVETPQ--S 89
|
90
....*....|...
gi 1907070847 413 PTTPKEPEPTTPK 425
Cdd:PRK13042 90 PTTKQVPTEINPK 102
|
|
| PRK01297 |
PRK01297 |
ATP-dependent RNA helicase RhlB; Provisional |
541-604 |
5.14e-03 |
|
ATP-dependent RNA helicase RhlB; Provisional
Pssm-ID: 234938 [Multi-domain] Cd Length: 475 Bit Score: 40.67 E-value: 5.14e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907070847 541 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPE 604
Cdd:PRK01297 13 EAEQPAPAPPSPAAAPAPPPPAKTAAPATKAAAPAAAAPRAEKPKKDKPRRERKPKPASLWKLE 76
|
|
| PRK10905 |
PRK10905 |
cell division protein DamX; Validated |
334-449 |
5.34e-03 |
|
cell division protein DamX; Validated
Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 40.31 E-value: 5.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 334 TTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTT-PKEPEPTTPKEPEPTtpkepePTTPKEPEPTTPKEPe 412
Cdd:PRK10905 122 TLPTEPATVAPVRNGNASRQTAKTQTAERPATTRPARKQAVIePKKPQATAKTEPKPV------AQTPKRTEPAAPVAS- 194
|
90 100 110
....*....|....*....|....*....|....*...
gi 1907070847 413 pttPKEPEPTTPKEPEPTTPKEPEPT-TPKEPEPTTPK 449
Cdd:PRK10905 195 ---TKAPAATSTPAPKETATTAPVQTaSPAQTTATPAA 229
|
|
| PspC_subgroup_1 |
NF033838 |
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
320-409 |
5.35e-03 |
|
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 411407 [Multi-domain] Cd Length: 684 Bit Score: 40.76 E-value: 5.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 320 RKEPEPTTPKEPeptTPKEPEPTTPKEPEPTTPKEPEPTTLKEPE-PTTPKEPEPTTPKEPEpttpkEPEPTTPKEPePT 398
Cdd:NF033838 404 RKAAEEDKVKEK---PAEQPQPAPAPQPEKPAPKPEKPAEQPKAEkPADQQAEEDYARRSEE-----EYNRLTQQQP-PK 474
|
90
....*....|.
gi 1907070847 399 TPKEPEPTTPK 409
Cdd:NF033838 475 TEKPAQPSTPK 485
|
|
| PRK13335 |
PRK13335 |
superantigen-like protein SSL3; Reviewed; |
458-569 |
5.35e-03 |
|
superantigen-like protein SSL3; Reviewed;
Pssm-ID: 139494 [Multi-domain] Cd Length: 356 Bit Score: 40.49 E-value: 5.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 458 EPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEpEPTTLKEPEPTTPKEPEPTTTkePESTTRKePEPTTPkepePTTPK 537
Cdd:PRK13335 69 RQERTPKLEKAPNTNEEKTSASKIEKISQPKQE-EQKSLNISATPAPKQEQSQTT--TESTTPK-TKVTTP----PSTNT 140
|
90 100 110
....*....|....*....|....*....|..
gi 1907070847 538 EPEPTTPKEPEPTTpkepePTTPKEPEPTTPK 569
Cdd:PRK13335 141 PQPMQSTKSDTPQS-----PTIKQAQTDMTPK 167
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
323-503 |
5.42e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 41.08 E-value: 5.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 323 PEPTTPKEPEPTTPKEPEPTTPKEPEPTTP----KEPEPTTL---KEPEPTTPKEPEPTTPKEPEP---TTPKEPEPTTP 392
Cdd:PHA03247 310 PAPPDPPPPAPAGDAEEEDDEDGAMEVVSPlprpRQHYPLGFpkrRRPTWTPPSSLEDLSAGRHHPkraSLPTRKRRSAR 389
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 393 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP--EPTTPKEPEPT-TPKEPE-PTTPKEPEPTTlkEPEPTTPKEPE 468
Cdd:PHA03247 390 HAATPFARGPGGDDQTRPAAPVPASVPTPAPTPVPasAPPPPATPLPSaEPGSDDgPAPPPERQPPA--PATEPAPDDPD 467
|
170 180 190
....*....|....*....|....*....|....*
gi 1907070847 469 PTTPKEPEptTLKEPEPTTPKEPEPTTLKEPEPTT 503
Cdd:PHA03247 468 DATRKALD--ALRERRPPEPPGADLAELLGRHPDT 500
|
|
| PRK12757 |
PRK12757 |
cell division protein FtsN; Provisional |
551-624 |
5.42e-03 |
|
cell division protein FtsN; Provisional
Pssm-ID: 237191 [Multi-domain] Cd Length: 256 Bit Score: 40.03 E-value: 5.42e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907070847 551 TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTR 624
Cdd:PRK12757 111 TPQVPRSTVQIQQQAQQQQPPATTAQPQPVTPPRQTTAPVQPQTPAPVRTQPAAPVTQAVEAPKVEAEKEKEQR 184
|
|
| TonB |
COG0810 |
Periplasmic protein TonB, links inner and outer membranes [Cell wall/membrane/envelope ... |
420-547 |
5.47e-03 |
|
Periplasmic protein TonB, links inner and outer membranes [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 223880 [Multi-domain] Cd Length: 244 Bit Score: 39.77 E-value: 5.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 420 EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPttpkePEPTTPKEPEPTtlKEPEPTTPKEPEPTTLKEP 499
Cdd:COG0810 35 ELVPLAVFLLAAKVLEAPTEEPQPEPEPPEEQPKPPTEPETP-----PEPTPPKPKEKP--KPEKKPKKPKPKPKPKPKP 107
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 1907070847 500 EPTTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEP 547
Cdd:COG0810 108 KPKVKPQPKPKKPPSKTAAKAPAAPNQPARPPSAASASGAATGPSASY 155
|
|
| PRK12757 |
PRK12757 |
cell division protein FtsN; Provisional |
543-612 |
5.57e-03 |
|
cell division protein FtsN; Provisional
Pssm-ID: 237191 [Multi-domain] Cd Length: 256 Bit Score: 39.64 E-value: 5.57e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 543 TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPE 612
Cdd:PRK12757 111 TPQVPRSTVQIQQQAQQQQPPATTAQPQPVTPPRQTTAPVQPQTPAPVRTQPAAPVTQAVEAPKVEAEKE 180
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
603-701 |
5.78e-03 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 40.64 E-value: 5.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 603 PEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPTTPKKpeptttspkttTLKATTLAPKVTAPAEeiqnK 682
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPK-----------PAAAAAAAAAPAAPPA----A 102
|
90
....*....|....*....
gi 1907070847 683 PEETTPASEDSDDSKTTLK 701
Cdd:PRK12270 103 AAAAAPAAAAVEDEVTPLR 121
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
343-428 |
6.00e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 227665 [Multi-domain] Cd Length: 931 Bit Score: 40.58 E-value: 6.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 343 TPKEPEPTTPKEPEpttLKEPEPTTPKEPEPTTPKEPEPTTPkepEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPT 422
Cdd:COG5373 45 GPVAKAAEQMAAPE---AAEAAPLPAAAESIASPEVPPPVPP---APAQEGEAPAAEQPSAVPAPSAAPAPAEPVEPSLA 118
|
....*.
gi 1907070847 423 TPKEPE 428
Cdd:COG5373 119 ANPFAA 124
|
|
| PRK13335 |
PRK13335 |
superantigen-like protein SSL3; Reviewed; |
511-633 |
6.15e-03 |
|
superantigen-like protein SSL3; Reviewed;
Pssm-ID: 139494 [Multi-domain] Cd Length: 356 Bit Score: 40.11 E-value: 6.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 511 TTKEPESTTRKEPEPTTPKEPEPTTPKEpepTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpkEPEPTTPKkPEPT 590
Cdd:PRK13335 60 SATTQAANTRQERTPKLEKAPNTNEEKT---SASKIEKISQPKQEEQKSLNISATPAPKQEQSQT--TTESTTPK-TKVT 133
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 1907070847 591 TPkePEPTTPKEPEPTTPKEPEpttpkepEPTTRKEPEPTTPK 633
Cdd:PRK13335 134 TP--PSTNTPQPMQSTKSDTPQ-------SPTIKQAQTDMTPK 167
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
552-650 |
6.22e-03 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 39.60 E-value: 6.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 552 PKEPEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPKKPEPTTPkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPT 630
Cdd:PRK11633 42 PLVPKPGDRDEPDMMPAaTQALPTQPPEGAAEAVRAGDAAAP-SLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPK 120
|
90 100
....*....|....*....|
gi 1907070847 631 TPKEPEPTTPKEPEPTTPKK 650
Cdd:PRK11633 121 PQQKVEAPPAPKPEPKPVVE 140
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
406-466 |
6.26e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 40.26 E-value: 6.26e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070847 406 TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKE 466
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
502-570 |
6.26e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 40.44 E-value: 6.26e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 502 TTPKEP-EPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 570
Cdd:PTZ00144 120 TGGAPPaAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRE 189
|
|
| PRK13042 |
PRK13042 |
superantigen-like protein SSL4; Reviewed; |
317-409 |
6.43e-03 |
|
superantigen-like protein SSL4; Reviewed;
Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 40.00 E-value: 6.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 317 STTRKEPEPTTPKEPEPTTPKEPEPTT-PKEPEPTtpkepepttlkePEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKe 394
Cdd:PRK13042 22 TTTTQAANATTPSSTKVEAPQSTPPSTkVEAPQSK------------PNATTPPSTKVEAPQQtPNATTPSSTKVETPQ- 88
|
90
....*....|....*
gi 1907070847 395 pEPTTPKEPEPTTPK 409
Cdd:PRK13042 89 -SPTTKQVPTEINPK 102
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
571-684 |
6.53e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 40.47 E-value: 6.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 571 PEPTTPKEPEPTTP-KKPEPTTPKEPEPTTP---KEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPKEPEPTTPKEPEPT 646
Cdd:PRK14951 376 AEKKTPARPEAAAPaAAPVAQAAAAPAPAAApaaAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQA 455
|
90 100 110
....*....|....*....|....*....|....*...
gi 1907070847 647 TPKKPEPTTTSPKTTTLKATTLAPKVTAPAEEIQNKPE 684
Cdd:PRK14951 456 APETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEE 493
|
|
| PRK13335 |
PRK13335 |
superantigen-like protein SSL3; Reviewed; |
367-465 |
6.53e-03 |
|
superantigen-like protein SSL3; Reviewed;
Pssm-ID: 139494 [Multi-domain] Cd Length: 356 Bit Score: 40.11 E-value: 6.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 367 TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpkEPEPTTPKePEPTTPkePEPTTPKEPEPT 446
Cdd:PRK13335 73 TPKLEKAPNTNEEKTSASKIEKISQPKQEEQKSLNISATPAPKQEQSQT--TTESTTPK-TKVTTP--PSTNTPQPMQST 147
|
90 100
....*....|....*....|
gi 1907070847 447 TPKEPEPTTLKEPEP-TTPK 465
Cdd:PRK13335 148 KSDTPQSPTIKQAQTdMTPK 167
|
|
| PRK10905 |
PRK10905 |
cell division protein DamX; Validated |
325-417 |
6.59e-03 |
|
cell division protein DamX; Validated
Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 39.92 E-value: 6.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 325 PTTPKEPEPTTPKEPEPTT---PKEPEPTTPKEPEPTtlkepePTTPKEPEPTTPKEPepttPKEPEPTTPKEPEPTTPK 401
Cdd:PRK10905 143 AKTQTAERPATTRPARKQAviePKKPQATAKTEPKPV------AQTPKRTEPAAPVAS----TKAPAATSTPAPKETATT 212
|
90
....*....|....*..
gi 1907070847 402 EPEPT-TPKEPEPTTPK 417
Cdd:PRK10905 213 APVQTaSPAQTTATPAA 229
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
323-507 |
6.64e-03 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 40.29 E-value: 6.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 323 PEPTTPKEPEPT----TPKEPEPTTPKEPEPTT---PKEPEPTTLKEPEPTTP--KEPEPTTPKEPEPTTPKEPEPTTPK 393
Cdd:PLN03209 388 PTPPSSSPASSKsvdaVAKPAEPDVVPSPGSASnvpEVEPAQVEAKKTRPLSPyaRYEDLKPPTSPSPTAPTGVSPSVSS 467
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 394 epEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpkePEPTTPKEPEPTTLKEPEPTTPKEPEPTTPK 473
Cdd:PLN03209 468 --TSSVPAVPDTAPATAATDAAAPPPANMRPLSPYAVYDDLKPPTS---PSPAAPVGKVAPSSTNEVVKVGNSAPPTALA 542
|
170 180 190
....*....|....*....|....*....|....
gi 1907070847 474 EPEPTTLKEPEPTTPKePEPTTLKEPEPTTPKEP 507
Cdd:PLN03209 543 DEQHHAQPKPRPLSPY-TMYEDLKPPTSPTPSPV 575
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
359-424 |
6.71e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 40.05 E-value: 6.71e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070847 359 TLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKePEPTTPKEPEPTTPKEPEPTTP 424
Cdd:PTZ00144 117 EIDTGGAPPAAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAASK-PTPPAAAKPPEPAPAAKPPPTP 181
|
|
| dnaA |
PRK14086 |
chromosomal replication initiator protein DnaA; |
500-693 |
6.92e-03 |
|
chromosomal replication initiator protein DnaA;
Pssm-ID: 237605 [Multi-domain] Cd Length: 617 Bit Score: 40.19 E-value: 6.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 500 EPTTPKEPEPTTTKEPESTT--RKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEpepTTPKEPEPtTPKEPEPTTPK 577
Cdd:PRK14086 93 GEPAPPPPHARRTSEPELPRpgRRPYEGYGGPRADDRPPGLPRQDQLPTARPAYPAY---QQRPEPGA-WPRAADDYGWQ 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 578 EPEPTTPKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRkePEPTTPKEPEPTTPkEPEPTTPKKPEPTTTS 657
Cdd:PRK14086 169 QQRLGFPPRAPYASPASYAPEQERDREPYDAGRPEYDQRRRDYDHPR--PDWDRPRRDRTDRP-EPPPGAGHVHRGGPGP 245
|
170 180 190
....*....|....*....|....*....|....*.
gi 1907070847 658 PKTTTLKATTLAPKvtAPAEEIQNKPEETTPASEDS 693
Cdd:PRK14086 246 PERDDAPVVPIRPS--APGPLAAQPAPAPGPGEPTA 279
|
|
| PRK13042 |
PRK13042 |
superantigen-like protein SSL4; Reviewed; |
398-489 |
6.96e-03 |
|
superantigen-like protein SSL4; Reviewed;
Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 39.62 E-value: 6.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 398 TTPKEPEPTTPKEPEPTTPKEPEPTT-PKEPEPTtpkePEPTTPKEPEPTTPKEpepttlkEPEPTTPKEPEPTTPKepE 476
Cdd:PRK13042 23 TTTQAANATTPSSTKVEAPQSTPPSTkVEAPQSK----PNATTPPSTKVEAPQQ-------TPNATTPSSTKVETPQ--S 89
|
90
....*....|...
gi 1907070847 477 PTTLKEPEPTTPK 489
Cdd:PRK13042 90 PTTKQVPTEINPK 102
|
|
| PHA03264 |
PHA03264 |
envelope glycoprotein D; Provisional |
516-615 |
7.05e-03 |
|
envelope glycoprotein D; Provisional
Pssm-ID: 223029 [Multi-domain] Cd Length: 416 Bit Score: 39.99 E-value: 7.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 516 ESTTRKEPEPTtPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEP 595
Cdd:PHA03264 259 EESKGYEPPPA-PSGGSPAPPGDDRPEAKPEPGPVEDGAPGRETGGEGEGPEPAGRDGAAGGEPKPGPPRPAPDADRPEG 337
|
90 100
....*....|....*....|.
gi 1907070847 596 EPTTPKEP-EPTTPKEPEPTT 615
Cdd:PHA03264 338 WPSLEAITfPPPTPATPAVPR 358
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
317-378 |
7.07e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 39.88 E-value: 7.07e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907070847 317 STTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKE 378
Cdd:TIGR00601 81 TGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| PRK13042 |
PRK13042 |
superantigen-like protein SSL4; Reviewed; |
382-465 |
7.21e-03 |
|
superantigen-like protein SSL4; Reviewed;
Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 39.62 E-value: 7.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 382 TTPKEPEPTTPKEPEPTTPKEPEPTTpkepEPTTPKE-PEPTTPKEPEPTTPKE-PEPTTPKEPEPTTPKepEPTTLKEP 459
Cdd:PRK13042 23 TTTQAANATTPSSTKVEAPQSTPPST----KVEAPQSkPNATTPPSTKVEAPQQtPNATTPSSTKVETPQ--SPTTKQVP 96
|
....*.
gi 1907070847 460 EPTTPK 465
Cdd:PRK13042 97 TEINPK 102
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
555-678 |
7.23e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 40.47 E-value: 7.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 555 PEPTTPKEPEPTTP-KEPEPTTPKEPEPTTPkkPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTPK 633
Cdd:PRK14951 376 AEKKTPARPEAAAPaAAPVAQAAAAPAPAAA--PAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPA 453
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1907070847 634 EPEPTTPKEPEPTTPkkpepTTTSPKTTTLKATTLAPKVTAPAEE 678
Cdd:PRK14951 454 QAAPETVAIPVRVAP-----EPAVASAAPAPAAAPAAARLTPTEE 493
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
363-436 |
7.30e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 227665 [Multi-domain] Cd Length: 931 Bit Score: 40.58 E-value: 7.30e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070847 363 PEPTTPKEPEPTT--PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 436
Cdd:COG5373 49 KAAEQMAAPEAAEaaPLPAAAESIASPEVPPPVPPAPAQEGEAPAAEQPSAVPAPSAAPAPAEPVEPSLAANPFAA 124
|
|
| PRK14949 |
PRK14949 |
DNA polymerase III subunits gamma and tau; Provisional |
448-603 |
7.45e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237863 [Multi-domain] Cd Length: 944 Bit Score: 40.48 E-value: 7.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 448 PKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPTT 527
Cdd:PRK14949 637 KKSSADRKPKTPPSRAPPASLSKPASSPDASQTSASFDLDPDFELATHQSVPEAALASGSAPAPPPVPDPYDRPPWEEAP 716
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070847 528 PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpkEPEPTtpkePEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEP 603
Cdd:PRK14949 717 EVASANDGPNNAAEGNLSESVEDASNSELQAV--EQQAT----HQPQVQAEAQSPASTTALTQTSSEVQDTELNLV 786
|
|
| PRK12757 |
PRK12757 |
cell division protein FtsN; Provisional |
383-452 |
7.48e-03 |
|
cell division protein FtsN; Provisional
Pssm-ID: 237191 [Multi-domain] Cd Length: 256 Bit Score: 39.26 E-value: 7.48e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 383 TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 452
Cdd:PRK12757 111 TPQVPRSTVQIQQQAQQQQPPATTAQPQPVTPPRQTTAPVQPQTPAPVRTQPAAPVTQAVEAPKVEAEKE 180
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
387-462 |
7.51e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 40.05 E-value: 7.51e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070847 387 PEPTTPKEPEPTTPKePEPTTPKEPEPTTPKEPEPTTPkepeptTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPT 462
Cdd:PTZ00144 122 GAPPAAAPAAAAAAK-AEKTTPEKPKAAAPTPEPPAAS------KPTPPAAAKPPEPAPAAKPPPTPVARADPRET 190
|
|
| PRK01297 |
PRK01297 |
ATP-dependent RNA helicase RhlB; Provisional |
389-463 |
7.70e-03 |
|
ATP-dependent RNA helicase RhlB; Provisional
Pssm-ID: 234938 [Multi-domain] Cd Length: 475 Bit Score: 39.90 E-value: 7.70e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1907070847 389 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTT 463
Cdd:PRK01297 13 EAEQPAPAPPSPAAAPAPPPPAKTAAPATKAAAPAAAAPRAEKPKKDKPRRERKPKPASLWKLEDFVVEPQEGKT 87
|
|
| PRK13335 |
PRK13335 |
superantigen-like protein SSL3; Reviewed; |
498-601 |
7.70e-03 |
|
superantigen-like protein SSL3; Reviewed;
Pssm-ID: 139494 [Multi-domain] Cd Length: 356 Bit Score: 39.72 E-value: 7.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 498 EPEPTTPKEPEPTTTKEPESTTRKEPEPTTPKEpEPTTPKEPEPTTPKEPEP-TTPKEPEPTtpkePEPTTPkePEPTTP 576
Cdd:PRK13335 69 RQERTPKLEKAPNTNEEKTSASKIEKISQPKQE-EQKSLNISATPAPKQEQSqTTTESTTPK----TKVTTP--PSTNTP 141
|
90 100
....*....|....*....|....*.
gi 1907070847 577 KEPEPTTPKKPE-PTTPKEPEPTTPK 601
Cdd:PRK13335 142 QPMQSTKSDTPQsPTIKQAQTDMTPK 167
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
350-418 |
7.77e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 40.05 E-value: 7.77e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 350 TTPKEPEPTTLKEPEPTTPK-EPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 418
Cdd:PTZ00144 120 TGGAPPAAAPAAAAAAKAEKtTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRE 189
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
289-472 |
7.95e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 40.24 E-value: 7.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 289 KEPEPTTPKEPEPTTTKEPEPTTTKEPESTTRKEPEPTTPKEP--EPTTPKEPEPTTPKEPEPTTPKEPEPttlkePEPT 366
Cdd:PRK12323 398 APAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASarGPGGAPAPAPAPAAAPAAAARPAAAG-----PRPV 472
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 367 TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEP--TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPE 444
Cdd:PRK12323 473 AAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPaqPDAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPR 552
|
170 180
....*....|....*....|....*...
gi 1907070847 445 PTTPKEPEPTtlkepePTTPKEPEPTTP 472
Cdd:PRK12323 553 AAAATEPVVA------PRPPRASASGLP 574
|
|
| dnaA |
PRK14086 |
chromosomal replication initiator protein DnaA; |
426-630 |
8.14e-03 |
|
chromosomal replication initiator protein DnaA;
Pssm-ID: 237605 [Multi-domain] Cd Length: 617 Bit Score: 40.19 E-value: 8.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 426 EPEPTTPkepePTTPKEPEPTTPKEPEPTTLKEPEPttpkEPEPTTPKEPEPTTLKEPEPTTPKEPEPttlkePEPTT-P 504
Cdd:PRK14086 93 GEPAPPP----PHARRTSEPELPRPGRRPYEGYGGP----RADDRPPGLPRQDQLPTARPAYPAYQQR-----PEPGAwP 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 505 KEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTpkEPEPTTPKEPEPTTPkEPEPTTP 584
Cdd:PRK14086 160 RAADDYGWQQQRLGFPPRAPYASPASYAPEQERDREPYDAGRPEYDQRRRDYDHP--RPDWDRPRRDRTDRP-EPPPGAG 236
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 1907070847 585 KKPEPTTPKEPEPTTPKEPE----PTTPKEPEPTTPKEPEPTTRKEPEPT 630
Cdd:PRK14086 237 HVHRGGPGPPERDDAPVVPIrpsaPGPLAAQPAPAPGPGEPTARLNPKYT 286
|
|
| FtsN |
COG3087 |
Cell division protein FtsN [Cell cycle control, cell division, chromosome partitioning]; |
471-625 |
8.39e-03 |
|
Cell division protein FtsN [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 225629 [Multi-domain] Cd Length: 264 Bit Score: 39.44 E-value: 8.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 471 TPKEPEPTTLKEPEPTT---PKEPEPTTLKEPEPTTPKEPEPTTTKEpesTTRKEPEPTTPKEPEPTTPKEpeptTPKEP 547
Cdd:COG3087 37 THHKKAPIPFLSNQGTGsllPNKPEEVWSYIKALEDRQIGVPQPTEP---AAVKDAERLTPEQRQLLEQME----VDQKA 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 548 EPTTPKE--PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKK-PEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTR 624
Cdd:COG3087 110 QPTQLGEqpEQARIEEQPRTQSQKAQSQATTVQTQPVKPKPrPEKPQPVAPAPAPEPVEKAPKAEAAPPPKPKAEDAAET 189
|
.
gi 1907070847 625 K 625
Cdd:COG3087 190 R 190
|
|
| PRK13108 |
PRK13108 |
prolipoprotein diacylglyceryl transferase; Reviewed |
509-676 |
8.53e-03 |
|
prolipoprotein diacylglyceryl transferase; Reviewed
Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 39.96 E-value: 8.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 509 PTTTKEPESTTRKEPEPTTPKEPEPTT-PKEPEPTTPKEPEPTTPKEP-EPTTPKEPEPTTPKEPEPTTPKEPEPTTPKK 586
Cdd:PRK13108 276 PKGREAPGALRGSEYVVDEALEREPAElAAAAVASAASAVGPVGPGEPnQPDDVAEAVKAEVAEVTDEVAAESVVQVADR 355
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 587 PEPTTPKePEPTTPKEPEPTTPKEPEPTTPKEPEPTTRKEPE-PTTPKEPEPTTPKEPEPTTPKKPEPTTTSPKTTTLKA 665
Cdd:PRK13108 356 DGESTPA-VEETSEADIEREQPGDLAGQAPAAHQVDAEAASAaPEEPAALASEAHDETEPEVPEKAAPIPDPAKPDELAV 434
|
170
....*....|.
gi 1907070847 666 TTLAPKVTAPA 676
Cdd:PRK13108 435 AGPGDDPAEPD 445
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
362-426 |
8.69e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 39.67 E-value: 8.69e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907070847 362 EPEPTTPKEPE--PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 426
Cdd:PTZ00144 123 APPAAAPAAAAaaKAEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRE 189
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
331-402 |
8.69e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 39.67 E-value: 8.69e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907070847 331 PEPTTPKEPEPTTPKEPEPTTPKEPEPttlkEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKE 402
Cdd:PTZ00144 122 GAPPAAAPAAAAAAKAEKTTPEKPKAA----APTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRE 189
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
430-490 |
8.93e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 39.49 E-value: 8.93e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070847 430 TTPKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKE 490
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| PRK10905 |
PRK10905 |
cell division protein DamX; Validated |
502-632 |
8.94e-03 |
|
cell division protein DamX; Validated
Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 39.54 E-value: 8.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 502 TTPKEPEPTTTKEPESTTRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEpttpkEPEP 581
Cdd:PRK10905 106 TQPQNQQQLNNVAVNSTLPTEPATVAPVRNGNASRQTAKTQTAERPATTRPARKQAVIEPKKPQATAKTEP-----KPVA 180
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 1907070847 582 TTPKKPEPTTPKEPepttPKEPEPTTPKEPEPTTPKEPEPTTRKEPEPTTP 632
Cdd:PRK10905 181 QTPKRTEPAAPVAS----TKAPAATSTPAPKETATTAPVQTASPAQTTATP 227
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
527-604 |
9.09e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 227665 [Multi-domain] Cd Length: 931 Bit Score: 40.19 E-value: 9.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 527 TPKEPEPTTPKEPEPTT--PKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKEPEPTTPKEPE 604
Cdd:COG5373 45 GPVAKAAEQMAAPEAAEaaPLPAAAESIASPEVPPPVPPAPAQEGEAPAAEQPSAVPAPSAAPAPAEPVEPSLAANPFAA 124
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
281-448 |
9.19e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 39.86 E-value: 9.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 281 KKPEPTTPKEPEPTTPKEPEPTTTKEPEPTTTKEPESTTRKEPEPTtpKEPEPTTPKEPEPTTP---KEPEPTTPKEPEP 357
Cdd:PRK12323 402 PPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGA--PAPAPAPAAAPAAAARpaaAGPRPVAAAAAAA 479
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 358 TTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEP--TTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEP 435
Cdd:PRK12323 480 PARAAPAAAPAPADDDPPPWEELPPEFASPAPaqPDAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEP 559
|
170
....*....|....*
gi 1907070847 436 E--PTTPKEPEPTTP 448
Cdd:PRK12323 560 VvaPRPPRASASGLP 574
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
274-596 |
9.20e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 39.97 E-value: 9.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 274 KEPPPTTKKPEPTTPKEPEPTTPKEPEPTTTKEPEptttkepesttrkePEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 353
Cdd:PRK07764 439 PAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAA--------------PEPTAAPAPAPPAAPAPAAAPAAPAAPAAPA 504
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 354 EPEP----------------------TTLKEPEPT-----------------------TPKEPE---------------- 372
Cdd:PRK07764 505 GADDaatlrerwpeilaavpkrsrktWAILLPEATvlgvrgdtlvlgfstgglarrfaSPGNAEvlvtalaeelggdwqv 584
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 373 ----PTTPKEPEPTTPKEPEPTTPKE--PEPTTPKEPEPTTPKEPePTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPT 446
Cdd:PRK07764 585 eavvGPAPGAAGGEGPPAPASSGPPEeaARPAAPAAPAAPAAPAP-AGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDAS 663
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 447 TPKEPEPTTLKEPEPTTPkePEPTTPKEPEPTTlkePEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPEPT 526
Cdd:PRK07764 664 DGGDGWPAKAGGAAPAAP--PPAPAPAAPAAPA---GAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDP 738
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 527 TPKEPEPTTPKEPEPtTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPttpkkPEPTTPKEPE 596
Cdd:PRK07764 739 VPLPPEPDDPPDPAG-APAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAPS-----MDDEDRRDAE 802
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
446-506 |
9.25e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 39.49 E-value: 9.25e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907070847 446 TTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKE 506
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
448-552 |
9.26e-03 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 38.83 E-value: 9.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 448 PKEPEPTTLKEPEPTTP-KEPEPTTPKEPEPTTLKEPEPTTPkEPEPTTLkePEPTTPKEPEPTTTKEPESTTRKEPEPT 526
Cdd:PRK11633 42 PLVPKPGDRDEPDMMPAaTQALPTQPPEGAAEAVRAGDAAAP-SLDPATV--APPNTPVEPEPAPVEPPKPKPVEKPKPK 118
|
90 100
....*....|....*....|....*.
gi 1907070847 527 TPKEPEPTTPKEPEPTTPKEPEPTTP 552
Cdd:PRK11633 119 PKPQQKVEAPPAPKPEPKPVVEEKAA 144
|
|
| PHA03169 |
PHA03169 |
hypothetical protein; Provisional |
369-577 |
9.56e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 39.57 E-value: 9.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 369 KEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK--EPEPTTPKEPEPT 446
Cdd:PHA03169 44 AKPAPPAPTTSGPQVRAVAEQGHRQTESDTETAEESRHGEKEERGQGGPSGSGSESVGSPTPSPSgsAEELASGLSPENT 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 447 TPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTlKEPEPTTPKEPEPTTLKEPEPTTPKEPEPtttkEPESTTRKEPEPT 526
Cdd:PHA03169 124 SGSSPESPASHSPPPSPPSHPGPHEPAPPESHN-PSPNQQPSSFLQPSHEDSPEEPEPPTSEP----EPDSPGPPQSETP 198
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 1907070847 527 TPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPK 577
Cdd:PHA03169 199 TSSPPPQSPPDEPGEPQSPTPQQAPSPNTQQAVEHEDEPTEPEREGPPFPG 249
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
427-502 |
9.64e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 39.67 E-value: 9.64e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070847 427 PEPTTPKEPEPTTPKePEPTTPKEPEPttlKEPEPTTPKEPEPTTPKEPEPTtlkEPEPTTPKEPEPTTLKEPEPT 502
Cdd:PTZ00144 122 GAPPAAAPAAAAAAK-AEKTTPEKPKA---AAPTPEPPAASKPTPPAAAKPP---EPAPAAKPPPTPVARADPRET 190
|
|
| COG3889 |
COG3889 |
Predicted periplasmic protein [Function unknown]; |
445-594 |
9.85e-03 |
|
Predicted periplasmic protein [Function unknown];
Pssm-ID: 226406 [Multi-domain] Cd Length: 872 Bit Score: 39.85 E-value: 9.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 445 PTTPKEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTLKEPEPTTPKEPEPTTTKEPESTTRKEPE 524
Cdd:COG3889 694 PPVGWLPYTNSLYKATTLSSEAKNPDTVKIGQALTVYGSLEVFPAGENWGFIPTTKRVKVRIMDPASGTGTSITTSGTFT 773
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070847 525 PTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKKPEPTTPKE 594
Cdd:COG3889 774 AEVPQSPTKTETTLSYSAYSNTSILIETTSVVITKTVTQTQTTTSSPSPTQTTSPTQTSTSTTTTTSPSQ 843
|
|
|