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Conserved domains on  [gi|1907073056|ref|XP_036011428|]
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ankyrin-3 isoform X16 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
UPA_2 super family cl39303
UPA domain; The UPA domain is conserved in UNC5, PIDD, and Ankyrins. It has a beta sandwich ...
1338-1467 3.32e-58

UPA domain; The UPA domain is conserved in UNC5, PIDD, and Ankyrins. It has a beta sandwich structure.


The actual alignment was detected with superfamily member pfam17809:

Pssm-ID: 375346  Cd Length: 131  Bit Score: 196.93  E-value: 3.32e-58
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056 1338 VPYMAKFVVFAKTNDPVESSLRCFCMTDDRVDKTLEQQENFEEVARSKDIEVLEGKPIYVDCYGNLAPLTKGGQQLVFNF 1417
Cdd:pfam17809    1 VPYLAKFVVFAKRYDPGEARLRCACMTDDGEDKTLEFHEGFTEVARSRDVEVLEGSPVSIELSGNLVPIKKKSQSRQMDF 80
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|
gi 1907073056 1418 YSFKENRLPFSIKIRDTSQEPCGRLSFLKEPKTTKGLPQTAVCNLNITLP 1467
Cdd:pfam17809   81 KAFRENRLDGSVRVKDPSDPPKGLLSFMRDAKVDGGTVSQPLCTLNIVLP 130
ZU5 smart00218
Domain present in ZO-1 and Unc5-like netrin receptors; Domain of unknown function.
1012-1116 8.95e-49

Domain present in ZO-1 and Unc5-like netrin receptors; Domain of unknown function.


:

Pssm-ID: 128514  Cd Length: 104  Bit Score: 169.07  E-value: 8.95e-49
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  1012 SGFLVSFMVDARGGSMRGSRHhGMRIIIPPRKCTAPTRITCRLVKRHKLANPPPMVEGEGLASRLVEMGPAGAQFLGPVI 1091
Cdd:smart00218    1 PSFLVSGTFDARGGRLRGPRT-GVRLIIPPGAIPQGTRYTCYLVVHKTLSTPPPLEEGETLLSPVVECGPHGALFLRPVI 79
                            90       100
                    ....*....|....*....|....*
gi 1907073056  1092 VEIPHFGSMRGKERELIVLRSENGE 1116
Cdd:smart00218   80 LEVPHCASLRPRDWEIVLLRSENGG 104
Death_ank3 cd08803
Death domain of Ankyrin-3; Death Domain (DD) of the human protein ankyrin-3 (ANK-3) and ...
1493-1576 6.76e-47

Death domain of Ankyrin-3; Death Domain (DD) of the human protein ankyrin-3 (ANK-3) and related proteins. Ankyrins are modular proteins comprising three conserved domains, an N-terminal membrane-binding domain containing ANK repeats, a spectrin-binding domain and a C-terminal DD. ANK-3, also called anykyrin-G (for general or giant), is found in neurons and at least one splice variant has been shown to be essential for propagation of action potentials as a binding partner to neurofascin and voltage-gated sodium channels. It is required for maintaining axo-dendritic polarity, and may be a genetic risk factor associated with bipolar disorder. ANK-3 may also play roles in other cell types. Mutations affecting ANK-3 pathways for Na channel localization are associated with Brugada syndrome, a potentially fatal arrythmia. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.


:

Pssm-ID: 176781  Cd Length: 84  Bit Score: 162.92  E-value: 6.76e-47
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056 1493 ERTDIRMAIVADHLGLSWTELARELNFSVDEINQIRVENPNSLISQSFMLLKKWVTRDGKNATTDALTSVLTKINRIDIV 1572
Cdd:cd08803      1 ERTDIRMAIVADHLGLSWTELARELNFSVDEINQIRVENPNSLIAQSFMLLKKWVTRDGKNATTDALTSVLTKINRIDIV 80

                   ....
gi 1907073056 1573 TLLE 1576
Cdd:cd08803     81 TLLE 84
PHA03095 super family cl33707
ankyrin-like protein; Provisional
377-665 1.50e-38

ankyrin-like protein; Provisional


The actual alignment was detected with superfamily member PHA03095:

Pssm-ID: 222980 [Multi-domain]  Cd Length: 471  Bit Score: 151.72  E-value: 1.50e-38
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  377 TALHVAAHCGHYKVAKV---LLDKKASPNAKALNGFTPLHI-ACKKNRIRVMELLLKHGASIQAVTESGLTPIHV--AAF 450
Cdd:PHA03095    49 TPLHLYLHYSSEKVKDIvrlLLEAGADVNAPERCGFTPLHLyLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHVylSGF 128
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  451 MGHVNIVSQLMHHGASPNTTNVRGETALHMAARSGQA--EVVRYLVQDGAQVEAKAKDDQTPLHISARLGK--ADIVQQL 526
Cdd:PHA03095   129 NINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNAnvELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKprARIVREL 208
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  527 LQQGASPNAATTSGYTPLHLAAREGHED--VAAFLLDHGASLSITTKKGFTPLHVAAKYGKLEVASLLLQKSASPDAAGK 604
Cdd:PHA03095   209 IRAGCDPAATDMLGNTPLHSMATGSSCKrsLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSS 288
                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907073056  605 SGLTPLHVAAHYDNQKVALLLLDQGASPHAAAK-------NGYTPLhIAAKKNQMdiATSLLEYGADA 665
Cdd:PHA03095   289 DGNTPLSLMVRNNNGRAVRAALAKNPSAETVAAtlntasvAGGDIP-SDATRLCV--AKVVLRGAFSL 353
Ank_2 super family cl39094
Ankyrin repeats (3 copies);
559-796 3.26e-37

Ankyrin repeats (3 copies);


The actual alignment was detected with superfamily member PHA03100:

Pssm-ID: 453966 [Multi-domain]  Cd Length: 422  Bit Score: 146.73  E-value: 3.26e-37
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  559 LLDHGASLSITTKKGFTPLHVAAKYGKLEVASLLLQKSASPDAAGKSGLTPLHVAAHY-----DNQKVALLLLDQGASPH 633
Cdd:PHA03100    21 IIMEDDLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIkynltDVKEIVKLLLEYGANVN 100
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  634 AAAKNGYTPLHIAA--KKNQMDIATSLLEYGADANAVTRQGIASVHLAAQEGHVD--MVSLLLSRNANVNlsnksgltpl 709
Cdd:PHA03100   101 APDNNGITPLLYAIskKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDlkILKLLIDKGVDIN---------- 170
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  710 hlaaQEDRVNVaevLVNQGAHVDAQTKMGYTPLHVGCHYGNIKIVNFLLQHSAKVNAKTKNGYTALHQAAQQGHTHIINV 789
Cdd:PHA03100   171 ----AKNRVNY---LLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKL 243

                   ....*..
gi 1907073056  790 LLQNNAS 796
Cdd:PHA03100   244 LLNNGPS 250
Ank_2 super family cl39094
Ankyrin repeats (3 copies);
195-437 5.34e-31

Ankyrin repeats (3 copies);


The actual alignment was detected with superfamily member PHA03100:

Pssm-ID: 453966 [Multi-domain]  Cd Length: 422  Bit Score: 128.24  E-value: 5.34e-31
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  195 NDTKGKVRLPALHIAARKDDTKAAALLLqnDTNADVESKMVVNratesgFTPLHIAAHYG-----NINVATLLLNRAAAV 269
Cdd:PHA03100    28 NDYSYKKPVLPLYLAKEARNIDVVKILL--DNGADINSSTKNN------STPLHYLSNIKynltdVKEIVKLLLEYGANV 99
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  270 DFTARNDITPLHVAS--KRGNANMVKLLLDRGAKIDAKTRDGLTPLHCGARSGHE--QVVEMLLDRSAPILSKTKnglsp 345
Cdd:PHA03100   100 NAPDNNGITPLLYAIskKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIdlKILKLLIDKGVDINAKNR----- 174
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  346 lhmatqgdhlncVQLLLQHNVPVDDVTNDYLTALHVAAHCGHYKVAKVLLDKKASPNAKALNGFTPLHIACKKNRIRVME 425
Cdd:PHA03100   175 ------------VNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFK 242
                          250
                   ....*....|..
gi 1907073056  426 LLLKHGASIQAV 437
Cdd:PHA03100   243 LLLNNGPSIKTI 254
Ank_2 super family cl39094
Ankyrin repeats (3 copies);
59-304 3.05e-25

Ankyrin repeats (3 copies);


The actual alignment was detected with superfamily member PHA03100:

Pssm-ID: 453966 [Multi-domain]  Cd Length: 422  Bit Score: 110.91  E-value: 3.05e-25
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056   59 DYIKNGVDVNICNQNGLNA-----------------LHLASKEGHVEVVSELLQREANVDAATKKGNTALHIASLAGQA- 120
Cdd:PHA03100     3 SYIVLTKSRIIKVKNIKYIimeddlndysykkpvlpLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNl 82
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  121 ----EVVKVLVTNGANVNAQSQNGFTPLYMAAQE--NHLEVVRFLLDNGASQSLATEDGFTPLAVALQQGHD--QVVSLL 192
Cdd:PHA03100    83 tdvkEIVKLLLEYGANVNAPDNNGITPLLYAISKksNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIdlKILKLL 162
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  193 LEN----DTKGKVRlpalhiaarkddtkaaaLLLQNDTNADVESKMvvnratesGFTPLHIAAHYGNINVATLLLNRAAA 268
Cdd:PHA03100   163 IDKgvdiNAKNRVN-----------------YLLSYGVPINIKDVY--------GFTPLHYAVYNNNPEFVKYLLDLGAN 217
                          250       260       270
                   ....*....|....*....|....*....|....*.
gi 1907073056  269 VDFTARNDITPLHVASKRGNANMVKLLLDRGAKIDA 304
Cdd:PHA03100   218 PNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPSIKT 253
Ank_4 pfam13637
Ankyrin repeats (many copies);
771-823 6.84e-06

Ankyrin repeats (many copies);


:

Pssm-ID: 372654 [Multi-domain]  Cd Length: 54  Bit Score: 44.96  E-value: 6.84e-06
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|...
gi 1907073056  771 GYTALHQAAQQGHTHIINVLLQNNASPNELTVNGNTALAIARRLGYISVVDTL 823
Cdd:pfam13637    1 ELTALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLL 53
 
Name Accession Description Interval E-value
UPA_2 pfam17809
UPA domain; The UPA domain is conserved in UNC5, PIDD, and Ankyrins. It has a beta sandwich ...
1338-1467 3.32e-58

UPA domain; The UPA domain is conserved in UNC5, PIDD, and Ankyrins. It has a beta sandwich structure.


Pssm-ID: 375346  Cd Length: 131  Bit Score: 196.93  E-value: 3.32e-58
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056 1338 VPYMAKFVVFAKTNDPVESSLRCFCMTDDRVDKTLEQQENFEEVARSKDIEVLEGKPIYVDCYGNLAPLTKGGQQLVFNF 1417
Cdd:pfam17809    1 VPYLAKFVVFAKRYDPGEARLRCACMTDDGEDKTLEFHEGFTEVARSRDVEVLEGSPVSIELSGNLVPIKKKSQSRQMDF 80
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|
gi 1907073056 1418 YSFKENRLPFSIKIRDTSQEPCGRLSFLKEPKTTKGLPQTAVCNLNITLP 1467
Cdd:pfam17809   81 KAFRENRLDGSVRVKDPSDPPKGLLSFMRDAKVDGGTVSQPLCTLNIVLP 130
ZU5 smart00218
Domain present in ZO-1 and Unc5-like netrin receptors; Domain of unknown function.
1012-1116 8.95e-49

Domain present in ZO-1 and Unc5-like netrin receptors; Domain of unknown function.


Pssm-ID: 128514  Cd Length: 104  Bit Score: 169.07  E-value: 8.95e-49
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  1012 SGFLVSFMVDARGGSMRGSRHhGMRIIIPPRKCTAPTRITCRLVKRHKLANPPPMVEGEGLASRLVEMGPAGAQFLGPVI 1091
Cdd:smart00218    1 PSFLVSGTFDARGGRLRGPRT-GVRLIIPPGAIPQGTRYTCYLVVHKTLSTPPPLEEGETLLSPVVECGPHGALFLRPVI 79
                            90       100
                    ....*....|....*....|....*
gi 1907073056  1092 VEIPHFGSMRGKERELIVLRSENGE 1116
Cdd:smart00218   80 LEVPHCASLRPRDWEIVLLRSENGG 104
Death_ank3 cd08803
Death domain of Ankyrin-3; Death Domain (DD) of the human protein ankyrin-3 (ANK-3) and ...
1493-1576 6.76e-47

Death domain of Ankyrin-3; Death Domain (DD) of the human protein ankyrin-3 (ANK-3) and related proteins. Ankyrins are modular proteins comprising three conserved domains, an N-terminal membrane-binding domain containing ANK repeats, a spectrin-binding domain and a C-terminal DD. ANK-3, also called anykyrin-G (for general or giant), is found in neurons and at least one splice variant has been shown to be essential for propagation of action potentials as a binding partner to neurofascin and voltage-gated sodium channels. It is required for maintaining axo-dendritic polarity, and may be a genetic risk factor associated with bipolar disorder. ANK-3 may also play roles in other cell types. Mutations affecting ANK-3 pathways for Na channel localization are associated with Brugada syndrome, a potentially fatal arrythmia. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.


Pssm-ID: 176781  Cd Length: 84  Bit Score: 162.92  E-value: 6.76e-47
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056 1493 ERTDIRMAIVADHLGLSWTELARELNFSVDEINQIRVENPNSLISQSFMLLKKWVTRDGKNATTDALTSVLTKINRIDIV 1572
Cdd:cd08803      1 ERTDIRMAIVADHLGLSWTELARELNFSVDEINQIRVENPNSLIAQSFMLLKKWVTRDGKNATTDALTSVLTKINRIDIV 80

                   ....
gi 1907073056 1573 TLLE 1576
Cdd:cd08803     81 TLLE 84
ZU5 pfam00791
ZU5 domain; Domain present in ZO-1 and Unc5-like netrin receptors Domain of unknown function.
1016-1112 3.66e-39

ZU5 domain; Domain present in ZO-1 and Unc5-like netrin receptors Domain of unknown function.


Pssm-ID: 425872  Cd Length: 96  Bit Score: 141.11  E-value: 3.66e-39
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056 1016 VSFMVDARGGSMRGSrHHGMRIIIPPRKCTAPTRITCRLVKRHKLANPPPMVEGEGLASRLVEMGPAGAQFLGPVIVEIP 1095
Cdd:pfam00791    1 ASGLFDSRGGRLVLP-NSGVSLLIPPGAIPEGTRIEIYLAVLRDDTSRPPLEEGETLLSPVVECGPPGLKFLKPVILEIP 79
                           90
                   ....*....|....*..
gi 1907073056 1096 HFGSMRGKERELIVLRS 1112
Cdd:pfam00791   80 HCASLRPGDWEIVLKRS 96
PHA03095 PHA03095
ankyrin-like protein; Provisional
377-665 1.50e-38

ankyrin-like protein; Provisional


Pssm-ID: 222980 [Multi-domain]  Cd Length: 471  Bit Score: 151.72  E-value: 1.50e-38
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  377 TALHVAAHCGHYKVAKV---LLDKKASPNAKALNGFTPLHI-ACKKNRIRVMELLLKHGASIQAVTESGLTPIHV--AAF 450
Cdd:PHA03095    49 TPLHLYLHYSSEKVKDIvrlLLEAGADVNAPERCGFTPLHLyLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHVylSGF 128
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  451 MGHVNIVSQLMHHGASPNTTNVRGETALHMAARSGQA--EVVRYLVQDGAQVEAKAKDDQTPLHISARLGK--ADIVQQL 526
Cdd:PHA03095   129 NINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNAnvELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKprARIVREL 208
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  527 LQQGASPNAATTSGYTPLHLAAREGHED--VAAFLLDHGASLSITTKKGFTPLHVAAKYGKLEVASLLLQKSASPDAAGK 604
Cdd:PHA03095   209 IRAGCDPAATDMLGNTPLHSMATGSSCKrsLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSS 288
                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907073056  605 SGLTPLHVAAHYDNQKVALLLLDQGASPHAAAK-------NGYTPLhIAAKKNQMdiATSLLEYGADA 665
Cdd:PHA03095   289 DGNTPLSLMVRNNNGRAVRAALAKNPSAETVAAtlntasvAGGDIP-SDATRLCV--AKVVLRGAFSL 353
PHA03100 PHA03100
ankyrin repeat protein; Provisional
559-796 3.26e-37

ankyrin repeat protein; Provisional


Pssm-ID: 222984 [Multi-domain]  Cd Length: 422  Bit Score: 146.73  E-value: 3.26e-37
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  559 LLDHGASLSITTKKGFTPLHVAAKYGKLEVASLLLQKSASPDAAGKSGLTPLHVAAHY-----DNQKVALLLLDQGASPH 633
Cdd:PHA03100    21 IIMEDDLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIkynltDVKEIVKLLLEYGANVN 100
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  634 AAAKNGYTPLHIAA--KKNQMDIATSLLEYGADANAVTRQGIASVHLAAQEGHVD--MVSLLLSRNANVNlsnksgltpl 709
Cdd:PHA03100   101 APDNNGITPLLYAIskKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDlkILKLLIDKGVDIN---------- 170
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  710 hlaaQEDRVNVaevLVNQGAHVDAQTKMGYTPLHVGCHYGNIKIVNFLLQHSAKVNAKTKNGYTALHQAAQQGHTHIINV 789
Cdd:PHA03100   171 ----AKNRVNY---LLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKL 243

                   ....*..
gi 1907073056  790 LLQNNAS 796
Cdd:PHA03100   244 LLNNGPS 250
PHA03100 PHA03100
ankyrin repeat protein; Provisional
195-437 5.34e-31

ankyrin repeat protein; Provisional


Pssm-ID: 222984 [Multi-domain]  Cd Length: 422  Bit Score: 128.24  E-value: 5.34e-31
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  195 NDTKGKVRLPALHIAARKDDTKAAALLLqnDTNADVESKMVVNratesgFTPLHIAAHYG-----NINVATLLLNRAAAV 269
Cdd:PHA03100    28 NDYSYKKPVLPLYLAKEARNIDVVKILL--DNGADINSSTKNN------STPLHYLSNIKynltdVKEIVKLLLEYGANV 99
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  270 DFTARNDITPLHVAS--KRGNANMVKLLLDRGAKIDAKTRDGLTPLHCGARSGHE--QVVEMLLDRSAPILSKTKnglsp 345
Cdd:PHA03100   100 NAPDNNGITPLLYAIskKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIdlKILKLLIDKGVDINAKNR----- 174
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  346 lhmatqgdhlncVQLLLQHNVPVDDVTNDYLTALHVAAHCGHYKVAKVLLDKKASPNAKALNGFTPLHIACKKNRIRVME 425
Cdd:PHA03100   175 ------------VNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFK 242
                          250
                   ....*....|..
gi 1907073056  426 LLLKHGASIQAV 437
Cdd:PHA03100   243 LLLNNGPSIKTI 254
DEATH smart00005
DEATH domain, found in proteins involved in cell death (apoptosis); Alpha-helical domain ...
1492-1578 6.54e-26

DEATH domain, found in proteins involved in cell death (apoptosis); Alpha-helical domain present in a variety of proteins with apoptotic functions. Some (but not all) of these domains form homotypic and heterotypic dimers.


Pssm-ID: 214467 [Multi-domain]  Cd Length: 88  Bit Score: 102.87  E-value: 6.54e-26
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  1492 CERTDIRMAIVADH-LGLSWTELARELNFSVDEINQIRVENPNSLISQSFMLLKKWVTRDGKNATTDALTSVLTKINRID 1570
Cdd:smart00005    1 PELTRQKLAKLLDHpLGLDWRELARKLGLSEADIDQIRTEAPRDLAEQSVQLLRLWEQREGKNATLGTLLEALRKMGRDD 80

                    ....*...
gi 1907073056  1571 IVTLLEGP 1578
Cdd:smart00005   81 AVELLRSE 88
PHA03100 PHA03100
ankyrin repeat protein; Provisional
59-304 3.05e-25

ankyrin repeat protein; Provisional


Pssm-ID: 222984 [Multi-domain]  Cd Length: 422  Bit Score: 110.91  E-value: 3.05e-25
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056   59 DYIKNGVDVNICNQNGLNA-----------------LHLASKEGHVEVVSELLQREANVDAATKKGNTALHIASLAGQA- 120
Cdd:PHA03100     3 SYIVLTKSRIIKVKNIKYIimeddlndysykkpvlpLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNl 82
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  121 ----EVVKVLVTNGANVNAQSQNGFTPLYMAAQE--NHLEVVRFLLDNGASQSLATEDGFTPLAVALQQGHD--QVVSLL 192
Cdd:PHA03100    83 tdvkEIVKLLLEYGANVNAPDNNGITPLLYAISKksNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIdlKILKLL 162
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  193 LEN----DTKGKVRlpalhiaarkddtkaaaLLLQNDTNADVESKMvvnratesGFTPLHIAAHYGNINVATLLLNRAAA 268
Cdd:PHA03100   163 IDKgvdiNAKNRVN-----------------YLLSYGVPINIKDVY--------GFTPLHYAVYNNNPEFVKYLLDLGAN 217
                          250       260       270
                   ....*....|....*....|....*....|....*.
gi 1907073056  269 VDFTARNDITPLHVASKRGNANMVKLLLDRGAKIDA 304
Cdd:PHA03100   218 PNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPSIKT 253
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
318-506 1.06e-23

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 223738 [Multi-domain]  Cd Length: 235  Bit Score: 101.82  E-value: 1.06e-23
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  318 RSGHEQVVEMLLDRSAPILSKTKNGLSPLH--MATQGDHLNCVQLLLQHNVPVDD-VTNDYLTALHVAAHCGHYKVAKVL 394
Cdd:COG0666     13 KCFLDLLLVALLLLLSLDLSNPSDKKLNLYleLALLPAASLSELLLKLIVDRHLAaRDLDGRLPLHSAASKGDDKIVKLL 92
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  395 LDKKASPNAKALNGFTPLHIACKKNR-----IRVMELLLKHGASIQAVT---ESGLTPIHVAAFMGHVNIVSQLMHHGAS 466
Cdd:COG0666     93 LASGADVNAKDADGDTPLHLAALNGNppegnIEVAKLLLEAGADLDVNNlrdEDGNTPLHWAALNGDADIVELLLEAGAD 172
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|
gi 1907073056  467 PNTTNVRGETALHMAARSGQAEVVRYLVQDGAQVEAKAKD 506
Cdd:COG0666    173 PNSRNSYGVTALDPAAKNGRIELVKLLLDKGLHLSLLKFN 212
Ank_2 pfam12796
Ankyrin repeats (3 copies);
78-164 3.40e-22

Ankyrin repeats (3 copies);


Pssm-ID: 432791 [Multi-domain]  Cd Length: 91  Bit Score: 92.49  E-value: 3.40e-22
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056   78 LHLASKEGHVEVVSELLQREANVDAATKKGNTALHIASLAGQAEVVKVLVTNgANVNAQSqNGFTPLYMAAQENHLEVVR 157
Cdd:pfam12796    1 LMLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLEH-ADVNLKD-NGRTALHYAARSGHLEIVK 78

                   ....*..
gi 1907073056  158 FLLDNGA 164
Cdd:pfam12796   79 LLLEKGA 85
Ank_2 pfam12796
Ankyrin repeats (3 copies);
478-569 1.86e-21

Ankyrin repeats (3 copies);


Pssm-ID: 432791 [Multi-domain]  Cd Length: 91  Bit Score: 90.57  E-value: 1.86e-21
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  478 LHMAARSGQAEVVRYLVQDGAQVEAKAKDDQTPLHISARLGKADIVQQLLQQGASpnAATTSGYTPLHLAAREGHEDVAA 557
Cdd:pfam12796    1 LMLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLEHADV--NLKDNGRTALHYAARSGHLEIVK 78
                           90
                   ....*....|..
gi 1907073056  558 FLLDHGASLSIT 569
Cdd:pfam12796   79 LLLEKGADINVK 90
Ank_2 pfam12796
Ankyrin repeats (3 copies);
677-767 1.04e-20

Ankyrin repeats (3 copies);


Pssm-ID: 432791 [Multi-domain]  Cd Length: 91  Bit Score: 88.26  E-value: 1.04e-20
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  677 HLAAQEGHVDMVSLLLSRNANVNLSNKSGLTPLHLAAQEDRVNVAEVLVNQgAHVDAQTKmGYTPLHVGCHYGNIKIVNF 756
Cdd:pfam12796    2 MLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLEH-ADVNLKDN-GRTALHYAARSGHLEIVKL 79
                           90
                   ....*....|.
gi 1907073056  757 LLQHSAKVNAK 767
Cdd:pfam12796   80 LLEKGADINVK 90
Ank_2 pfam12796
Ankyrin repeats (3 copies);
313-404 4.11e-20

Ankyrin repeats (3 copies);


Pssm-ID: 432791 [Multi-domain]  Cd Length: 91  Bit Score: 86.71  E-value: 4.11e-20
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  313 LHCGARSGHEQVVEMLLDRSAPILSKTKNGLSPLHMATQGDHLNCVQLLLQHNVPvdDVTNDYLTALHVAAHCGHYKVAK 392
Cdd:pfam12796    1 LMLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLEHADV--NLKDNGRTALHYAARSGHLEIVK 78
                           90
                   ....*....|..
gi 1907073056  393 VLLDKKASPNAK 404
Cdd:pfam12796   79 LLLEKGADINVK 90
Death pfam00531
Death domain;
1498-1576 6.06e-20

Death domain;


Pssm-ID: 425735  Cd Length: 83  Bit Score: 85.83  E-value: 6.06e-20
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907073056 1498 RMAIVADHLGLSWTELARELNFSVDEINQIRVENPNsLISQSFMLLKKWVTRDGKNATTDALTSVLTKINRIDIVTLLE 1576
Cdd:pfam00531    3 QLDRLLDPLGKDWRELARKLGLSENEIDEIESENPD-LRSQTYELLRLWEQREGKNATVGTLLEALRKLGRRDAAEKIQ 80
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
171-365 8.77e-18

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 223738 [Multi-domain]  Cd Length: 235  Bit Score: 84.49  E-value: 8.77e-18
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  171 EDGFTPLAVALQQGHDQVVSLLLENDTKGKVRLPALHIAARkDDTKAAALLLQNDTNADVESKMVVNRATESGFTPLHIA 250
Cdd:COG0666      2 KPSLSALLLINKCFLDLLLVALLLLLSLDLSNPSDKKLNLY-LELALLPAASLSELLLKLIVDRHLAARDLDGRLPLHSA 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  251 AHYGNINVATLLLNRAAAVDFTARNDITPLHVASKRGNAN-----MVKLLLDRGAKIDAKTR---DGLTPLHCGARSGHE 322
Cdd:COG0666     81 ASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPegnieVAKLLLEAGADLDVNNLrdeDGNTPLHWAALNGDA 160
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|...
gi 1907073056  323 QVVEMLLDRSAPILSKTKNGLSPLHMATQGDHLNCVQLLLQHN 365
Cdd:COG0666    161 DIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG 203
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
46-172 4.93e-17

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 223738 [Multi-domain]  Cd Length: 235  Bit Score: 82.56  E-value: 4.93e-17
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056   46 LRAARAGHLEKALDYIKNGVDVNICNQNGLNALHLASKEGH-----VEVVSELLQREANVDAAT---KKGNTALHIASLA 117
Cdd:COG0666     78 HSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNppegnIEVAKLLLEAGADLDVNNlrdEDGNTPLHWAALN 157
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 1907073056  118 GQAEVVKVLVTNGANVNAQSQNGFTPLYMAAQENHLEVVRFLLDNGASQSLATED 172
Cdd:COG0666    158 GDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKGLHLSLLKFN 212
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
636-824 6.02e-17

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 223738 [Multi-domain]  Cd Length: 235  Bit Score: 82.18  E-value: 6.02e-17
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  636 AKNGYTPLHIAAKKNQMDIATSLLEYGADANAVTRQGIASVHLAAQEGHVDMVSLLLSRNANVNLSN---KSGLTPLHLA 712
Cdd:COG0666      1 SKPSLSALLLINKCFLDLLLVALLLLLSLDLSNPSDKKLNLYLELALLPAASLSELLLKLIVDRHLAardLDGRLPLHSA 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  713 AQEDRVNVAEVLVNQGAHVDAQTKMGYTPLHVGCHYGN-----IKIVNFLLQHSAK---VNAKTKNGYTALHQAAQQGHT 784
Cdd:COG0666     81 ASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNppegnIEVAKLLLEAGADldvNNLRDEDGNTPLHWAALNGDA 160
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|
gi 1907073056  785 HIINVLLQNNASPNELTVNGNTALAIARRLGYISVVDTLK 824
Cdd:COG0666    161 DIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLL 200
TRPV5-6 cd22192
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 5 and 6; TRPV5 and ...
575-759 6.82e-16

Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 5 and 6; TRPV5 and TRPV6 (TRPV5/6) are two homologous members within the vanilloid subfamily of the transient receptor potential (TRP) family. TRPV5 and TRPV6 show only 30-40% homology with other members of the TRP family and have unique properties that differentiates them from other TRP channels. They mediate calcium uptake in epithelia and their expression is dramatically increased in numerous types of cancer. The structure of TRPV5/6 shows the typical topology features of all TRP family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6, which is predicted to form the Ca2+ pore, and large intracellular N- and C-terminal domains. The N-terminal domain of TRPV5/6 contains three ankyrin repeats. This structural element is present in several proteins and plays a role in protein-protein interactions. The N- and C-terminal tails of TRPV5/6 each contain an internal PDZ motif which can function as part of a molecular scaffold via interaction with PDZ-domain containing proteins. A major difference between the properties of TRPV5 and TRPV6 is in their tissue distribution: TRPV5 is predominantly expressed in the distal convoluted tubules (DCT) and connecting tubules (CNT) of the kidney, with limited expression in extrarenal tissues. In contrast, TRPV6 has a broader expression pattern such as expression in the intestine, kidney, placenta, epididymis, exocrine tissues, and a few other tissues.


Pssm-ID: 411976 [Multi-domain]  Cd Length: 609  Bit Score: 83.52  E-value: 6.82e-16
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  575 TPLHVAAKYGKLE-VASLLLQKSASPDAAGKSGLTPLHVAAHYDNQKVALLLLDqgASPH-------AAAKNGYTPLHIA 646
Cdd:cd22192     19 SPLLLAAKENDVQaIKKLLKCPSCDLFQRGALGETALHVAALYDNLEAAVVLME--AAPElvnepmtSDLYQGETALHIA 96
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  647 AKKNQMDIATSLLEYGADANA--VT----RQGIAS--------VHLAAQEGHVDMVSLLLSRNANVNLSNKSGLTPLH-L 711
Cdd:cd22192     97 VVNQNLNLVRELIARGADVVSprATgtffRPGPKNliyygehpLSFAACVGNEEIVRLLIEHGADIRAQDSLGNTVLHiL 176
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 1907073056  712 AAQEDRVNVAEV---LVNQGAHVDAQT------KMGYTPLHVGCHYGNIKIVNFLLQ 759
Cdd:cd22192    177 VLQPNKTFACQMydlILSYDKEDDLQPldlvpnNQGLTPFKLAAKEGNIVMFQHLVQ 233
TRPV5-6 cd22192
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 5 and 6; TRPV5 and ...
509-731 6.29e-14

Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 5 and 6; TRPV5 and TRPV6 (TRPV5/6) are two homologous members within the vanilloid subfamily of the transient receptor potential (TRP) family. TRPV5 and TRPV6 show only 30-40% homology with other members of the TRP family and have unique properties that differentiates them from other TRP channels. They mediate calcium uptake in epithelia and their expression is dramatically increased in numerous types of cancer. The structure of TRPV5/6 shows the typical topology features of all TRP family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6, which is predicted to form the Ca2+ pore, and large intracellular N- and C-terminal domains. The N-terminal domain of TRPV5/6 contains three ankyrin repeats. This structural element is present in several proteins and plays a role in protein-protein interactions. The N- and C-terminal tails of TRPV5/6 each contain an internal PDZ motif which can function as part of a molecular scaffold via interaction with PDZ-domain containing proteins. A major difference between the properties of TRPV5 and TRPV6 is in their tissue distribution: TRPV5 is predominantly expressed in the distal convoluted tubules (DCT) and connecting tubules (CNT) of the kidney, with limited expression in extrarenal tissues. In contrast, TRPV6 has a broader expression pattern such as expression in the intestine, kidney, placenta, epididymis, exocrine tissues, and a few other tissues.


Pssm-ID: 411976 [Multi-domain]  Cd Length: 609  Bit Score: 76.98  E-value: 6.29e-14
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  509 TPLHISARLGKADIVQQLL-QQGASPNAATTSGYTPLHLAAREGHEDVAAFLLDHGASL---SITTK--KGFTPLHVAAK 582
Cdd:cd22192     19 SPLLLAAKENDVQAIKKLLkCPSCDLFQRGALGETALHVAALYDNLEAAVVLMEAAPELvnePMTSDlyQGETALHIAVV 98
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  583 YGKLEVASLLLQKSA---SPDAAG------KSGLT-----PLHVAAHYDNQKVALLLLDQGASPHAAAKNGYTPLHIAAK 648
Cdd:cd22192     99 NQNLNLVRELIARGAdvvSPRATGtffrpgPKNLIyygehPLSFAACVGNEEIVRLLIEHGADIRAQDSLGNTVLHILVL 178
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  649 KNQMDIATSLLEYgadanavtrqgiasvhLAAQEGHVDMVSLLLsrnanvnLSNKSGLTPLHLAAQEDRVNVAEVLVNQG 728
Cdd:cd22192    179 QPNKTFACQMYDL----------------ILSYDKEDDLQPLDL-------VPNNQGLTPFKLAAKEGNIVMFQHLVQKR 235

                   ...
gi 1907073056  729 AHV 731
Cdd:cd22192    236 RHI 238
trp TIGR00870
transient-receptor-potential calcium channel protein; The Transient Receptor Potential Ca2+ ...
385-594 2.30e-13

transient-receptor-potential calcium channel protein; The Transient Receptor Potential Ca2+ Channel (TRP-CC) Family (TC. 1.A.4)The TRP-CC family has also been called the store-operated calcium channel (SOC) family. The prototypical members include the Drosophila retinal proteinsTRP and TRPL (Montell and Rubin, 1989; Hardie and Minke, 1993). SOC members of the family mediate the entry of extracellular Ca2+ into cells in responseto depletion of intracellular Ca2+ stores (Clapham, 1996) and agonist stimulated production of inositol-1,4,5 trisphosphate (IP3). One member of the TRP-CCfamily, mammalian Htrp3, has been shown to form a tight complex with the IP3 receptor (TC #1.A.3.2.1). This interaction is apparently required for IP3 tostimulate Ca2+ release via Htrp3. The vanilloid receptor subtype 1 (VR1), which is the receptor for capsaicin (the ?hot? ingredient in chili peppers) and servesas a heat-activated ion channel in the pain pathway (Caterina et al., 1997), is also a member of this family. The stretch-inhibitable non-selective cation channel(SIC) is identical to the vanilloid receptor throughout all of its first 700 residues, but it exhibits a different sequence in its last 100 residues. VR1 and SICtransport monovalent cations as well as Ca2+. VR1 is about 10x more permeable to Ca2+ than to monovalent ions. Ca2+ overload probably causes cell deathafter chronic exposure to capsaicin. (McCleskey and Gold, 1999). [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273311 [Multi-domain]  Cd Length: 743  Bit Score: 75.50  E-value: 2.30e-13
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  385 CGHYKVAKVLLDKKASPNAKALN-------GFTPLHIACKKNRIR-VMELLLKHGASIqavtESGLTPIHVAAfMGHVNI 456
Cdd:TIGR00870   22 LPAAERGDLASVYRDLEEPKKLNincpdrlGRSALFVAAIENENLeLTELLLNLSCRG----AVGDTLLHAIS-LEYVDA 96
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  457 VSQLM-----HHGASPNTTNV---------RGETALHMAARSGQAEVVRYLVQDGAQVEAKAKDD--------------Q 508
Cdd:TIGR00870   97 VEAILlhllaAFRKSGPLELAndqytseftPGITALHLAAHRQNYEIVKLLLERGASVPARACGDffvksqgvdsfyhgE 176
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  509 TPLHISARLGKADIVQQLLQQGASPNAATTSGYTPLHLAAREGHEDVA---------AFLLDHGASLS-------ITTKK 572
Cdd:TIGR00870  177 SPLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLLVMENEFKAEyeelscqmyNFALSLLDKLRdskelevILNHQ 256
                          250       260
                   ....*....|....*....|..
gi 1907073056  573 GFTPLHVAAKYGKLEVASLLLQ 594
Cdd:TIGR00870  257 GLTPLKLAAKEGRIVLFRLKLA 278
TRPV3 cd22194
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), type 3; TRPV3 is a ...
106-265 1.23e-12

Transient Receptor Potential channel, Vanilloid subfamily (TRPV), type 3; TRPV3 is a temperature-sensitive Transient Receptor Potential (TRP) ion channel that is activated by warm temperatures, synthetic small-molecule chemicals, and natural compounds from plants. TRPV3 function is regulated by physiological factors such as extracellular divalent cations and acidic pH, intracellular adenosine triphosphate, membrane voltage, and arachidonic acid. It is expressed in both neuronal and non-neuronal tissues including epidermal keratinocytes, epithelial cells in the gut, endothelial cells in blood vessels, and neurons in dorsal root ganglia and CNS. TRPV3 null mice have abnormal hair morphogenesis and compromised skin barrier function. It may play roles in inflammatory skin disorders, such as itch and pain sensation. TRPV3 is also expressed by many neuronal and non-neuronal tissues, showing that TRPV3 might play roles in other unknown cellular and physiological functions. TRPV3 belongs to the vanilloid TRP subfamily (TRPV), named after the founding member vanilloid receptor 1 (TRPV1). The structure of TRPV shows the typical topology features of all TRP ion channel family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6 and large intracellular N- and C-terminal domains.


Pssm-ID: 411978 [Multi-domain]  Cd Length: 680  Bit Score: 73.25  E-value: 1.23e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  106 KGNTALHIASLAGQAEVVKVLVTNGANVNAQSQNGF--------------TPLYMAAQENHLEVVRFLLDNGasqslate 171
Cdd:cd22194    140 EGQTALNIAIERRQGDIVKLLIAKGADVNAHAKGVFfnpkykhegfyfgeTPLALAACTNQPEIVQLLMEKE-------- 211
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  172 dgftPLAVALQqghdqvvslllenDTKGKVRLPALHIAArkDDTKAaalllQNDTNADVESKMVVNRATES--------G 243
Cdd:cd22194    212 ----STDITSQ-------------DSRGNTVLHALVTVA--EDSKT-----QNDFVKRMYDMILLKSENKNletirnneG 267
                          170       180
                   ....*....|....*....|..
gi 1907073056  244 FTPLHIAAHYGNINVATLLLNR 265
Cdd:cd22194    268 LTPLQLAAKMGKAEILKYILSR 289
TRPV5-6 cd22192
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 5 and 6; TRPV5 and ...
142-363 3.77e-12

Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 5 and 6; TRPV5 and TRPV6 (TRPV5/6) are two homologous members within the vanilloid subfamily of the transient receptor potential (TRP) family. TRPV5 and TRPV6 show only 30-40% homology with other members of the TRP family and have unique properties that differentiates them from other TRP channels. They mediate calcium uptake in epithelia and their expression is dramatically increased in numerous types of cancer. The structure of TRPV5/6 shows the typical topology features of all TRP family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6, which is predicted to form the Ca2+ pore, and large intracellular N- and C-terminal domains. The N-terminal domain of TRPV5/6 contains three ankyrin repeats. This structural element is present in several proteins and plays a role in protein-protein interactions. The N- and C-terminal tails of TRPV5/6 each contain an internal PDZ motif which can function as part of a molecular scaffold via interaction with PDZ-domain containing proteins. A major difference between the properties of TRPV5 and TRPV6 is in their tissue distribution: TRPV5 is predominantly expressed in the distal convoluted tubules (DCT) and connecting tubules (CNT) of the kidney, with limited expression in extrarenal tissues. In contrast, TRPV6 has a broader expression pattern such as expression in the intestine, kidney, placenta, epididymis, exocrine tissues, and a few other tissues.


Pssm-ID: 411976 [Multi-domain]  Cd Length: 609  Bit Score: 71.20  E-value: 3.77e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  142 TPLYMAAQENHLEVVRFLLDNgasqslATEDGFTplavalqqghdqvvslllendtKGKVRLPALHIAARKDDTKAAALL 221
Cdd:cd22192     19 SPLLLAAKENDVQAIKKLLKC------PSCDLFQ----------------------RGALGETALHVAALYDNLEAAVVL 70
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  222 LQNDTNadveskmVVNRATES----GFTPLHIAAHYGNINVATLLLNRAAAVdFTARNDIT---------------PLHV 282
Cdd:cd22192     71 MEAAPE-------LVNEPMTSdlyqGETALHIAVVNQNLNLVRELIARGADV-VSPRATGTffrpgpknliyygehPLSF 142
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  283 ASKRGNANMVKLLLDRGAKIDAKTRDGLTPLH-----------CgarsgheQVVEMLL-----DRSAPiLSKTKN--GLS 344
Cdd:cd22192    143 AACVGNEEIVRLLIEHGADIRAQDSLGNTVLHilvlqpnktfaC-------QMYDLILsydkeDDLQP-LDLVPNnqGLT 214
                          250
                   ....*....|....*....
gi 1907073056  345 PLHMATQGDHLNCVQLLLQ 363
Cdd:cd22192    215 PFKLAAKEGNIVMFQHLVQ 233
trp TIGR00870
transient-receptor-potential calcium channel protein; The Transient Receptor Potential Ca2+ ...
135-450 4.80e-08

transient-receptor-potential calcium channel protein; The Transient Receptor Potential Ca2+ Channel (TRP-CC) Family (TC. 1.A.4)The TRP-CC family has also been called the store-operated calcium channel (SOC) family. The prototypical members include the Drosophila retinal proteinsTRP and TRPL (Montell and Rubin, 1989; Hardie and Minke, 1993). SOC members of the family mediate the entry of extracellular Ca2+ into cells in responseto depletion of intracellular Ca2+ stores (Clapham, 1996) and agonist stimulated production of inositol-1,4,5 trisphosphate (IP3). One member of the TRP-CCfamily, mammalian Htrp3, has been shown to form a tight complex with the IP3 receptor (TC #1.A.3.2.1). This interaction is apparently required for IP3 tostimulate Ca2+ release via Htrp3. The vanilloid receptor subtype 1 (VR1), which is the receptor for capsaicin (the ?hot? ingredient in chili peppers) and servesas a heat-activated ion channel in the pain pathway (Caterina et al., 1997), is also a member of this family. The stretch-inhibitable non-selective cation channel(SIC) is identical to the vanilloid receptor throughout all of its first 700 residues, but it exhibits a different sequence in its last 100 residues. VR1 and SICtransport monovalent cations as well as Ca2+. VR1 is about 10x more permeable to Ca2+ than to monovalent ions. Ca2+ overload probably causes cell deathafter chronic exposure to capsaicin. (McCleskey and Gold, 1999). [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273311 [Multi-domain]  Cd Length: 743  Bit Score: 58.17  E-value: 4.80e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  135 AQSQNGFTPlymAAQENHLEVVRFLLDNGASQSLATED--GFTPLAVALQQG-HDQVVSLLLENDTKGKVRLPALHIAAR 211
Cdd:TIGR00870   15 SDEEKAFLP---AAERGDLASVYRDLEEPKKLNINCPDrlGRSALFVAAIENeNLELTELLLNLSCRGAVGDTLLHAISL 91
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  212 --KDDTKAAALLLQNDTNADVESKMVVNRATeSGFTPlhiaahygninvatlllnraaavdftarnDITPLHVASKRGNA 289
Cdd:TIGR00870   92 eyVDAVEAILLHLLAAFRKSGPLELANDQYT-SEFTP-----------------------------GITALHLAAHRQNY 141
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  290 NMVKLLLDRGAKIDAKT--------------RDGLTPLHCGARSGHEQVVEMLLDRSAPILSKTKNGLSPLHMAtqgdhl 355
Cdd:TIGR00870  142 EIVKLLLERGASVPARAcgdffvksqgvdsfYHGESPLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLL------ 215
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  356 ncvqlllqhnVPVDDVTNDYLTalhVAAHCghYKVAKVLLDKKASPNAKAL----NGFTPLHIACKKNRIRVMELLLKHG 431
Cdd:TIGR00870  216 ----------VMENEFKAEYEE---LSCQM--YNFALSLLDKLRDSKELEVilnhQGLTPLKLAAKEGRIVLFRLKLAIK 280
                          330
                   ....*....|....*....
gi 1907073056  432 ASIQAVTESGLTPIHVAAF 450
Cdd:TIGR00870  281 YKQKKFVAWPNGQQLLSLY 299
trp TIGR00870
transient-receptor-potential calcium channel protein; The Transient Receptor Potential Ca2+ ...
54-265 5.88e-07

transient-receptor-potential calcium channel protein; The Transient Receptor Potential Ca2+ Channel (TRP-CC) Family (TC. 1.A.4)The TRP-CC family has also been called the store-operated calcium channel (SOC) family. The prototypical members include the Drosophila retinal proteinsTRP and TRPL (Montell and Rubin, 1989; Hardie and Minke, 1993). SOC members of the family mediate the entry of extracellular Ca2+ into cells in responseto depletion of intracellular Ca2+ stores (Clapham, 1996) and agonist stimulated production of inositol-1,4,5 trisphosphate (IP3). One member of the TRP-CCfamily, mammalian Htrp3, has been shown to form a tight complex with the IP3 receptor (TC #1.A.3.2.1). This interaction is apparently required for IP3 tostimulate Ca2+ release via Htrp3. The vanilloid receptor subtype 1 (VR1), which is the receptor for capsaicin (the ?hot? ingredient in chili peppers) and servesas a heat-activated ion channel in the pain pathway (Caterina et al., 1997), is also a member of this family. The stretch-inhibitable non-selective cation channel(SIC) is identical to the vanilloid receptor throughout all of its first 700 residues, but it exhibits a different sequence in its last 100 residues. VR1 and SICtransport monovalent cations as well as Ca2+. VR1 is about 10x more permeable to Ca2+ than to monovalent ions. Ca2+ overload probably causes cell deathafter chronic exposure to capsaicin. (McCleskey and Gold, 1999). [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273311 [Multi-domain]  Cd Length: 743  Bit Score: 54.70  E-value: 5.88e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056   54 LEKALDYIKNGVDVnicnqnGLNALHLASKEgHVEVVSELLQREANVDAATK--------------KGNTALHIASLAGQ 119
Cdd:TIGR00870   68 LTELLLNLSCRGAV------GDTLLHAISLE-YVDAVEAILLHLLAAFRKSGplelandqytseftPGITALHLAAHRQN 140
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  120 AEVVKVLVTNGANVNA----------QSQNGF----TPLYMAAQENHLEVVRFLLDNGASQSLATEDGFTPLavalqqgH 185
Cdd:TIGR00870  141 YEIVKLLLERGASVPAracgdffvksQGVDSFyhgeSPLNAAACLGSPSIVALLSEDPADILTADSLGNTLL-------H 213
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  186 DQVVslllENDTKGKVRLPALHIaarKDdtkaaaLLLQNDTNAD--VESKMVVNRAtesGFTPLHIAAHYGNINVATLLL 263
Cdd:TIGR00870  214 LLVM----ENEFKAEYEELSCQM---YN------FALSLLDKLRdsKELEVILNHQ---GLTPLKLAAKEGRIVLFRLKL 277

                   ..
gi 1907073056  264 NR 265
Cdd:TIGR00870  278 AI 279
ANK smart00248
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four ...
407-434 2.39e-06

ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.


Pssm-ID: 197603 [Multi-domain]  Cd Length: 30  Bit Score: 45.66  E-value: 2.39e-06
                            10        20
                    ....*....|....*....|....*...
gi 1907073056   407 NGFTPLHIACKKNRIRVMELLLKHGASI 434
Cdd:smart00248    1 DGRTPLHLAAENGNLEVVKLLLDKGADI 28
ANK smart00248
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four ...
275-304 6.83e-06

ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.


Pssm-ID: 197603 [Multi-domain]  Cd Length: 30  Bit Score: 44.12  E-value: 6.83e-06
                            10        20        30
                    ....*....|....*....|....*....|
gi 1907073056   275 NDITPLHVASKRGNANMVKLLLDRGAKIDA 304
Cdd:smart00248    1 DGRTPLHLAAENGNLEVVKLLLDKGADINA 30
Ank_4 pfam13637
Ankyrin repeats (many copies);
771-823 6.84e-06

Ankyrin repeats (many copies);


Pssm-ID: 372654 [Multi-domain]  Cd Length: 54  Bit Score: 44.96  E-value: 6.84e-06
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|...
gi 1907073056  771 GYTALHQAAQQGHTHIINVLLQNNASPNELTVNGNTALAIARRLGYISVVDTL 823
Cdd:pfam13637    1 ELTALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLL 53
ANK smart00248
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four ...
139-165 1.95e-05

ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.


Pssm-ID: 197603 [Multi-domain]  Cd Length: 30  Bit Score: 42.96  E-value: 1.95e-05
                            10        20
                    ....*....|....*....|....*..
gi 1907073056   139 NGFTPLYMAAQENHLEVVRFLLDNGAS 165
Cdd:smart00248    1 DGRTPLHLAAENGNLEVVKLLLDKGAD 27
ANK smart00248
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four ...
737-766 7.86e-05

ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.


Pssm-ID: 197603 [Multi-domain]  Cd Length: 30  Bit Score: 41.42  E-value: 7.86e-05
                            10        20        30
                    ....*....|....*....|....*....|
gi 1907073056   737 MGYTPLHVGCHYGNIKIVNFLLQHSAKVNA 766
Cdd:smart00248    1 DGRTPLHLAAENGNLEVVKLLLDKGADINA 30
trp TIGR00870
transient-receptor-potential calcium channel protein; The Transient Receptor Potential Ca2+ ...
639-819 1.67e-03

transient-receptor-potential calcium channel protein; The Transient Receptor Potential Ca2+ Channel (TRP-CC) Family (TC. 1.A.4)The TRP-CC family has also been called the store-operated calcium channel (SOC) family. The prototypical members include the Drosophila retinal proteinsTRP and TRPL (Montell and Rubin, 1989; Hardie and Minke, 1993). SOC members of the family mediate the entry of extracellular Ca2+ into cells in responseto depletion of intracellular Ca2+ stores (Clapham, 1996) and agonist stimulated production of inositol-1,4,5 trisphosphate (IP3). One member of the TRP-CCfamily, mammalian Htrp3, has been shown to form a tight complex with the IP3 receptor (TC #1.A.3.2.1). This interaction is apparently required for IP3 tostimulate Ca2+ release via Htrp3. The vanilloid receptor subtype 1 (VR1), which is the receptor for capsaicin (the ?hot? ingredient in chili peppers) and servesas a heat-activated ion channel in the pain pathway (Caterina et al., 1997), is also a member of this family. The stretch-inhibitable non-selective cation channel(SIC) is identical to the vanilloid receptor throughout all of its first 700 residues, but it exhibits a different sequence in its last 100 residues. VR1 and SICtransport monovalent cations as well as Ca2+. VR1 is about 10x more permeable to Ca2+ than to monovalent ions. Ca2+ overload probably causes cell deathafter chronic exposure to capsaicin. (McCleskey and Gold, 1999). [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273311 [Multi-domain]  Cd Length: 743  Bit Score: 43.53  E-value: 1.67e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  639 GYTPLHIAAKKNQMDIATSLLEYGADANAVtrqGIASVHLAAqEGHVDMVSLLLS-------RNANVNLSNKS------- 704
Cdd:TIGR00870   52 GRSALFVAAIENENLELTELLLNLSCRGAV---GDTLLHAIS-LEYVDAVEAILLhllaafrKSGPLELANDQytseftp 127
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  705 GLTPLHLAAQEDRVNVAEVLVNQGAHVDAQTKMG---YTPlHVGCHY------------GNIKIVNFLLQHSAKVNAKTK 769
Cdd:TIGR00870  128 GITALHLAAHRQNYEIVKLLLERGASVPARACGDffvKSQ-GVDSFYhgesplnaaaclGSPSIVALLSEDPADILTADS 206
                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907073056  770 NGYTALHQAAQQGH---------THIINVLLQNNA---SPNELTV----NGNTALAIARRLGYISV 819
Cdd:TIGR00870  207 LGNTLLHLLVMENEfkaeyeelsCQMYNFALSLLDklrDSKELEVilnhQGLTPLKLAAKEGRIVL 272
 
Name Accession Description Interval E-value
UPA_2 pfam17809
UPA domain; The UPA domain is conserved in UNC5, PIDD, and Ankyrins. It has a beta sandwich ...
1338-1467 3.32e-58

UPA domain; The UPA domain is conserved in UNC5, PIDD, and Ankyrins. It has a beta sandwich structure.


Pssm-ID: 375346  Cd Length: 131  Bit Score: 196.93  E-value: 3.32e-58
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056 1338 VPYMAKFVVFAKTNDPVESSLRCFCMTDDRVDKTLEQQENFEEVARSKDIEVLEGKPIYVDCYGNLAPLTKGGQQLVFNF 1417
Cdd:pfam17809    1 VPYLAKFVVFAKRYDPGEARLRCACMTDDGEDKTLEFHEGFTEVARSRDVEVLEGSPVSIELSGNLVPIKKKSQSRQMDF 80
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|
gi 1907073056 1418 YSFKENRLPFSIKIRDTSQEPCGRLSFLKEPKTTKGLPQTAVCNLNITLP 1467
Cdd:pfam17809   81 KAFRENRLDGSVRVKDPSDPPKGLLSFMRDAKVDGGTVSQPLCTLNIVLP 130
ZU5 smart00218
Domain present in ZO-1 and Unc5-like netrin receptors; Domain of unknown function.
1012-1116 8.95e-49

Domain present in ZO-1 and Unc5-like netrin receptors; Domain of unknown function.


Pssm-ID: 128514  Cd Length: 104  Bit Score: 169.07  E-value: 8.95e-49
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  1012 SGFLVSFMVDARGGSMRGSRHhGMRIIIPPRKCTAPTRITCRLVKRHKLANPPPMVEGEGLASRLVEMGPAGAQFLGPVI 1091
Cdd:smart00218    1 PSFLVSGTFDARGGRLRGPRT-GVRLIIPPGAIPQGTRYTCYLVVHKTLSTPPPLEEGETLLSPVVECGPHGALFLRPVI 79
                            90       100
                    ....*....|....*....|....*
gi 1907073056  1092 VEIPHFGSMRGKERELIVLRSENGE 1116
Cdd:smart00218   80 LEVPHCASLRPRDWEIVLLRSENGG 104
Death_ank3 cd08803
Death domain of Ankyrin-3; Death Domain (DD) of the human protein ankyrin-3 (ANK-3) and ...
1493-1576 6.76e-47

Death domain of Ankyrin-3; Death Domain (DD) of the human protein ankyrin-3 (ANK-3) and related proteins. Ankyrins are modular proteins comprising three conserved domains, an N-terminal membrane-binding domain containing ANK repeats, a spectrin-binding domain and a C-terminal DD. ANK-3, also called anykyrin-G (for general or giant), is found in neurons and at least one splice variant has been shown to be essential for propagation of action potentials as a binding partner to neurofascin and voltage-gated sodium channels. It is required for maintaining axo-dendritic polarity, and may be a genetic risk factor associated with bipolar disorder. ANK-3 may also play roles in other cell types. Mutations affecting ANK-3 pathways for Na channel localization are associated with Brugada syndrome, a potentially fatal arrythmia. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.


Pssm-ID: 176781  Cd Length: 84  Bit Score: 162.92  E-value: 6.76e-47
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056 1493 ERTDIRMAIVADHLGLSWTELARELNFSVDEINQIRVENPNSLISQSFMLLKKWVTRDGKNATTDALTSVLTKINRIDIV 1572
Cdd:cd08803      1 ERTDIRMAIVADHLGLSWTELARELNFSVDEINQIRVENPNSLIAQSFMLLKKWVTRDGKNATTDALTSVLTKINRIDIV 80

                   ....
gi 1907073056 1573 TLLE 1576
Cdd:cd08803     81 TLLE 84
ZU5 pfam00791
ZU5 domain; Domain present in ZO-1 and Unc5-like netrin receptors Domain of unknown function.
1016-1112 3.66e-39

ZU5 domain; Domain present in ZO-1 and Unc5-like netrin receptors Domain of unknown function.


Pssm-ID: 425872  Cd Length: 96  Bit Score: 141.11  E-value: 3.66e-39
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056 1016 VSFMVDARGGSMRGSrHHGMRIIIPPRKCTAPTRITCRLVKRHKLANPPPMVEGEGLASRLVEMGPAGAQFLGPVIVEIP 1095
Cdd:pfam00791    1 ASGLFDSRGGRLVLP-NSGVSLLIPPGAIPEGTRIEIYLAVLRDDTSRPPLEEGETLLSPVVECGPPGLKFLKPVILEIP 79
                           90
                   ....*....|....*..
gi 1907073056 1096 HFGSMRGKERELIVLRS 1112
Cdd:pfam00791   80 HCASLRPGDWEIVLKRS 96
PHA03095 PHA03095
ankyrin-like protein; Provisional
377-665 1.50e-38

ankyrin-like protein; Provisional


Pssm-ID: 222980 [Multi-domain]  Cd Length: 471  Bit Score: 151.72  E-value: 1.50e-38
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  377 TALHVAAHCGHYKVAKV---LLDKKASPNAKALNGFTPLHI-ACKKNRIRVMELLLKHGASIQAVTESGLTPIHV--AAF 450
Cdd:PHA03095    49 TPLHLYLHYSSEKVKDIvrlLLEAGADVNAPERCGFTPLHLyLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHVylSGF 128
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  451 MGHVNIVSQLMHHGASPNTTNVRGETALHMAARSGQA--EVVRYLVQDGAQVEAKAKDDQTPLHISARLGK--ADIVQQL 526
Cdd:PHA03095   129 NINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNAnvELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKprARIVREL 208
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  527 LQQGASPNAATTSGYTPLHLAAREGHED--VAAFLLDHGASLSITTKKGFTPLHVAAKYGKLEVASLLLQKSASPDAAGK 604
Cdd:PHA03095   209 IRAGCDPAATDMLGNTPLHSMATGSSCKrsLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSS 288
                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907073056  605 SGLTPLHVAAHYDNQKVALLLLDQGASPHAAAK-------NGYTPLhIAAKKNQMdiATSLLEYGADA 665
Cdd:PHA03095   289 DGNTPLSLMVRNNNGRAVRAALAKNPSAETVAAtlntasvAGGDIP-SDATRLCV--AKVVLRGAFSL 353
PHA03100 PHA03100
ankyrin repeat protein; Provisional
559-796 3.26e-37

ankyrin repeat protein; Provisional


Pssm-ID: 222984 [Multi-domain]  Cd Length: 422  Bit Score: 146.73  E-value: 3.26e-37
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  559 LLDHGASLSITTKKGFTPLHVAAKYGKLEVASLLLQKSASPDAAGKSGLTPLHVAAHY-----DNQKVALLLLDQGASPH 633
Cdd:PHA03100    21 IIMEDDLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIkynltDVKEIVKLLLEYGANVN 100
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  634 AAAKNGYTPLHIAA--KKNQMDIATSLLEYGADANAVTRQGIASVHLAAQEGHVD--MVSLLLSRNANVNlsnksgltpl 709
Cdd:PHA03100   101 APDNNGITPLLYAIskKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDlkILKLLIDKGVDIN---------- 170
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  710 hlaaQEDRVNVaevLVNQGAHVDAQTKMGYTPLHVGCHYGNIKIVNFLLQHSAKVNAKTKNGYTALHQAAQQGHTHIINV 789
Cdd:PHA03100   171 ----AKNRVNY---LLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKL 243

                   ....*..
gi 1907073056  790 LLQNNAS 796
Cdd:PHA03100   244 LLNNGPS 250
PHA02876 PHA02876
ankyrin repeat protein; Provisional
417-764 1.75e-35

ankyrin repeat protein; Provisional


Pssm-ID: 165207 [Multi-domain]  Cd Length: 682  Bit Score: 145.98  E-value: 1.75e-35
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  417 KKNRIRVMELLLKHGASIQAVTESGLTPIHVAAFMGHVNIVSQLMHHGASPNTTNVRGETALHMAARSGQAEVVRYLVQD 496
Cdd:PHA02876   154 QQDELLIAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKNIDTIKAIIDN 233
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  497 GAQVEakaKDDqtpLHISARLGKADIVQQLL--QQGASPNAATTSGYTPLHLAAREGH-EDVAAFLLDHGASLSITTKKG 573
Cdd:PHA02876   234 RSNIN---KND---LSLLKAIRNEDLETSLLlyDAGFSVNSIDDCKNTPLHHASQAPSlSRLVPKLLERGADVNAKNIKG 307
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  574 FTPLHVAAKYG-KLEVASLLLQKSASPDAAGKSGLTPLHVAAHYD-NQKVALLLLDQGASPHAAAKNGYTPLHIAAKKNQ 651
Cdd:PHA02876   308 ETPLYLMAKNGyDTENIRTLIMLGADVNAADRLYITPLHQASTLDrNKDIVITLLELGANVNARDYCDKTPIHYAAVRNN 387
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  652 MDIATSLLEYGADANAVTRQGIASVHLAAQEGHVDM-VSLLLSRNANVNLSNKSGLTPLHLAAQED-RVNVAEVLVNQGA 729
Cdd:PHA02876   388 VVIINTLLDYGADIEALSQKIGTALHFALCGTNPYMsVKTLIDRGANVNSKNKDLSTPLHYACKKNcKLDVIEMLLDNGA 467
                          330       340       350
                   ....*....|....*....|....*....|....*
gi 1907073056  730 HVDAQTKMGYTPLHVGCHYGNikIVNFLLQHSAKV 764
Cdd:PHA02876   468 DVNAINIQNQYPLLIALEYHG--IVNILLHYGAEL 500
PHA03095 PHA03095
ankyrin-like protein; Provisional
414-733 6.50e-34

ankyrin-like protein; Provisional


Pssm-ID: 222980 [Multi-domain]  Cd Length: 471  Bit Score: 137.85  E-value: 6.50e-34
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  414 IACKKNRIRVMELLLKHGASIQAVTESGLTPIHVaaFMGH-----VNIVSQLMHHGASPNTTNVRGETALHMAARSGQ-A 487
Cdd:PHA03095    20 LNASNVTVEEVRRLLAAGADVNFRGEYGKTPLHL--YLHYssekvKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATtL 97
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  488 EVVRYLVQDGAQVEAKAKDDQTPLHISARlGK---ADIVQQLLQQGASPNAATTSGYTPLHLAAREGHEDVA--AFLLDH 562
Cdd:PHA03095    98 DVIKLLIKAGADVNAKDKVGRTPLHVYLS-GFninPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNANVEllRLLIDA 176
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  563 GASLSITTKKGFTPLHVAAKYGKL--EVASLLLQKSASPDAAGKSGLTPLHVAAHYDNQKVALL--LLDQGASPHAAAKN 638
Cdd:PHA03095   177 GADVYAVDDRFRSLLHHHLQSFKPraRIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVlpLLIAGISINARNRY 256
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  639 GYTPLHIAAKKNQMDIATSLLEYGADANAVTRQGIASVHLAAQEGHVDMVSLLLSRNANVNL--------SNKSGLTPLH 710
Cdd:PHA03095   257 GQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNNGRAVRAALAKNPSAETvaatlntaSVAGGDIPSD 336
                          330       340
                   ....*....|....*....|...
gi 1907073056  711 LAaqedRVNVAEVLVNQGAHVDA 733
Cdd:PHA03095   337 AT----RLCVAKVVLRGAFSLLP 355
Death_ank1 cd08805
Death domain of Ankyrin-1; Death Domain (DD) of the human protein ankyrin-1 (ANK-1) and ...
1493-1576 1.42e-33

Death domain of Ankyrin-1; Death Domain (DD) of the human protein ankyrin-1 (ANK-1) and related proteins. Ankyrins are modular proteins comprising three conserved domains, an N-terminal membrane-binding domain containing ANK repeats, a spectrin-binding domain and a C-terminal DD. ANK-1, also called ankyrin-R (for restricted), is found in brain, muscle, and erythrocytes and is thought to function in linking integral membrane proteins to the underlying cytoskeleton. It plays a critical nonredundant role in erythroid development and is associated with hereditary spherocytosis (HS), a common disorder of the red cell membrane. The small alternatively-spliced variant, sANK-1, found in striated muscle and concentrated in the sarcoplasmic reticulum (SR) binds obscurin and titin, which facilitates the anchoring of the network SR to the contractile apparatus. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.


Pssm-ID: 260067  Cd Length: 84  Bit Score: 124.70  E-value: 1.42e-33
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056 1493 ERTDIRMAIVADHLGLSWTELARELNFSVDEINQIRVENPNSLISQSFMLLKKWVTRDGKNATTDALTSVLTKINRIDIV 1572
Cdd:cd08805      1 ERVEMKMAVIREHLGLSWAELARELQFSVEDINRIRVENPNSLLEQSTALLNLWVDREGENAKMEPLYPALYSIDRLTIV 80

                   ....
gi 1907073056 1573 TLLE 1576
Cdd:cd08805     81 NILE 84
PHA03095 PHA03095
ankyrin-like protein; Provisional
487-768 5.16e-33

ankyrin-like protein; Provisional


Pssm-ID: 222980 [Multi-domain]  Cd Length: 471  Bit Score: 135.15  E-value: 5.16e-33
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  487 AEVVRYLVQDGAQVEAKAKDDQTPLHISARLGK---ADIVQQLLQQGASPNAATTSGYTPLHLAAREGH-EDVAAFLLDH 562
Cdd:PHA03095    27 VEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSekvKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATtLDVIKLLIKA 106
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  563 GASLSITTKKGFTPLHV--AAKYGKLEVASLLLQKSASPDAAGKSGLTPLHVAAHYDNQKVALL--LLDQGASPHAAAKN 638
Cdd:PHA03095   107 GADVNAKDKVGRTPLHVylSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNANVELLrlLIDAGADVYAVDDR 186
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  639 GYTPLHIAA---KKNQmDIATSLLEYGADANAVTRQGIASVHLAAQEG---HVDMVSLLLsRNANVNLSNKSGLTPLHLA 712
Cdd:PHA03095   187 FRSLLHHHLqsfKPRA-RIVRELIRAGCDPAATDMLGNTPLHSMATGSsckRSLVLPLLI-AGISINARNRYGQTPLHYA 264
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 1907073056  713 AQEDRVNVAEVLVNQGAHVDAQTKMGYTPLHVGCHYGNIKIVNFLL--QHSAKVNAKT 768
Cdd:PHA03095   265 AVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNNGRAVRAALakNPSAETVAAT 322
Death_ank cd08317
Death domain associated with Ankyrins; Death Domain (DD) associated with Ankyrins. Ankyrins ...
1493-1576 6.71e-33

Death domain associated with Ankyrins; Death Domain (DD) associated with Ankyrins. Ankyrins are modular proteins comprising three conserved domains, an N-terminal membrane-binding domain containing ANK repeats, a spectrin-binding domain and a C-terminal DD. Ankyrins function as adaptor proteins and they interact, through ANK repeats, with structurally diverse membrane proteins, including ion channels/pumps, calcium release channels, and cell adhesion molecules. They play critical roles in the proper expression and membrane localization of these proteins. In mammals, this family includes ankyrin-R for restricted (or ANK1), ankyrin-B for broadly expressed (or ANK2) and ankyrin-G for general or giant (or ANK3). They are expressed in different combinations in many tissues and play non-overlapping functions. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.


Pssm-ID: 260029  Cd Length: 84  Bit Score: 122.76  E-value: 6.71e-33
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056 1493 ERTDIRMAIVADHLGLSWTELARELNFSVDEINQIRVENPNSLISQSFMLLKKWVTRDGKNATTDALTSVLTKINRIDIV 1572
Cdd:cd08317      1 HRADLRLSDIANLLGSDWPELARELGVSEEDIDLIRSENPNSLAQQAMAMLRLWLEREGEKATGNALESALKKIGRDDIV 80

                   ....
gi 1907073056 1573 TLLE 1576
Cdd:cd08317     81 EKCE 84
PHA03100 PHA03100
ankyrin repeat protein; Provisional
252-502 1.48e-32

ankyrin repeat protein; Provisional


Pssm-ID: 222984 [Multi-domain]  Cd Length: 422  Bit Score: 132.87  E-value: 1.48e-32
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  252 HYGNINVATL--LLNRAAAVDFTARNDITPLHVASKRGNANMVKLLLDRGAKIDAKTRDGLTPLHCGARSGHEQ-----V 324
Cdd:PHA03100     9 KSRIIKVKNIkyIIMEDDLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLtdvkeI 88
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  325 VEMLLDRSAPILSKTKNGLSPLHMA--TQGDHLNCVQLLLQHNVPVDDVTNDYLTALHVAAHCGHY--KVAKVLLDKKAS 400
Cdd:PHA03100    89 VKLLLEYGANVNAPDNNGITPLLYAisKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIdlKILKLLIDKGVD 168
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  401 PNAkalngftplhiackKNRIrvmELLLKHGASIQAVTESGLTPIHVAAFMGHVNIVSQLMHHGASPNTTNVRGETALHM 480
Cdd:PHA03100   169 INA--------------KNRV---NYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHI 231
                          250       260
                   ....*....|....*....|..
gi 1907073056  481 AARSGQAEVVRYLVQDGAQVEA 502
Cdd:PHA03100   232 AILNNNKEIFKLLLNNGPSIKT 253
PHA03100 PHA03100
ankyrin repeat protein; Provisional
608-817 3.52e-32

ankyrin repeat protein; Provisional


Pssm-ID: 222984 [Multi-domain]  Cd Length: 422  Bit Score: 131.71  E-value: 3.52e-32
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  608 TPLHVAAHYDNQKVALLLLDQGASPHAAAKNGYTPLHIAA-----KKNQMDIATSLLEYGADANAVTRQGIASVHLAAQE 682
Cdd:PHA03100    37 LPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSnikynLTDVKEIVKLLLEYGANVNAPDNNGITPLLYAISK 116
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  683 --GHVDMVSLLLSRNANVNLSNKSGLTPLHLAAQ--EDRVNVAEVLVNQGAHVDAQTKmgytplhvgchygnikiVNFLL 758
Cdd:PHA03100   117 ksNSYSIVEYLLDNGANVNIKNSDGENLLHLYLEsnKIDLKILKLLIDKGVDINAKNR-----------------VNYLL 179
                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907073056  759 QHSAKVNAKTKNGYTALHQAAQQGHTHIINVLLQNNASPNELTVNGNTAL--AIARRLGYI 817
Cdd:PHA03100   180 SYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLhiAILNNNKEI 240
PHA03100 PHA03100
ankyrin repeat protein; Provisional
195-437 5.34e-31

ankyrin repeat protein; Provisional


Pssm-ID: 222984 [Multi-domain]  Cd Length: 422  Bit Score: 128.24  E-value: 5.34e-31
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  195 NDTKGKVRLPALHIAARKDDTKAAALLLqnDTNADVESKMVVNratesgFTPLHIAAHYG-----NINVATLLLNRAAAV 269
Cdd:PHA03100    28 NDYSYKKPVLPLYLAKEARNIDVVKILL--DNGADINSSTKNN------STPLHYLSNIKynltdVKEIVKLLLEYGANV 99
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  270 DFTARNDITPLHVAS--KRGNANMVKLLLDRGAKIDAKTRDGLTPLHCGARSGHE--QVVEMLLDRSAPILSKTKnglsp 345
Cdd:PHA03100   100 NAPDNNGITPLLYAIskKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIdlKILKLLIDKGVDINAKNR----- 174
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  346 lhmatqgdhlncVQLLLQHNVPVDDVTNDYLTALHVAAHCGHYKVAKVLLDKKASPNAKALNGFTPLHIACKKNRIRVME 425
Cdd:PHA03100   175 ------------VNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFK 242
                          250
                   ....*....|..
gi 1907073056  426 LLLKHGASIQAV 437
Cdd:PHA03100   243 LLLNNGPSIKTI 254
PHA03100 PHA03100
ankyrin repeat protein; Provisional
245-469 5.75e-31

ankyrin repeat protein; Provisional


Pssm-ID: 222984 [Multi-domain]  Cd Length: 422  Bit Score: 127.86  E-value: 5.75e-31
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  245 TPLHIAAHYGNINVATLLLNRAAAVDFTARNDITPLH-----VASKRGNANMVKLLLDRGAKIDAKTRDGLTPLHCGA-- 317
Cdd:PHA03100    37 LPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHylsniKYNLTDVKEIVKLLLEYGANVNAPDNNGITPLLYAIsk 116
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  318 RSGHEQVVEMLLDRSAPILSKTKNGLSPLHMATQGDH--LNCVQLLLQHNVPVDDVTN-DYLtalhvaahcghykvakvl 394
Cdd:PHA03100   117 KSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKidLKILKLLIDKGVDINAKNRvNYL------------------ 178
                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1907073056  395 LDKKASPNAKALNGFTPLHIACKKNRIRVMELLLKHGASIQAVTESGLTPIHVAAFMGHVNIVSQLMHHGASPNT 469
Cdd:PHA03100   179 LSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPSIKT 253
PHA02876 PHA02876
ankyrin repeat protein; Provisional
258-664 1.11e-30

ankyrin repeat protein; Provisional


Pssm-ID: 165207 [Multi-domain]  Cd Length: 682  Bit Score: 130.95  E-value: 1.11e-30
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  258 VATLLLNRAAAVDFTARNDITPLHVASKRGNANMVKLLLDRGAKIDAKTRDGLTPLHCGARSGHEQVVEMLLDRSAPIls 337
Cdd:PHA02876   160 IAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKNIDTIKAIIDNRSNI-- 237
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  338 kTKNGLSPLHMATQGDhlncvqlllqhnvpvddvtndyltalhvaahcghYKVAKVLLDKKASPNAKALNGFTPLHIAck 417
Cdd:PHA02876   238 -NKNDLSLLKAIRNED----------------------------------LETSLLLYDAGFSVNSIDDCKNTPLHHA-- 280
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  418 knrirvmelllkhgasIQAVTESGLTPihvaafmghvnivsQLMHHGASPNTTNVRGETALHMAARSG-QAEVVRYLVQD 496
Cdd:PHA02876   281 ----------------SQAPSLSRLVP--------------KLLERGADVNAKNIKGETPLYLMAKNGyDTENIRTLIML 330
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  497 GAQVEAKAKDDQTPLHISARLGK-ADIVQQLLQQGASPNAATTSGYTPLHLAAREGHEDVAAFLLDHGASLSITTKKGFT 575
Cdd:PHA02876   331 GADVNAADRLYITPLHQASTLDRnKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGT 410
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  576 PLHVAAkYGKLEVASL--LLQKSASPDAAGKSGLTPLHVAAHYDNQ-KVALLLLDQGASPHAAAKNGYTPLHIAAKKNqm 652
Cdd:PHA02876   411 ALHFAL-CGTNPYMSVktLIDRGANVNSKNKDLSTPLHYACKKNCKlDVIEMLLDNGADVNAINIQNQYPLLIALEYH-- 487
                          410
                   ....*....|..
gi 1907073056  653 DIATSLLEYGAD 664
Cdd:PHA02876   488 GIVNILLHYGAE 499
PHA02874 PHA02874
ankyrin repeat protein; Provisional
293-604 4.11e-30

ankyrin repeat protein; Provisional


Pssm-ID: 165205 [Multi-domain]  Cd Length: 434  Bit Score: 125.85  E-value: 4.11e-30
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  293 KLLLDRGAKIDAKTRDGLTPLHCGARSGHEQVVEMLLDRSAPILSKTKNGLSPLHMATQGDHLNCVQLLLQHNV-----P 367
Cdd:PHA02874    19 KIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDIIKLLIDNGVdtsilP 98
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  368 VDDVTNDYLtalhvaahcghykvaKVLLDKKASPNAKALNGFTPLHIACKKNRIRVMELLLKHGASIQAVTESGLTPIHV 447
Cdd:PHA02874    99 IPCIEKDMI---------------KTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHI 163
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  448 AAFMGHVNIVSQLMHHGASPNTTNVRGETALHMAARSGQAEVVRYLVQDGAQVEAKAKDDQTPLHISARLGKADIvqQLL 527
Cdd:PHA02874   164 AIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNRSAI--ELL 241
                          250       260       270       280       290       300       310
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907073056  528 QQGASPNAATTSGYTPLHLAAR-EGHEDVAAFLLDHGASLSITTKKGFTPLHVAAKY-GKLEVASLLLQKSASPDAAGK 604
Cdd:PHA02874   242 INNASINDQDIDGSTPLHHAINpPCDIDIIDILLYHKADISIKDNKGENPIDTAFKYiNKDPVIKDIIANAVLIKEADK 320
PHA03100 PHA03100
ankyrin repeat protein; Provisional
410-671 8.28e-30

ankyrin repeat protein; Provisional


Pssm-ID: 222984 [Multi-domain]  Cd Length: 422  Bit Score: 124.39  E-value: 8.28e-30
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  410 TPLHIACKKNRIRVMELLLKHGASIQAVTESGLTPIHvaafmghvnIVSQLMHhgaspNTTNVRgetalhmaarsgqaEV 489
Cdd:PHA03100    37 LPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLH---------YLSNIKY-----NLTDVK--------------EI 88
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  490 VRYLVQDGAQVEAKAKDDQTPLH--ISARLGKADIVQQLLQQGASPNAATTSGYTPLHLAAREGHED--VAAFLLDHGAS 565
Cdd:PHA03100    89 VKLLLEYGANVNAPDNNGITPLLyaISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDlkILKLLIDKGVD 168
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  566 LSITTKkgftplhvaakygklevASLLLQKSASPDAAGKSGLTPLHVAAHYDNQKVALLLLDQGASPHAAAKNGYTPLHI 645
Cdd:PHA03100   169 INAKNR-----------------VNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHI 231
                          250       260
                   ....*....|....*....|....*.
gi 1907073056  646 AAKKNQMDIATSLLEYGADANAVTRQ 671
Cdd:PHA03100   232 AILNNNKEIFKLLLNNGPSIKTIIET 257
Death_ank2 cd08804
Death domain of Ankyrin-2; Death Domain (DD) of Ankyrin-2 (ANK-2) and related proteins. ...
1493-1576 1.22e-28

Death domain of Ankyrin-2; Death Domain (DD) of Ankyrin-2 (ANK-2) and related proteins. Ankyrins are modular proteins comprising three conserved domains, an N-terminal membrane-binding domain containing ANK repeats, a spectrin-binding domain and a C-terminal DD. ANK-2, also called ankyrin-B (for broadly expressed), is required for proper function of the Na/Ca ion exchanger-1 in cardiomyocytes, and is thought to function in linking integral membrane proteins to the underlying cytoskeleton. Human ANK-2 is associated with "Ankyrin-B syndrome", an atypical arrythmia disorder with risk of sudden cardiac death. It also plays key roles in the brain and striated muscle. Loss of ANK-2 is associated with significant nervous system defects and sarcomere disorganization. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.


Pssm-ID: 260066  Cd Length: 84  Bit Score: 110.56  E-value: 1.22e-28
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056 1493 ERTDIRMAIVADHLGLSWTELARELNFSVDEINQIRVENPNSLISQSFMLLKKWVTRDGKNATTDALTSVLTKINRIDIV 1572
Cdd:cd08804      1 ERTEERLAHIADHLGFSWTELARELDFTEEQIHQIRIENPNSLQDQSHALLKYWLERDGKHATDTNLTQCLTKINRMDIV 80

                   ....
gi 1907073056 1573 TLLE 1576
Cdd:cd08804     81 HLME 84
PHA02876 PHA02876
ankyrin repeat protein; Provisional
489-823 8.53e-28

ankyrin repeat protein; Provisional


Pssm-ID: 165207 [Multi-domain]  Cd Length: 682  Bit Score: 121.71  E-value: 8.53e-28
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  489 VVRYLVQDGAQVEAKAKDDQTPLHISARLGKADIVQQLLQQGASPNAATTSGYTPLHLAAREGHEDVAAFLLDHGASLSi 568
Cdd:PHA02876   160 IAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKNIDTIKAIIDNRSNIN- 238
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  569 ttkKGFTPLHVAAKYGKLEVASLLLQKSASPDAAGKSGLTPLHVAAHYDN-QKVALLLLDQGASPHAAAKNGYTPLHIAA 647
Cdd:PHA02876   239 ---KNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSlSRLVPKLLERGADVNAKNIKGETPLYLMA 315
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  648 KkNQMDIAT--SLLEYGADANAVTRQGIASVHLAAQ-EGHVDMVSLLLSRNANVNLSNKSGLTPLHLAAQEDRVNVAEVL 724
Cdd:PHA02876   316 K-NGYDTENirTLIMLGADVNAADRLYITPLHQASTlDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTL 394
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  725 VNQGAHVDAQTKMGYTPLHVG-CHYGNIKIVNFLLQHSAKVNAKTKNGYTALHQAAQQG-HTHIINVLLQNNASPNELTV 802
Cdd:PHA02876   395 LDYGADIEALSQKIGTALHFAlCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNcKLDVIEMLLDNGADVNAINI 474
                          330       340
                   ....*....|....*....|.
gi 1907073056  803 NGNTALAIArrLGYISVVDTL 823
Cdd:PHA02876   475 QNQYPLLIA--LEYHGIVNIL 493
PHA02875 PHA02875
ankyrin repeat protein; Provisional
475-700 1.78e-27

ankyrin repeat protein; Provisional


Pssm-ID: 165206 [Multi-domain]  Cd Length: 413  Bit Score: 117.40  E-value: 1.78e-27
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  475 ETALHMAARSGQAEVVRYLVQDGAQVEAKAKDDQTPLHISARLGKADIVQQLLQQGASPNAATTSGYTPLHLAAREGHED 554
Cdd:PHA02875     3 QVALCDAILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDVK 82
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  555 VAAFLLDHGASLS-ITTKKGFTPLHVAAKYGKLEVASLLLQKSASPDAAGKSGLTPLHVAAHYDNQKVALLLLDQGASPH 633
Cdd:PHA02875    83 AVEELLDLGKFADdVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLD 162
                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907073056  634 AAAKNGYTPLHIAAKKNQMDIATSLLEYGADANAVTRQG-IASVHLAAQEGHVDMVSLLLSRNANVNL 700
Cdd:PHA02875   163 IEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGcVAALCYAIENNKIDIVRLFIKRGADCNI 230
PHA02876 PHA02876
ankyrin repeat protein; Provisional
211-566 2.90e-27

ankyrin repeat protein; Provisional


Pssm-ID: 165207 [Multi-domain]  Cd Length: 682  Bit Score: 120.17  E-value: 2.90e-27
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  211 RKDDTKAAALLLQNdtNADVESKMVVNRatesgfTPLHIAAHYGNINVATLLLNRAAAVDFTARNDITPLHVASKRGNAN 290
Cdd:PHA02876   154 QQDELLIAEMLLEG--GADVNAKDIYCI------TPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKNID 225
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  291 MVKLLLDRGAKIDaktRDGLTPLHCGARSGHEQVVeMLLDRSAPILSKTKNGLSPLHMATQGDHLN-CVQLLLQHNVPVD 369
Cdd:PHA02876   226 TIKAIIDNRSNIN---KNDLSLLKAIRNEDLETSL-LLYDAGFSVNSIDDCKNTPLHHASQAPSLSrLVPKLLERGADVN 301
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  370 DVTNDYLTALHVAAHCGH-YKVAKVLLDKKASPNAKALNGFTPLHIACKKNRIR-VMELLLKHGASIQAVTESGLTPIHV 447
Cdd:PHA02876   302 AKNIKGETPLYLMAKNGYdTENIRTLIMLGADVNAADRLYITPLHQASTLDRNKdIVITLLELGANVNARDYCDKTPIHY 381
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  448 AAFMGHVNIVSQLMHHGASPNTTNVRGETALHMAARSGQAEV-VRYLVQDGAQVEAKAKDDQTPLHISARLG-KADIVQQ 525
Cdd:PHA02876   382 AAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYMsVKTLIDRGANVNSKNKDLSTPLHYACKKNcKLDVIEM 461
                          330       340       350       360
                   ....*....|....*....|....*....|....*....|.
gi 1907073056  526 LLQQGASPNAATTSGYTPLHLAAreGHEDVAAFLLDHGASL 566
Cdd:PHA02876   462 LLDNGADVNAINIQNQYPLLIAL--EYHGIVNILLHYGAEL 500
PHA02874 PHA02874
ankyrin repeat protein; Provisional
410-668 2.92e-27

ankyrin repeat protein; Provisional


Pssm-ID: 165205 [Multi-domain]  Cd Length: 434  Bit Score: 117.37  E-value: 2.92e-27
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  410 TPLHIACKKNRIRVMELLLKHGASIQAVTESGLTPIHVAAFMGHVNIVSQLMHHGASP---------------------- 467
Cdd:PHA02874    37 TPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTsilpipciekdmiktildcgid 116
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  468 -NTTNVRGETALHMAARSGQAEVVRYLVQDGAQVEAKAKDDQTPLHISARLGKADIVQQLLQQGASPNAATTSGYTPLHL 546
Cdd:PHA02874   117 vNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHN 196
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  547 AAREGHEDVAAFLLDHGASLSITTKKGFTPLHVAAKYGKLEVAslLLQKSASPDAAGKSGLTPLHVAAHYDNQK-VALLL 625
Cdd:PHA02874   197 AAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNRSAIE--LLINNASINDQDIDGSTPLHHAINPPCDIdIIDIL 274
                          250       260       270       280
                   ....*....|....*....|....*....|....*....|....
gi 1907073056  626 LDQGASPHAAAKNGYTPLHIAAKK-NQMDIATSLLeygadANAV 668
Cdd:PHA02874   275 LYHKADISIKDNKGENPIDTAFKYiNKDPVIKDII-----ANAV 313
PHA02876 PHA02876
ankyrin repeat protein; Provisional
83-465 3.87e-27

ankyrin repeat protein; Provisional


Pssm-ID: 165207 [Multi-domain]  Cd Length: 682  Bit Score: 119.78  E-value: 3.87e-27
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056   83 KEGHVEVVSELLQREANVDAATKKGNTALHIASLAGQAEVVKVLVTNGANVNAQSQNGFTPLYMAAQENHLEVVRFLLDN 162
Cdd:PHA02876   154 QQDELLIAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKNIDTIKAIIDN 233
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  163 GASqslatedgftplavalqqghdqvvslLLENDTkgkvrlpALHIAARKDDTKAAALLLqndtnadvESKMVVNRATES 242
Cdd:PHA02876   234 RSN--------------------------INKNDL-------SLLKAIRNEDLETSLLLY--------DAGFSVNSIDDC 272
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  243 GFTPLHIAAHYGNIN-VATLLLNRAAAVDFTARNDITPLHVASKRG-NANMVKLLLDRGAKIDAKTRDGLTPLHCGAR-S 319
Cdd:PHA02876   273 KNTPLHHASQAPSLSrLVPKLLERGADVNAKNIKGETPLYLMAKNGyDTENIRTLIMLGADVNAADRLYITPLHQASTlD 352
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  320 GHEQVVEMLLDRSAPILSKTKNGLSPLHMATQGDHLNCVQLLLQHNVPVDDVTNDYLTALHVAAhCGH--YKVAKVLLDK 397
Cdd:PHA02876   353 RNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFAL-CGTnpYMSVKTLIDR 431
                          330       340       350       360       370       380
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907073056  398 KASPNAKALNGFTPLHIACKKN-RIRVMELLLKHGASIQAVTESGLTPIHVAafMGHVNIVSQLMHHGA 465
Cdd:PHA02876   432 GANVNSKNKDLSTPLHYACKKNcKLDVIEMLLDNGADVNAINIQNQYPLLIA--LEYHGIVNILLHYGA 498
PHA02875 PHA02875
ankyrin repeat protein; Provisional
250-480 1.50e-26

ankyrin repeat protein; Provisional


Pssm-ID: 165206 [Multi-domain]  Cd Length: 413  Bit Score: 114.70  E-value: 1.50e-26
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  250 AAHYGNINVATLLLNRAAAVDFTARNDITPLHVASKRGNANMVKLLLDRGAKIDAKTRDGLTPLHCGARSGHEQVVEMLL 329
Cdd:PHA02875     9 AILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDVKAVEELL 88
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  330 DRSAPILSKT-KNGLSPLHMATQGDHLNCVQLLLQHNVPVDDVTNDYLTALHVAAHCGHYKVAKVLLDKKASPNAKALNG 408
Cdd:PHA02875    89 DLGKFADDVFyKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCG 168
                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907073056  409 FTPLHIACKKNRIRVMELLLKHGASIQAVTESG-LTPIHVAAFMGHVNIVSQLMHHGASPN-TTNVRGE--TALHM 480
Cdd:PHA02875   169 CTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGcVAALCYAIENNKIDIVRLFIKRGADCNiMFMIEGEecTILDM 244
PHA03095 PHA03095
ankyrin-like protein; Provisional
60-335 2.43e-26

ankyrin-like protein; Provisional


Pssm-ID: 222980 [Multi-domain]  Cd Length: 471  Bit Score: 115.12  E-value: 2.43e-26
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056   60 YIKNGVDVNICNQNGLNALHLASKEGH---VEVVSELLQREANVDAATKKGNTALHI-ASLAGQAEVVKVLVTNGANVNA 135
Cdd:PHA03095    33 LLAAGADVNFRGEYGKTPLHLYLHYSSekvKDIVRLLLEAGADVNAPERCGFTPLHLyLYNATTLDVIKLLIKAGADVNA 112
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  136 QSQNGFTPL--YMAAQENHLEVVRFLLDNGASQSLATEDGFTPLAVALQQGH--DQVVSLLLEND----TKGKVRLPALH 207
Cdd:PHA03095   113 KDKVGRTPLhvYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNanVELLRLLIDAGadvyAVDDRFRSLLH 192
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  208 IaarkddtkaaalLLQN-DTNADVESKMVV-----NRATESGFTPLHIAAHYG---NINVATLLLNrAAAVDFTARNDIT 278
Cdd:PHA03095   193 H------------HLQSfKPRARIVRELIRagcdpAATDMLGNTPLHSMATGSsckRSLVLPLLIA-GISINARNRYGQT 259
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 1907073056  279 PLHVASKRGNANMVKLLLDRGAKIDAKTRDGLTPLHCGARSGHEQVVEMLLDRSAPI 335
Cdd:PHA03095   260 PLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNNGRAVRAALAKNPSA 316
PHA02874 PHA02874
ankyrin repeat protein; Provisional
478-778 4.74e-26

ankyrin repeat protein; Provisional


Pssm-ID: 165205 [Multi-domain]  Cd Length: 434  Bit Score: 113.52  E-value: 4.74e-26
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  478 LHMAARSGQAEVVRYLVQD-GAQVEAKAKDDQTPLHISARLGKADIVQQLLQQGASPNAATTSGYTPLHLAAREGHEDVA 556
Cdd:PHA02874     5 LRMCIYSGDIEAIEKIIKNkGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDII 84
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  557 AFLLDHGASLSITtkkgftPLHVAAKygklEVASLLLQKSASPDAAGKSGLTPLHVAAHYDNQKVALLLLDQGASPHAAA 636
Cdd:PHA02874    85 KLLIDNGVDTSIL------PIPCIEK----DMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIED 154
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  637 KNGYTPLHIAAKKNQMDIATSLLEYGADANAVTRQGIASVHLAAQEGHVDMVSLLLSRNANVNLSNKSGLTPLHLAAQED 716
Cdd:PHA02874   155 DNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHN 234
                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907073056  717 RvNVAEVLVNQgAHVDAQTKMGYTPLHVGCHYG-NIKIVNFLLQHSAKVNAKTKNGYTALHQA 778
Cdd:PHA02874   235 R-SAIELLINN-ASINDQDIDGSTPLHHAINPPcDIDIIDILLYHKADISIKDNKGENPIDTA 295
DEATH smart00005
DEATH domain, found in proteins involved in cell death (apoptosis); Alpha-helical domain ...
1492-1578 6.54e-26

DEATH domain, found in proteins involved in cell death (apoptosis); Alpha-helical domain present in a variety of proteins with apoptotic functions. Some (but not all) of these domains form homotypic and heterotypic dimers.


Pssm-ID: 214467 [Multi-domain]  Cd Length: 88  Bit Score: 102.87  E-value: 6.54e-26
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  1492 CERTDIRMAIVADH-LGLSWTELARELNFSVDEINQIRVENPNSLISQSFMLLKKWVTRDGKNATTDALTSVLTKINRID 1570
Cdd:smart00005    1 PELTRQKLAKLLDHpLGLDWRELARKLGLSEADIDQIRTEAPRDLAEQSVQLLRLWEQREGKNATLGTLLEALRKMGRDD 80

                    ....*...
gi 1907073056  1571 IVTLLEGP 1578
Cdd:smart00005   81 AVELLRSE 88
PHA03100 PHA03100
ankyrin repeat protein; Provisional
59-304 3.05e-25

ankyrin repeat protein; Provisional


Pssm-ID: 222984 [Multi-domain]  Cd Length: 422  Bit Score: 110.91  E-value: 3.05e-25
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056   59 DYIKNGVDVNICNQNGLNA-----------------LHLASKEGHVEVVSELLQREANVDAATKKGNTALHIASLAGQA- 120
Cdd:PHA03100     3 SYIVLTKSRIIKVKNIKYIimeddlndysykkpvlpLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNl 82
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  121 ----EVVKVLVTNGANVNAQSQNGFTPLYMAAQE--NHLEVVRFLLDNGASQSLATEDGFTPLAVALQQGHD--QVVSLL 192
Cdd:PHA03100    83 tdvkEIVKLLLEYGANVNAPDNNGITPLLYAISKksNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIdlKILKLL 162
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  193 LEN----DTKGKVRlpalhiaarkddtkaaaLLLQNDTNADVESKMvvnratesGFTPLHIAAHYGNINVATLLLNRAAA 268
Cdd:PHA03100   163 IDKgvdiNAKNRVN-----------------YLLSYGVPINIKDVY--------GFTPLHYAVYNNNPEFVKYLLDLGAN 217
                          250       260       270
                   ....*....|....*....|....*....|....*.
gi 1907073056  269 VDFTARNDITPLHVASKRGNANMVKLLLDRGAKIDA 304
Cdd:PHA03100   218 PNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPSIKT 253
PHA02874 PHA02874
ankyrin repeat protein; Provisional
214-483 4.91e-25

ankyrin repeat protein; Provisional


Pssm-ID: 165205 [Multi-domain]  Cd Length: 434  Bit Score: 110.44  E-value: 4.91e-25
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  214 DTKAAALLLQNDTNadveskmVVNRATESGFTPLHIAAHYGNINVATLLLNRAAAVDFTARNDITPLHVASKRGNANMVK 293
Cdd:PHA02874    13 DIEAIEKIIKNKGN-------CINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDIIK 85
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  294 LLLDRGA-----------------------KIDAKTRDGLTPLHCGARSGHEQVVEMLLDRSAPILSKTKNGLSPLHMAT 350
Cdd:PHA02874    86 LLIDNGVdtsilpipciekdmiktildcgiDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAI 165
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  351 QGDHLNCVQLLLQhNVPVDDVTNDYL-TALHVAAHCGHYKVAKVLLDKKASPNAKALNGFTPLHIACKKNRiRVMELLLK 429
Cdd:PHA02874   166 KHNFFDIIKLLLE-KGAYANVKDNNGeSPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNR-SAIELLIN 243
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 1907073056  430 HgASIQAVTESGLTPIHVA-AFMGHVNIVSQLMHHGASPNTTNVRGETALHMAAR 483
Cdd:PHA02874   244 N-ASINDQDIDGSTPLHHAiNPPCDIDIIDILLYHKADISIKDNKGENPIDTAFK 297
PHA02874 PHA02874
ankyrin repeat protein; Provisional
563-823 5.79e-25

ankyrin repeat protein; Provisional


Pssm-ID: 165205 [Multi-domain]  Cd Length: 434  Bit Score: 110.44  E-value: 5.79e-25
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  563 GASLSITTKKGFTPLHVAAKYGKLEVASLLLQKSASPDAAGKSGLTPLHVAAHYDNQKVALLLLDQGASPhaaakngyTP 642
Cdd:PHA02874    25 GNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDIIKLLIDNGVDT--------SI 96
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  643 LHIAAKKNQMdiATSLLEYGADANAVTRQGIASVHLAAQEGHVDMVSLLLSRNANVNLSNKSGLTPLHLAAQEDRVNVAE 722
Cdd:PHA02874    97 LPIPCIEKDM--IKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIK 174
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  723 VLVNQGAHVDAQTKMGYTPLHVGCHYGNIKIVNFLLQHSAKVNAKTKNGYTALHQAAQQGHTHIinVLLQNNASPNELTV 802
Cdd:PHA02874   175 LLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNRSAI--ELLINNASINDQDI 252
                          250       260
                   ....*....|....*....|....
gi 1907073056  803 NGNTALAIArrLGY---ISVVDTL 823
Cdd:PHA02874   253 DGSTPLHHA--INPpcdIDIIDIL 274
PHA02878 PHA02878
ankyrin repeat protein; Provisional
543-816 6.07e-25

ankyrin repeat protein; Provisional


Pssm-ID: 222939 [Multi-domain]  Cd Length: 477  Bit Score: 110.74  E-value: 6.07e-25
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  543 PLHLAAREGHEDVAAFLLDHGASLSITTKKGFTPLHVAA----KYGKLEVASLLLQKSASpdaagkSGLTPLHVAAHYDN 618
Cdd:PHA02878    40 PLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICkepnKLGMKEMIRSINKCSVF------YTLVAIKDAFNNRN 113
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  619 QKVA-LLLLDQgasphaaAKNGYTPLHIAAKKNQMD------IATSLLEYGADANAVTR-QGIASVHLAAQEGHVDMVSL 690
Cdd:PHA02878   114 VEIFkIILTNR-------YKNIQTIDLVYIDKKSKDdiieaeITKLLLSYGADINMKDRhKGNTALHYATENKDQRLTEL 186
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  691 LLSRNANVNLSNKSGLTPLHLAAQEDRVNVAEVLVNQGAHVDAQTKMGYTPLHVGCHY-GNIKIVNFLLQHSAKVNAK-T 768
Cdd:PHA02878   187 LLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYcKDYDILKLLLEHGVDVNAKsY 266
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|
gi 1907073056  769 KNGYTALHQAAQQghTHIINVLLQNNASPNELTVNGNTALAIA--RRLGY 816
Cdd:PHA02878   267 ILGLTALHSSIKS--ERKLKLLLEYGADINSLNSYKLTPLSSAvkQYLCI 314
PHA02875 PHA02875
ankyrin repeat protein; Provisional
419-669 9.27e-25

ankyrin repeat protein; Provisional


Pssm-ID: 165206 [Multi-domain]  Cd Length: 413  Bit Score: 109.31  E-value: 9.27e-25
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  419 NRIRVMELLLKHGASIQAVTESGLTPIHVAAFMGHVNIVSQLMHHGASPNTTNVRGETALHMAARSGQAEVVRYLVQDGA 498
Cdd:PHA02875    13 GELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDVKAVEELLDLGK 92
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  499 QV-EAKAKDDQTPLHISARLGKADIVQQLLQQGASPNAATTSGYTPLHLAAREGHEDVAAFLLDHGASLSITTKKGFTPL 577
Cdd:PHA02875    93 FAdDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPL 172
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  578 HVAAKYGKLEVASLLLQKSASPDAAGKSGltplhvaahydnqKVALLLLdqgasphaaakngytplhiAAKKNQMDIATS 657
Cdd:PHA02875   173 IIAMAKGDIAICKMLLDSGANIDYFGKNG-------------CVAALCY-------------------AIENNKIDIVRL 220
                          250
                   ....*....|..
gi 1907073056  658 LLEYGADANAVT 669
Cdd:PHA02875   221 FIKRGADCNIMF 232
PHA02878 PHA02878
ankyrin repeat protein; Provisional
279-600 2.66e-24

ankyrin repeat protein; Provisional


Pssm-ID: 222939 [Multi-domain]  Cd Length: 477  Bit Score: 108.81  E-value: 2.66e-24
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  279 PLHVASKRGNANMVKLLLDRGAKIDAKTRDGLTPLHCGARSGHEQVVEMLldrsapILSKTKnglsplhmatqgdhlncv 358
Cdd:PHA02878    40 PLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEM------IRSINK------------------ 95
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  359 qlllqhnvpvDDVTNDYlTALHVAAHCGHYKVAKVLL----DKKASPNAKALngftplhiaCKKNRIRVME-----LLLK 429
Cdd:PHA02878    96 ----------CSVFYTL-VAIKDAFNNRNVEIFKIILtnryKNIQTIDLVYI---------DKKSKDDIIEaeitkLLLS 155
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  430 HGASIQAVTE-SGLTPIHVAAFMGHVNIVSQLMHHGASPNTTNVRGETALHMAARSGQAEVVRYLVQDGAQVEAKAKDDQ 508
Cdd:PHA02878   156 YGADINMKDRhKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGN 235
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  509 TPLHIS-ARLGKADIVQQLLQQGASPNAATT-SGYTPLHLAAREghEDVAAFLLDHGASLSITTKKGFTPLHVAAKY--- 583
Cdd:PHA02878   236 TPLHISvGYCKDYDILKLLLEHGVDVNAKSYiLGLTALHSSIKS--ERKLKLLLEYGADINSLNSYKLTPLSSAVKQylc 313
                          330       340
                   ....*....|....*....|
gi 1907073056  584 ---GKLEVASLLLQKSASPD 600
Cdd:PHA02878   314 iniGRILISNICLLKRIKPD 333
PHA02875 PHA02875
ankyrin repeat protein; Provisional
580-802 3.15e-24

ankyrin repeat protein; Provisional


Pssm-ID: 165206 [Multi-domain]  Cd Length: 413  Bit Score: 107.77  E-value: 3.15e-24
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  580 AAKYGKLEVASLLLQKSASPDAAGKSGLTPLHVAAHYDNQKVALLLLDQGASPHAAAKNGYTPLHIAAKKNQMDIATSLL 659
Cdd:PHA02875     9 AILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDVKAVEELL 88
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  660 EYGADANAVT-RQGIASVHLAAQEGHVDMVSLLLSRNANVNLSNKSGLTPLHLAAQEDRVNVAEVLVNQGAHVDAQTKMG 738
Cdd:PHA02875    89 DLGKFADDVFyKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCG 168
                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1907073056  739 YTPLHVGCHYGNIKIVNFLLQHSAKVNAKTKNG-YTALHQAAQQGHTHIINVLLQNNASPNELTV 802
Cdd:PHA02875   169 CTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGcVAALCYAIENNKIDIVRLFIKRGADCNIMFM 233
PHA02874 PHA02874
ankyrin repeat protein; Provisional
423-712 9.08e-24

ankyrin repeat protein; Provisional


Pssm-ID: 165205 [Multi-domain]  Cd Length: 434  Bit Score: 106.59  E-value: 9.08e-24
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  423 VMELLLKHGASIQAVTESGLTPIHVAAFMGHVNIVSQLMHHGASPNTTNVRGETALHMAARSGQAEVVRYLVQDGAqvea 502
Cdd:PHA02874    17 IEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDIIKLLIDNGV---- 92
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  503 kakdDQTPLHISARlgKADIVQQLLQQGASPNAATTSGYTPLHLAAREGHEDVAAFLLDHGASLSITTKKGFTPLHVAAK 582
Cdd:PHA02874    93 ----DTSILPIPCI--EKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIK 166
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  583 YGKLEVASLLLQKSASPDAAGKSGLTPLHVAAHYDNQKVALLLLDQGASPHAAAKNGYTPLHIAAKKNQMdiATSLLEYG 662
Cdd:PHA02874   167 HNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNRS--AIELLINN 244
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|.
gi 1907073056  663 ADANAVTRQGIASVHLAAQ-EGHVDMVSLLLSRNANVNLSNKSGLTPLHLA 712
Cdd:PHA02874   245 ASINDQDIDGSTPLHHAINpPCDIDIIDILLYHKADISIKDNKGENPIDTA 295
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
318-506 1.06e-23

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 223738 [Multi-domain]  Cd Length: 235  Bit Score: 101.82  E-value: 1.06e-23
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  318 RSGHEQVVEMLLDRSAPILSKTKNGLSPLH--MATQGDHLNCVQLLLQHNVPVDD-VTNDYLTALHVAAHCGHYKVAKVL 394
Cdd:COG0666     13 KCFLDLLLVALLLLLSLDLSNPSDKKLNLYleLALLPAASLSELLLKLIVDRHLAaRDLDGRLPLHSAASKGDDKIVKLL 92
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  395 LDKKASPNAKALNGFTPLHIACKKNR-----IRVMELLLKHGASIQAVT---ESGLTPIHVAAFMGHVNIVSQLMHHGAS 466
Cdd:COG0666     93 LASGADVNAKDADGDTPLHLAALNGNppegnIEVAKLLLEAGADLDVNNlrdEDGNTPLHWAALNGDADIVELLLEAGAD 172
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|
gi 1907073056  467 PNTTNVRGETALHMAARSGQAEVVRYLVQDGAQVEAKAKD 506
Cdd:COG0666    173 PNSRNSYGVTALDPAAKNGRIELVKLLLDKGLHLSLLKFN 212
PHA02878 PHA02878
ankyrin repeat protein; Provisional
345-613 3.27e-23

ankyrin repeat protein; Provisional


Pssm-ID: 222939 [Multi-domain]  Cd Length: 477  Bit Score: 105.73  E-value: 3.27e-23
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  345 PLHMATQGDHLNCVQLLLQHNVPVDDVTNDYLTALHVAAHCGHYKVAKVLLDKKAspNAKALNGFTPLHIACKKNRIRVM 424
Cdd:PHA02878    40 PLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSIN--KCSVFYTLVAIKDAFNNRNVEIF 117
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  425 E-LLLKHGASIQAVTESGLTPIHVAAFMgHVNIVSQLMHHGASPN-TTNVRGETALHMAARSGQAEVVRYLVQDGAQVEA 502
Cdd:PHA02878   118 KiILTNRYKNIQTIDLVYIDKKSKDDII-EAEITKLLLSYGADINmKDRHKGNTALHYATENKDQRLTELLLSYGANVNI 196
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  503 KAKDDQTPLHISARLGKADIVQQLLQQGASPNAATTSGYTPLHLA-AREGHEDVAAFLLDHGASLSI-TTKKGFTPLHVA 580
Cdd:PHA02878   197 PDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISvGYCKDYDILKLLLEHGVDVNAkSYILGLTALHSS 276
                          250       260       270
                   ....*....|....*....|....*....|...
gi 1907073056  581 AKygKLEVASLLLQKSASPDAAGKSGLTPLHVA 613
Cdd:PHA02878   277 IK--SERKLKLLLEYGADINSLNSYKLTPLSSA 307
PHA02875 PHA02875
ankyrin repeat protein; Provisional
613-808 1.04e-22

ankyrin repeat protein; Provisional


Pssm-ID: 165206 [Multi-domain]  Cd Length: 413  Bit Score: 103.15  E-value: 1.04e-22
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  613 AAHYDNQKVALLLLDQGASPHAAAKNGYTPLHIAAKKNQMDIATSLLEYGADANaVTRQGIAS-VHLAAQEGHVDMVSLL 691
Cdd:PHA02875     9 AILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPD-VKYPDIESeLHDAVEEGDVKAVEEL 87
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  692 LSRNANVN-LSNKSGLTPLHLAAQEDRVNVAEVLVNQGAHVDAQTKMGYTPLHVGCHYGNIKIVNFLLQHSAKVNAKTKN 770
Cdd:PHA02875    88 LDLGKFADdVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCC 167
                          170       180       190
                   ....*....|....*....|....*....|....*...
gi 1907073056  771 GYTALHQAAQQGHTHIINVLLQNNASPNELTVNGNTAL 808
Cdd:PHA02875   168 GCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAA 205
PHA02875 PHA02875
ankyrin repeat protein; Provisional
151-381 2.43e-22

ankyrin repeat protein; Provisional


Pssm-ID: 165206 [Multi-domain]  Cd Length: 413  Bit Score: 101.99  E-value: 2.43e-22
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  151 NHLEVVRFLLDNGASQSLATEDGFTPLAVALQQGHDQVVSLLLENDTKGKVRLPA----LHIAARKDDTKAAALLLQNDT 226
Cdd:PHA02875    13 GELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDieseLHDAVEEGDVKAVEELLDLGK 92
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  227 NADveskmvvNRATESGFTPLHIAAHYGNINVATLLLNRAAAVDFTARNDITPLHVASKRGNANMVKLLLDRGAKIDAKT 306
Cdd:PHA02875    93 FAD-------DVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIED 165
                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907073056  307 RDGLTPLHCGARSGHEQVVEMLLDRSAPILSKTKNG-LSPLHMATQGDHLNCVQLLLQHNVPVDDVT---NDYLTALHV 381
Cdd:PHA02875   166 CCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGcVAALCYAIENNKIDIVRLFIKRGADCNIMFmieGEECTILDM 244
Ank_2 pfam12796
Ankyrin repeats (3 copies);
78-164 3.40e-22

Ankyrin repeats (3 copies);


Pssm-ID: 432791 [Multi-domain]  Cd Length: 91  Bit Score: 92.49  E-value: 3.40e-22
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056   78 LHLASKEGHVEVVSELLQREANVDAATKKGNTALHIASLAGQAEVVKVLVTNgANVNAQSqNGFTPLYMAAQENHLEVVR 157
Cdd:pfam12796    1 LMLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLEH-ADVNLKD-NGRTALHYAARSGHLEIVK 78

                   ....*..
gi 1907073056  158 FLLDNGA 164
Cdd:pfam12796   79 LLLEKGA 85
PHA02874 PHA02874
ankyrin repeat protein; Provisional
85-455 4.12e-22

ankyrin repeat protein; Provisional


Pssm-ID: 165205 [Multi-domain]  Cd Length: 434  Bit Score: 101.58  E-value: 4.12e-22
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056   85 GHVEVVSELLQREAN-VDAATKKGNTALHIASLAGQAEVVKVLVTNGANVNAQSQNGFTPLYMAAQENHLEVVRFLLDNG 163
Cdd:PHA02874    12 GDIEAIEKIIKNKGNcINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDIIKLLIDNG 91
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  164 ASQSLatedgfTPLAValqqghdqvvsllLENDTkgkvrlpalhiaarkddtkaaalllqndTNADVESKMVVNRATESG 243
Cdd:PHA02874    92 VDTSI------LPIPC-------------IEKDM----------------------------IKTILDCGIDVNIKDAEL 124
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  244 FTPLHIAAHYGNINVATLLLNRAAAVDFTARNDITPLHVASKRGNANMVKLLLDRGAKIDAKTRDGLTPLHCGARSGHEQ 323
Cdd:PHA02874   125 KTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYA 204
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  324 VVEMLLDRSAPILSKTKNGLSPLHMAtqgdhlncvqllLQHNvpvddvtndyltalhvaahcghyKVAKVLLDKKASPNA 403
Cdd:PHA02874   205 CIKLLIDHGNHIMNKCKNGFTPLHNA------------IIHN-----------------------RSAIELLINNASIND 249
                          330       340       350       360       370
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1907073056  404 KALNGFTPLHIA----CKKNrirVMELLLKHGASIQAVTESGLTPIHVAafMGHVN 455
Cdd:PHA02874   250 QDIDGSTPLHHAinppCDID---IIDILLYHKADISIKDNKGENPIDTA--FKYIN 300
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
374-572 5.64e-22

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 223738 [Multi-domain]  Cd Length: 235  Bit Score: 96.82  E-value: 5.64e-22
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  374 DYLTALHVAAHCGHYKVAKVLL----DKKASPNAKALNGFTPLHIACKknRIRVMELLLKHG-ASIQAVTESGLTPIHVA 448
Cdd:COG0666      3 PSLSALLLINKCFLDLLLVALLlllsLDLSNPSDKKLNLYLELALLPA--ASLSELLLKLIVdRHLAARDLDGRLPLHSA 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  449 AFMGHVNIVSQLMHHGASPNTTNVRGETALHMAARSGQ-----AEVVRYLVQDGAQVEAKA---KDDQTPLHISARLGKA 520
Cdd:COG0666     81 ASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNppegnIEVAKLLLEAGADLDVNNlrdEDGNTPLHWAALNGDA 160
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|..
gi 1907073056  521 DIVQQLLQQGASPNAATTSGYTPLHLAAREGHEDVAAFLLDHGASLSITTKK 572
Cdd:COG0666    161 DIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKGLHLSLLKFN 212
Ank_2 pfam12796
Ankyrin repeats (3 copies);
478-569 1.86e-21

Ankyrin repeats (3 copies);


Pssm-ID: 432791 [Multi-domain]  Cd Length: 91  Bit Score: 90.57  E-value: 1.86e-21
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  478 LHMAARSGQAEVVRYLVQDGAQVEAKAKDDQTPLHISARLGKADIVQQLLQQGASpnAATTSGYTPLHLAAREGHEDVAA 557
Cdd:pfam12796    1 LMLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLEHADV--NLKDNGRTALHYAARSGHLEIVK 78
                           90
                   ....*....|..
gi 1907073056  558 FLLDHGASLSIT 569
Cdd:pfam12796   79 LLLEKGADINVK 90
Ank_2 pfam12796
Ankyrin repeats (3 copies);
511-601 3.18e-21

Ankyrin repeats (3 copies);


Pssm-ID: 432791 [Multi-domain]  Cd Length: 91  Bit Score: 89.80  E-value: 3.18e-21
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  511 LHISARLGKADIVQQLLQQGASPNAATTSGYTPLHLAAREGHEDVAAFLLDHGASLSITtkKGFTPLHVAAKYGKLEVAS 590
Cdd:pfam12796    1 LMLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLEHADVNLKD--NGRTALHYAARSGHLEIVK 78
                           90
                   ....*....|.
gi 1907073056  591 LLLQKSASPDA 601
Cdd:pfam12796   79 LLLEKGADINV 89
PHA02878 PHA02878
ankyrin repeat protein; Provisional
409-668 3.56e-21

ankyrin repeat protein; Provisional


Pssm-ID: 222939 [Multi-domain]  Cd Length: 477  Bit Score: 99.18  E-value: 3.56e-21
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  409 FTPLHIACKKNRIRVMELLLKHGASIQAVTESGLTPIHVAAFMGHVNIVSQLMhhgASPNTTNV-RGETALHMAARSGQA 487
Cdd:PHA02878    38 FIPLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMI---RSINKCSVfYTLVAIKDAFNNRNV 114
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  488 EVVRYLV---------QDGAQVEAKAKDDQTplhisarlgKADIVQQLLQQGASPNAATT-SGYTPLHLAAREGHEDVAA 557
Cdd:PHA02878   115 EIFKIILtnrykniqtIDLVYIDKKSKDDII---------EAEITKLLLSYGADINMKDRhKGNTALHYATENKDQRLTE 185
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  558 FLLDHGASLSITTKKGFTPLHVAAKYGKLEVASLLLQKSASPDAAGKSGLTPLHVAAHY-DNQKVALLLLDQGASPHAAA 636
Cdd:PHA02878   186 LLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYcKDYDILKLLLEHGVDVNAKS 265
                          250       260       270
                   ....*....|....*....|....*....|...
gi 1907073056  637 K-NGYTPLHIAAKKNQmdIATSLLEYGADANAV 668
Cdd:PHA02878   266 YiLGLTALHSSIKSER--KLKLLLEYGADINSL 296
Ank_2 pfam12796
Ankyrin repeats (3 copies);
379-471 7.28e-21

Ankyrin repeats (3 copies);


Pssm-ID: 432791 [Multi-domain]  Cd Length: 91  Bit Score: 88.64  E-value: 7.28e-21
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  379 LHVAAHCGHYKVAKVLLDKKASPNAKALNGFTPLHIACKKNRIRVMELLLKHGAsiQAVTESGLTPIHVAAFMGHVNIVS 458
Cdd:pfam12796    1 LMLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLEHAD--VNLKDNGRTALHYAARSGHLEIVK 78
                           90
                   ....*....|...
gi 1907073056  459 QLMHHGASPNTTN 471
Cdd:pfam12796   79 LLLEKGADINVKD 91
Death cd01670
Death Domain: a protein-protein interaction domain; Death Domains (DDs) are protein-protein ...
1502-1576 8.45e-21

Death Domain: a protein-protein interaction domain; Death Domains (DDs) are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. Structural analysis of DD-DD complexes show that the domains interact with each other in many different ways. DD-containing proteins serve as adaptors in signaling pathways and they can recruit other proteins into signaling complexes. In mammals, they are prominent components of the programmed cell death (apoptosis) pathway and are found in a number of other signaling pathways. In invertebrates, they are involved in transcriptional regulation of zygotic patterning genes in insect embryogenesis, and are components of the ToII/NF-kappaB pathway, a conserved innate immune pathway in animal cells.


Pssm-ID: 260017 [Multi-domain]  Cd Length: 79  Bit Score: 88.11  E-value: 8.45e-21
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1907073056 1502 VADHLGLSWTELARELNFSVDEINQIRVENPNSLISQSFMLLKKWVTRDGKNATTDALTSVLTKINRIDIVTLLE 1576
Cdd:cd01670      5 VAEELGRDWKKLARKLGLSEGDIDQIEEDNRDDLKEQAYQMLERWREREGDEATLGRLIQALREIGRRDLAEKLE 79
Ank_2 pfam12796
Ankyrin repeats (3 copies);
111-196 8.92e-21

Ankyrin repeats (3 copies);


Pssm-ID: 432791 [Multi-domain]  Cd Length: 91  Bit Score: 88.64  E-value: 8.92e-21
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  111 LHIASLAGQAEVVKVLVTNGANVNAQSQNGFTPLYMAAQENHLEVVRFLLDNGASQslATEDGFTPLAVALQQGHDQVVS 190
Cdd:pfam12796    1 LMLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLEHADVN--LKDNGRTALHYAARSGHLEIVK 78

                   ....*.
gi 1907073056  191 LLLEND 196
Cdd:pfam12796   79 LLLEKG 84
Ank_2 pfam12796
Ankyrin repeats (3 copies);
677-767 1.04e-20

Ankyrin repeats (3 copies);


Pssm-ID: 432791 [Multi-domain]  Cd Length: 91  Bit Score: 88.26  E-value: 1.04e-20
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  677 HLAAQEGHVDMVSLLLSRNANVNLSNKSGLTPLHLAAQEDRVNVAEVLVNQgAHVDAQTKmGYTPLHVGCHYGNIKIVNF 756
Cdd:pfam12796    2 MLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLEH-ADVNLKDN-GRTALHYAARSGHLEIVKL 79
                           90
                   ....*....|.
gi 1907073056  757 LLQHSAKVNAK 767
Cdd:pfam12796   80 LLEKGADINVK 90
PHA02878 PHA02878
ankyrin repeat protein; Provisional
111-429 1.41e-20

ankyrin repeat protein; Provisional


Pssm-ID: 222939 [Multi-domain]  Cd Length: 477  Bit Score: 97.26  E-value: 1.41e-20
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  111 LHIASLAGQAEVVKVLVTNGANVNAQSQNGFTPLYMAAQENHLEVVRFLLDNGASQSLATEdgFTPLAVALQQGHDQVVS 190
Cdd:PHA02878    41 LHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSVFYT--LVAIKDAFNNRNVEIFK 118
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  191 LLLENDTKGKVRLPALHIAARKDD----TKAAALLLQNdtNADVESKmvvnrATESGFTPLHIAAHYGNINVATLLLNRA 266
Cdd:PHA02878   119 IILTNRYKNIQTIDLVYIDKKSKDdiieAEITKLLLSY--GADINMK-----DRHKGNTALHYATENKDQRLTELLLSYG 191
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  267 AAVDFTARNDITPLHVASKRGNANMVKLLLDRGAKIDAKTRDGLTPLHCG-ARSGHEQVVEMLLDRSAPILSK-TKNGLS 344
Cdd:PHA02878   192 ANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISvGYCKDYDILKLLLEHGVDVNAKsYILGLT 271
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  345 PLHMATQGDHLncVQLLLQHNVPVDDVTNDYLTALHVAA------HCGHYKVAKVLLDKKASPNAKALNGFTpLHIACKK 418
Cdd:PHA02878   272 ALHSSIKSERK--LKLLLEYGADINSLNSYKLTPLSSAVkqylciNIGRILISNICLLKRIKPDIKNSEGFI-DNMDCIT 348
                          330
                   ....*....|.
gi 1907073056  419 NRIRVMELLLK 429
Cdd:PHA02878   349 SNKRLNQIKDK 359
Ank_2 pfam12796
Ankyrin repeats (3 copies);
346-436 2.79e-20

Ankyrin repeats (3 copies);


Pssm-ID: 432791 [Multi-domain]  Cd Length: 91  Bit Score: 87.10  E-value: 2.79e-20
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  346 LHMATQGDHLNCVQLLLQHNVPVDDVTNDYLTALHVAAHCGHYKVAKVLLDkKASPNAKaLNGFTPLHIACKKNRIRVME 425
Cdd:pfam12796    1 LMLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLE-HADVNLK-DNGRTALHYAARSGHLEIVK 78
                           90
                   ....*....|.
gi 1907073056  426 LLLKHGASIQA 436
Cdd:pfam12796   79 LLLEKGADINV 89
Ank_2 pfam12796
Ankyrin repeats (3 copies);
47-136 3.10e-20

Ankyrin repeats (3 copies);


Pssm-ID: 432791 [Multi-domain]  Cd Length: 91  Bit Score: 87.10  E-value: 3.10e-20
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056   47 RAARAGHLEKALDYIKNGVDVNICNQNGLNALHLASKEGHVEVVSELLQrEANVDAATkKGNTALHIASLAGQAEVVKVL 126
Cdd:pfam12796    3 LAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLE-HADVNLKD-NGRTALHYAARSGHLEIVKLL 80
                           90
                   ....*....|
gi 1907073056  127 VTNGANVNAQ 136
Cdd:pfam12796   81 LEKGADINVK 90
Ank_2 pfam12796
Ankyrin repeats (3 copies);
412-503 3.10e-20

Ankyrin repeats (3 copies);


Pssm-ID: 432791 [Multi-domain]  Cd Length: 91  Bit Score: 87.10  E-value: 3.10e-20
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  412 LHIACKKNRIRVMELLLKHGASIQAVTESGLTPIHVAAFMGHVNIVSQLMHHGASPNTTNvrGETALHMAARSGQAEVVR 491
Cdd:pfam12796    1 LMLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLEHADVNLKDN--GRTALHYAARSGHLEIVK 78
                           90
                   ....*....|..
gi 1907073056  492 YLVQDGAQVEAK 503
Cdd:pfam12796   79 LLLEKGADINVK 90
Ank_2 pfam12796
Ankyrin repeats (3 copies);
445-535 3.80e-20

Ankyrin repeats (3 copies);


Pssm-ID: 432791 [Multi-domain]  Cd Length: 91  Bit Score: 86.71  E-value: 3.80e-20
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  445 IHVAAFMGHVNIVSQLMHHGASPNTTNVRGETALHMAARSGQAEVVRYLVqDGAQVEAKAkDDQTPLHISARLGKADIVQ 524
Cdd:pfam12796    1 LMLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLL-EHADVNLKD-NGRTALHYAARSGHLEIVK 78
                           90
                   ....*....|.
gi 1907073056  525 QLLQQGASPNA 535
Cdd:pfam12796   79 LLLEKGADINV 89
Ank_2 pfam12796
Ankyrin repeats (3 copies);
313-404 4.11e-20

Ankyrin repeats (3 copies);


Pssm-ID: 432791 [Multi-domain]  Cd Length: 91  Bit Score: 86.71  E-value: 4.11e-20
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  313 LHCGARSGHEQVVEMLLDRSAPILSKTKNGLSPLHMATQGDHLNCVQLLLQHNVPvdDVTNDYLTALHVAAHCGHYKVAK 392
Cdd:pfam12796    1 LMLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLEHADV--NLKDNGRTALHYAARSGHLEIVK 78
                           90
                   ....*....|..
gi 1907073056  393 VLLDKKASPNAK 404
Cdd:pfam12796   79 LLLEKGADINVK 90
Death pfam00531
Death domain;
1498-1576 6.06e-20

Death domain;


Pssm-ID: 425735  Cd Length: 83  Bit Score: 85.83  E-value: 6.06e-20
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907073056 1498 RMAIVADHLGLSWTELARELNFSVDEINQIRVENPNsLISQSFMLLKKWVTRDGKNATTDALTSVLTKINRIDIVTLLE 1576
Cdd:pfam00531    3 QLDRLLDPLGKDWRELARKLGLSENEIDEIESENPD-LRSQTYELLRLWEQREGKNATVGTLLEALRKLGRRDAAEKIQ 80
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
473-596 6.62e-20

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 223738 [Multi-domain]  Cd Length: 235  Bit Score: 91.04  E-value: 6.62e-20
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  473 RGETALHMAARSGQAEVVRYLVQDGAQVEAKAKDDQTPLHISAR-----LGKADIVQQLLQQGAS---PNAATTSGYTPL 544
Cdd:COG0666     72 DGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALngnppEGNIEVAKLLLEAGADldvNNLRDEDGNTPL 151
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|..
gi 1907073056  545 HLAAREGHEDVAAFLLDHGASLSITTKKGFTPLHVAAKYGKLEVASLLLQKS 596
Cdd:COG0666    152 HWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG 203
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
501-627 6.68e-20

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 223738 [Multi-domain]  Cd Length: 235  Bit Score: 91.04  E-value: 6.68e-20
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  501 EAKAKDDQTPLHISARLGKADIVQQLLQQGASPNAATTSGYTPLHLAAREGHE-----DVAAFLLDHGASLSITT---KK 572
Cdd:COG0666     67 AARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPpegniEVAKLLLEAGADLDVNNlrdED 146
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 1907073056  573 GFTPLHVAAKYGKLEVASLLLQKSASPDAAGKSGLTPLHVAAHYDNQKVALLLLD 627
Cdd:COG0666    147 GNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLD 201
PHA02874 PHA02874
ankyrin repeat protein; Provisional
61-285 1.05e-19

ankyrin repeat protein; Provisional


Pssm-ID: 165205 [Multi-domain]  Cd Length: 434  Bit Score: 94.26  E-value: 1.05e-19
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056   61 IKNGVDVNICNQNGLNALHLASKEGHVEVVSELLQREANVDAATKKGNTALHIASLAGQAEVVKVLVTNGANVNAQSQNG 140
Cdd:PHA02874   111 LDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNG 190
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  141 FTPLYMAAQENHLEVVRFLLDNGASQSLATEDGFTPLAVALQQGHdQVVSLLLENDTKgkvrlpalhiaarkddtkaaal 220
Cdd:PHA02874   191 ESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNR-SAIELLINNASI---------------------- 247
                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907073056  221 llqNDTNADveskmvvnratesGFTPLHIAAHYG-NINVATLLLNRAAAVDFTARNDITPLHVASK 285
Cdd:PHA02874   248 ---NDQDID-------------GSTPLHHAINPPcDIDIIDILLYHKADISIKDNKGENPIDTAFK 297
Ank_2 pfam12796
Ankyrin repeats (3 copies);
643-734 1.27e-19

Ankyrin repeats (3 copies);


Pssm-ID: 432791 [Multi-domain]  Cd Length: 91  Bit Score: 85.17  E-value: 1.27e-19
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  643 LHIAAKKNQMDIATSLLEYGADANAVTRQGIASVHLAAQEGHVDMVSLLLSrNANVNLSNKsGLTPLHLAAQEDRVNVAE 722
Cdd:pfam12796    1 LMLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLE-HADVNLKDN-GRTALHYAARSGHLEIVK 78
                           90
                   ....*....|..
gi 1907073056  723 VLVNQGAHVDAQ 734
Cdd:pfam12796   79 LLLEKGADINVK 90
Ank_2 pfam12796
Ankyrin repeats (3 copies);
577-667 2.64e-19

Ankyrin repeats (3 copies);


Pssm-ID: 432791 [Multi-domain]  Cd Length: 91  Bit Score: 84.40  E-value: 2.64e-19
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  577 LHVAAKYGKLEVASLLLQKSASPDAAGKSGLTPLHVAAHYDNQKVALLLLDQGASphAAAKNGYTPLHIAAKKNQMDIAT 656
Cdd:pfam12796    1 LMLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLEHADV--NLKDNGRTALHYAARSGHLEIVK 78
                           90
                   ....*....|.
gi 1907073056  657 SLLEYGADANA 667
Cdd:pfam12796   79 LLLEKGADINV 89
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
552-770 3.96e-19

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 223738 [Multi-domain]  Cd Length: 235  Bit Score: 88.73  E-value: 3.96e-19
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  552 HEDVAAFLLDHGASLSITTKKGFTPLHVAAKYGKLEVASLLLQK-SASPDAAGKSGLTPLHVAAHYDNQKVALLLLDQGA 630
Cdd:COG0666     18 LLLVALLLLLSLDLSNPSDKKLNLYLELALLPAASLSELLLKLIvDRHLAARDLDGRLPLHSAASKGDDKIVKLLLASGA 97
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  631 SPHAAAKNGYTPLHIAAKKNQMDIatslleygadanavtrqgiasvhlaaqeGHVDMVSLLLSRNA---NVNLSNKSGLT 707
Cdd:COG0666     98 DVNAKDADGDTPLHLAALNGNPPE----------------------------GNIEVAKLLLEAGAdldVNNLRDEDGNT 149
                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907073056  708 PLHLAAQEDRVNVAEVLVNQGAHVDAQTKMGYTPLHVGCHYGNIKIVNFLLQHSAKVNAKTKN 770
Cdd:COG0666    150 PLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKGLHLSLLKFN 212
Ank_2 pfam12796
Ankyrin repeats (3 copies);
280-366 4.77e-19

Ankyrin repeats (3 copies);


Pssm-ID: 432791 [Multi-domain]  Cd Length: 91  Bit Score: 83.63  E-value: 4.77e-19
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  280 LHVASKRGNANMVKLLLDRGAKIDAKTRDGLTPLHCGARSGHEQVVEMLLDRsaPILSKTKNGLSPLHMATQGDHLNCVQ 359
Cdd:pfam12796    1 LMLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLEH--ADVNLKDNGRTALHYAARSGHLEIVK 78

                   ....*..
gi 1907073056  360 LLLQHNV 366
Cdd:pfam12796   79 LLLEKGA 85
Ank_2 pfam12796
Ankyrin repeats (3 copies);
247-338 6.98e-19

Ankyrin repeats (3 copies);


Pssm-ID: 432791 [Multi-domain]  Cd Length: 91  Bit Score: 83.25  E-value: 6.98e-19
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  247 LHIAAHYGNINVATLLLNRAAAVDFTARNDITPLHVASKRGNANMVKLLLDRgAKIDAKTrDGLTPLHCGARSGHEQVVE 326
Cdd:pfam12796    1 LMLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLEH-ADVNLKD-NGRTALHYAARSGHLEIVK 78
                           90
                   ....*....|..
gi 1907073056  327 MLLDRSAPILSK 338
Cdd:pfam12796   79 LLLEKGADINVK 90
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
483-712 7.71e-19

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 223738 [Multi-domain]  Cd Length: 235  Bit Score: 87.57  E-value: 7.71e-19
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  483 RSGQAEVVRYLVQDGAQVEAKAKDDQTPLHISARLGKADIvQQLLQQGASPNAATTSGYTPLHLAAREGHEDVAAFLLDH 562
Cdd:COG0666     17 DLLLVALLLLLSLDLSNPSDKKLNLYLELALLPAASLSEL-LLKLIVDRHLAARDLDGRLPLHSAASKGDDKIVKLLLAS 95
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  563 GASLSITTKKGFTPLHVAAKYGKL-----EVASLLLQKSASPD---AAGKSGLTPLHVAAHYDNQKVALLLLDQGASPHA 634
Cdd:COG0666     96 GADVNAKDADGDTPLHLAALNGNPpegniEVAKLLLEAGADLDvnnLRDEDGNTPLHWAALNGDADIVELLLEAGADPNS 175
                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907073056  635 AAKNGYTPLHIAAKKNQMDIATSLLEYGadanavtrqGIASVHLAAQEGHVdmvslllsrNANVNLSNKSGLTPLHLA 712
Cdd:COG0666    176 RNSYGVTALDPAAKNGRIELVKLLLDKG---------LHLSLLKFNLEGVA---------NANVSKRNILNLTSLIIA 235
Ank_2 pfam12796
Ankyrin repeats (3 copies);
709-798 1.34e-18

Ankyrin repeats (3 copies);


Pssm-ID: 432791 [Multi-domain]  Cd Length: 91  Bit Score: 82.48  E-value: 1.34e-18
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  709 LHLAAQEDRVNVAEVLVNQGAHVDAQTKMGYTPLHVGCHYGNIKIVNFLLQHsAKVNAKTkNGYTALHQAAQQGHTHIIN 788
Cdd:pfam12796    1 LMLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLEH-ADVNLKD-NGRTALHYAARSGHLEIVK 78
                           90
                   ....*....|
gi 1907073056  789 VLLQNNASPN 798
Cdd:pfam12796   79 LLLEKGADIN 88
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
171-365 8.77e-18

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 223738 [Multi-domain]  Cd Length: 235  Bit Score: 84.49  E-value: 8.77e-18
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  171 EDGFTPLAVALQQGHDQVVSLLLENDTKGKVRLPALHIAARkDDTKAAALLLQNDTNADVESKMVVNRATESGFTPLHIA 250
Cdd:COG0666      2 KPSLSALLLINKCFLDLLLVALLLLLSLDLSNPSDKKLNLY-LELALLPAASLSELLLKLIVDRHLAARDLDGRLPLHSA 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  251 AHYGNINVATLLLNRAAAVDFTARNDITPLHVASKRGNAN-----MVKLLLDRGAKIDAKTR---DGLTPLHCGARSGHE 322
Cdd:COG0666     81 ASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPegnieVAKLLLEAGADLDVNNLrdeDGNTPLHWAALNGDA 160
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|...
gi 1907073056  323 QVVEMLLDRSAPILSKTKNGLSPLHMATQGDHLNCVQLLLQHN 365
Cdd:COG0666    161 DIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG 203
PHA02874 PHA02874
ankyrin repeat protein; Provisional
48-313 1.02e-17

ankyrin repeat protein; Provisional


Pssm-ID: 165205 [Multi-domain]  Cd Length: 434  Bit Score: 88.10  E-value: 1.02e-17
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056   48 AARAGHLEKALDYIKNGVDVNICNQNGLNALHLASKEGHVEVVSELLqrEANVDAATkkgntaLHIASLagQAEVVKVLV 127
Cdd:PHA02874    42 AIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDIIKLLI--DNGVDTSI------LPIPCI--EKDMIKTIL 111
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  128 TNGANVNAQSQNGFTPLYMAAQENHLEVVRFLLDNGASQSLATEDGFTPLAVALQQGHDQVVSLLLENDTKGKVR----L 203
Cdd:PHA02874   112 DCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKdnngE 191
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  204 PALHIAARKDDTKAAALLLQNDTNADVESKmvvnrateSGFTPLHIAAHYgNINVATLLLNRaAAVDFTARNDITPLHVA 283
Cdd:PHA02874   192 SPLHNAAEYGDYACIKLLIDHGNHIMNKCK--------NGFTPLHNAIIH-NRSAIELLINN-ASINDQDIDGSTPLHHA 261
                          250       260       270
                   ....*....|....*....|....*....|.
gi 1907073056  284 -SKRGNANMVKLLLDRGAKIDAKTRDGLTPL 313
Cdd:PHA02874   262 iNPPCDIDIIDILLYHKADISIKDNKGENPI 292
Ank_2 pfam12796
Ankyrin repeats (3 copies);
610-702 2.79e-17

Ankyrin repeats (3 copies);


Pssm-ID: 432791 [Multi-domain]  Cd Length: 91  Bit Score: 78.63  E-value: 2.79e-17
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  610 LHVAAHYDNQKVALLLLDQGASPHAAAKNGYTPLHIAAKKNQMDIATSLLEYgADANAVTRQGIAsVHLAAQEGHVDMVS 689
Cdd:pfam12796    1 LMLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLEH-ADVNLKDNGRTA-LHYAARSGHLEIVK 78
                           90
                   ....*....|...
gi 1907073056  690 LLLSRNANVNLSN 702
Cdd:pfam12796   79 LLLEKGADINVKD 91
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
46-172 4.93e-17

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 223738 [Multi-domain]  Cd Length: 235  Bit Score: 82.56  E-value: 4.93e-17
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056   46 LRAARAGHLEKALDYIKNGVDVNICNQNGLNALHLASKEGH-----VEVVSELLQREANVDAAT---KKGNTALHIASLA 117
Cdd:COG0666     78 HSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNppegnIEVAKLLLEAGADLDVNNlrdEDGNTPLHWAALN 157
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 1907073056  118 GQAEVVKVLVTNGANVNAQSQNGFTPLYMAAQENHLEVVRFLLDNGASQSLATED 172
Cdd:COG0666    158 GDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKGLHLSLLKFN 212
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
636-824 6.02e-17

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 223738 [Multi-domain]  Cd Length: 235  Bit Score: 82.18  E-value: 6.02e-17
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  636 AKNGYTPLHIAAKKNQMDIATSLLEYGADANAVTRQGIASVHLAAQEGHVDMVSLLLSRNANVNLSN---KSGLTPLHLA 712
Cdd:COG0666      1 SKPSLSALLLINKCFLDLLLVALLLLLSLDLSNPSDKKLNLYLELALLPAASLSELLLKLIVDRHLAardLDGRLPLHSA 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  713 AQEDRVNVAEVLVNQGAHVDAQTKMGYTPLHVGCHYGN-----IKIVNFLLQHSAK---VNAKTKNGYTALHQAAQQGHT 784
Cdd:COG0666     81 ASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNppegnIEVAKLLLEAGADldvNNLRDEDGNTPLHWAALNGDA 160
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|
gi 1907073056  785 HIINVLLQNNASPNELTVNGNTALAIARRLGYISVVDTLK 824
Cdd:COG0666    161 DIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLL 200
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
607-792 8.55e-17

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 223738 [Multi-domain]  Cd Length: 235  Bit Score: 81.79  E-value: 8.55e-17
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  607 LTPLHVAAHYDNQKVALLLLDQ-----GASPHAAAKNGYTPLHIAAKKNQMDIaTSLLEYGADANAVTRQGIASVHLAAQ 681
Cdd:COG0666      4 SLSALLLINKCFLDLLLVALLLllsldLSNPSDKKLNLYLELALLPAASLSEL-LLKLIVDRHLAARDLDGRLPLHSAAS 82
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  682 EGHVDMVSLLLSRNANVNLSNKSGLTPLHLAA-----QEDRVNVAEVLVNQGAHVD---AQTKMGYTPLHVGCHYGNIKI 753
Cdd:COG0666     83 KGDDKIVKLLLASGADVNAKDADGDTPLHLAAlngnpPEGNIEVAKLLLEAGADLDvnnLRDEDGNTPLHWAALNGDADI 162
                          170       180       190
                   ....*....|....*....|....*....|....*....
gi 1907073056  754 VNFLLQHSAKVNAKTKNGYTALHQAAQQGHTHIINVLLQ 792
Cdd:COG0666    163 VELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLD 201
PHA02875 PHA02875
ankyrin repeat protein; Provisional
52-300 9.62e-17

ankyrin repeat protein; Provisional


Pssm-ID: 165206 [Multi-domain]  Cd Length: 413  Bit Score: 85.04  E-value: 9.62e-17
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056   52 GHLEKALDYIKNGVDVNICNQNGLNALHLASKEGHVEVVSELLQREANVDAATKKGNTALHIASLAGQAEVVKVLVTNGA 131
Cdd:PHA02875    13 GELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDVKAVEELLDLGK 92
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  132 NVN-AQSQNGFTPLYMAAQENHLEVVRFLLDNGASQSLATEDGFTPlavalqqghdqvvslllendtkgkvrlpaLHIAA 210
Cdd:PHA02875    93 FADdVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSP-----------------------------LHLAV 143
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  211 RKDDTKAAALLLQNDTNADVESKMvvnratesGFTPLHIAAHYGNINVATLLLNRAAAVDFTARN-DITPLHVASKRGNA 289
Cdd:PHA02875   144 MMGDIKGIELLIDHKACLDIEDCC--------GCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNgCVAALCYAIENNKI 215
                          250
                   ....*....|.
gi 1907073056  290 NMVKLLLDRGA 300
Cdd:PHA02875   216 DIVRLFIKRGA 226
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
48-194 9.67e-17

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 223738 [Multi-domain]  Cd Length: 235  Bit Score: 81.79  E-value: 9.67e-17
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056   48 AARAGHLEKALDYIKNGVDVNICNQNGLNALHLASKEGHVEVVSELLQREANVDAATKKGNTALHIASLAGQ-----AEV 122
Cdd:COG0666     47 LLPAASLSELLLKLIVDRHLAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNppegnIEV 126
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1907073056  123 VKVLVTNGA---NVNAQSQNGFTPLYMAAQENHLEVVRFLLDNGASQSLATEDGFTPLAVALQQGHDQVVSLLLE 194
Cdd:COG0666    127 AKLLLEAGAdldVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLD 201
PHA02878 PHA02878
ankyrin repeat protein; Provisional
53-364 1.36e-16

ankyrin repeat protein; Provisional


Pssm-ID: 222939 [Multi-domain]  Cd Length: 477  Bit Score: 84.93  E-value: 1.36e-16
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056   53 HLEKALDYIKNGVDVNicnqNGLNA-----LHLASKEGHVEVVSELLQREANVDAATKKGNTALHIASLAGQAEVVKVLV 127
Cdd:PHA02878    15 TILKYIEYIDHTENYS----TSASLipfipLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMI 90
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  128 tngANVNAQS-QNGFTPLYMAAQENHLEVVRFLLDNGASQSLATEDGFTPLAVALQQGHDQVVSLLLEN--DTKGKVRLP 204
Cdd:PHA02878    91 ---RSINKCSvFYTLVAIKDAFNNRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYgaDINMKDRHK 167
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  205 ---ALHIAARKDDTKAAALLLQNDTNADveskmVVNRATESgftPLHIAAHYGNINVATLLLNRAAAVDFTARNDITPLH 281
Cdd:PHA02878   168 gntALHYATENKDQRLTELLLSYGANVN-----IPDKTNNS---PLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLH 239
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  282 VASKR-GNANMVKLLLDRGAKIDAK-TRDGLTPLHCGARSghEQVVEMLLDRSAPILSKTKNGLSPLHMAT-QGDHLNCV 358
Cdd:PHA02878   240 ISVGYcKDYDILKLLLEHGVDVNAKsYILGLTALHSSIKS--ERKLKLLLEYGADINSLNSYKLTPLSSAVkQYLCINIG 317

                   ....*.
gi 1907073056  359 QLLLQH 364
Cdd:PHA02878   318 RILISN 323
TRPV5-6 cd22192
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 5 and 6; TRPV5 and ...
575-759 6.82e-16

Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 5 and 6; TRPV5 and TRPV6 (TRPV5/6) are two homologous members within the vanilloid subfamily of the transient receptor potential (TRP) family. TRPV5 and TRPV6 show only 30-40% homology with other members of the TRP family and have unique properties that differentiates them from other TRP channels. They mediate calcium uptake in epithelia and their expression is dramatically increased in numerous types of cancer. The structure of TRPV5/6 shows the typical topology features of all TRP family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6, which is predicted to form the Ca2+ pore, and large intracellular N- and C-terminal domains. The N-terminal domain of TRPV5/6 contains three ankyrin repeats. This structural element is present in several proteins and plays a role in protein-protein interactions. The N- and C-terminal tails of TRPV5/6 each contain an internal PDZ motif which can function as part of a molecular scaffold via interaction with PDZ-domain containing proteins. A major difference between the properties of TRPV5 and TRPV6 is in their tissue distribution: TRPV5 is predominantly expressed in the distal convoluted tubules (DCT) and connecting tubules (CNT) of the kidney, with limited expression in extrarenal tissues. In contrast, TRPV6 has a broader expression pattern such as expression in the intestine, kidney, placenta, epididymis, exocrine tissues, and a few other tissues.


Pssm-ID: 411976 [Multi-domain]  Cd Length: 609  Bit Score: 83.52  E-value: 6.82e-16
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  575 TPLHVAAKYGKLE-VASLLLQKSASPDAAGKSGLTPLHVAAHYDNQKVALLLLDqgASPH-------AAAKNGYTPLHIA 646
Cdd:cd22192     19 SPLLLAAKENDVQaIKKLLKCPSCDLFQRGALGETALHVAALYDNLEAAVVLME--AAPElvnepmtSDLYQGETALHIA 96
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  647 AKKNQMDIATSLLEYGADANA--VT----RQGIAS--------VHLAAQEGHVDMVSLLLSRNANVNLSNKSGLTPLH-L 711
Cdd:cd22192     97 VVNQNLNLVRELIARGADVVSprATgtffRPGPKNliyygehpLSFAACVGNEEIVRLLIEHGADIRAQDSLGNTVLHiL 176
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 1907073056  712 AAQEDRVNVAEV---LVNQGAHVDAQT------KMGYTPLHVGCHYGNIKIVNFLLQ 759
Cdd:cd22192    177 VLQPNKTFACQMydlILSYDKEDDLQPldlvpnNQGLTPFKLAAKEGNIVMFQHLVQ 233
Ank_2 pfam12796
Ankyrin repeats (3 copies);
742-823 1.99e-15

Ankyrin repeats (3 copies);


Pssm-ID: 432791 [Multi-domain]  Cd Length: 91  Bit Score: 73.23  E-value: 1.99e-15
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  742 LHVGCHYGNIKIVNFLLQHSAKVNAKTKNGYTALHQAAQQGHTHIINVLLQNNASpnELTVNGNTALAIARRLGYISVVD 821
Cdd:pfam12796    1 LMLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLEHADV--NLKDNGRTALHYAARSGHLEIVK 78

                   ..
gi 1907073056  822 TL 823
Cdd:pfam12796   79 LL 80
PLN03192 PLN03192
Voltage-dependent potassium channel; Provisional
515-702 2.49e-15

Voltage-dependent potassium channel; Provisional


Pssm-ID: 215625 [Multi-domain]  Cd Length: 823  Bit Score: 82.22  E-value: 2.49e-15
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  515 ARLGKADIVQQLLQQGASPNAATTSGYTPLHLAAREGHEDVAAFLLDHGASLSITTKKGFTPLHVAAKYGKLEVASLLLQ 594
Cdd:PLN03192   533 ASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYH 612
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  595 KSASPDaagksgltplhvaahydnqkvalllldqgasPHAAAKngytPLHIAAKKNQMDIATSLLEYGADANAVTRQGIA 674
Cdd:PLN03192   613 FASISD-------------------------------PHAAGD----LLCTAAKRNDLTAMKELLKQGLNVDSEDHQGAT 657
                          170       180
                   ....*....|....*....|....*...
gi 1907073056  675 SVHLAAQEGHVDMVSLLLSRNANVNLSN 702
Cdd:PLN03192   658 ALQVAMAEDHVDMVRLLIMNGADVDKAN 685
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
142-363 3.63e-15

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 223738 [Multi-domain]  Cd Length: 235  Bit Score: 77.17  E-value: 3.63e-15
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  142 TPLYMAAQENHLEVVRFLLDNGASQSLATEDGFTPLAVALQQGHDQVVSLLLENDTKGKVRLPALHIAARKDDTKAAALL 221
Cdd:COG0666     13 KCFLDLLLVALLLLLSLDLSNPSDKKLNLYLELALLPAASLSELLLKLIVDRHLAARDLDGRLPLHSAASKGDDKIVKLL 92
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  222 LQNdtNADVeskmvvNRATESGFTPLHIAAHYGN-----INVATLLLNRAAAVDFTARND---ITPLHVASKRGNANMVK 293
Cdd:COG0666     93 LAS--GADV------NAKDADGDTPLHLAALNGNppegnIEVAKLLLEAGADLDVNNLRDedgNTPLHWAALNGDADIVE 164
                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907073056  294 LLLDRGAKIDAKTRDGLTPLHCGARSGHEQVVEMLLDRSAP-ILSKTKNGLSPLHMATQGDHLNCVQLLLQ 363
Cdd:COG0666    165 LLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKGLHlSLLKFNLEGVANANVSKRNILNLTSLIIA 235
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
71-299 1.32e-14

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 223738 [Multi-domain]  Cd Length: 235  Bit Score: 75.25  E-value: 1.32e-14
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056   71 NQNGLNALHLASKEGHVEVVSELLQREA----NVDAATKKGNTALHIASLAGQAEVVKVLVtNGANVNAQSQNGFTPLYM 146
Cdd:COG0666      1 SKPSLSALLLINKCFLDLLLVALLLLLSldlsNPSDKKLNLYLELALLPAASLSELLLKLI-VDRHLAARDLDGRLPLHS 79
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  147 AAQENHLEVVRFLLDNGASQSLATEDGFTPLAVALQQGHDQvvslllendtkgkvrlpalhiaarKDDTKAAALLLQNdt 226
Cdd:COG0666     80 AASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPP------------------------EGNIEVAKLLLEA-- 133
                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907073056  227 nadVESKMVVNRATESGFTPLHIAAHYGNINVATLLLNRAAAVDFTARNDITPLHVASKRGNANMVKLLLDRG 299
Cdd:COG0666    134 ---GADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG 203
Ank_2 pfam12796
Ankyrin repeats (3 copies);
144-275 4.94e-14

Ankyrin repeats (3 copies);


Pssm-ID: 432791 [Multi-domain]  Cd Length: 91  Bit Score: 69.38  E-value: 4.94e-14
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  144 LYMAAQENHLEVVRFLLDNGASQSLATEDGFTPLAVALQQGHDQVVSLLLEndtkgkvrlpalHIAARKDDtkaaalllq 223
Cdd:pfam12796    1 LMLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLE------------HADVNLKD--------- 59
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|..
gi 1907073056  224 ndtnadveskmvvnrateSGFTPLHIAAHYGNINVATLLLNRAAavDFTARN 275
Cdd:pfam12796   60 ------------------NGRTALHYAARSGHLEIVKLLLEKGA--DINVKD 91
TRPV5-6 cd22192
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 5 and 6; TRPV5 and ...
509-731 6.29e-14

Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 5 and 6; TRPV5 and TRPV6 (TRPV5/6) are two homologous members within the vanilloid subfamily of the transient receptor potential (TRP) family. TRPV5 and TRPV6 show only 30-40% homology with other members of the TRP family and have unique properties that differentiates them from other TRP channels. They mediate calcium uptake in epithelia and their expression is dramatically increased in numerous types of cancer. The structure of TRPV5/6 shows the typical topology features of all TRP family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6, which is predicted to form the Ca2+ pore, and large intracellular N- and C-terminal domains. The N-terminal domain of TRPV5/6 contains three ankyrin repeats. This structural element is present in several proteins and plays a role in protein-protein interactions. The N- and C-terminal tails of TRPV5/6 each contain an internal PDZ motif which can function as part of a molecular scaffold via interaction with PDZ-domain containing proteins. A major difference between the properties of TRPV5 and TRPV6 is in their tissue distribution: TRPV5 is predominantly expressed in the distal convoluted tubules (DCT) and connecting tubules (CNT) of the kidney, with limited expression in extrarenal tissues. In contrast, TRPV6 has a broader expression pattern such as expression in the intestine, kidney, placenta, epididymis, exocrine tissues, and a few other tissues.


Pssm-ID: 411976 [Multi-domain]  Cd Length: 609  Bit Score: 76.98  E-value: 6.29e-14
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  509 TPLHISARLGKADIVQQLL-QQGASPNAATTSGYTPLHLAAREGHEDVAAFLLDHGASL---SITTK--KGFTPLHVAAK 582
Cdd:cd22192     19 SPLLLAAKENDVQAIKKLLkCPSCDLFQRGALGETALHVAALYDNLEAAVVLMEAAPELvnePMTSDlyQGETALHIAVV 98
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  583 YGKLEVASLLLQKSA---SPDAAG------KSGLT-----PLHVAAHYDNQKVALLLLDQGASPHAAAKNGYTPLHIAAK 648
Cdd:cd22192     99 NQNLNLVRELIARGAdvvSPRATGtffrpgPKNLIyygehPLSFAACVGNEEIVRLLIEHGADIRAQDSLGNTVLHILVL 178
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  649 KNQMDIATSLLEYgadanavtrqgiasvhLAAQEGHVDMVSLLLsrnanvnLSNKSGLTPLHLAAQEDRVNVAEVLVNQG 728
Cdd:cd22192    179 QPNKTFACQMYDL----------------ILSYDKEDDLQPLDL-------VPNNQGLTPFKLAAKEGNIVMFQHLVQKR 235

                   ...
gi 1907073056  729 AHV 731
Cdd:cd22192    236 RHI 238
PHA02875 PHA02875
ankyrin repeat protein; Provisional
650-823 6.95e-14

ankyrin repeat protein; Provisional


Pssm-ID: 165206 [Multi-domain]  Cd Length: 413  Bit Score: 75.80  E-value: 6.95e-14
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  650 NQMDIATSLLEYGADANAVTRQGIASVHLAAQEGHVDMVSLLLSRNANVNLSNKSGLTPLHLAAQEDRVNVAEVLVNQGA 729
Cdd:PHA02875    13 GELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDVKAVEELLDLGK 92
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  730 HV-DAQTKMGYTPLHVGCHYGNIKIVNFLLQHSAKVNAKTKNGYTALHQAAQQGHTHIINVLLQNNASPNELTVNGNTAL 808
Cdd:PHA02875    93 FAdDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPL 172
                          170
                   ....*....|....*
gi 1907073056  809 AIARRLGYISVVDTL 823
Cdd:PHA02875   173 IIAMAKGDIAICKML 187
PHA02876 PHA02876
ankyrin repeat protein; Provisional
617-823 1.05e-13

ankyrin repeat protein; Provisional


Pssm-ID: 165207 [Multi-domain]  Cd Length: 682  Bit Score: 76.64  E-value: 1.05e-13
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  617 DNQKVALLLLDQGASPHAAAKNGYTPLHIAAKKNQMDIATSLLEYGADANAVTRQGIASVHLAAQEGHVDMVSLLLSRNA 696
Cdd:PHA02876   156 DELLIAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKNIDTIKAIIDNRS 235
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  697 NVnlsNKSGLTPLHLAAQEDrVNVAEVLVNQGAHVDAQTKMGYTPLHVGCHYGNI-KIVNFLLQHSAKVNAKTKNGYTAL 775
Cdd:PHA02876   236 NI---NKNDLSLLKAIRNED-LETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLsRLVPKLLERGADVNAKNIKGETPL 311
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|
gi 1907073056  776 HQAAQQGH-THIINVLLQNNASPNELTVNGNTALAIARRLG-YISVVDTL 823
Cdd:PHA02876   312 YLMAKNGYdTENIRTLIMLGADVNAADRLYITPLHQASTLDrNKDIVITL 361
TRPV3 cd22194
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), type 3; TRPV3 is a ...
471-596 1.60e-13

Transient Receptor Potential channel, Vanilloid subfamily (TRPV), type 3; TRPV3 is a temperature-sensitive Transient Receptor Potential (TRP) ion channel that is activated by warm temperatures, synthetic small-molecule chemicals, and natural compounds from plants. TRPV3 function is regulated by physiological factors such as extracellular divalent cations and acidic pH, intracellular adenosine triphosphate, membrane voltage, and arachidonic acid. It is expressed in both neuronal and non-neuronal tissues including epidermal keratinocytes, epithelial cells in the gut, endothelial cells in blood vessels, and neurons in dorsal root ganglia and CNS. TRPV3 null mice have abnormal hair morphogenesis and compromised skin barrier function. It may play roles in inflammatory skin disorders, such as itch and pain sensation. TRPV3 is also expressed by many neuronal and non-neuronal tissues, showing that TRPV3 might play roles in other unknown cellular and physiological functions. TRPV3 belongs to the vanilloid TRP subfamily (TRPV), named after the founding member vanilloid receptor 1 (TRPV1). The structure of TRPV shows the typical topology features of all TRP ion channel family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6 and large intracellular N- and C-terminal domains.


Pssm-ID: 411978 [Multi-domain]  Cd Length: 680  Bit Score: 75.95  E-value: 1.60e-13
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  471 NVRGETALHMAARSGQAEVVRYLVQDGAQVEAKAKDD--------------QTPLHISARLGKADIVQQLLQQGASPNAA 536
Cdd:cd22194    138 AYEGQTALNIAIERRQGDIVKLLIAKGADVNAHAKGVffnpkykhegfyfgETPLALAACTNQPEIVQLLMEKESTDITS 217
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907073056  537 TTS-GYTPLH--LAAREGHEDVAAF--------LLDH-GASL-SITTKKGFTPLHVAAKYGKLEVASLLLQKS 596
Cdd:cd22194    218 QDSrGNTVLHalVTVAEDSKTQNDFvkrmydmiLLKSeNKNLeTIRNNEGLTPLQLAAKMGKAEILKYILSRE 290
trp TIGR00870
transient-receptor-potential calcium channel protein; The Transient Receptor Potential Ca2+ ...
385-594 2.30e-13

transient-receptor-potential calcium channel protein; The Transient Receptor Potential Ca2+ Channel (TRP-CC) Family (TC. 1.A.4)The TRP-CC family has also been called the store-operated calcium channel (SOC) family. The prototypical members include the Drosophila retinal proteinsTRP and TRPL (Montell and Rubin, 1989; Hardie and Minke, 1993). SOC members of the family mediate the entry of extracellular Ca2+ into cells in responseto depletion of intracellular Ca2+ stores (Clapham, 1996) and agonist stimulated production of inositol-1,4,5 trisphosphate (IP3). One member of the TRP-CCfamily, mammalian Htrp3, has been shown to form a tight complex with the IP3 receptor (TC #1.A.3.2.1). This interaction is apparently required for IP3 tostimulate Ca2+ release via Htrp3. The vanilloid receptor subtype 1 (VR1), which is the receptor for capsaicin (the ?hot? ingredient in chili peppers) and servesas a heat-activated ion channel in the pain pathway (Caterina et al., 1997), is also a member of this family. The stretch-inhibitable non-selective cation channel(SIC) is identical to the vanilloid receptor throughout all of its first 700 residues, but it exhibits a different sequence in its last 100 residues. VR1 and SICtransport monovalent cations as well as Ca2+. VR1 is about 10x more permeable to Ca2+ than to monovalent ions. Ca2+ overload probably causes cell deathafter chronic exposure to capsaicin. (McCleskey and Gold, 1999). [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273311 [Multi-domain]  Cd Length: 743  Bit Score: 75.50  E-value: 2.30e-13
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  385 CGHYKVAKVLLDKKASPNAKALN-------GFTPLHIACKKNRIR-VMELLLKHGASIqavtESGLTPIHVAAfMGHVNI 456
Cdd:TIGR00870   22 LPAAERGDLASVYRDLEEPKKLNincpdrlGRSALFVAAIENENLeLTELLLNLSCRG----AVGDTLLHAIS-LEYVDA 96
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  457 VSQLM-----HHGASPNTTNV---------RGETALHMAARSGQAEVVRYLVQDGAQVEAKAKDD--------------Q 508
Cdd:TIGR00870   97 VEAILlhllaAFRKSGPLELAndqytseftPGITALHLAAHRQNYEIVKLLLERGASVPARACGDffvksqgvdsfyhgE 176
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  509 TPLHISARLGKADIVQQLLQQGASPNAATTSGYTPLHLAAREGHEDVA---------AFLLDHGASLS-------ITTKK 572
Cdd:TIGR00870  177 SPLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLLVMENEFKAEyeelscqmyNFALSLLDKLRdskelevILNHQ 256
                          250       260
                   ....*....|....*....|..
gi 1907073056  573 GFTPLHVAAKYGKLEVASLLLQ 594
Cdd:TIGR00870  257 GLTPLKLAAKEGRIVLFRLKLA 278
PLN03192 PLN03192
Voltage-dependent potassium channel; Provisional
424-577 1.00e-12

Voltage-dependent potassium channel; Provisional


Pssm-ID: 215625 [Multi-domain]  Cd Length: 823  Bit Score: 73.75  E-value: 1.00e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  424 MELLLKHGASIQAVTESGLTPIHVAAFMGHVNIVSQLMHHGASPNTTNVRGETALHMAARSGQAEVVRYLVQDGAQVEAK 503
Cdd:PLN03192   541 LEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHFASISDPH 620
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1907073056  504 AKDDQtpLHISARLGKADIVQQLLQQGASPNAATTSGYTPLHLAAREGHEDVAAFLLDHGASL-SITTKKGFTPL 577
Cdd:PLN03192   621 AAGDL--LCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVdKANTDDDFSPT 693
TRPV3 cd22194
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), type 3; TRPV3 is a ...
106-265 1.23e-12

Transient Receptor Potential channel, Vanilloid subfamily (TRPV), type 3; TRPV3 is a temperature-sensitive Transient Receptor Potential (TRP) ion channel that is activated by warm temperatures, synthetic small-molecule chemicals, and natural compounds from plants. TRPV3 function is regulated by physiological factors such as extracellular divalent cations and acidic pH, intracellular adenosine triphosphate, membrane voltage, and arachidonic acid. It is expressed in both neuronal and non-neuronal tissues including epidermal keratinocytes, epithelial cells in the gut, endothelial cells in blood vessels, and neurons in dorsal root ganglia and CNS. TRPV3 null mice have abnormal hair morphogenesis and compromised skin barrier function. It may play roles in inflammatory skin disorders, such as itch and pain sensation. TRPV3 is also expressed by many neuronal and non-neuronal tissues, showing that TRPV3 might play roles in other unknown cellular and physiological functions. TRPV3 belongs to the vanilloid TRP subfamily (TRPV), named after the founding member vanilloid receptor 1 (TRPV1). The structure of TRPV shows the typical topology features of all TRP ion channel family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6 and large intracellular N- and C-terminal domains.


Pssm-ID: 411978 [Multi-domain]  Cd Length: 680  Bit Score: 73.25  E-value: 1.23e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  106 KGNTALHIASLAGQAEVVKVLVTNGANVNAQSQNGF--------------TPLYMAAQENHLEVVRFLLDNGasqslate 171
Cdd:cd22194    140 EGQTALNIAIERRQGDIVKLLIAKGADVNAHAKGVFfnpkykhegfyfgeTPLALAACTNQPEIVQLLMEKE-------- 211
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  172 dgftPLAVALQqghdqvvslllenDTKGKVRLPALHIAArkDDTKAaalllQNDTNADVESKMVVNRATES--------G 243
Cdd:cd22194    212 ----STDITSQ-------------DSRGNTVLHALVTVA--EDSKT-----QNDFVKRMYDMILLKSENKNletirnneG 267
                          170       180
                   ....*....|....*....|..
gi 1907073056  244 FTPLHIAAHYGNINVATLLLNR 265
Cdd:cd22194    268 LTPLQLAAKMGKAEILKYILSR 289
PHA02798 PHA02798
ankyrin-like protein; Provisional
87-313 1.54e-12

ankyrin-like protein; Provisional


Pssm-ID: 222931 [Multi-domain]  Cd Length: 489  Bit Score: 72.17  E-value: 1.54e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056   87 VEVVSELLQREANVDAATKKGNTAL-----HIASLAGQAEVVKVLVTNGANVNAQSQNGFTPLYMAAQE---NHLEVVRF 158
Cdd:PHA02798    51 TDIVKLFINLGANVNGLDNEYSTPLctilsNIKDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNgyiNNLEILLF 130
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  159 LLDNGASQSLATEDGFTPLAVALQQGHD---QVVSLLLE-----NDTKGKVRLPALHIAARKD----DTKAAALLLQNDT 226
Cdd:PHA02798   131 MIENGADTTLLDKDGFTMLQVYLQSNHHidiEIIKLLLEkgvdiNTHNNKEKYDTLHCYFKYNidriDADILKLFVDNGF 210
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  227 NADVEskmvvNRATESGFTPLHIAAHYGNINVATLLLNRA-AAVDFTARN--DITPLHVASKRGNANMVKLLLDRGAKID 303
Cdd:PHA02798   211 IINKE-----NKSHKKKFMEYLNSLLYDNKRFKKNILDFIfSYIDINQVDelGFNPLYYSVSHNNRKIFEYLLQLGGDIN 285
                          250
                   ....*....|
gi 1907073056  304 AKTRDGLTPL 313
Cdd:PHA02798   286 IITELGNTCL 295
TRPV5-6 cd22192
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 5 and 6; TRPV5 and ...
142-363 3.77e-12

Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 5 and 6; TRPV5 and TRPV6 (TRPV5/6) are two homologous members within the vanilloid subfamily of the transient receptor potential (TRP) family. TRPV5 and TRPV6 show only 30-40% homology with other members of the TRP family and have unique properties that differentiates them from other TRP channels. They mediate calcium uptake in epithelia and their expression is dramatically increased in numerous types of cancer. The structure of TRPV5/6 shows the typical topology features of all TRP family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6, which is predicted to form the Ca2+ pore, and large intracellular N- and C-terminal domains. The N-terminal domain of TRPV5/6 contains three ankyrin repeats. This structural element is present in several proteins and plays a role in protein-protein interactions. The N- and C-terminal tails of TRPV5/6 each contain an internal PDZ motif which can function as part of a molecular scaffold via interaction with PDZ-domain containing proteins. A major difference between the properties of TRPV5 and TRPV6 is in their tissue distribution: TRPV5 is predominantly expressed in the distal convoluted tubules (DCT) and connecting tubules (CNT) of the kidney, with limited expression in extrarenal tissues. In contrast, TRPV6 has a broader expression pattern such as expression in the intestine, kidney, placenta, epididymis, exocrine tissues, and a few other tissues.


Pssm-ID: 411976 [Multi-domain]  Cd Length: 609  Bit Score: 71.20  E-value: 3.77e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  142 TPLYMAAQENHLEVVRFLLDNgasqslATEDGFTplavalqqghdqvvslllendtKGKVRLPALHIAARKDDTKAAALL 221
Cdd:cd22192     19 SPLLLAAKENDVQAIKKLLKC------PSCDLFQ----------------------RGALGETALHVAALYDNLEAAVVL 70
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  222 LQNDTNadveskmVVNRATES----GFTPLHIAAHYGNINVATLLLNRAAAVdFTARNDIT---------------PLHV 282
Cdd:cd22192     71 MEAAPE-------LVNEPMTSdlyqGETALHIAVVNQNLNLVRELIARGADV-VSPRATGTffrpgpknliyygehPLSF 142
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  283 ASKRGNANMVKLLLDRGAKIDAKTRDGLTPLH-----------CgarsgheQVVEMLL-----DRSAPiLSKTKN--GLS 344
Cdd:cd22192    143 AACVGNEEIVRLLIEHGADIRAQDSLGNTVLHilvlqpnktfaC-------QMYDLILsydkeDDLQP-LDLVPNnqGLT 214
                          250
                   ....*....|....*....
gi 1907073056  345 PLHMATQGDHLNCVQLLLQ 363
Cdd:cd22192    215 PFKLAAKEGNIVMFQHLVQ 233
TRPV5-6 cd22192
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 5 and 6; TRPV5 and ...
377-595 4.75e-12

Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 5 and 6; TRPV5 and TRPV6 (TRPV5/6) are two homologous members within the vanilloid subfamily of the transient receptor potential (TRP) family. TRPV5 and TRPV6 show only 30-40% homology with other members of the TRP family and have unique properties that differentiates them from other TRP channels. They mediate calcium uptake in epithelia and their expression is dramatically increased in numerous types of cancer. The structure of TRPV5/6 shows the typical topology features of all TRP family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6, which is predicted to form the Ca2+ pore, and large intracellular N- and C-terminal domains. The N-terminal domain of TRPV5/6 contains three ankyrin repeats. This structural element is present in several proteins and plays a role in protein-protein interactions. The N- and C-terminal tails of TRPV5/6 each contain an internal PDZ motif which can function as part of a molecular scaffold via interaction with PDZ-domain containing proteins. A major difference between the properties of TRPV5 and TRPV6 is in their tissue distribution: TRPV5 is predominantly expressed in the distal convoluted tubules (DCT) and connecting tubules (CNT) of the kidney, with limited expression in extrarenal tissues. In contrast, TRPV6 has a broader expression pattern such as expression in the intestine, kidney, placenta, epididymis, exocrine tissues, and a few other tissues.


Pssm-ID: 411976 [Multi-domain]  Cd Length: 609  Bit Score: 71.20  E-value: 4.75e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  377 TALHVAAHCGHYKVAKVLLDkkASP-------NAKALNGFTPLHIACKKNRIRVMELLLKHGASIQAVTESGLtpihvaA 449
Cdd:cd22192     53 TALHVAALYDNLEAAVVLME--AAPelvnepmTSDLYQGETALHIAVVNQNLNLVRELIARGADVVSPRATGT------F 124
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  450 FmghvnivsqlmhhgaSPNTTNV--RGETALHMAARSGQAEVVRYLVQDGAQVEAKAKDDQTPLHISARLGKADIVQQLL 527
Cdd:cd22192    125 F---------------RPGPKNLiyYGEHPLSFAACVGNEEIVRLLIEHGADIRAQDSLGNTVLHILVLQPNKTFACQMY 189
                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907073056  528 QQgaspnaattsgytplhLAAREGHEDVAAflLDHgaslsITTKKGFTPLHVAAKYGKLEVASLLLQK 595
Cdd:cd22192    190 DL----------------ILSYDKEDDLQP--LDL-----VPNNQGLTPFKLAAKEGNIVMFQHLVQK 234
Ank_4 pfam13637
Ankyrin repeats (many copies);
540-593 2.77e-11

Ankyrin repeats (many copies);


Pssm-ID: 372654 [Multi-domain]  Cd Length: 54  Bit Score: 60.37  E-value: 2.77e-11
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1907073056  540 GYTPLHLAAREGHEDVAAFLLDHGASLSITTKKGFTPLHVAAKYGKLEVASLLL 593
Cdd:pfam13637    1 ELTALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLLL 54
PHA02946 PHA02946
ankyin-like protein; Provisional
592-803 3.50e-11

ankyin-like protein; Provisional


Pssm-ID: 165256 [Multi-domain]  Cd Length: 446  Bit Score: 67.77  E-value: 3.50e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  592 LLQKSASPDAAGKSGLTPLHVAAHYDNQKVALLLLDQGASPHAAAKNGYTPLHIAAKKNQ--MDIATSLLEYGADA-NAV 668
Cdd:PHA02946    58 LLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDevIERINLLVQYGAKInNSV 137
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  669 TRQGIASVhLAAQEGHVDMVSLLLSRNANVNLSNKSGLTPL--HLAAQEDRVNVAEVLVNQGAHVDAQTKMGYTPLHVGC 746
Cdd:PHA02946   138 DEEGCGPL-LACTDPSERVFKKIMSIGFEARIVDKFGKNHIhrHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHIVC 216
                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  747 H--YGNIKIVNFLLQhSAKVNAKTKNGYTALHQAAQQ-GHTHIINVLLQNNASPNELTVN 803
Cdd:PHA02946   217 SktVKNVDIINLLLP-STDVNKQNKFGDSPLTLLIKTlSPAHLINKLLSTSNVITDQTVN 275
TRPV5-6 cd22192
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 5 and 6; TRPV5 and ...
78-265 3.71e-11

Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 5 and 6; TRPV5 and TRPV6 (TRPV5/6) are two homologous members within the vanilloid subfamily of the transient receptor potential (TRP) family. TRPV5 and TRPV6 show only 30-40% homology with other members of the TRP family and have unique properties that differentiates them from other TRP channels. They mediate calcium uptake in epithelia and their expression is dramatically increased in numerous types of cancer. The structure of TRPV5/6 shows the typical topology features of all TRP family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6, which is predicted to form the Ca2+ pore, and large intracellular N- and C-terminal domains. The N-terminal domain of TRPV5/6 contains three ankyrin repeats. This structural element is present in several proteins and plays a role in protein-protein interactions. The N- and C-terminal tails of TRPV5/6 each contain an internal PDZ motif which can function as part of a molecular scaffold via interaction with PDZ-domain containing proteins. A major difference between the properties of TRPV5 and TRPV6 is in their tissue distribution: TRPV5 is predominantly expressed in the distal convoluted tubules (DCT) and connecting tubules (CNT) of the kidney, with limited expression in extrarenal tissues. In contrast, TRPV6 has a broader expression pattern such as expression in the intestine, kidney, placenta, epididymis, exocrine tissues, and a few other tissues.


Pssm-ID: 411976 [Multi-domain]  Cd Length: 609  Bit Score: 68.12  E-value: 3.71e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056   78 LHLASKEGHVEVVSELL-QREANVDAATKKGNTALHIASLAGQAEVVKVLVTNG---ANVNAQSQ--NGFTPLYMAAQEN 151
Cdd:cd22192     21 LLLAAKENDVQAIKKLLkCPSCDLFQRGALGETALHVAALYDNLEAAVVLMEAApelVNEPMTSDlyQGETALHIAVVNQ 100
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  152 HLEVVRFLLDNGASQSLATEDG--FT------------PLAVALQQGHDQVVSLLLEN--DTKGKVRL--PALHIAARKD 213
Cdd:cd22192    101 NLNLVRELIARGADVVSPRATGtfFRpgpknliyygehPLSFAACVGNEEIVRLLIEHgaDIRAQDSLgnTVLHILVLQP 180
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 1907073056  214 DTKAAA----LLLQNDTNADVES-KMVVNRAtesGFTPLHIAAHYGNINVATLLLNR 265
Cdd:cd22192    181 NKTFACqmydLILSYDKEDDLQPlDLVPNNQ---GLTPFKLAAKEGNIVMFQHLVQK 234
PLN03192 PLN03192
Voltage-dependent potassium channel; Provisional
51-177 4.58e-11

Voltage-dependent potassium channel; Provisional


Pssm-ID: 215625 [Multi-domain]  Cd Length: 823  Bit Score: 67.97  E-value: 4.58e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056   51 AGHLEkalDYIKNGVDVNICNQNGLNALHLASKEGHVEVVSELLQREANVDAATKKGNTAL----------------HIA 114
Cdd:PLN03192   538 AALLE---ELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALwnaisakhhkifrilyHFA 614
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907073056  115 SLA---------------GQAEVVKVLVTNGANVNAQSQNGFTPLYMAAQENHLEVVRFLLDNGASQSLA-TEDGFTPL 177
Cdd:PLN03192   615 SISdphaagdllctaakrNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDKAnTDDDFSPT 693
Ank_4 pfam13637
Ankyrin repeats (many copies);
278-329 4.97e-11

Ankyrin repeats (many copies);


Pssm-ID: 372654 [Multi-domain]  Cd Length: 54  Bit Score: 59.60  E-value: 4.97e-11
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|..
gi 1907073056  278 TPLHVASKRGNANMVKLLLDRGAKIDAKTRDGLTPLHCGARSGHEQVVEMLL 329
Cdd:pfam13637    3 TALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLLL 54
PLN03192 PLN03192
Voltage-dependent potassium channel; Provisional
342-471 5.07e-11

Voltage-dependent potassium channel; Provisional


Pssm-ID: 215625 [Multi-domain]  Cd Length: 823  Bit Score: 67.97  E-value: 5.07e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  342 GLSPLHMATQGDHLNCVQLLLQH--NVPVDDVTNDylTALHVAAHCGHYKVAKVLLDKKASPNAKAlnGFTPLHIACKKN 419
Cdd:PLN03192   558 GRTPLHIAASKGYEDCVLVLLKHacNVHIRDANGN--TALWNAISAKHHKIFRILYHFASISDPHA--AGDLLCTAAKRN 633
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|..
gi 1907073056  420 RIRVMELLLKHGASIQAVTESGLTPIHVAAFMGHVNIVSQLMHHGASPNTTN 471
Cdd:PLN03192   634 DLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDKAN 685
Ank_4 pfam13637
Ankyrin repeats (many copies);
441-494 6.05e-11

Ankyrin repeats (many copies);


Pssm-ID: 372654 [Multi-domain]  Cd Length: 54  Bit Score: 59.21  E-value: 6.05e-11
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1907073056  441 GLTPIHVAAFMGHVNIVSQLMHHGASPNTTNVRGETALHMAARSGQAEVVRYLV 494
Cdd:pfam13637    1 ELTALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLLL 54
TRPV cd21882
Transient Receptor Potential channel, Vanilloid subfamily (TRPV); The vanilloid TRP subfamily ...
377-598 6.58e-11

Transient Receptor Potential channel, Vanilloid subfamily (TRPV); The vanilloid TRP subfamily (TRPV), named after the vanilloid receptor 1 (TRPV1), consists of six members: four thermo-sensing channels (TRPV1, TRPV2, TRPV3, and TRPV4) and two Ca2+ selective channels (TRPV5 and TRPV6). The calcium-selective channels TRPV5 and TRPV6 can be heterotetramers and are important for general Ca2+ homeostasis. All four channels within the TRPV1-4 group show temperature-invoked currents when expressed in heterologous cell systems, ranging from activation at ~25C for TRPV4 to ~52C for TRPV2. The structure of TRPV shows the typical topology features of all Transient Receptor Potential (TRP) ion channel family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6 and large intracellular N- and C-terminal domains. The TRP family consists of membrane proteins that function as ion channels that communicate between the cell and its environment, by a vast array of physical or chemical stimuli, including radiation (in the form of temperature, infrared ,or light) and pressure (osmotic or mechanical). TRP channels are formed by a tetrameric complex of channel subunits. Based on sequence identity, the mammalian TRP channel family is classified into six subfamilies, with significant sequence similarity within the transmembrane domains, but very low similarity in their N- and C-terminal cytoplasmic regions. The six subfamilies are named based on their first member: TRPC (canonical), TRPV (vanilloid), TRPM (melastatin), TRPA (ankyrin), TRPML (mucolipin), and TRPP (polycystic).


Pssm-ID: 411975 [Multi-domain]  Cd Length: 600  Bit Score: 67.21  E-value: 6.58e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  377 TALHVAA---HCGHYKVAKVLLD-KKASPNAKAL----------NGFTPLHIACKKNRIRVMELLLKHGASIQAVTESgl 442
Cdd:cd21882     28 TCLHKAAlnlNDGVNEAIMLLLEaAPDSGNPKELvnapctdefyQGQTALHIAIENRNLNLVRLLVENGADVSARATG-- 105
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  443 tpihvAAFMGHvnivsqlmhhgasPNTTNVRGETALHMAARSGQAEVVRYLVQDGAQVEAKAKDD---QTPLHIsarlgk 519
Cdd:cd21882    106 -----RFFRKS-------------PGNLFYFGELPLSLAACTNQEEIVRLLLENGAQPAALEAQDslgNTVLHA------ 161
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  520 adIVQQLLQQGASPNAATTSGYTPLHLAAReghedvaaflLDHGASLS-ITTKKGFTPLHVAAKYGKLEVASLLLQKSAS 598
Cdd:cd21882    162 --LVLQADNTPENSAFVCQMYNLLLSYGAH----------LDPTQQLEeIPNHQGLTPLKLAAVEGKIVMFQHILQREFS 229
Ank_4 pfam13637
Ankyrin repeats (many copies);
375-428 7.43e-11

Ankyrin repeats (many copies);


Pssm-ID: 372654 [Multi-domain]  Cd Length: 54  Bit Score: 58.83  E-value: 7.43e-11
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1907073056  375 YLTALHVAAHCGHYKVAKVLLDKKASPNAKALNGFTPLHIACKKNRIRVMELLL 428
Cdd:pfam13637    1 ELTALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLLL 54
PHA02798 PHA02798
ankyrin-like protein; Provisional
488-789 1.08e-10

ankyrin-like protein; Provisional


Pssm-ID: 222931 [Multi-domain]  Cd Length: 489  Bit Score: 66.40  E-value: 1.08e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  488 EVVRYLVQDGAQVEAKAKDDQTPL-----HISARLGKADIVQQLLQQGASPNAATTSGYTPLHLAAREGH---EDVAAFL 559
Cdd:PHA02798    52 DIVKLFINLGANVNGLDNEYSTPLctilsNIKDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGYinnLEILLFM 131
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  560 LDHGASLSITTKKGFTPLHVAAKYG---KLEVASLLLQKSASPDA-AGKSGLTPLHVAAHYD----NQKVALLLLDQGAS 631
Cdd:PHA02798   132 IENGADTTLLDKDGFTMLQVYLQSNhhiDIEIIKLLLEKGVDINThNNKEKYDTLHCYFKYNidriDADILKLFVDNGFI 211
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  632 PHAAAKngytplhiAAKKNQMDIATSLLEYGADANAvtrqgiasvhlaaqeghvDMVSLLLSRnANVNLSNKSGLTPLHL 711
Cdd:PHA02798   212 INKENK--------SHKKKFMEYLNSLLYDNKRFKK------------------NILDFIFSY-IDINQVDELGFNPLYY 264
                          250       260       270       280       290       300       310
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907073056  712 AAQEDRVNVAEVLVNQGAHVDAQTKMGYTPLHVGCHYGNIKIVNFLLQHsaKVNAKT-KNGYTALHQaaqqghtHIINV 789
Cdd:PHA02798   265 SVSHNNRKIFEYLLQLGGDINIITELGNTCLFTAFENESKFIFNSILNK--KPNKNTiSYTYYKLRK-------HILNV 334
PLN03192 PLN03192
Voltage-dependent potassium channel; Provisional
355-546 1.17e-10

Voltage-dependent potassium channel; Provisional


Pssm-ID: 215625 [Multi-domain]  Cd Length: 823  Bit Score: 66.82  E-value: 1.17e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  355 LNCVQLLLQHNVPVDDVTNDylTALHVAAHCGHYKVAKVLLDKKASPNAKALNGFTPLHIACKKNRIRVMELLLKHGASI 434
Cdd:PLN03192   507 LNVGDLLGDNGGEHDDPNMA--SNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNV 584
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  435 QAVTESGLTPIHVAAFMGHVNIVsQLMHHGASPNTTNVRGETaLHMAARSGQAEVVRYLVQDGAQVEAKAKDDQTPLHIS 514
Cdd:PLN03192   585 HIRDANGNTALWNAISAKHHKIF-RILYHFASISDPHAAGDL-LCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVA 662
                          170       180       190
                   ....*....|....*....|....*....|...
gi 1907073056  515 ARLGKADIVQQLLQQGASPNAATT-SGYTPLHL 546
Cdd:PLN03192   663 MAEDHVDMVRLLIMNGADVDKANTdDDFSPTEL 695
TRPV cd21882
Transient Receptor Potential channel, Vanilloid subfamily (TRPV); The vanilloid TRP subfamily ...
573-744 1.24e-10

Transient Receptor Potential channel, Vanilloid subfamily (TRPV); The vanilloid TRP subfamily (TRPV), named after the vanilloid receptor 1 (TRPV1), consists of six members: four thermo-sensing channels (TRPV1, TRPV2, TRPV3, and TRPV4) and two Ca2+ selective channels (TRPV5 and TRPV6). The calcium-selective channels TRPV5 and TRPV6 can be heterotetramers and are important for general Ca2+ homeostasis. All four channels within the TRPV1-4 group show temperature-invoked currents when expressed in heterologous cell systems, ranging from activation at ~25C for TRPV4 to ~52C for TRPV2. The structure of TRPV shows the typical topology features of all Transient Receptor Potential (TRP) ion channel family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6 and large intracellular N- and C-terminal domains. The TRP family consists of membrane proteins that function as ion channels that communicate between the cell and its environment, by a vast array of physical or chemical stimuli, including radiation (in the form of temperature, infrared ,or light) and pressure (osmotic or mechanical). TRP channels are formed by a tetrameric complex of channel subunits. Based on sequence identity, the mammalian TRP channel family is classified into six subfamilies, with significant sequence similarity within the transmembrane domains, but very low similarity in their N- and C-terminal cytoplasmic regions. The six subfamilies are named based on their first member: TRPC (canonical), TRPV (vanilloid), TRPM (melastatin), TRPA (ankyrin), TRPML (mucolipin), and TRPP (polycystic).


Pssm-ID: 411975 [Multi-domain]  Cd Length: 600  Bit Score: 66.44  E-value: 1.24e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  573 GFTPLHVAAKY---GKLEVASLLLQ---KSASPDAAGKS--------GLTPLHVAAHYDNQKVALLLLDQGASPHAAAKN 638
Cdd:cd21882     26 GKTCLHKAALNlndGVNEAIMLLLEaapDSGNPKELVNApctdefyqGQTALHIAIENRNLNLVRLLVENGADVSARATG 105
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  639 -------------GYTPLHIAAKKNQMDIATSLLEYGADANAVTRQ---GIASVHLAAQEGH---------VDMVSLLLS 693
Cdd:cd21882    106 rffrkspgnlfyfGELPLSLAACTNQEEIVRLLLENGAQPAALEAQdslGNTVLHALVLQADntpensafvCQMYNLLLS 185
                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907073056  694 RNANVN-------LSNKSGLTPLHLAAQEDRVNVAEVLVNQGAHVDAQ------TKMGYTPLHV 744
Cdd:cd21882    186 YGAHLDptqqleeIPNHQGLTPLKLAAVEGKIVMFQHILQREFSGPYQplsrkfTEWTYGPVTS 249
Ank_4 pfam13637
Ankyrin repeats (many copies);
410-458 1.74e-10

Ankyrin repeats (many copies);


Pssm-ID: 372654 [Multi-domain]  Cd Length: 54  Bit Score: 58.05  E-value: 1.74e-10
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*....
gi 1907073056  410 TPLHIACKKNRIRVMELLLKHGASIQAVTESGLTPIHVAAFMGHVNIVS 458
Cdd:pfam13637    3 TALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLK 51
TRPV1 cd22196
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), type 1; Vanilloid receptor 1 ...
473-595 1.91e-10

Transient Receptor Potential channel, Vanilloid subfamily (TRPV), type 1; Vanilloid receptor 1 (TRPV1), a capsaicin (vanilloid) receptor, is the founding member of the vanilloid TRP subfamily (TRPV). In humans, it is expressed in the brain, kidney, pancreas, testis, uterus, spleen, stomach, small intestine, lung and liver. TRPV1 has been implicated to have function in thermo-sensation (heat), autonomic thermoregulation, nociception, food intake regulation, and multiple functions in the gastrointestinal (GI) tract. The receptor has also been involved in growth cone guidance, long-term depression, endocannabinoid signaling and osmosensing in the central nervous system. TRPV1 is up regulated in several human pathological conditions including vulvodynia, GI inflammation, Crohn's disease and ulcerative colitis. TRPV1 knock-out mice exhibit impaired sensation to thermal-mechanical acute pain. The structure of TRPV shows the typical topology features of all Transient Receptor Potential (TRP) ion channel family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6 and large intracellular N- and C-terminal domains.


Pssm-ID: 411980 [Multi-domain]  Cd Length: 649  Bit Score: 65.98  E-value: 1.91e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  473 RGETALHMAARSGQAEVVRYLVQDGAQVEAKAKDD--------------QTPLHISARLGKADIVQQLLQQGASPN--AA 536
Cdd:cd22196     93 KGQTALHIAIERRNMHLVELLVQNGADVHARASGEffkkkkggpgfyfgELPLSLAACTNQLDIVKFLLENPHSPAdiSA 172
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907073056  537 TTS-GYTPLH--LAAREGHEDVAAF-------LLDHGASL-------SITTKKGFTPLHVAAKYGKLEVASLLLQK 595
Cdd:cd22196    173 RDSmGNTVLHalVEVADNTPENTKFvtkmyneILILGAKIrpllkleEITNKKGLTPLKLAAKTGKIGIFAYILGR 248
PHA02946 PHA02946
ankyin-like protein; Provisional
523-814 2.00e-10

ankyin-like protein; Provisional


Pssm-ID: 165256 [Multi-domain]  Cd Length: 446  Bit Score: 65.46  E-value: 2.00e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  523 VQQLLQQGASPNAATTSGYTPLHLAAREGHEDVAAFLLDHGASLSITTKKGFTPLHVAAKYGK--LEVASLLLQKSAS-P 599
Cdd:PHA02946    55 VEELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDevIERINLLVQYGAKiN 134
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  600 DAAGKSGLTPLhVAAHYDNQKVALLLLDQGASPHAAAKNGYTPL--HIAAKKNQMDIATSLLEYGADANAVTRQGIASVH 677
Cdd:PHA02946   135 NSVDEEGCGPL-LACTDPSERVFKKIMSIGFEARIVDKFGKNHIhrHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLH 213
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  678 LAAQE--GHVDMVSLLLSrNANVNLSNKSGLTPLHLAAQE----------------------------DRVNVAEVLVNQ 727
Cdd:PHA02946   214 IVCSKtvKNVDIINLLLP-STDVNKQNKFGDSPLTLLIKTlspahlinkllstsnvitdqtvnicifyDRDDVLEIINDK 292
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  728 GAHVDAqtkmgyTPLHVGCHYGNIKIVNFLLQHSAKVNaktkngyTALHQAAQQGHTHIINVLLQNNASPnELTVNGNTA 807
Cdd:PHA02946   293 GKQYDS------TDFKMAVEVGSIRCVKYLLDNDIICE-------DAMYYAVLSEYETMVDYLLFNHFSV-DSVVNGHTC 358

                   ....*..
gi 1907073056  808 LAIARRL 814
Cdd:PHA02946   359 MSECVRL 365
Ank_4 pfam13637
Ankyrin repeats (many copies);
738-791 2.60e-10

Ankyrin repeats (many copies);


Pssm-ID: 372654 [Multi-domain]  Cd Length: 54  Bit Score: 57.28  E-value: 2.60e-10
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1907073056  738 GYTPLHVGCHYGNIKIVNFLLQHSAKVNAKTKNGYTALHQAAQQGHTHIINVLL 791
Cdd:pfam13637    1 ELTALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLLL 54
Ank_4 pfam13637
Ankyrin repeats (many copies);
107-160 2.65e-10

Ankyrin repeats (many copies);


Pssm-ID: 372654 [Multi-domain]  Cd Length: 54  Bit Score: 57.28  E-value: 2.65e-10
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1907073056  107 GNTALHIASLAGQAEVVKVLVTNGANVNAQSQNGFTPLYMAAQENHLEVVRFLL 160
Cdd:pfam13637    1 ELTALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLLL 54
Ank_4 pfam13637
Ankyrin repeats (many copies);
74-127 8.08e-10

Ankyrin repeats (many copies);


Pssm-ID: 372654 [Multi-domain]  Cd Length: 54  Bit Score: 56.13  E-value: 8.08e-10
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1907073056   74 GLNALHLASKEGHVEVVSELLQREANVDAATKKGNTALHIASLAGQAEVVKVLV 127
Cdd:pfam13637    1 ELTALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLLL 54
Ank_4 pfam13637
Ankyrin repeats (many copies);
639-692 1.07e-09

Ankyrin repeats (many copies);


Pssm-ID: 372654 [Multi-domain]  Cd Length: 54  Bit Score: 55.74  E-value: 1.07e-09
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1907073056  639 GYTPLHIAAKKNQMDIATSLLEYGADANAVTRQGIASVHLAAQEGHVDMVSLLL 692
Cdd:pfam13637    1 ELTALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLLL 54
PTZ00322 PTZ00322
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
115-193 1.22e-09

6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional


Pssm-ID: 140343 [Multi-domain]  Cd Length: 664  Bit Score: 63.38  E-value: 1.22e-09
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907073056  115 SLAGQAEVVKVLVTNGANVNAQSQNGFTPLYMAAQENHLEVVRFLLDNGASQSLATEDGFTPLAVALQQGHDQVVSLLL 193
Cdd:PTZ00322    90 AASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLS 168
TRPV5-6 cd22192
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 5 and 6; TRPV5 and ...
410-614 1.31e-09

Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 5 and 6; TRPV5 and TRPV6 (TRPV5/6) are two homologous members within the vanilloid subfamily of the transient receptor potential (TRP) family. TRPV5 and TRPV6 show only 30-40% homology with other members of the TRP family and have unique properties that differentiates them from other TRP channels. They mediate calcium uptake in epithelia and their expression is dramatically increased in numerous types of cancer. The structure of TRPV5/6 shows the typical topology features of all TRP family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6, which is predicted to form the Ca2+ pore, and large intracellular N- and C-terminal domains. The N-terminal domain of TRPV5/6 contains three ankyrin repeats. This structural element is present in several proteins and plays a role in protein-protein interactions. The N- and C-terminal tails of TRPV5/6 each contain an internal PDZ motif which can function as part of a molecular scaffold via interaction with PDZ-domain containing proteins. A major difference between the properties of TRPV5 and TRPV6 is in their tissue distribution: TRPV5 is predominantly expressed in the distal convoluted tubules (DCT) and connecting tubules (CNT) of the kidney, with limited expression in extrarenal tissues. In contrast, TRPV6 has a broader expression pattern such as expression in the intestine, kidney, placenta, epididymis, exocrine tissues, and a few other tissues.


Pssm-ID: 411976 [Multi-domain]  Cd Length: 609  Bit Score: 63.11  E-value: 1.31e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  410 TPLHIACKKNRIRVMELLLK-HGASIQAVTESGLTPIHVAAFMGHVNIVSQLMHhgASPNTTNV-------RGETALHMA 481
Cdd:cd22192     19 SPLLLAAKENDVQAIKKLLKcPSCDLFQRGALGETALHVAALYDNLEAAVVLME--AAPELVNEpmtsdlyQGETALHIA 96
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  482 ARSGQAEVVRYLVQDGAQVeakakddqtplhISARLGKADIVQqllqqgaSPNAATTSGYTPLHLAAREGHEDVAAFLLD 561
Cdd:cd22192     97 VVNQNLNLVRELIARGADV------------VSPRATGTFFRP-------GPKNLIYYGEHPLSFAACVGNEEIVRLLIE 157
                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907073056  562 HGASLSITTKKGFTPLHV----AAKYGKLEVASLLL-----QKSASPD-AAGKSGLTPLHVAA 614
Cdd:cd22192    158 HGADIRAQDSLGNTVLHIlvlqPNKTFACQMYDLILsydkeDDLQPLDlVPNNQGLTPFKLAA 220
TRPV1-4 cd22193
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 1-4; TRPV1-4 are ...
473-595 1.31e-09

Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 1-4; TRPV1-4 are thermo-sensing channels that function directly in temperature-sensing and nociception; they share substantial structural and functional properties. Transient Receptor Potential (TRP) ion channels activated by temperature (thermo TRPs) are important molecular players in acute, inflammatory, and chronic pain states. So far, 11 TRP channels in mammalian cells have been identified as thermosensitive TRP (thermo-TRP) channels. TRPV1-4 channels are activated by different heat temperatures, for example, TRPV1 and TRPV2 are activated by high temperatures (>43C and >55C, respectively). TRPV1-4 belong to the vanilloid TRP subfamily (TRPV), named after the founding member vanilloid receptor 1 (TRPV1). The structure of TRPV shows the typical topology features of all TRP ion channel family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6 and large intracellular N- and C-terminal domains.


Pssm-ID: 411977 [Multi-domain]  Cd Length: 607  Bit Score: 63.28  E-value: 1.31e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  473 RGETALHMAARSGQAEVVRYLVQDGAQVEAKAKDD--------------QTPLHISARLGKADIVQQLLQ---QGASPNA 535
Cdd:cd22193     75 EGQTALHIAIERRQGDIVALLVENGADVHAHAKGRffqpkyqgegfyfgELPLSLAACTNQPDIVQYLLEnehQPADIEA 154
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907073056  536 ATTSGYTPLH--LAAREGHEDVAAF-------LLDHGASL-------SITTKKGFTPLHVAAKYGKLEVASLLLQK 595
Cdd:cd22193    155 QDSRGNTVLHalVTVADNTKENTKFvtrmydmILIRGAKLcptveleEIRNNDGLTPLQLAAKMGKIEILKYILQR 230
PTZ00322 PTZ00322
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
479-562 2.08e-09

6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional


Pssm-ID: 140343 [Multi-domain]  Cd Length: 664  Bit Score: 62.61  E-value: 2.08e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  479 HMAArSGQAEVVRYLVQDGAQVEAKAKDDQTPLHISARLGKADIVQQLLQQGASPNAATTSGYTPLHLAAREGHEDVAAF 558
Cdd:PTZ00322    88 QLAA-SGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQL 166

                   ....
gi 1907073056  559 LLDH 562
Cdd:PTZ00322   167 LSRH 170
Ank_4 pfam13637
Ankyrin repeats (many copies);
309-362 2.37e-09

Ankyrin repeats (many copies);


Pssm-ID: 372654 [Multi-domain]  Cd Length: 54  Bit Score: 54.59  E-value: 2.37e-09
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1907073056  309 GLTPLHCGARSGHEQVVEMLLDRSAPILSKTKNGLSPLHMATQGDHLNCVQLLL 362
Cdd:pfam13637    1 ELTALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLLL 54
Ank_4 pfam13637
Ankyrin repeats (many copies);
342-395 2.85e-09

Ankyrin repeats (many copies);


Pssm-ID: 372654 [Multi-domain]  Cd Length: 54  Bit Score: 54.59  E-value: 2.85e-09
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1907073056  342 GLSPLHMATQGDHLNCVQLLLQHNVPVDDVTNDYLTALHVAAHCGHYKVAKVLL 395
Cdd:pfam13637    1 ELTALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLLL 54
PTZ00322 PTZ00322
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
512-606 3.27e-09

6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional


Pssm-ID: 140343 [Multi-domain]  Cd Length: 664  Bit Score: 61.84  E-value: 3.27e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  512 HISARlGKADIVQQLLQQGASPNAATTSGYTPLHLAAREGHEDVAAFLLDHGASLSITTKKGFTPLHVAAKYGKLEVASL 591
Cdd:PTZ00322    88 QLAAS-GDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQL 166
                           90
                   ....*....|....*
gi 1907073056  592 LLQKSASPDAAGKSG 606
Cdd:PTZ00322   167 LSRHSQCHFELGANA 181
Ank_5 pfam13857
Ankyrin repeats (many copies);
394-448 3.51e-09

Ankyrin repeats (many copies);


Pssm-ID: 433530 [Multi-domain]  Cd Length: 56  Bit Score: 54.27  E-value: 3.51e-09
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1907073056  394 LLDKK-ASPNAKALNGFTPLHIACKKNRIRVMELLLKHGASIQAVTESGLTPIHVA 448
Cdd:pfam13857    1 LLEHGpIDLNRLDGEGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEGLTALDLA 56
PHA02875 PHA02875
ankyrin repeat protein; Provisional
61-170 4.22e-09

ankyrin repeat protein; Provisional


Pssm-ID: 165206 [Multi-domain]  Cd Length: 413  Bit Score: 60.78  E-value: 4.22e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056   61 IKNGVDVNICNQNGLNALHLASKEGHVEVVSELLQREANVDAATKKGNTALHIASLAGQAEVVKVLVTNGANVNAQSQNG 140
Cdd:PHA02875   122 IARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNG 201
                           90       100       110
                   ....*....|....*....|....*....|.
gi 1907073056  141 -FTPLYMAAQENHLEVVRFLLDNGASQSLAT 170
Cdd:PHA02875   202 cVAALCYAIENNKIDIVRLFIKRGADCNIMF 232
PLN03192 PLN03192
Voltage-dependent potassium channel; Provisional
76-195 5.77e-09

Voltage-dependent potassium channel; Provisional


Pssm-ID: 215625 [Multi-domain]  Cd Length: 823  Bit Score: 61.42  E-value: 5.77e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056   76 NALHLASKeGHVEVVSELLQREANVDAATKKGNTALHIASLAGQAEVVKVLVTNGANVNAQSQNGFTPLY---------- 145
Cdd:PLN03192   528 NLLTVAST-GNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWnaisakhhki 606
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907073056  146 ---------------------MAAQENHLEVVRFLLDNGASQSLATEDGFTPLAVALQQGHDQVVSLLLEN 195
Cdd:PLN03192   607 frilyhfasisdphaagdllcTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMN 677
Death_FADD cd08306
Fas-associated Death Domain protein-protein interaction domain; Death domain (DD) found in ...
1501-1577 7.23e-09

Fas-associated Death Domain protein-protein interaction domain; Death domain (DD) found in FAS-associated via death domain (FADD). FADD is a component of the death-inducing signaling complex (DISC) and serves as an adaptor in the signaling pathway of death receptor proteins. It modulates apoptosis as well as non-apoptotic processes such as cell cycle progression, survival, innate immune signaling, and hematopoiesis. FADD contains an N-terminal DED and a C-terminal DD. Its DD interacts with the DD of the activated death receptor, FAS, and its DED recruits the initiator caspases, caspase-8 and -10, to the DISC complex via a homotypic interaction with the N-terminal DED of the caspase. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and they can recruit other proteins into signaling complexes.


Pssm-ID: 260020  Cd Length: 85  Bit Score: 54.22  E-value: 7.23e-09
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907073056 1501 IVADHLGLSWTELARELNFSVDEINQIRVENPNSLISQSFMLLKKWVTRDGKNATTDALTSVLTKINRIDIVTLLEG 1577
Cdd:cd08306      7 VICENLGRDWRQLARKLGLSETKIESISEAHPRNLREQVRQSLREWKKIKKAEATVADLIKALRDCQLNLVADLVEK 83
Death_RAIDD cd08319
Death domain of RIP-associated ICH-1 homologous protein with a death domain; Death domain (DD) ...
1495-1567 7.25e-09

Death domain of RIP-associated ICH-1 homologous protein with a death domain; Death domain (DD) of RAIDD (RIP-associated ICH-1 homologous protein with a death domain), also known as CRADD (Caspase and RIP adaptor). RAIDD is an adaptor protein that together with the p53-inducible protein PIDD and caspase-2, forms the PIDDosome complex, which is required for caspase-2 activation and plays a role in mediating stress-induced apoptosis. RAIDD contains an N-terminal Caspase Activation and Recruitment Domain (CARD), which interacts with the caspase-2 CARD, and a C-terminal DD, which interacts with the DD of PIDD. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD, DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.


Pssm-ID: 260031  Cd Length: 83  Bit Score: 54.25  E-value: 7.25e-09
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907073056 1495 TDIRMAIVADHLGLSWTELARELNFSVDEINQIRVENPNSLISQSFMLLKKWVTRDGKNATTDALTSVLTKIN 1567
Cdd:cd08319      1 TDRQLNKLAQRLGPEWEQVLLDLGLSKADIYRCKADHPYNVQSQIVEALVKWKQRQGKKATVQSLIQSLKAVE 73
PTZ00322 PTZ00322
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
561-693 9.49e-09

6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional


Pssm-ID: 140343 [Multi-domain]  Cd Length: 664  Bit Score: 60.30  E-value: 9.49e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  561 DHGASLSITTKKGFTPLHVAAKYGKLEVASL------LLQKSASPDAAGksgltplhvaahydnqkvALLLLDQGASPHA 634
Cdd:PTZ00322    49 THLEALEATENKDATPDHNLTTEEVIDPVVAhmltveLCQLAASGDAVG------------------ARILLTGGADPNC 110
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 1907073056  635 AAKNGYTPLHIAAKKNQMDIATSLLEYGADANAVTRQGIASVHLAAQEGHVDMVSLLLS 693
Cdd:PTZ00322   111 RDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLSR 169
PHA02876 PHA02876
ankyrin repeat protein; Provisional
714-802 1.13e-08

ankyrin repeat protein; Provisional


Pssm-ID: 165207 [Multi-domain]  Cd Length: 682  Bit Score: 60.08  E-value: 1.13e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  714 QEDRVNVAEVLVNQGAHVDAQTKMGYTPLHVGCHYGNIKIVNFLLQHSAKVNAKTKNGYTALHQAAQQGHTHIINVLLQN 793
Cdd:PHA02876   154 QQDELLIAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKNIDTIKAIIDN 233
                           90
                   ....*....|.
gi 1907073056  794 --NASPNELTV 802
Cdd:PHA02876   234 rsNINKNDLSL 244
PHA02798 PHA02798
ankyrin-like protein; Provisional
621-811 1.41e-08

ankyrin-like protein; Provisional


Pssm-ID: 222931 [Multi-domain]  Cd Length: 489  Bit Score: 59.46  E-value: 1.41e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  621 VALLLLDQGASPHAAAKNGYTPLHIAAKK---NQMDIATSLLEYGADANAVTRQGIASVHLAAQEGH---VDMVSLLLSR 694
Cdd:PHA02798    91 IVKILIENGADINKKNSDGETPLYCLLSNgyiNNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHhidIEIIKLLLEK 170
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  695 NANVNL-SNKSGLTPLH--LAAQEDR--VNVAEVLVNQG---AHVDAQTKMGYTPLHVGCHYGNIK----IVNFLLQHsA 762
Cdd:PHA02798   171 GVDINThNNKEKYDTLHcyFKYNIDRidADILKLFVDNGfiiNKENKSHKKKFMEYLNSLLYDNKRfkknILDFIFSY-I 249
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*....
gi 1907073056  763 KVNAKTKNGYTALHQAAQQGHTHIINVLLQNNASPNELTVNGNTALAIA 811
Cdd:PHA02798   250 DINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINIITELGNTCLFTA 298
Ank_4 pfam13637
Ankyrin repeats (many copies);
575-626 1.66e-08

Ankyrin repeats (many copies);


Pssm-ID: 372654 [Multi-domain]  Cd Length: 54  Bit Score: 52.28  E-value: 1.66e-08
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|..
gi 1907073056  575 TPLHVAAKYGKLEVASLLLQKSASPDAAGKSGLTPLHVAAHYDNQKVALLLL 626
Cdd:pfam13637    3 TALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLLL 54
PHA03100 PHA03100
ankyrin repeat protein; Provisional
58-135 2.44e-08

ankyrin repeat protein; Provisional


Pssm-ID: 222984 [Multi-domain]  Cd Length: 422  Bit Score: 58.52  E-value: 2.44e-08
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907073056   58 LDY-IKNGVDVNICNQNGLNALHLASKEGHVEVVSELLQREANVDAATKKGNTALHIASLAGQAEVVKVLVTNGANVNA 135
Cdd:PHA03100   175 VNYlLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPSIKT 253
TRPV2 cd22197
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), type 2; TRPV2 is closely ...
473-598 2.57e-08

Transient Receptor Potential channel, Vanilloid subfamily (TRPV), type 2; TRPV2 is closely related to TRPV1, sharing high sequence identity (>50%), but TRPV2 shows a higher temperature threshold and sensitivity for activation than TRPV1. TRPV2 can be stimulated by ligands or lipids, and is involved in osmosensation and mechanosensation. TRPV2 is expressed in both neuronal and non-neuronal tissues, and it has been implicated in diverse physiological and pathophysiological processes, including cardiac-structure maintenance, innate immunity, and cancer. TRPV2 belongs to the vanilloid TRP subfamily (TRPV), named after the founding member vanilloid receptor 1 (TRPV1). The structure of TRPV shows the typical topology features of all Transient Receptor Potential (TRP) ion channel family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6 and large intracellular N- and C-terminal domains.


Pssm-ID: 411981 [Multi-domain]  Cd Length: 640  Bit Score: 59.10  E-value: 2.57e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  473 RGETALHMAARSGQAEVVRYLVQDGAQVEAKAKDD-------------QTPLHISARLGKADIVQQLLQ---QGASPNAA 536
Cdd:cd22197     93 RGHSALHIAIEKRSLQCVKLLVENGADVHARACGRffqkkqgtcfyfgELPLSLAACTKQWDVVNYLLEnphQPASLQAQ 172
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907073056  537 TTSGYTPLH---LAAREGHEDVAAF------LLDHGASL-------SITTKKGFTPLHVAAKYGKLEVASLLLQKSAS 598
Cdd:cd22197    173 DSLGNTVLHalvMIADNSPENSALVikmydgLLQAGARLcptvqleEISNHEGLTPLKLAAKEGKIEIFRHILQREFS 250
PHA02716 PHA02716
CPXV016; CPX019; EVM010; Provisional
105-445 2.67e-08

CPXV016; CPX019; EVM010; Provisional


Pssm-ID: 165089 [Multi-domain]  Cd Length: 764  Bit Score: 59.16  E-value: 2.67e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  105 KKGNTALH--IASLAGQAEVVKVLVTNGANVNAQSQNGFTPL--YMAAQENHLEVVRFLLDNGASQSLATEDGFTPLAVA 180
Cdd:PHA02716   175 KTGYGILHayLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLhtYLITGNVCASVIKKIIELGGDMDMKCVNGMSPIMTY 254
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  181 LQQG---HDQVVSLLLENDTKGKVR-LPA-LHI---AARKDDTKAAALLLQNDTNADVESkmvvnratESGFTPLH--IA 250
Cdd:PHA02716   255 IINIdniNPEITNIYIESLDGNKVKnIPMiLHSyitLARNIDISVVYSFLQPGVKLHYKD--------SAGRTCLHqyIL 326
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  251 AHYGNINVATLLLNRAAAVDFTARNDITPLHVASKRG--------------NANMVKLLLDRGAKIDAKTRDGLTPLH-- 314
Cdd:PHA02716   327 RHNISTDIIKLLHEYGNDLNEPDNIGNTVLHTYLSMLsvvnildpetdndiRLDVIQCLISLGADITAVNCLGYTPLTsy 406
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  315 -CGARS-GHEQVVEMLLdrSAPILSKTKNGLSPlHMATQGDHLNCV--QLLLQHNVPVDDVTNDY----LTALHVAAHCG 386
Cdd:PHA02716   407 iCTAQNyMYYDIIDCLI--SDKVLNMVKHRILQ-DLLIRVDDTPCIihHIIAKYNIPTDLYTDEYepydSTKIHDVYHCA 483
                          330       340       350       360       370       380
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907073056  387 hykvakvlLDKKASPNAKALNGFTPLHIA--CKKNRIRVME---LLLKHGASIQAVTESGLTPI 445
Cdd:PHA02716   484 --------IIERYNNAVCETSGMTPLHVSiiSHTNANIVMDsfvYLLSIQYNINIPTKNGVTPL 539
PHA02798 PHA02798
ankyrin-like protein; Provisional
256-481 3.15e-08

ankyrin-like protein; Provisional


Pssm-ID: 222931 [Multi-domain]  Cd Length: 489  Bit Score: 58.31  E-value: 3.15e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  256 INVATLLLNRAAAVDFTARNDITPL-----HVASKRGNANMVKLLLDRGAKIDAKTRDGLTPLHCGARSGHEQVVEMLL- 329
Cdd:PHA02798    51 TDIVKLFINLGANVNGLDNEYSTPLctilsNIKDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLEILLf 130
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  330 --DRSAPILSKTKNGLSPLHMATQGDH---LNCVQLLLQHNVPVDDVTNDY-LTALHV----AAHCGHYKVAKVLLD--- 396
Cdd:PHA02798   131 miENGADTTLLDKDGFTMLQVYLQSNHhidIEIIKLLLEKGVDINTHNNKEkYDTLHCyfkyNIDRIDADILKLFVDngf 210
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  397 ----KKASPNAKALNGFTPLHIACKKNRIRVMELLLKHgASIQAVTESGLTPIHVAAFMGHVNIVSQLMHHGASPNTTNV 472
Cdd:PHA02798   211 iinkENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSY-IDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINIITE 289

                   ....*....
gi 1907073056  473 RGETALHMA 481
Cdd:PHA02798   290 LGNTCLFTA 298
PLN03192 PLN03192
Voltage-dependent potassium channel; Provisional
611-826 3.54e-08

Voltage-dependent potassium channel; Provisional


Pssm-ID: 215625 [Multi-domain]  Cd Length: 823  Bit Score: 58.73  E-value: 3.54e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  611 HVAAHydNQKVALLLLDQGASpHAAAKNGYTPLHIAAKKNQmDIATSLLEYGADANAVTRQGIASVHLAAQEGHVDMVSL 690
Cdd:PLN03192   501 HKELH--DLNVGDLLGDNGGE-HDDPNMASNLLTVASTGNA-ALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLV 576
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  691 LLSRNANVNLSNKSGLTPLHLAAQEDRVNVAEVLVNQGAHVDAQTkmGYTPLHVGCHYGNIKIVNFLLQHSAKVNAKTKN 770
Cdd:PLN03192   577 LLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHFASISDPHA--AGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQ 654
                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907073056  771 GYTALHQAAQQGHTHIINVLLQNNAS------PNELTVNGNTALAIARRLGY-ISVVDTLKVV 826
Cdd:PLN03192   655 GATALQVAMAEDHVDMVRLLIMNGADvdkantDDDFSPTELRELLQKRELGHsITIVDSVPAD 717
PHA02946 PHA02946
ankyin-like protein; Provisional
383-582 4.43e-08

ankyin-like protein; Provisional


Pssm-ID: 165256 [Multi-domain]  Cd Length: 446  Bit Score: 57.76  E-value: 4.43e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  383 AHCG----HYKVAKVLLDKKASPNAKALNGFTPLHIACKKNRIRVMELLLKHGASIQAVTESGLTPIHVAAFMGH--VNI 456
Cdd:PHA02946    43 AYCGikglDERFVEELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDevIER 122
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  457 VSQLMHHGASPNTTNVRGETALHMAARSGQAEVVRYLVQDG--AQVEAKAKDDQTPLHISARLGKADIVQQLLQQGASPN 534
Cdd:PHA02946   123 INLLVQYGAKINNSVDEEGCGPLLACTDPSERVFKKIMSIGfeARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPS 202
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*....
gi 1907073056  535 AATTSGYTPLHLAAREGHEDVAAF-LLDHGASLSITTKKGFTPLHVAAK 582
Cdd:PHA02946   203 KPDHDGNTPLHIVCSKTVKNVDIInLLLPSTDVNKQNKFGDSPLTLLIK 251
trp TIGR00870
transient-receptor-potential calcium channel protein; The Transient Receptor Potential Ca2+ ...
135-450 4.80e-08

transient-receptor-potential calcium channel protein; The Transient Receptor Potential Ca2+ Channel (TRP-CC) Family (TC. 1.A.4)The TRP-CC family has also been called the store-operated calcium channel (SOC) family. The prototypical members include the Drosophila retinal proteinsTRP and TRPL (Montell and Rubin, 1989; Hardie and Minke, 1993). SOC members of the family mediate the entry of extracellular Ca2+ into cells in responseto depletion of intracellular Ca2+ stores (Clapham, 1996) and agonist stimulated production of inositol-1,4,5 trisphosphate (IP3). One member of the TRP-CCfamily, mammalian Htrp3, has been shown to form a tight complex with the IP3 receptor (TC #1.A.3.2.1). This interaction is apparently required for IP3 tostimulate Ca2+ release via Htrp3. The vanilloid receptor subtype 1 (VR1), which is the receptor for capsaicin (the ?hot? ingredient in chili peppers) and servesas a heat-activated ion channel in the pain pathway (Caterina et al., 1997), is also a member of this family. The stretch-inhibitable non-selective cation channel(SIC) is identical to the vanilloid receptor throughout all of its first 700 residues, but it exhibits a different sequence in its last 100 residues. VR1 and SICtransport monovalent cations as well as Ca2+. VR1 is about 10x more permeable to Ca2+ than to monovalent ions. Ca2+ overload probably causes cell deathafter chronic exposure to capsaicin. (McCleskey and Gold, 1999). [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273311 [Multi-domain]  Cd Length: 743  Bit Score: 58.17  E-value: 4.80e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  135 AQSQNGFTPlymAAQENHLEVVRFLLDNGASQSLATED--GFTPLAVALQQG-HDQVVSLLLENDTKGKVRLPALHIAAR 211
Cdd:TIGR00870   15 SDEEKAFLP---AAERGDLASVYRDLEEPKKLNINCPDrlGRSALFVAAIENeNLELTELLLNLSCRGAVGDTLLHAISL 91
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  212 --KDDTKAAALLLQNDTNADVESKMVVNRATeSGFTPlhiaahygninvatlllnraaavdftarnDITPLHVASKRGNA 289
Cdd:TIGR00870   92 eyVDAVEAILLHLLAAFRKSGPLELANDQYT-SEFTP-----------------------------GITALHLAAHRQNY 141
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  290 NMVKLLLDRGAKIDAKT--------------RDGLTPLHCGARSGHEQVVEMLLDRSAPILSKTKNGLSPLHMAtqgdhl 355
Cdd:TIGR00870  142 EIVKLLLERGASVPARAcgdffvksqgvdsfYHGESPLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLL------ 215
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  356 ncvqlllqhnVPVDDVTNDYLTalhVAAHCghYKVAKVLLDKKASPNAKAL----NGFTPLHIACKKNRIRVMELLLKHG 431
Cdd:TIGR00870  216 ----------VMENEFKAEYEE---LSCQM--YNFALSLLDKLRDSKELEVilnhQGLTPLKLAAKEGRIVLFRLKLAIK 280
                          330
                   ....*....|....*....
gi 1907073056  432 ASIQAVTESGLTPIHVAAF 450
Cdd:TIGR00870  281 YKQKKFVAWPNGQQLLSLY 299
TRPV cd21882
Transient Receptor Potential channel, Vanilloid subfamily (TRPV); The vanilloid TRP subfamily ...
106-265 5.01e-08

Transient Receptor Potential channel, Vanilloid subfamily (TRPV); The vanilloid TRP subfamily (TRPV), named after the vanilloid receptor 1 (TRPV1), consists of six members: four thermo-sensing channels (TRPV1, TRPV2, TRPV3, and TRPV4) and two Ca2+ selective channels (TRPV5 and TRPV6). The calcium-selective channels TRPV5 and TRPV6 can be heterotetramers and are important for general Ca2+ homeostasis. All four channels within the TRPV1-4 group show temperature-invoked currents when expressed in heterologous cell systems, ranging from activation at ~25C for TRPV4 to ~52C for TRPV2. The structure of TRPV shows the typical topology features of all Transient Receptor Potential (TRP) ion channel family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6 and large intracellular N- and C-terminal domains. The TRP family consists of membrane proteins that function as ion channels that communicate between the cell and its environment, by a vast array of physical or chemical stimuli, including radiation (in the form of temperature, infrared ,or light) and pressure (osmotic or mechanical). TRP channels are formed by a tetrameric complex of channel subunits. Based on sequence identity, the mammalian TRP channel family is classified into six subfamilies, with significant sequence similarity within the transmembrane domains, but very low similarity in their N- and C-terminal cytoplasmic regions. The six subfamilies are named based on their first member: TRPC (canonical), TRPV (vanilloid), TRPM (melastatin), TRPA (ankyrin), TRPML (mucolipin), and TRPP (polycystic).


Pssm-ID: 411975 [Multi-domain]  Cd Length: 600  Bit Score: 57.97  E-value: 5.01e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  106 KGNTALHIASLAGQAEVVKVLVTNGANVNAQS---------QNGF----TPLYMAAQENHLEVVRFLLDNGASqslated 172
Cdd:cd21882     72 QGQTALHIAIENRNLNLVRLLVENGADVSARAtgrffrkspGNLFyfgeLPLSLAACTNQEEIVRLLLENGAQ------- 144
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  173 gftPLAVALQqghdqvvslllenDTKGKVRLPALHIAARK--DDTKAAA----LLLQNDTNAD--VESKMVVNRateSGF 244
Cdd:cd21882    145 ---PAALEAQ-------------DSLGNTVLHALVLQADNtpENSAFVCqmynLLLSYGAHLDptQQLEEIPNH---QGL 205
                          170       180
                   ....*....|....*....|.
gi 1907073056  245 TPLHIAAHYGNINVATLLLNR 265
Cdd:cd21882    206 TPLKLAAVEGKIVMFQHILQR 226
Ank_4 pfam13637
Ankyrin repeats (many copies);
676-725 5.77e-08

Ankyrin repeats (many copies);


Pssm-ID: 372654 [Multi-domain]  Cd Length: 54  Bit Score: 50.74  E-value: 5.77e-08
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|
gi 1907073056  676 VHLAAQEGHVDMVSLLLSRNANVNLSNKSGLTPLHLAAQEDRVNVAEVLV 725
Cdd:pfam13637    5 LHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLLL 54
PTZ00322 PTZ00322
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
364-463 5.98e-08

6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional


Pssm-ID: 140343 [Multi-domain]  Cd Length: 664  Bit Score: 57.99  E-value: 5.98e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  364 HNVPVDDVTNDYLTAL------HVAAHcGHYKVAKVLLDKKASPNAKALNGFTPLHIACKKNRIRVMELLLKHGASIQAV 437
Cdd:PTZ00322    66 HNLTTEEVIDPVVAHMltvelcQLAAS-GDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLL 144
                           90       100
                   ....*....|....*....|....*.
gi 1907073056  438 TESGLTPIHVAAFMGHVNIVSQLMHH 463
Cdd:PTZ00322   145 DKDGKTPLELAEENGFREVVQLLSRH 170
Ank_5 pfam13857
Ankyrin repeats (many copies);
261-314 6.31e-08

Ankyrin repeats (many copies);


Pssm-ID: 433530 [Multi-domain]  Cd Length: 56  Bit Score: 50.81  E-value: 6.31e-08
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1907073056  261 LLLNRAAAVDFTARNDITPLHVASKRGNANMVKLLLDRGAKIDAKTRDGLTPLH 314
Cdd:pfam13857    1 LLEHGPIDLNRLDGEGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEGLTALD 54
Ank_4 pfam13637
Ankyrin repeats (many copies);
705-758 7.59e-08

Ankyrin repeats (many copies);


Pssm-ID: 372654 [Multi-domain]  Cd Length: 54  Bit Score: 50.35  E-value: 7.59e-08
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1907073056  705 GLTPLHLAAQEDRVNVAEVLVNQGAHVDAQTKMGYTPLHVGCHYGNIKIVNFLL 758
Cdd:pfam13637    1 ELTALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLLL 54
trp TIGR00870
transient-receptor-potential calcium channel protein; The Transient Receptor Potential Ca2+ ...
540-725 9.00e-08

transient-receptor-potential calcium channel protein; The Transient Receptor Potential Ca2+ Channel (TRP-CC) Family (TC. 1.A.4)The TRP-CC family has also been called the store-operated calcium channel (SOC) family. The prototypical members include the Drosophila retinal proteinsTRP and TRPL (Montell and Rubin, 1989; Hardie and Minke, 1993). SOC members of the family mediate the entry of extracellular Ca2+ into cells in responseto depletion of intracellular Ca2+ stores (Clapham, 1996) and agonist stimulated production of inositol-1,4,5 trisphosphate (IP3). One member of the TRP-CCfamily, mammalian Htrp3, has been shown to form a tight complex with the IP3 receptor (TC #1.A.3.2.1). This interaction is apparently required for IP3 tostimulate Ca2+ release via Htrp3. The vanilloid receptor subtype 1 (VR1), which is the receptor for capsaicin (the ?hot? ingredient in chili peppers) and servesas a heat-activated ion channel in the pain pathway (Caterina et al., 1997), is also a member of this family. The stretch-inhibitable non-selective cation channel(SIC) is identical to the vanilloid receptor throughout all of its first 700 residues, but it exhibits a different sequence in its last 100 residues. VR1 and SICtransport monovalent cations as well as Ca2+. VR1 is about 10x more permeable to Ca2+ than to monovalent ions. Ca2+ overload probably causes cell deathafter chronic exposure to capsaicin. (McCleskey and Gold, 1999). [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273311 [Multi-domain]  Cd Length: 743  Bit Score: 57.40  E-value: 9.00e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  540 GYTPLHLAAREG-HEDVAAFLLDHGASLSIttkkGFTPLHVAAK--YGKLEVASLLLQKSAS--------PDAAGKS--- 605
Cdd:TIGR00870   52 GRSALFVAAIENeNLELTELLLNLSCRGAV----GDTLLHAISLeyVDAVEAILLHLLAAFRksgplelaNDQYTSEftp 127
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  606 GLTPLHVAAHYDNQKVALLLLDQGASPHAAAK--------------NGYTPLHIAAKKNQMDIATSLLEYGADANAVTRQ 671
Cdd:TIGR00870  128 GITALHLAAHRQNYEIVKLLLERGASVPARACgdffvksqgvdsfyHGESPLNAAACLGSPSIVALLSEDPADILTADSL 207
                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  672 GIASVHLAAQEGHVD---------MVSLLLSRNANVNLS-------NKSGLTPLHLAAQEDRVNVAEVLV 725
Cdd:TIGR00870  208 GNTLLHLLVMENEFKaeyeelscqMYNFALSLLDKLRDSkelevilNHQGLTPLKLAAKEGRIVLFRLKL 277
PHA02989 PHA02989
ankyrin repeat protein; Provisional
256-528 9.53e-08

ankyrin repeat protein; Provisional


Pssm-ID: 222954 [Multi-domain]  Cd Length: 494  Bit Score: 57.06  E-value: 9.53e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  256 INVATLLLNRAAAVDFTAR-NDITPLHVASKRGNANMVKLLLDRGAKIDAKtrdGL--TPLHCGAR------SGHEQVVE 326
Cdd:PHA02989    16 KNALEFLLRTGFDVNEEYRgNSILLLYLKRKDVKIKIVKLLIDNGADVNYK---GYieTPLCAVLRnreitsNKIKKIVK 92
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  327 MLLDRSAPILSKTKNGLSPLHMATQGDHLNCV---QLLLQHNVPVDDVTND--------YLTALHVAAHcghykVAKVLL 395
Cdd:PHA02989    93 LLLKFGADINLKTFNGVSPIVCFIYNSNINNCdmlRFLLSKGINVNDVKNSrgynllhmYLESFSVKKD-----VIKILL 167
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  396 DKKASPNAKA-LNGFTPLHIACKKN----RIRVMELLLKHGASI-------QAVTESGLTPiHVAAFMGHVNIVSQLMHH 463
Cdd:PHA02989   168 SFGVNLFEKTsLYGLTPMNIYLRNDidviSIKVIKYLIKKGVNIetnnngsESVLESFLDN-NKILSKKEFKVLNFILKY 246
                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1907073056  464 gASPNTTNVRGETALHMAARSGQAEVVRYLVQDGAQVEAKAKDDQTPLHISARLGKADIVQQLLQ 528
Cdd:PHA02989   247 -IKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRILQ 310
Ank_4 pfam13637
Ankyrin repeats (many copies);
142-193 9.60e-08

Ankyrin repeats (many copies);


Pssm-ID: 372654 [Multi-domain]  Cd Length: 54  Bit Score: 50.35  E-value: 9.60e-08
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|..
gi 1907073056  142 TPLYMAAQENHLEVVRFLLDNGASQSLATEDGFTPLAVALQQGHDQVVSLLL 193
Cdd:pfam13637    3 TALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLLL 54
PLN03192 PLN03192
Voltage-dependent potassium channel; Provisional
48-144 1.32e-07

Voltage-dependent potassium channel; Provisional


Pssm-ID: 215625 [Multi-domain]  Cd Length: 823  Bit Score: 56.80  E-value: 1.32e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056   48 AARAGHLEKALDYIKNGVDVNICNQNGLNAL-------H------------------------LASKEGHVEVVSELLQR 96
Cdd:PLN03192   565 AASKGYEDCVLVLLKHACNVHIRDANGNTALwnaisakHhkifrilyhfasisdphaagdllcTAAKRNDLTAMKELLKQ 644
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*....
gi 1907073056   97 EANVDAATKKGNTALHIASLAGQAEVVKVLVTNGANVN-AQSQNGFTPL 144
Cdd:PLN03192   645 GLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDkANTDDDFSPT 693
PTZ00322 PTZ00322
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
460-527 1.35e-07

6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional


Pssm-ID: 140343 [Multi-domain]  Cd Length: 664  Bit Score: 56.83  E-value: 1.35e-07
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907073056  460 LMHHGASPNTTNVRGETALHMAARSGQAEVVRYLVQDGAQVEAKAKDDQTPLHISARLGKADIVQQLL 527
Cdd:PTZ00322   101 LLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLS 168
TRPV1-4 cd22193
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 1-4; TRPV1-4 are ...
106-265 1.39e-07

Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 1-4; TRPV1-4 are thermo-sensing channels that function directly in temperature-sensing and nociception; they share substantial structural and functional properties. Transient Receptor Potential (TRP) ion channels activated by temperature (thermo TRPs) are important molecular players in acute, inflammatory, and chronic pain states. So far, 11 TRP channels in mammalian cells have been identified as thermosensitive TRP (thermo-TRP) channels. TRPV1-4 channels are activated by different heat temperatures, for example, TRPV1 and TRPV2 are activated by high temperatures (>43C and >55C, respectively). TRPV1-4 belong to the vanilloid TRP subfamily (TRPV), named after the founding member vanilloid receptor 1 (TRPV1). The structure of TRPV shows the typical topology features of all TRP ion channel family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6 and large intracellular N- and C-terminal domains.


Pssm-ID: 411977 [Multi-domain]  Cd Length: 607  Bit Score: 56.73  E-value: 1.39e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  106 KGNTALHIASLAGQAEVVKVLVTNGANVNAQSQNGF--------------TPLYMAAQENHLEVVRFLLDNgaSQSLATe 171
Cdd:cd22193     75 EGQTALHIAIERRQGDIVALLVENGADVHAHAKGRFfqpkyqgegfyfgeLPLSLAACTNQPDIVQYLLEN--EHQPAD- 151
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  172 dgftplavalqqghdqvvslLLENDTKGKVRLPALHIAArkDDTKAAA--------LLLQNDTN--ADVESKMVVNRate 241
Cdd:cd22193    152 --------------------IEAQDSRGNTVLHALVTVA--DNTKENTkfvtrmydMILIRGAKlcPTVELEEIRNN--- 206
                          170       180
                   ....*....|....*....|....
gi 1907073056  242 SGFTPLHIAAHYGNINVATLLLNR 265
Cdd:cd22193    207 DGLTPLQLAAKMGKIEILKYILQR 230
Ank_4 pfam13637
Ankyrin repeats (many copies);
509-560 1.41e-07

Ankyrin repeats (many copies);


Pssm-ID: 372654 [Multi-domain]  Cd Length: 54  Bit Score: 49.58  E-value: 1.41e-07
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|..
gi 1907073056  509 TPLHISARLGKADIVQQLLQQGASPNAATTSGYTPLHLAAREGHEDVAAFLL 560
Cdd:pfam13637    3 TALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLLL 54
PHA02989 PHA02989
ankyrin repeat protein; Provisional
619-821 1.71e-07

ankyrin repeat protein; Provisional


Pssm-ID: 222954 [Multi-domain]  Cd Length: 494  Bit Score: 55.90  E-value: 1.71e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  619 QKVALLLLDQGASPHAAAKNGYTPL-------HIaakkNQMDIATSLLEYGADANAV-TRQGIASVHLAAQEGHV--DMV 688
Cdd:PHA02989    88 KKIVKLLLKFGADINLKTFNGVSPIvcfiynsNI----NNCDMLRFLLSKGINVNDVkNSRGYNLLHMYLESFSVkkDVI 163
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  689 SLLLsrNANVNLSNKS---GLTPLHLAAQED----RVNVAEVLVNQGAHVDAQTKMGYTPL------HVGCHYGNIKIVN 755
Cdd:PHA02989   164 KILL--SFGVNLFEKTslyGLTPMNIYLRNDidviSIKVIKYLIKKGVNIETNNNGSESVLesfldnNKILSKKEFKVLN 241
                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907073056  756 FLLQHsAKVNAKTKNGYTALHQAAQQGHTHIINVLLQNNASPNELTVNGNTALAIARRLGYISVVD 821
Cdd:PHA02989   242 FILKY-IKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLN 306
Ank_4 pfam13637
Ankyrin repeats (many copies);
606-659 1.75e-07

Ankyrin repeats (many copies);


Pssm-ID: 372654 [Multi-domain]  Cd Length: 54  Bit Score: 49.58  E-value: 1.75e-07
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1907073056  606 GLTPLHVAAHYDNQKVALLLLDQGASPHAAAKNGYTPLHIAAKKNQMDIATSLL 659
Cdd:pfam13637    1 ELTALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLLL 54
TRPV5-6 cd22192
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 5 and 6; TRPV5 and ...
74-184 2.32e-07

Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 5 and 6; TRPV5 and TRPV6 (TRPV5/6) are two homologous members within the vanilloid subfamily of the transient receptor potential (TRP) family. TRPV5 and TRPV6 show only 30-40% homology with other members of the TRP family and have unique properties that differentiates them from other TRP channels. They mediate calcium uptake in epithelia and their expression is dramatically increased in numerous types of cancer. The structure of TRPV5/6 shows the typical topology features of all TRP family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6, which is predicted to form the Ca2+ pore, and large intracellular N- and C-terminal domains. The N-terminal domain of TRPV5/6 contains three ankyrin repeats. This structural element is present in several proteins and plays a role in protein-protein interactions. The N- and C-terminal tails of TRPV5/6 each contain an internal PDZ motif which can function as part of a molecular scaffold via interaction with PDZ-domain containing proteins. A major difference between the properties of TRPV5 and TRPV6 is in their tissue distribution: TRPV5 is predominantly expressed in the distal convoluted tubules (DCT) and connecting tubules (CNT) of the kidney, with limited expression in extrarenal tissues. In contrast, TRPV6 has a broader expression pattern such as expression in the intestine, kidney, placenta, epididymis, exocrine tissues, and a few other tissues.


Pssm-ID: 411976 [Multi-domain]  Cd Length: 609  Bit Score: 55.79  E-value: 2.32e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056   74 GLNALHLASKEGHVEVVSELLQREANVDA--AT----KKGNTAL-----HIASLA---GQAEVVKVLVTNGANVNAQSQN 139
Cdd:cd22192     89 GETALHIAVVNQNLNLVRELIARGADVVSprATgtffRPGPKNLiyygeHPLSFAacvGNEEIVRLLIEHGADIRAQDSL 168
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 1907073056  140 GFTPLYM-AAQENHL---EVVRFLLD---NGASQSLAT---EDGFTPLAVALQQG 184
Cdd:cd22192    169 GNTVLHIlVLQPNKTfacQMYDLILSydkEDDLQPLDLvpnNQGLTPFKLAAKEG 223
TRPV1 cd22196
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), type 1; Vanilloid receptor 1 ...
106-265 2.44e-07

Transient Receptor Potential channel, Vanilloid subfamily (TRPV), type 1; Vanilloid receptor 1 (TRPV1), a capsaicin (vanilloid) receptor, is the founding member of the vanilloid TRP subfamily (TRPV). In humans, it is expressed in the brain, kidney, pancreas, testis, uterus, spleen, stomach, small intestine, lung and liver. TRPV1 has been implicated to have function in thermo-sensation (heat), autonomic thermoregulation, nociception, food intake regulation, and multiple functions in the gastrointestinal (GI) tract. The receptor has also been involved in growth cone guidance, long-term depression, endocannabinoid signaling and osmosensing in the central nervous system. TRPV1 is up regulated in several human pathological conditions including vulvodynia, GI inflammation, Crohn's disease and ulcerative colitis. TRPV1 knock-out mice exhibit impaired sensation to thermal-mechanical acute pain. The structure of TRPV shows the typical topology features of all Transient Receptor Potential (TRP) ion channel family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6 and large intracellular N- and C-terminal domains.


Pssm-ID: 411980 [Multi-domain]  Cd Length: 649  Bit Score: 55.97  E-value: 2.44e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  106 KGNTALHIASLAGQAEVVKVLVTNGANVNA----------QSQNGF----TPLYMAAQENHLEVVRFLLDNgasqslate 171
Cdd:cd22196     93 KGQTALHIAIERRNMHLVELLVQNGADVHArasgeffkkkKGGPGFyfgeLPLSLAACTNQLDIVKFLLEN--------- 163
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  172 dGFTPLAVALQqghdqvvslllenDTKGKVRLPALHIAA--RKDDTKAAA------LLLQNDTNADVESKMVVNRateSG 243
Cdd:cd22196    164 -PHSPADISAR-------------DSMGNTVLHALVEVAdnTPENTKFVTkmyneiLILGAKIRPLLKLEEITNK---KG 226
                          170       180
                   ....*....|....*....|..
gi 1907073056  244 FTPLHIAAHYGNINVATLLLNR 265
Cdd:cd22196    227 LTPLKLAAKTGKIGIFAYILGR 248
Ank_4 pfam13637
Ankyrin repeats (many copies);
245-296 2.71e-07

Ankyrin repeats (many copies);


Pssm-ID: 372654 [Multi-domain]  Cd Length: 54  Bit Score: 48.81  E-value: 2.71e-07
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|..
gi 1907073056  245 TPLHIAAHYGNINVATLLLNRAAAVDFTARNDITPLHVASKRGNANMVKLLL 296
Cdd:pfam13637    3 TALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLLL 54
PTZ00322 PTZ00322
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
426-508 2.79e-07

6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional


Pssm-ID: 140343 [Multi-domain]  Cd Length: 664  Bit Score: 55.67  E-value: 2.79e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  426 LLLKHGASIQAVTESGLTPIHVAAFMGHVNIVSQLMHHGASPNTTNVRGETALHMAARSGQAEVVRYLV---QDGAQVEA 502
Cdd:PTZ00322   100 ILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLSrhsQCHFELGA 179

                   ....*.
gi 1907073056  503 KAKDDQ 508
Cdd:PTZ00322   180 NAKPDS 185
TRPV5-6 cd22192
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 5 and 6; TRPV5 and ...
278-495 3.29e-07

Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 5 and 6; TRPV5 and TRPV6 (TRPV5/6) are two homologous members within the vanilloid subfamily of the transient receptor potential (TRP) family. TRPV5 and TRPV6 show only 30-40% homology with other members of the TRP family and have unique properties that differentiates them from other TRP channels. They mediate calcium uptake in epithelia and their expression is dramatically increased in numerous types of cancer. The structure of TRPV5/6 shows the typical topology features of all TRP family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6, which is predicted to form the Ca2+ pore, and large intracellular N- and C-terminal domains. The N-terminal domain of TRPV5/6 contains three ankyrin repeats. This structural element is present in several proteins and plays a role in protein-protein interactions. The N- and C-terminal tails of TRPV5/6 each contain an internal PDZ motif which can function as part of a molecular scaffold via interaction with PDZ-domain containing proteins. A major difference between the properties of TRPV5 and TRPV6 is in their tissue distribution: TRPV5 is predominantly expressed in the distal convoluted tubules (DCT) and connecting tubules (CNT) of the kidney, with limited expression in extrarenal tissues. In contrast, TRPV6 has a broader expression pattern such as expression in the intestine, kidney, placenta, epididymis, exocrine tissues, and a few other tissues.


Pssm-ID: 411976 [Multi-domain]  Cd Length: 609  Bit Score: 55.40  E-value: 3.29e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  278 TPLHVASKRGNANMVKLLLdRGAKIDAKTRDGL--TPLHCGARSGHEQVVEMLLDRSA-----PILSKTKNGLSPLHMAT 350
Cdd:cd22192     19 SPLLLAAKENDVQAIKKLL-KCPSCDLFQRGALgeTALHVAALYDNLEAAVVLMEAAPelvnePMTSDLYQGETALHIAV 97
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  351 QGDHLNCVQLLLQHNVpvdDVTNdyltalhvAAHCGHYkvakvlldkkASPNAKALNGFTPlHI----ACKKNRIRVmEL 426
Cdd:cd22192     98 VNQNLNLVRELIARGA---DVVS--------PRATGTF----------FRPGPKNLIYYGE-HPlsfaACVGNEEIV-RL 154
                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907073056  427 LLKHGASIQAVTESGLTPIHVAAFMGHVNIVSQLMH---------HGASPNT-TNVRGETALHMAARSGQAEVVRYLVQ 495
Cdd:cd22192    155 LIEHGADIRAQDSLGNTVLHILVLQPNKTFACQMYDlilsydkedDLQPLDLvPNNQGLTPFKLAAKEGNIVMFQHLVQ 233
Ank_5 pfam13857
Ankyrin repeats (many copies);
559-613 3.37e-07

Ankyrin repeats (many copies);


Pssm-ID: 433530 [Multi-domain]  Cd Length: 56  Bit Score: 48.88  E-value: 3.37e-07
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1907073056  559 LLDHG-ASLSITTKKGFTPLHVAAKYGKLEVASLLLQKSASPDAAGKSGLTPLHVA 613
Cdd:pfam13857    1 LLEHGpIDLNRLDGEGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEGLTALDLA 56
PLN03192 PLN03192
Voltage-dependent potassium channel; Provisional
196-348 3.62e-07

Voltage-dependent potassium channel; Provisional


Pssm-ID: 215625 [Multi-domain]  Cd Length: 823  Bit Score: 55.26  E-value: 3.62e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  196 DTKGKVrlpALHIAARKDDTKAAALLLQNDTNADVESKmvvnrateSGFTPLHIAAHYGNINVATLLLNRAAAVDFTARN 275
Cdd:PLN03192   555 DSKGRT---PLHIAASKGYEDCVLVLLKHACNVHIRDA--------NGNTALWNAISAKHHKIFRILYHFASISDPHAAG 623
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907073056  276 DItpLHVASKRGNANMVKLLLDRGAKIDAKTRDGLTPLHCGARSGHEQVVEMLLDRSAPIL-SKTKNGLSPLHM 348
Cdd:PLN03192   624 DL--LCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDkANTDDDFSPTEL 695
TRPV2 cd22197
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), type 2; TRPV2 is closely ...
106-265 3.73e-07

Transient Receptor Potential channel, Vanilloid subfamily (TRPV), type 2; TRPV2 is closely related to TRPV1, sharing high sequence identity (>50%), but TRPV2 shows a higher temperature threshold and sensitivity for activation than TRPV1. TRPV2 can be stimulated by ligands or lipids, and is involved in osmosensation and mechanosensation. TRPV2 is expressed in both neuronal and non-neuronal tissues, and it has been implicated in diverse physiological and pathophysiological processes, including cardiac-structure maintenance, innate immunity, and cancer. TRPV2 belongs to the vanilloid TRP subfamily (TRPV), named after the founding member vanilloid receptor 1 (TRPV1). The structure of TRPV shows the typical topology features of all Transient Receptor Potential (TRP) ion channel family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6 and large intracellular N- and C-terminal domains.


Pssm-ID: 411981 [Multi-domain]  Cd Length: 640  Bit Score: 55.25  E-value: 3.73e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  106 KGNTALHIASLAGQAEVVKVLVTNGANVNAQSQNGF-------------TPLYMAAQENHLEVVRFLLDNGASQSlated 172
Cdd:cd22197     93 RGHSALHIAIEKRSLQCVKLLVENGADVHARACGRFfqkkqgtcfyfgeLPLSLAACTKQWDVVNYLLENPHQPA----- 167
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  173 gftplavALQqghdqvvslllENDTKGKVRLPALHIAArkDDTKA-AAL-------LLQNDTNADVESKM--VVNRAtes 242
Cdd:cd22197    168 -------SLQ-----------AQDSLGNTVLHALVMIA--DNSPEnSALvikmydgLLQAGARLCPTVQLeeISNHE--- 224
                          170       180
                   ....*....|....*....|...
gi 1907073056  243 GFTPLHIAAHYGNINVATLLLNR 265
Cdd:cd22197    225 GLTPLKLAAKEGKIEIFRHILQR 247
PHA02989 PHA02989
ankyrin repeat protein; Provisional
356-704 4.04e-07

ankyrin repeat protein; Provisional


Pssm-ID: 222954 [Multi-domain]  Cd Length: 494  Bit Score: 54.75  E-value: 4.04e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  356 NCVQLLLQHNVPVDDV-TNDYLTALHVAAHCGHYKVAKVLLDKKASPNAKALNGfTPL-------HIACKKNRiRVMELL 427
Cdd:PHA02989    17 NALEFLLRTGFDVNEEyRGNSILLLYLKRKDVKIKIVKLLIDNGADVNYKGYIE-TPLcavlrnrEITSNKIK-KIVKLL 94
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  428 LKHGASIQAVTESGLTPIHVAAFMGHVN---IVSQLMHHGASPNTT-NVRGETALHMAAR--SGQAEVVRYLVQDGAQV- 500
Cdd:PHA02989    95 LKFGADINLKTFNGVSPIVCFIYNSNINncdMLRFLLSKGINVNDVkNSRGYNLLHMYLEsfSVKKDVIKILLSFGVNLf 174
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  501 EAKAKDDQTPLHISAR----LGKADIVQQLLQQGASPNAATtsgytplhlaarEGHEDVAAFLLDHGASLSittKKGFTP 576
Cdd:PHA02989   175 EKTSLYGLTPMNIYLRndidVISIKVIKYLIKKGVNIETNN------------NGSESVLESFLDNNKILS---KKEFKV 239
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  577 LHVAAKYGKLevaslllqksaspdaagksgltplhvaahydnqkvalllldqgaspHAAAKNGYTPLHIAAKKNQMDIAT 656
Cdd:PHA02989   240 LNFILKYIKI----------------------------------------------NKKDKKGFNPLLISAKVDNYEAFN 273
                          330       340       350       360
                   ....*....|....*....|....*....|....*....|....*...
gi 1907073056  657 SLLEYGADANAVTRQGIASVHLAAQEGHVDMVSLLLSRNANVNLSNKS 704
Cdd:PHA02989   274 YLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRILQLKPGKYLIKKT 321
PTZ00322 PTZ00322
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
658-724 4.27e-07

6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional


Pssm-ID: 140343 [Multi-domain]  Cd Length: 664  Bit Score: 54.90  E-value: 4.27e-07
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907073056  658 LLEYGADANAVTRQGIASVHLAAQEGHVDMVSLLLSRNANVNLSNKSGLTPLHLAAQEDRVNVAEVL 724
Cdd:PTZ00322   101 LLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLL 167
Ank_4 pfam13637
Ankyrin repeats (many copies);
202-263 5.23e-07

Ankyrin repeats (many copies);


Pssm-ID: 372654 [Multi-domain]  Cd Length: 54  Bit Score: 48.04  E-value: 5.23e-07
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907073056  202 RLPALHIAARKDDTKAAALLLQNDTNadveskmvVNRATESGFTPLHIAAHYGNINVATLLL 263
Cdd:pfam13637    1 ELTALHAAAASGHLELLRLLLEKGAD--------INAVDGNGETALHFAASNGNVEVLKLLL 54
PTZ00322 PTZ00322
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
284-364 5.61e-07

6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional


Pssm-ID: 140343 [Multi-domain]  Cd Length: 664  Bit Score: 54.52  E-value: 5.61e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  284 SKRGNANMVKLLLDRGAKIDAKTRDGLTPLHCGARSGHEQVVEMLLDRSAPILSKTKNGLSPLHMATQGDHLNCVQLLLQ 363
Cdd:PTZ00322    90 AASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLSR 169

                   .
gi 1907073056  364 H 364
Cdd:PTZ00322   170 H 170
Ank_4 pfam13637
Ankyrin repeats (many copies);
47-94 5.83e-07

Ankyrin repeats (many copies);


Pssm-ID: 372654 [Multi-domain]  Cd Length: 54  Bit Score: 48.04  E-value: 5.83e-07
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*...
gi 1907073056   47 RAARAGHLEKALDYIKNGVDVNICNQNGLNALHLASKEGHVEVVSELL 94
Cdd:pfam13637    7 AAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLLL 54
trp TIGR00870
transient-receptor-potential calcium channel protein; The Transient Receptor Potential Ca2+ ...
54-265 5.88e-07

transient-receptor-potential calcium channel protein; The Transient Receptor Potential Ca2+ Channel (TRP-CC) Family (TC. 1.A.4)The TRP-CC family has also been called the store-operated calcium channel (SOC) family. The prototypical members include the Drosophila retinal proteinsTRP and TRPL (Montell and Rubin, 1989; Hardie and Minke, 1993). SOC members of the family mediate the entry of extracellular Ca2+ into cells in responseto depletion of intracellular Ca2+ stores (Clapham, 1996) and agonist stimulated production of inositol-1,4,5 trisphosphate (IP3). One member of the TRP-CCfamily, mammalian Htrp3, has been shown to form a tight complex with the IP3 receptor (TC #1.A.3.2.1). This interaction is apparently required for IP3 tostimulate Ca2+ release via Htrp3. The vanilloid receptor subtype 1 (VR1), which is the receptor for capsaicin (the ?hot? ingredient in chili peppers) and servesas a heat-activated ion channel in the pain pathway (Caterina et al., 1997), is also a member of this family. The stretch-inhibitable non-selective cation channel(SIC) is identical to the vanilloid receptor throughout all of its first 700 residues, but it exhibits a different sequence in its last 100 residues. VR1 and SICtransport monovalent cations as well as Ca2+. VR1 is about 10x more permeable to Ca2+ than to monovalent ions. Ca2+ overload probably causes cell deathafter chronic exposure to capsaicin. (McCleskey and Gold, 1999). [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273311 [Multi-domain]  Cd Length: 743  Bit Score: 54.70  E-value: 5.88e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056   54 LEKALDYIKNGVDVnicnqnGLNALHLASKEgHVEVVSELLQREANVDAATK--------------KGNTALHIASLAGQ 119
Cdd:TIGR00870   68 LTELLLNLSCRGAV------GDTLLHAISLE-YVDAVEAILLHLLAAFRKSGplelandqytseftPGITALHLAAHRQN 140
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  120 AEVVKVLVTNGANVNA----------QSQNGF----TPLYMAAQENHLEVVRFLLDNGASQSLATEDGFTPLavalqqgH 185
Cdd:TIGR00870  141 YEIVKLLLERGASVPAracgdffvksQGVDSFyhgeSPLNAAACLGSPSIVALLSEDPADILTADSLGNTLL-------H 213
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  186 DQVVslllENDTKGKVRLPALHIaarKDdtkaaaLLLQNDTNAD--VESKMVVNRAtesGFTPLHIAAHYGNINVATLLL 263
Cdd:TIGR00870  214 LLVM----ENEFKAEYEELSCQM---YN------FALSLLDKLRdsKELEVILNHQ---GLTPLKLAAKEGRIVLFRLKL 277

                   ..
gi 1907073056  264 NR 265
Cdd:TIGR00870  278 AI 279
TRPV1 cd22196
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), type 1; Vanilloid receptor 1 ...
606-720 6.77e-07

Transient Receptor Potential channel, Vanilloid subfamily (TRPV), type 1; Vanilloid receptor 1 (TRPV1), a capsaicin (vanilloid) receptor, is the founding member of the vanilloid TRP subfamily (TRPV). In humans, it is expressed in the brain, kidney, pancreas, testis, uterus, spleen, stomach, small intestine, lung and liver. TRPV1 has been implicated to have function in thermo-sensation (heat), autonomic thermoregulation, nociception, food intake regulation, and multiple functions in the gastrointestinal (GI) tract. The receptor has also been involved in growth cone guidance, long-term depression, endocannabinoid signaling and osmosensing in the central nervous system. TRPV1 is up regulated in several human pathological conditions including vulvodynia, GI inflammation, Crohn's disease and ulcerative colitis. TRPV1 knock-out mice exhibit impaired sensation to thermal-mechanical acute pain. The structure of TRPV shows the typical topology features of all Transient Receptor Potential (TRP) ion channel family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6 and large intracellular N- and C-terminal domains.


Pssm-ID: 411980 [Multi-domain]  Cd Length: 649  Bit Score: 54.43  E-value: 6.77e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  606 GLTPLHVAAHYDNQKVALLLLDQGASPHAAA----------KNGY----TPLHIAAKKNQMDIATSLLE---YGADANAV 668
Cdd:cd22196     94 GQTALHIAIERRNMHLVELLVQNGADVHARAsgeffkkkkgGPGFyfgeLPLSLAACTNQLDIVKFLLEnphSPADISAR 173
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907073056  669 TRQGIASVH--LAAQEGHVD-------MVSLLLSRNANVN-------LSNKSGLTPLHLAAQEDRVNV 720
Cdd:cd22196    174 DSMGNTVLHalVEVADNTPEntkfvtkMYNEILILGAKIRpllkleeITNKKGLTPLKLAAKTGKIGI 241
PHA02736 PHA02736
Viral ankyrin protein; Provisional
191-303 6.91e-07

Viral ankyrin protein; Provisional


Pssm-ID: 165103 [Multi-domain]  Cd Length: 154  Bit Score: 50.65  E-value: 6.91e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  191 LLLENDTKGKvrlPALHIAARKD--DTKAAALLLQnDTNADVESKMVVNratesGFTPLHIAAHYGNINVATLLLNRAAa 268
Cdd:PHA02736    47 LVLEYNRHGK---QCVHIVSNPDkaDPQEKLKLLM-EWGADINGKERVF-----GNTPLHIAVYTQNYELATWLCNQPG- 116
                           90       100       110
                   ....*....|....*....|....*....|....*..
gi 1907073056  269 VDFTARNDI--TPLHVASKRGNANMVKLLLDRGAKID 303
Cdd:PHA02736   117 VNMEILNYAfkTPYYVACERHDAKMMNILRAKGAQCK 153
Ank_4 pfam13637
Ankyrin repeats (many copies);
476-527 7.74e-07

Ankyrin repeats (many copies);


Pssm-ID: 372654 [Multi-domain]  Cd Length: 54  Bit Score: 47.65  E-value: 7.74e-07
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|..
gi 1907073056  476 TALHMAARSGQAEVVRYLVQDGAQVEAKAKDDQTPLHISARLGKADIVQQLL 527
Cdd:pfam13637    3 TALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLLL 54
Ank_5 pfam13857
Ankyrin repeats (many copies);
126-180 8.31e-07

Ankyrin repeats (many copies);


Pssm-ID: 433530 [Multi-domain]  Cd Length: 56  Bit Score: 47.73  E-value: 8.31e-07
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1907073056  126 LVTNG-ANVNAQSQNGFTPLYMAAQENHLEVVRFLLDNGASQSLATEDGFTPLAVA 180
Cdd:pfam13857    1 LLEHGpIDLNRLDGEGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEGLTALDLA 56
PLN03192 PLN03192
Voltage-dependent potassium channel; Provisional
185-412 1.31e-06

Voltage-dependent potassium channel; Provisional


Pssm-ID: 215625 [Multi-domain]  Cd Length: 823  Bit Score: 53.72  E-value: 1.31e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  185 HDQVVslLLENDTKGKVRLPALHIaarkDDtkaaalLLQNDTNADVESKMVVNRATesgftplhiAAHYGNINVATLLLN 264
Cdd:PLN03192   488 EDNVV--ILKNFLQHHKELHDLNV----GD------LLGDNGGEHDDPNMASNLLT---------VASTGNAALLEELLK 546
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  265 RAAAVDFTARNDITPLHVASKRGNANMVKLLLDRGAKIDAKTRDGLTPLHCGARSGHEQVVEMLLDRSApiLSKTKNGLS 344
Cdd:PLN03192   547 AKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHFAS--ISDPHAAGD 624
                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907073056  345 PLHMATQGDHLNCVQLLLQHNVPVDDVTNDYLTALHVAAHCGHYKVAKVLLDKKASPNAKAL-NGFTPL 412
Cdd:PLN03192   625 LLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDKANTdDDFSPT 693
PHA02798 PHA02798
ankyrin-like protein; Provisional
685-798 1.52e-06

ankyrin-like protein; Provisional


Pssm-ID: 222931 [Multi-domain]  Cd Length: 489  Bit Score: 52.91  E-value: 1.52e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  685 VDMVSLLLSRNANVNLSNKSGLTPL-----HLAAQEDRVNVAEVLVNQGAHVDAQTKMGYTPLHVGCHYG---NIKIVNF 756
Cdd:PHA02798    51 TDIVKLFINLGANVNGLDNEYSTPLctilsNIKDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGyinNLEILLF 130
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*
gi 1907073056  757 LLQHSAKVNAKTKNGYTALHQAAQQGHT---HIINVLLQNNASPN 798
Cdd:PHA02798   131 MIENGADTTLLDKDGFTMLQVYLQSNHHidiEIIKLLLEKGVDIN 175
Death_p75NR cd08311
Death domain of p75 Neurotrophin Receptor; Death Domain (DD) found in p75 neurotrophin ...
1509-1576 1.77e-06

Death domain of p75 Neurotrophin Receptor; Death Domain (DD) found in p75 neurotrophin receptor (p75NTR, NGFR, TNFRSF16). p75NTR binds members of the neurotrophin (NT) family including nerve growth factor (NGF), brain-derived neurotrophic factor (BDNF), and NT3, among others. It contains an NT-binding extracellular region that bears four cysteine-rich repeats, a transmembrane domain, and an intracellular DD. p75NTR plays roles in the immune, vascular, and nervous systems, and has been shown to promote cell death or survival, and to induce neurite outgrowth or collapse depending on its ligands and co-receptors. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.


Pssm-ID: 260025  Cd Length: 80  Bit Score: 47.28  E-value: 1.77e-06
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907073056 1509 SWTELARELNFSVDEINQI-RVENPnslisqSFMLLKKWVTRDGknATTDALTSVLTKINRIDIVTLLE 1576
Cdd:cd08311     20 DWRALAGELGYSAEEIDSFaREADP------CRALLTDWSAQDG--ATLGVLLTALRKIGRDDIVEILQ 80
Ank_5 pfam13857
Ankyrin repeats (many copies);
757-811 1.88e-06

Ankyrin repeats (many copies);


Pssm-ID: 433530 [Multi-domain]  Cd Length: 56  Bit Score: 46.57  E-value: 1.88e-06
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1907073056  757 LLQH-SAKVNAKTKNGYTALHQAAQQGHTHIINVLLQNNASPNELTVNGNTALAIA 811
Cdd:pfam13857    1 LLEHgPIDLNRLDGEGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEGLTALDLA 56
Ank_5 pfam13857
Ankyrin repeats (many copies);
526-580 1.95e-06

Ankyrin repeats (many copies);


Pssm-ID: 433530 [Multi-domain]  Cd Length: 56  Bit Score: 46.57  E-value: 1.95e-06
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1907073056  526 LLQQG-ASPNAATTSGYTPLHLAAREGHEDVAAFLLDHGASLSITTKKGFTPLHVA 580
Cdd:pfam13857    1 LLEHGpIDLNRLDGEGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEGLTALDLA 56
Ank_5 pfam13857
Ankyrin repeats (many copies);
690-744 2.37e-06

Ankyrin repeats (many copies);


Pssm-ID: 433530 [Multi-domain]  Cd Length: 56  Bit Score: 46.19  E-value: 2.37e-06
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 1907073056  690 LLLSRNANVNLSNKSGLTPLHLAAQEDRVNVAEVLVNQGAHVDAQTKMGYTPLHV 744
Cdd:pfam13857    1 LLEHGPIDLNRLDGEGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEGLTALDL 55
ANK smart00248
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four ...
407-434 2.39e-06

ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.


Pssm-ID: 197603 [Multi-domain]  Cd Length: 30  Bit Score: 45.66  E-value: 2.39e-06
                            10        20
                    ....*....|....*....|....*...
gi 1907073056   407 NGFTPLHIACKKNRIRVMELLLKHGASI 434
Cdd:smart00248    1 DGRTPLHLAAENGNLEVVKLLLDKGADI 28
Ank pfam00023
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ...
540-571 2.67e-06

Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity.


Pssm-ID: 425426 [Multi-domain]  Cd Length: 34  Bit Score: 45.36  E-value: 2.67e-06
                           10        20        30
                   ....*....|....*....|....*....|...
gi 1907073056  540 GYTPLHLAA-REGHEDVAAFLLDHGASLSITTK 571
Cdd:pfam00023    2 GNTPLHLAAgRRGNLEIVKLLLSKGADVNARDK 34
Death_DRs cd08784
Death Domain of Death Receptors; Death domain (DD) found in death receptor proteins. Death ...
1508-1567 2.93e-06

Death Domain of Death Receptors; Death domain (DD) found in death receptor proteins. Death receptors are members of the tumor necrosis factor (TNF) receptor superfamily, characterized by having a cytoplasmic DD. Known members of the family are Fas (CD95/APO-1), TNF-receptor 1 (TNFR1/TNFRSF1A/p55/CD120a), TNF-related apoptosis-inducing ligand receptor 1 (TRAIL-R1 /DR4), and receptor 2 (TRAIL-R2/DR5/APO-2/KILLER), as well as Death Receptor 3 (DR3/APO-3/TRAMP/WSL-1/LARD). They are involved in apoptosis signaling pathways. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.


Pssm-ID: 260054  Cd Length: 80  Bit Score: 46.80  E-value: 2.93e-06
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056 1508 LSWTELARELNFSVDEINQIRVENPNSLISQSFMLLKKWVTRDGKNATTDALTSVLTKIN 1567
Cdd:cd08784     12 SQWKGFVRKLGLNEAEIDEIKNDNVQDTAEAKYQMLRNWHQLTGRKAAYDTLIKDLKKMN 71
PTZ00322 PTZ00322
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
589-668 3.32e-06

6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional


Pssm-ID: 140343 [Multi-domain]  Cd Length: 664  Bit Score: 52.21  E-value: 3.32e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  589 ASLLLQKSASPDAAGKSGLTPLHVAAHYDNQKVALLLLDQGASPHAAAKNGYTPLHIAAKKNQMDIATSLLEYG-----A 663
Cdd:PTZ00322    98 ARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLSRHSqchfeL 177

                   ....*
gi 1907073056  664 DANAV 668
Cdd:PTZ00322   178 GANAK 182
PHA02736 PHA02736
Viral ankyrin protein; Provisional
670-763 3.90e-06

Viral ankyrin protein; Provisional


Pssm-ID: 165103 [Multi-domain]  Cd Length: 154  Bit Score: 48.72  E-value: 3.90e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  670 RQGIASVHLAAQEGHVD---MVSLLLSRNANVNLSN-KSGLTPLHLAAQEDRVNVAEVLVNQ-GAHVDAQTKMGYTPLHV 744
Cdd:PHA02736    53 RHGKQCVHIVSNPDKADpqeKLKLLMEWGADINGKErVFGNTPLHIAVYTQNYELATWLCNQpGVNMEILNYAFKTPYYV 132
                           90
                   ....*....|....*....
gi 1907073056  745 GCHYGNIKIVNFLLQHSAK 763
Cdd:PHA02736   133 ACERHDAKMMNILRAKGAQ 151
PHA02946 PHA02946
ankyin-like protein; Provisional
90-370 3.95e-06

ankyin-like protein; Provisional


Pssm-ID: 165256 [Multi-domain]  Cd Length: 446  Bit Score: 51.59  E-value: 3.95e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056   90 VSELLQREANVDAATKKGNTALHIASLAGQAEVVKVLVTNGANVNAQSQNGFTPLYM--AAQENHLEVVRFLLDNGAS-Q 166
Cdd:PHA02946    55 VEELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYlsGTDDEVIERINLLVQYGAKiN 134
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  167 SLATEDGFTPLAVAL---QQGHDQVVSLLLENDTKGKVRLPALHIAARKDDTKAAALLLQndtnadVESKMVVNRATESG 243
Cdd:PHA02946   135 NSVDEEGCGPLLACTdpsERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWM------MKLGISPSKPDHDG 208
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  244 FTPLHI--AAHYGNINVATLLLnraAAVDFTARNDI--TPLHVASKR-GNANMVKLLLDRGAKIDAKTrdgltpLHCGAR 318
Cdd:PHA02946   209 NTPLHIvcSKTVKNVDIINLLL---PSTDVNKQNKFgdSPLTLLIKTlSPAHLINKLLSTSNVITDQT------VNICIF 279
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|..
gi 1907073056  319 SGHEQVVEMLLDRSAPILSktknglSPLHMATQGDHLNCVQLLLQHNVPVDD 370
Cdd:PHA02946   280 YDRDDVLEIINDKGKQYDS------TDFKMAVEVGSIRCVKYLLDNDIICED 325
Ank_5 pfam13857
Ankyrin repeats (many copies);
591-646 4.36e-06

Ankyrin repeats (many copies);


Pssm-ID: 433530 [Multi-domain]  Cd Length: 56  Bit Score: 45.42  E-value: 4.36e-06
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1907073056  591 LLLQKSASPDAAGKSGLTPLHVAAHYDNQKVALLLLDQGASPHAAAKNGYTPLHIA 646
Cdd:pfam13857    1 LLEHGPIDLNRLDGEGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEGLTALDLA 56
PTZ00322 PTZ00322
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
545-639 4.43e-06

6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional


Pssm-ID: 140343 [Multi-domain]  Cd Length: 664  Bit Score: 51.82  E-value: 4.43e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  545 HLAArEGHEDVAAFLLDHGASLSITTKKGFTPLHVAAKYGKLEVASLLLQKSASPDAAGKSGLTPLHVAAHYDNQKVALL 624
Cdd:PTZ00322    88 QLAA-SGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQL 166
                           90
                   ....*....|....*
gi 1907073056  625 LLDQGASPHAAAKNG 639
Cdd:PTZ00322   167 LSRHSQCHFELGANA 181
Ank_5 pfam13857
Ankyrin repeats (many copies);
462-513 4.86e-06

Ankyrin repeats (many copies);


Pssm-ID: 433530 [Multi-domain]  Cd Length: 56  Bit Score: 45.42  E-value: 4.86e-06
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|..
gi 1907073056  462 HHGASPNTTNVRGETALHMAARSGQAEVVRYLVQDGAQVEAKAKDDQTPLHI 513
Cdd:pfam13857    4 HGPIDLNRLDGEGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEGLTALDL 55
PHA02989 PHA02989
ankyrin repeat protein; Provisional
61-298 5.13e-06

ankyrin repeat protein; Provisional


Pssm-ID: 222954 [Multi-domain]  Cd Length: 494  Bit Score: 51.28  E-value: 5.13e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056   61 IKNGVDVN-ICNQNGLNALHLASKEGHVEVVSELLQREANVDaatKKGNTALHIASLAGQAEV--------VKVLVTNGA 131
Cdd:PHA02989    23 LRTGFDVNeEYRGNSILLLYLKRKDVKIKIVKLLIDNGADVN---YKGYIETPLCAVLRNREItsnkikkiVKLLLKFGA 99
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  132 NVNAQSQNGFTPL--YMAAQE-NHLEVVRFLLDNGAS-QSLATEDGFTPLAVALQQG--HDQVVSLLLEN-----DTKGK 200
Cdd:PHA02989   100 DINLKTFNGVSPIvcFIYNSNiNNCDMLRFLLSKGINvNDVKNSRGYNLLHMYLESFsvKKDVIKILLSFgvnlfEKTSL 179
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  201 VRLPALHIAARKD----DTKAAALLLQN-------------------DTNADVESKMV-----------VNRATESGFTP 246
Cdd:PHA02989   180 YGLTPMNIYLRNDidviSIKVIKYLIKKgvnietnnngsesvlesflDNNKILSKKEFkvlnfilkyikINKKDKKGFNP 259
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|..
gi 1907073056  247 LHIAAHYGNINVATLLLNRAAAVDFTARNDITPLHVASKRGNANMVKLLLDR 298
Cdd:PHA02989   260 LLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRILQL 311
Ank_5 pfam13857
Ankyrin repeats (many copies);
60-114 5.21e-06

Ankyrin repeats (many copies);


Pssm-ID: 433530 [Multi-domain]  Cd Length: 56  Bit Score: 45.42  E-value: 5.21e-06
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1907073056   60 YIKNG-VDVNICNQNGLNALHLASKEGHVEVVSELLQREANVDAATKKGNTALHIA 114
Cdd:pfam13857    1 LLEHGpIDLNRLDGEGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEGLTALDLA 56
Ank_5 pfam13857
Ankyrin repeats (many copies);
625-679 6.40e-06

Ankyrin repeats (many copies);


Pssm-ID: 433530 [Multi-domain]  Cd Length: 56  Bit Score: 45.03  E-value: 6.40e-06
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1907073056  625 LLDQG-ASPHAAAKNGYTPLHIAAKKNQMDIATSLLEYGADANAVTRQGIASVHLA 679
Cdd:pfam13857    1 LLEHGpIDLNRLDGEGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEGLTALDLA 56
ANK smart00248
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four ...
275-304 6.83e-06

ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.


Pssm-ID: 197603 [Multi-domain]  Cd Length: 30  Bit Score: 44.12  E-value: 6.83e-06
                            10        20        30
                    ....*....|....*....|....*....|
gi 1907073056   275 NDITPLHVASKRGNANMVKLLLDRGAKIDA 304
Cdd:smart00248    1 DGRTPLHLAAENGNLEVVKLLLDKGADINA 30
Ank_4 pfam13637
Ankyrin repeats (many copies);
771-823 6.84e-06

Ankyrin repeats (many copies);


Pssm-ID: 372654 [Multi-domain]  Cd Length: 54  Bit Score: 44.96  E-value: 6.84e-06
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|...
gi 1907073056  771 GYTALHQAAQQGHTHIINVLLQNNASPNELTVNGNTALAIARRLGYISVVDTL 823
Cdd:pfam13637    1 ELTALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLL 53
PHA02716 PHA02716
CPXV016; CPX019; EVM010; Provisional
241-577 7.04e-06

CPXV016; CPX019; EVM010; Provisional


Pssm-ID: 165089 [Multi-domain]  Cd Length: 764  Bit Score: 51.07  E-value: 7.04e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  241 ESGFTPLHiaAHYGNINVAT----LLLNRAAAVDFTARNDITPLHVASKRGN--ANMVKLLLDRGAKIDAKTRDGLTPLH 314
Cdd:PHA02716   175 KTGYGILH--AYLGNMYVDIdileWLCNNGVNVNLQNNHLITPLHTYLITGNvcASVIKKIIELGGDMDMKCVNGMSPIM 252
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  315 ---CGARSGHEQVVEMLLDRSAPilSKTKNGLSPLH----MATQGDhLNCVQLLLQHNVPVDDVTNDYLTALH--VAAHC 385
Cdd:PHA02716   253 tyiINIDNINPEITNIYIESLDG--NKVKNIPMILHsyitLARNID-ISVVYSFLQPGVKLHYKDSAGRTCLHqyILRHN 329
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  386 GHYKVAKVLLDKKASPNAKALNGFTPLH----IACKKN----------RIRVMELLLKHGASIQAVTESGLTP----IHV 447
Cdd:PHA02716   330 ISTDIIKLLHEYGNDLNEPDNIGNTVLHtylsMLSVVNildpetdndiRLDVIQCLISLGADITAVNCLGYTPltsyICT 409
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  448 AAFMGHVNIVSQLMhhgaspnttnvrGETALHMaarsgqaeVVRYLVQDgaqveAKAKDDQTPLHISARLGKADIVQQLL 527
Cdd:PHA02716   410 AQNYMYYDIIDCLI------------SDKVLNM--------VKHRILQD-----LLIRVDDTPCIIHHIIAKYNIPTDLY 464
                          330       340       350       360       370       380       390
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1907073056  528 QQGASP--------------------NAATTSGYTPLHLAAREGHE-----DVAAFLLDHGASLSITTKKGFTPL 577
Cdd:PHA02716   465 TDEYEPydstkihdvyhcaiierynnAVCETSGMTPLHVSIISHTNanivmDSFVYLLSIQYNINIPTKNGVTPL 539
PTZ00322 PTZ00322
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
710-804 7.51e-06

6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional


Pssm-ID: 140343 [Multi-domain]  Cd Length: 664  Bit Score: 51.05  E-value: 7.51e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  710 HLAAQEDRVNvAEVLVNQGAHVDAQTKMGYTPLHVGCHYGNIKIVNFLLQHSAKVNAKTKNGYTALHQAAQQGHTHIINV 789
Cdd:PTZ00322    88 QLAASGDAVG-ARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQL 166
                           90
                   ....*....|....*
gi 1907073056  790 LLQNNASPNELTVNG 804
Cdd:PTZ00322   167 LSRHSQCHFELGANA 181
ANK smart00248
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four ...
540-568 7.84e-06

ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.


Pssm-ID: 197603 [Multi-domain]  Cd Length: 30  Bit Score: 44.12  E-value: 7.84e-06
                            10        20
                    ....*....|....*....|....*....
gi 1907073056   540 GYTPLHLAAREGHEDVAAFLLDHGASLSI 568
Cdd:smart00248    2 GRTPLHLAAENGNLEVVKLLLDKGADINA 30
PTZ00322 PTZ00322
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
347-430 8.31e-06

6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional


Pssm-ID: 140343 [Multi-domain]  Cd Length: 664  Bit Score: 50.67  E-value: 8.31e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  347 HMATQGDHLNcVQLLLQHNVPVDDVTNDYLTALHVAAHCGHYKVAKVLLDKKASPNAKALNGFTPLHIACKKNRIRVMEL 426
Cdd:PTZ00322    88 QLAASGDAVG-ARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQL 166

                   ....
gi 1907073056  427 LLKH 430
Cdd:PTZ00322   167 LSRH 170
TRPV cd21882
Transient Receptor Potential channel, Vanilloid subfamily (TRPV); The vanilloid TRP subfamily ...
603-759 9.60e-06

Transient Receptor Potential channel, Vanilloid subfamily (TRPV); The vanilloid TRP subfamily (TRPV), named after the vanilloid receptor 1 (TRPV1), consists of six members: four thermo-sensing channels (TRPV1, TRPV2, TRPV3, and TRPV4) and two Ca2+ selective channels (TRPV5 and TRPV6). The calcium-selective channels TRPV5 and TRPV6 can be heterotetramers and are important for general Ca2+ homeostasis. All four channels within the TRPV1-4 group show temperature-invoked currents when expressed in heterologous cell systems, ranging from activation at ~25C for TRPV4 to ~52C for TRPV2. The structure of TRPV shows the typical topology features of all Transient Receptor Potential (TRP) ion channel family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6 and large intracellular N- and C-terminal domains. The TRP family consists of membrane proteins that function as ion channels that communicate between the cell and its environment, by a vast array of physical or chemical stimuli, including radiation (in the form of temperature, infrared ,or light) and pressure (osmotic or mechanical). TRP channels are formed by a tetrameric complex of channel subunits. Based on sequence identity, the mammalian TRP channel family is classified into six subfamilies, with significant sequence similarity within the transmembrane domains, but very low similarity in their N- and C-terminal cytoplasmic regions. The six subfamilies are named based on their first member: TRPC (canonical), TRPV (vanilloid), TRPM (melastatin), TRPA (ankyrin), TRPML (mucolipin), and TRPP (polycystic).


Pssm-ID: 411975 [Multi-domain]  Cd Length: 600  Bit Score: 50.65  E-value: 9.60e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  603 GKSGLTPLHVAAHYDNQKV---ALLLLD---QGASPHAAAK--------NGYTPLHIAAKKNQMDIATSLLEYGADANAV 668
Cdd:cd21882     23 GATGKTCLHKAALNLNDGVneaIMLLLEaapDSGNPKELVNapctdefyQGQTALHIAIENRNLNLVRLLVENGADVSAR 102
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  669 TRQ-------------GIASVHLAAQEGHVDMVSLLLSRN---ANVNLSNKSGLTPLH-LAAQEDRVNVAEVLVNQ---- 727
Cdd:cd21882    103 ATGrffrkspgnlfyfGELPLSLAACTNQEEIVRLLLENGaqpAALEAQDSLGNTVLHaLVLQADNTPENSAFVCQmynl 182
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|...
gi 1907073056  728 ----GAHVDAQTKM-------GYTPLHVGCHYGNIKIVNFLLQ 759
Cdd:cd21882    183 llsyGAHLDPTQQLeeipnhqGLTPLKLAAVEGKIVMFQHILQ 225
PTZ00322 PTZ00322
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
677-761 9.60e-06

6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional


Pssm-ID: 140343 [Multi-domain]  Cd Length: 664  Bit Score: 50.67  E-value: 9.60e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  677 HLAAQEGHVDmVSLLLSRNANVNLSNKSGLTPLHLAAQEDRVNVAEVLVNQGAHVDAQTKMGYTPLHVGCHYGNIKIVNF 756
Cdd:PTZ00322    88 QLAASGDAVG-ARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQL 166

                   ....*
gi 1907073056  757 LLQHS 761
Cdd:PTZ00322   167 LSRHS 171
Ank_5 pfam13857
Ankyrin repeats (many copies);
93-147 1.07e-05

Ankyrin repeats (many copies);


Pssm-ID: 433530 [Multi-domain]  Cd Length: 56  Bit Score: 44.64  E-value: 1.07e-05
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1907073056   93 LLQRE-ANVDAATKKGNTALHIASLAGQAEVVKVLVTNGANVNAQSQNGFTPLYMA 147
Cdd:pfam13857    1 LLEHGpIDLNRLDGEGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEGLTALDLA 56
TRPV1-4 cd22193
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 1-4; TRPV1-4 are ...
606-720 1.11e-05

Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 1-4; TRPV1-4 are thermo-sensing channels that function directly in temperature-sensing and nociception; they share substantial structural and functional properties. Transient Receptor Potential (TRP) ion channels activated by temperature (thermo TRPs) are important molecular players in acute, inflammatory, and chronic pain states. So far, 11 TRP channels in mammalian cells have been identified as thermosensitive TRP (thermo-TRP) channels. TRPV1-4 channels are activated by different heat temperatures, for example, TRPV1 and TRPV2 are activated by high temperatures (>43C and >55C, respectively). TRPV1-4 belong to the vanilloid TRP subfamily (TRPV), named after the founding member vanilloid receptor 1 (TRPV1). The structure of TRPV shows the typical topology features of all TRP ion channel family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6 and large intracellular N- and C-terminal domains.


Pssm-ID: 411977 [Multi-domain]  Cd Length: 607  Bit Score: 50.56  E-value: 1.11e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  606 GLTPLHVAAHYDNQKVALLLLDQGASPHAAAKN--------------GYTPLHIAAKKNQMDIATSLLEYG---ADANAV 668
Cdd:cd22193     76 GQTALHIAIERRQGDIVALLVENGADVHAHAKGrffqpkyqgegfyfGELPLSLAACTNQPDIVQYLLENEhqpADIEAQ 155
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907073056  669 TRQGIASVH--LAAQEGHVD-------MVSLLLSRNANV-------NLSNKSGLTPLHLAAQEDRVNV 720
Cdd:cd22193    156 DSRGNTVLHalVTVADNTKEntkfvtrMYDMILIRGAKLcptveleEIRNNDGLTPLQLAAKMGKIEI 223
PTZ00322 PTZ00322
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
202-329 1.33e-05

6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional


Pssm-ID: 140343 [Multi-domain]  Cd Length: 664  Bit Score: 50.28  E-value: 1.33e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  202 RLPALHIAARKDDTKAAALLLQNDTNADVESKMVVNRAtesgftplHIAAHyGNINVATLLLNRAAAVDFTARNDITPLH 281
Cdd:PTZ00322    50 HLEALEATENKDATPDHNLTTEEVIDPVVAHMLTVELC--------QLAAS-GDAVGARILLTGGADPNCRDYDGRTPLH 120
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*...
gi 1907073056  282 VASKRGNANMVKLLLDRGAKIDAKTRDGLTPLHCGARSGHEQVVEMLL 329
Cdd:PTZ00322   121 IACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLS 168
Ank_5 pfam13857
Ankyrin repeats (many copies);
362-415 1.45e-05

Ankyrin repeats (many copies);


Pssm-ID: 433530 [Multi-domain]  Cd Length: 56  Bit Score: 44.26  E-value: 1.45e-05
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1907073056  362 LQHNVPVDDVTNDY--LTALHVAAHCGHYKVAKVLLDKKASPNAKALNGFTPLHIA 415
Cdd:pfam13857    1 LLEHGPIDLNRLDGegYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEGLTALDLA 56
PHA02791 PHA02791
ankyrin-like protein; Provisional
406-576 1.52e-05

ankyrin-like protein; Provisional


Pssm-ID: 165154 [Multi-domain]  Cd Length: 284  Bit Score: 48.88  E-value: 1.52e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  406 LNGFTPLHIACKKNRIRVMELLLKHGAsIQAVTESGLtPIHVAAFMGHVNIVSQLMHHGASPNTTNVRGETALHMAARSG 485
Cdd:PHA02791    28 VHGHSALYYAIADNNVRLVCTLLNAGA-LKNLLENEF-PLHQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAVDSG 105
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  486 QAEVVRYLVQDGAQVEAKAKDD-QTPLHISARLGKADIVQQLLQQGASPNAATTSgYTPLHLAAREGHEDVAAFLLDHGA 564
Cdd:PHA02791   106 NMQTVKLFVKKNWRLMFYGKTGwKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAIL-LSCIHITIKNGHVDMMILLLDYMT 184
                          170
                   ....*....|..
gi 1907073056  565 SLSITTKKGFTP 576
Cdd:PHA02791   185 STNTNNSLLFIP 196
PTZ00322 PTZ00322
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
93-160 1.83e-05

6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional


Pssm-ID: 140343 [Multi-domain]  Cd Length: 664  Bit Score: 49.90  E-value: 1.83e-05
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907073056   93 LLQREANVDAATKKGNTALHIASLAGQAEVVKVLVTNGANVNAQSQNGFTPLYMAAQENHLEVVRFLL 160
Cdd:PTZ00322   101 LLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLS 168
ANK smart00248
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four ...
139-165 1.95e-05

ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.


Pssm-ID: 197603 [Multi-domain]  Cd Length: 30  Bit Score: 42.96  E-value: 1.95e-05
                            10        20
                    ....*....|....*....|....*..
gi 1907073056   139 NGFTPLYMAAQENHLEVVRFLLDNGAS 165
Cdd:smart00248    1 DGRTPLHLAAENGNLEVVKLLLDKGAD 27
Ank_5 pfam13857
Ankyrin repeats (many copies);
658-712 2.27e-05

Ankyrin repeats (many copies);


Pssm-ID: 433530 [Multi-domain]  Cd Length: 56  Bit Score: 43.49  E-value: 2.27e-05
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1907073056  658 LLEYG-ADANAVTRQGIASVHLAAQEGHVDMVSLLLSRNANVNLSNKSGLTPLHLA 712
Cdd:pfam13857    1 LLEHGpIDLNRLDGEGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEGLTALDLA 56
Ank_3 pfam13606
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ...
407-436 2.37e-05

Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities.


Pssm-ID: 404492 [Multi-domain]  Cd Length: 30  Bit Score: 42.63  E-value: 2.37e-05
                           10        20        30
                   ....*....|....*....|....*....|
gi 1907073056  407 NGFTPLHIACKKNRIRVMELLLKHGASIQA 436
Cdd:pfam13606    1 DGNTPLHLAARNGNLEIVKLLLERGADINA 30
TRPV3 cd22194
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), type 3; TRPV3 is a ...
606-714 2.54e-05

Transient Receptor Potential channel, Vanilloid subfamily (TRPV), type 3; TRPV3 is a temperature-sensitive Transient Receptor Potential (TRP) ion channel that is activated by warm temperatures, synthetic small-molecule chemicals, and natural compounds from plants. TRPV3 function is regulated by physiological factors such as extracellular divalent cations and acidic pH, intracellular adenosine triphosphate, membrane voltage, and arachidonic acid. It is expressed in both neuronal and non-neuronal tissues including epidermal keratinocytes, epithelial cells in the gut, endothelial cells in blood vessels, and neurons in dorsal root ganglia and CNS. TRPV3 null mice have abnormal hair morphogenesis and compromised skin barrier function. It may play roles in inflammatory skin disorders, such as itch and pain sensation. TRPV3 is also expressed by many neuronal and non-neuronal tissues, showing that TRPV3 might play roles in other unknown cellular and physiological functions. TRPV3 belongs to the vanilloid TRP subfamily (TRPV), named after the founding member vanilloid receptor 1 (TRPV1). The structure of TRPV shows the typical topology features of all TRP ion channel family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6 and large intracellular N- and C-terminal domains.


Pssm-ID: 411978 [Multi-domain]  Cd Length: 680  Bit Score: 49.37  E-value: 2.54e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  606 GLTPLHVAAHYDNQKVALLLLDQGASPHAAAKN--------------GYTPLHIAAKKNQMDIATSLLEYGAD------- 664
Cdd:cd22194    141 GQTALNIAIERRQGDIVKLLIAKGADVNAHAKGvffnpkykhegfyfGETPLALAACTNQPEIVQLLMEKESTditsqds 220
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 1907073056  665 -ANAVTRqgiASVHLAAQ-EGHVD----MVSLLLSRNANVNL---SNKSGLTPLHLAAQ 714
Cdd:cd22194    221 rGNTVLH---ALVTVAEDsKTQNDfvkrMYDMILLKSENKNLetiRNNEGLTPLQLAAK 276
Ank_5 pfam13857
Ankyrin repeats (many copies);
427-481 2.55e-05

Ankyrin repeats (many copies);


Pssm-ID: 433530 [Multi-domain]  Cd Length: 56  Bit Score: 43.49  E-value: 2.55e-05
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1907073056  427 LLKHG-ASIQAVTESGLTPIHVAAFMGHVNIVSQLMHHGASPNTTNVRGETALHMA 481
Cdd:pfam13857    1 LLEHGpIDLNRLDGEGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEGLTALDLA 56
TRPV3 cd22194
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), type 3; TRPV3 is a ...
392-527 2.96e-05

Transient Receptor Potential channel, Vanilloid subfamily (TRPV), type 3; TRPV3 is a temperature-sensitive Transient Receptor Potential (TRP) ion channel that is activated by warm temperatures, synthetic small-molecule chemicals, and natural compounds from plants. TRPV3 function is regulated by physiological factors such as extracellular divalent cations and acidic pH, intracellular adenosine triphosphate, membrane voltage, and arachidonic acid. It is expressed in both neuronal and non-neuronal tissues including epidermal keratinocytes, epithelial cells in the gut, endothelial cells in blood vessels, and neurons in dorsal root ganglia and CNS. TRPV3 null mice have abnormal hair morphogenesis and compromised skin barrier function. It may play roles in inflammatory skin disorders, such as itch and pain sensation. TRPV3 is also expressed by many neuronal and non-neuronal tissues, showing that TRPV3 might play roles in other unknown cellular and physiological functions. TRPV3 belongs to the vanilloid TRP subfamily (TRPV), named after the founding member vanilloid receptor 1 (TRPV1). The structure of TRPV shows the typical topology features of all TRP ion channel family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6 and large intracellular N- and C-terminal domains.


Pssm-ID: 411978 [Multi-domain]  Cd Length: 680  Bit Score: 48.99  E-value: 2.96e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  392 KVLLDkkASPNAKALNGFTPLHIACKKNRIRVMELLLKHGASIQAVTES--------------GLTPIHVAAFMGHVNIV 457
Cdd:cd22194    127 DRFIN--AEYTEEAYEGQTALNIAIERRQGDIVKLLIAKGADVNAHAKGvffnpkykhegfyfGETPLALAACTNQPEIV 204
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  458 SQLMHHGASPNTT-NVRGETALH---MAARSGQAE---VVR-----YLVQDGAQVEA-KAKDDQTPLHISARLGKADIVQ 524
Cdd:cd22194    205 QLLMEKESTDITSqDSRGNTVLHalvTVAEDSKTQndfVKRmydmiLLKSENKNLETiRNNEGLTPLQLAAKMGKAEILK 284

                   ...
gi 1907073056  525 QLL 527
Cdd:cd22194    285 YIL 287
Ank pfam00023
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ...
106-136 3.46e-05

Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity.


Pssm-ID: 425426 [Multi-domain]  Cd Length: 34  Bit Score: 42.28  E-value: 3.46e-05
                           10        20        30
                   ....*....|....*....|....*....|..
gi 1907073056  106 KGNTALHIASL-AGQAEVVKVLVTNGANVNAQ 136
Cdd:pfam00023    1 DGNTPLHLAAGrRGNLEIVKLLLSKGADVNAR 32
Ank pfam00023
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ...
638-670 3.78e-05

Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity.


Pssm-ID: 425426 [Multi-domain]  Cd Length: 34  Bit Score: 42.28  E-value: 3.78e-05
                           10        20        30
                   ....*....|....*....|....*....|....
gi 1907073056  638 NGYTPLHIAAKK-NQMDIATSLLEYGADANAVTR 670
Cdd:pfam00023    1 DGNTPLHLAAGRrGNLEIVKLLLSKGADVNARDK 34
Ank pfam00023
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ...
738-769 3.89e-05

Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity.


Pssm-ID: 425426 [Multi-domain]  Cd Length: 34  Bit Score: 42.28  E-value: 3.89e-05
                           10        20        30
                   ....*....|....*....|....*....|...
gi 1907073056  738 GYTPLHVGC-HYGNIKIVNFLLQHSAKVNAKTK 769
Cdd:pfam00023    2 GNTPLHLAAgRRGNLEIVKLLLSKGADVNARDK 34
Ank pfam00023
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ...
407-439 4.08e-05

Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity.


Pssm-ID: 425426 [Multi-domain]  Cd Length: 34  Bit Score: 42.28  E-value: 4.08e-05
                           10        20        30
                   ....*....|....*....|....*....|....
gi 1907073056  407 NGFTPLHIACKK-NRIRVMELLLKHGASIQAVTE 439
Cdd:pfam00023    1 DGNTPLHLAAGRrGNLEIVKLLLSKGADVNARDK 34
ANK smart00248
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four ...
106-135 4.15e-05

ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.


Pssm-ID: 197603 [Multi-domain]  Cd Length: 30  Bit Score: 42.19  E-value: 4.15e-05
                            10        20        30
                    ....*....|....*....|....*....|
gi 1907073056   106 KGNTALHIASLAGQAEVVKVLVTNGANVNA 135
Cdd:smart00248    1 DGRTPLHLAAENGNLEVVKLLLDKGADINA 30
PHA02798 PHA02798
ankyrin-like protein; Provisional
60-306 5.14e-05

ankyrin-like protein; Provisional


Pssm-ID: 222931 [Multi-domain]  Cd Length: 489  Bit Score: 47.91  E-value: 5.14e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056   60 YIKNGVDVNICNQNGLNALHLASKEGHV---EVVSELLQREANVDAATKKGNTALHIASLAG---QAEVVKVLVTNGANV 133
Cdd:PHA02798    95 LIENGADINKKNSDGETPLYCLLSNGYInnlEILLFMIENGADTTLLDKDGFTMLQVYLQSNhhiDIEIIKLLLEKGVDI 174
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  134 NAQS-QNGFTPLYMAAQEN----HLEVVRFLLDNGAsqSLATEDGFTPlavalQQGHDQVVSLLLENdtkgkvrlpalhi 208
Cdd:PHA02798   175 NTHNnKEKYDTLHCYFKYNidriDADILKLFVDNGF--IINKENKSHK-----KKFMEYLNSLLYDN------------- 234
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  209 aaRKDDTKAAALLLqndtnadveSKMVVNRATESGFTPLHIAAHYGNINVATLLLNRAAAVDFTARNDITPLHVASKRGN 288
Cdd:PHA02798   235 --KRFKKNILDFIF---------SYIDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINIITELGNTCLFTAFENES 303
                          250
                   ....*....|....*...
gi 1907073056  289 ANMVKLLLDRgaKIDAKT 306
Cdd:PHA02798   304 KFIFNSILNK--KPNKNT 319
PHA02874 PHA02874
ankyrin repeat protein; Provisional
683-823 6.05e-05

ankyrin repeat protein; Provisional


Pssm-ID: 165205 [Multi-domain]  Cd Length: 434  Bit Score: 47.65  E-value: 6.05e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  683 GHVDMVSLLLSRNAN-VNLSNKSGLTPLHLAAQEDRVNVAEVLVNQGAHVD-AQTKMGY---TPLHVGCH--------YG 749
Cdd:PHA02874    12 GDIEAIEKIIKNKGNcINISVDETTTPLIDAIRSGDAKIVELFIKHGADINhINTKIPHpllTAIKIGAHdiikllidNG 91
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  750 -----------NIKIVNFLLQHSAKVNAKTKNGYTALHQAAQQGHTHIINVLLQNNASPNELTVNGNTALAIARRLGYIS 818
Cdd:PHA02874    92 vdtsilpipciEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFD 171

                   ....*
gi 1907073056  819 VVDTL 823
Cdd:PHA02874   172 IIKLL 176
Ank pfam00023
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ...
275-307 6.11e-05

Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity.


Pssm-ID: 425426 [Multi-domain]  Cd Length: 34  Bit Score: 41.89  E-value: 6.11e-05
                           10        20        30
                   ....*....|....*....|....*....|....
gi 1907073056  275 NDITPLHVASKR-GNANMVKLLLDRGAKIDAKTR 307
Cdd:pfam00023    1 DGNTPLHLAAGRrGNLEIVKLLLSKGADVNARDK 34
ANK smart00248
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four ...
737-766 7.86e-05

ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.


Pssm-ID: 197603 [Multi-domain]  Cd Length: 30  Bit Score: 41.42  E-value: 7.86e-05
                            10        20        30
                    ....*....|....*....|....*....|
gi 1907073056   737 MGYTPLHVGCHYGNIKIVNFLLQHSAKVNA 766
Cdd:smart00248    1 DGRTPLHLAAENGNLEVVKLLLDKGADINA 30
Ank_5 pfam13857
Ankyrin repeats (many copies);
492-547 8.47e-05

Ankyrin repeats (many copies);


Pssm-ID: 433530 [Multi-domain]  Cd Length: 56  Bit Score: 41.95  E-value: 8.47e-05
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1907073056  492 YLVQDGAQVEAKAKDDQTPLHISARLGKADIVQQLLQQGASPNAATTSGYTPLHLA 547
Cdd:pfam13857    1 LLEHGPIDLNRLDGEGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEGLTALDLA 56
Ank pfam00023
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ...
73-105 8.61e-05

Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity.


Pssm-ID: 425426 [Multi-domain]  Cd Length: 34  Bit Score: 41.12  E-value: 8.61e-05
                           10        20        30
                   ....*....|....*....|....*....|....
gi 1907073056   73 NGLNALHLAS-KEGHVEVVSELLQREANVDAATK 105
Cdd:pfam00023    1 DGNTPLHLAAgRRGNLEIVKLLLSKGADVNARDK 34
Ank_5 pfam13857
Ankyrin repeats (many copies);
731-778 8.90e-05

Ankyrin repeats (many copies);


Pssm-ID: 433530 [Multi-domain]  Cd Length: 56  Bit Score: 41.95  E-value: 8.90e-05
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*...
gi 1907073056  731 VDAQTKMGYTPLHVGCHYGNIKIVNFLLQHSAKVNAKTKNGYTALHQA 778
Cdd:pfam13857    9 LNRLDGEGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEGLTALDLA 56
PHA02859 PHA02859
ankyrin repeat protein; Provisional
641-773 8.94e-05

ankyrin repeat protein; Provisional


Pssm-ID: 165195 [Multi-domain]  Cd Length: 209  Bit Score: 45.58  E-value: 8.94e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  641 TPLH--IAAKKNQMDIATSLLEYGADANAVTR-QGIASVH--LAAQEG-HVDMVSLLLSRNANVNLSNKSGLTPLH--LA 712
Cdd:PHA02859    53 TPIFscLEKDKVNVEILKFLIENGADVNFKTRdNNLSALHhyLSFNKNvEPEILKILIDSGSSITEEDEDGKNLLHmyMC 132
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907073056  713 AQEDRVNVAEVLVnqgahvdaqtKMGYTPLHVGCHYGNI-----------KIVNFLLQHSAKVNAKTKNGYT 773
Cdd:PHA02859   133 NFNVRINVIKLLI----------DSGVSFLNKDFDNNNIlysyilfhsdkKIFDFLTSLGIDINETNKSGYN 194
Ank_3 pfam13606
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ...
738-766 8.99e-05

Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities.


Pssm-ID: 404492 [Multi-domain]  Cd Length: 30  Bit Score: 41.09  E-value: 8.99e-05
                           10        20
                   ....*....|....*....|....*....
gi 1907073056  738 GYTPLHVGCHYGNIKIVNFLLQHSAKVNA 766
Cdd:pfam13606    2 GNTPLHLAARNGNLEIVKLLLERGADINA 30
Ank_3 pfam13606
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ...
540-568 9.08e-05

Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities.


Pssm-ID: 404492 [Multi-domain]  Cd Length: 30  Bit Score: 41.09  E-value: 9.08e-05
                           10        20
                   ....*....|....*....|....*....
gi 1907073056  540 GYTPLHLAAREGHEDVAAFLLDHGASLSI 568
Cdd:pfam13606    2 GNTPLHLAARNGNLEIVKLLLERGADINA 30
TRPV cd21882
Transient Receptor Potential channel, Vanilloid subfamily (TRPV); The vanilloid TRP subfamily ...
241-429 9.34e-05

Transient Receptor Potential channel, Vanilloid subfamily (TRPV); The vanilloid TRP subfamily (TRPV), named after the vanilloid receptor 1 (TRPV1), consists of six members: four thermo-sensing channels (TRPV1, TRPV2, TRPV3, and TRPV4) and two Ca2+ selective channels (TRPV5 and TRPV6). The calcium-selective channels TRPV5 and TRPV6 can be heterotetramers and are important for general Ca2+ homeostasis. All four channels within the TRPV1-4 group show temperature-invoked currents when expressed in heterologous cell systems, ranging from activation at ~25C for TRPV4 to ~52C for TRPV2. The structure of TRPV shows the typical topology features of all Transient Receptor Potential (TRP) ion channel family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6 and large intracellular N- and C-terminal domains. The TRP family consists of membrane proteins that function as ion channels that communicate between the cell and its environment, by a vast array of physical or chemical stimuli, including radiation (in the form of temperature, infrared ,or light) and pressure (osmotic or mechanical). TRP channels are formed by a tetrameric complex of channel subunits. Based on sequence identity, the mammalian TRP channel family is classified into six subfamilies, with significant sequence similarity within the transmembrane domains, but very low similarity in their N- and C-terminal cytoplasmic regions. The six subfamilies are named based on their first member: TRPC (canonical), TRPV (vanilloid), TRPM (melastatin), TRPA (ankyrin), TRPML (mucolipin), and TRPP (polycystic).


Pssm-ID: 411975 [Multi-domain]  Cd Length: 600  Bit Score: 47.18  E-value: 9.34e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  241 ESGFTPLHIAA---HYGNINVATLLLNRAAAVDFTAR-----------NDITPLHVASKRGNANMVKLLLDRGAKIDAKT 306
Cdd:cd21882     24 ATGKTCLHKAAlnlNDGVNEAIMLLLEAAPDSGNPKElvnapctdefyQGQTALHIAIENRNLNLVRLLVENGADVSARA 103
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  307 RD-------------GLTPLHCGARSGHEQVVEMLLDRSAPILSKTKN---GLSPLHMatqgdhlncvqLLLQHNVPVDD 370
Cdd:cd21882    104 TGrffrkspgnlfyfGELPLSLAACTNQEEIVRLLLENGAQPAALEAQdslGNTVLHA-----------LVLQADNTPEN 172
                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907073056  371 ---VTNDYLTALHVAAHCGHykvakvLLDKKASPNAKalnGFTPLHIACKKNRIRVMELLLK 429
Cdd:cd21882    173 safVCQMYNLLLSYGAHLDP------TQQLEEIPNHQ---GLTPLKLAAVEGKIVMFQHILQ 225
PTZ00322 PTZ00322
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
64-144 9.45e-05

6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional


Pssm-ID: 140343 [Multi-domain]  Cd Length: 664  Bit Score: 47.59  E-value: 9.45e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056   64 GVDVNICNQNGLNALHLASKEGHVEVVSELLQREANVDAATKKGNTALHIASLAGQAEVVKVLVTN-------GANVNAQ 136
Cdd:PTZ00322   105 GADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLSRHsqchfelGANAKPD 184

                   ....*...
gi 1907073056  137 SQNGFTPL 144
Cdd:PTZ00322   185 SFTGKPPS 192
ANK smart00248
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four ...
572-601 1.10e-04

ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.


Pssm-ID: 197603 [Multi-domain]  Cd Length: 30  Bit Score: 41.03  E-value: 1.10e-04
                            10        20        30
                    ....*....|....*....|....*....|
gi 1907073056   572 KGFTPLHVAAKYGKLEVASLLLQKSASPDA 601
Cdd:smart00248    1 DGRTPLHLAAENGNLEVVKLLLDKGADINA 30
TRPV2 cd22197
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), type 2; TRPV2 is closely ...
369-529 1.17e-04

Transient Receptor Potential channel, Vanilloid subfamily (TRPV), type 2; TRPV2 is closely related to TRPV1, sharing high sequence identity (>50%), but TRPV2 shows a higher temperature threshold and sensitivity for activation than TRPV1. TRPV2 can be stimulated by ligands or lipids, and is involved in osmosensation and mechanosensation. TRPV2 is expressed in both neuronal and non-neuronal tissues, and it has been implicated in diverse physiological and pathophysiological processes, including cardiac-structure maintenance, innate immunity, and cancer. TRPV2 belongs to the vanilloid TRP subfamily (TRPV), named after the founding member vanilloid receptor 1 (TRPV1). The structure of TRPV shows the typical topology features of all Transient Receptor Potential (TRP) ion channel family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6 and large intracellular N- and C-terminal domains.


Pssm-ID: 411981 [Multi-domain]  Cd Length: 640  Bit Score: 47.16  E-value: 1.17e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  369 DDVTNDYLTALHVAAHCGHYKVakvLLDkkASPNAKALNGFTPLHIACKKNRIRVMELLLKHGASIQAVTES-------- 440
Cdd:cd22197     60 DGVNACIMPLLEIDKDSGNPKP---LVN--AQCTDEYYRGHSALHIAIEKRSLQCVKLLVENGADVHARACGrffqkkqg 134
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  441 -----GLTPIHVAAFMGHVNIVSQLM---HHGASPNTTNVRGETALH----MAARSGQ--AEVVRY---LVQDGAQVEAK 503
Cdd:cd22197    135 tcfyfGELPLSLAACTKQWDVVNYLLenpHQPASLQAQDSLGNTVLHalvmIADNSPEnsALVIKMydgLLQAGARLCPT 214
                          170       180       190
                   ....*....|....*....|....*....|...
gi 1907073056  504 AKDDQ-------TPLHISARLGKADIVQQLLQQ 529
Cdd:cd22197    215 VQLEEisnheglTPLKLAAKEGKIEIFRHILQR 247
Ank pfam00023
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ...
572-604 1.33e-04

Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity.


Pssm-ID: 425426 [Multi-domain]  Cd Length: 34  Bit Score: 40.74  E-value: 1.33e-04
                           10        20        30
                   ....*....|....*....|....*....|....
gi 1907073056  572 KGFTPLHVAA-KYGKLEVASLLLQKSASPDAAGK 604
Cdd:pfam00023    1 DGNTPLHLAAgRRGNLEIVKLLLSKGADVNARDK 34
Ank_3 pfam13606
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ...
638-667 1.38e-04

Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities.


Pssm-ID: 404492 [Multi-domain]  Cd Length: 30  Bit Score: 40.71  E-value: 1.38e-04
                           10        20        30
                   ....*....|....*....|....*....|
gi 1907073056  638 NGYTPLHIAAKKNQMDIATSLLEYGADANA 667
Cdd:pfam13606    1 DGNTPLHLAARNGNLEIVKLLLERGADINA 30
TRPV3 cd22194
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), type 3; TRPV3 is a ...
630-791 1.84e-04

Transient Receptor Potential channel, Vanilloid subfamily (TRPV), type 3; TRPV3 is a temperature-sensitive Transient Receptor Potential (TRP) ion channel that is activated by warm temperatures, synthetic small-molecule chemicals, and natural compounds from plants. TRPV3 function is regulated by physiological factors such as extracellular divalent cations and acidic pH, intracellular adenosine triphosphate, membrane voltage, and arachidonic acid. It is expressed in both neuronal and non-neuronal tissues including epidermal keratinocytes, epithelial cells in the gut, endothelial cells in blood vessels, and neurons in dorsal root ganglia and CNS. TRPV3 null mice have abnormal hair morphogenesis and compromised skin barrier function. It may play roles in inflammatory skin disorders, such as itch and pain sensation. TRPV3 is also expressed by many neuronal and non-neuronal tissues, showing that TRPV3 might play roles in other unknown cellular and physiological functions. TRPV3 belongs to the vanilloid TRP subfamily (TRPV), named after the founding member vanilloid receptor 1 (TRPV1). The structure of TRPV shows the typical topology features of all TRP ion channel family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6 and large intracellular N- and C-terminal domains.


Pssm-ID: 411978 [Multi-domain]  Cd Length: 680  Bit Score: 46.29  E-value: 1.84e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  630 ASPHAAAKNGYTPLHIAAKKNQMDIATSLLEYGADANAVTRQ--------------GIASVHLAAQEGHVDMVSLLLSRN 695
Cdd:cd22194    132 AEYTEEAYEGQTALNIAIERRQGDIVKLLIAKGADVNAHAKGvffnpkykhegfyfGETPLALAACTNQPEIVQLLMEKE 211
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  696 ANVNLSNKS-GLTPLHLAaqedrVNVAEVLVNQGAHVdaqtkmgytplhvgchygnIKIVNFLLQHSAKVNAKT---KNG 771
Cdd:cd22194    212 STDITSQDSrGNTVLHAL-----VTVAEDSKTQNDFV-------------------KRMYDMILLKSENKNLETirnNEG 267
                          170       180
                   ....*....|....*....|
gi 1907073056  772 YTALHQAAQQGHTHIINVLL 791
Cdd:cd22194    268 LTPLQLAAKMGKAEILKYIL 287
ANK smart00248
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four ...
638-667 2.25e-04

ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.


Pssm-ID: 197603 [Multi-domain]  Cd Length: 30  Bit Score: 39.88  E-value: 2.25e-04
                            10        20        30
                    ....*....|....*....|....*....|
gi 1907073056   638 NGYTPLHIAAKKNQMDIATSLLEYGADANA 667
Cdd:smart00248    1 DGRTPLHLAAENGNLEVVKLLLDKGADINA 30
Ank_5 pfam13857
Ankyrin repeats (many copies);
327-382 2.26e-04

Ankyrin repeats (many copies);


Pssm-ID: 433530 [Multi-domain]  Cd Length: 56  Bit Score: 40.79  E-value: 2.26e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1907073056  327 MLLDRSAPILSKTKNGLSPLHMATQGDHLNCVQLLLQHNVPVDDVTNDYLTALHVA 382
Cdd:pfam13857    1 LLEHGPIDLNRLDGEGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEGLTALDLA 56
PHA02859 PHA02859
ankyrin repeat protein; Provisional
278-452 2.33e-04

ankyrin repeat protein; Provisional


Pssm-ID: 165195 [Multi-domain]  Cd Length: 209  Bit Score: 44.42  E-value: 2.33e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  278 TPLH--VASKRGNANMVKLLLDRGAKIDAKTRD-GLTPLH---CGARSGHEQVVEMLLDRSAPILSKTKNGLSPLHMatq 351
Cdd:PHA02859    53 TPIFscLEKDKVNVEILKFLIENGADVNFKTRDnNLSALHhylSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHM--- 129
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  352 gdhlncvqlllqhnvpvddvtndYLTALHVaahcgHYKVAKVLLDKKASPNAKALNGFTPLH-IACKKNRIRVMELLLKH 430
Cdd:PHA02859   130 -----------------------YMCNFNV-----RINVIKLLIDSGVSFLNKDFDNNNILYsYILFHSDKKIFDFLTSL 181
                          170       180
                   ....*....|....*....|..
gi 1907073056  431 GASIQAVTESGLTPIHVAAFMG 452
Cdd:PHA02859   182 GIDINETNKSGYNCYDLIKFRN 203
ANK smart00248
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four ...
770-799 2.36e-04

ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.


Pssm-ID: 197603 [Multi-domain]  Cd Length: 30  Bit Score: 39.88  E-value: 2.36e-04
                            10        20        30
                    ....*....|....*....|....*....|
gi 1907073056   770 NGYTALHQAAQQGHTHIINVLLQNNASPNE 799
Cdd:smart00248    1 DGRTPLHLAAENGNLEVVKLLLDKGADINA 30
PHA02884 PHA02884
ankyrin repeat protein; Provisional
684-803 2.36e-04

ankyrin repeat protein; Provisional


Pssm-ID: 165212 [Multi-domain]  Cd Length: 300  Bit Score: 45.36  E-value: 2.36e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  684 HVDMVSLLLSRNANVN----LSNKSGLTPLHLAAQEDRVNVAEVLVNQGAHVDAQTK-MGYTPLHVGCHYGNIKIVNFLL 758
Cdd:PHA02884    45 YTDIIDAILKLGADPEapfpLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEeAKITPLYISVLHGCLKCLEILL 124
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|
gi 1907073056  759 QHSAKVNAKTKNGYTALHQAAQQGHTHIINVLLQNNAS-----PNELTVN 803
Cdd:PHA02884   125 SYGADINIQTNDMVTPIELALMICNNFLAFMICDNEISnfykhPKKILIN 174
TRPV2 cd22197
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), type 2; TRPV2 is closely ...
606-720 2.41e-04

Transient Receptor Potential channel, Vanilloid subfamily (TRPV), type 2; TRPV2 is closely related to TRPV1, sharing high sequence identity (>50%), but TRPV2 shows a higher temperature threshold and sensitivity for activation than TRPV1. TRPV2 can be stimulated by ligands or lipids, and is involved in osmosensation and mechanosensation. TRPV2 is expressed in both neuronal and non-neuronal tissues, and it has been implicated in diverse physiological and pathophysiological processes, including cardiac-structure maintenance, innate immunity, and cancer. TRPV2 belongs to the vanilloid TRP subfamily (TRPV), named after the founding member vanilloid receptor 1 (TRPV1). The structure of TRPV shows the typical topology features of all Transient Receptor Potential (TRP) ion channel family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6 and large intracellular N- and C-terminal domains.


Pssm-ID: 411981 [Multi-domain]  Cd Length: 640  Bit Score: 46.00  E-value: 2.41e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  606 GLTPLHVAAHYDNQKVALLLLDQGASPHAAA------KN-------GYTPLHIAAKKNQMDIATSLLEYGADANAVTRQG 672
Cdd:cd22197     94 GHSALHIAIEKRSLQCVKLLVENGADVHARAcgrffqKKqgtcfyfGELPLSLAACTKQWDVVNYLLENPHQPASLQAQD 173
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907073056  673 ------------IASVHLAAQEGHVDMVSLLLSRNANVN-------LSNKSGLTPLHLAAQEDRVNV 720
Cdd:cd22197    174 slgntvlhalvmIADNSPENSALVIKMYDGLLQAGARLCptvqleeISNHEGLTPLKLAAKEGKIEI 240
PHA02859 PHA02859
ankyrin repeat protein; Provisional
67-165 2.63e-04

ankyrin repeat protein; Provisional


Pssm-ID: 165195 [Multi-domain]  Cd Length: 209  Bit Score: 44.42  E-value: 2.63e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056   67 VNICNQNGLNALH--LASKEGHVEVVSELLQREANVDAATKKGNTALHIASLA----GQAEVVKVLVTNGANVNAQSQNG 140
Cdd:PHA02859    44 VNDCNDLYETPIFscLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYLSfnknVEPEILKILIDSGSSITEEDEDG 123
                           90       100
                   ....*....|....*....|....*..
gi 1907073056  141 FTPL--YMAAQENHLEVVRFLLDNGAS 165
Cdd:PHA02859   124 KNLLhmYMCNFNVRINVIKLLIDSGVS 150
PHA02989 PHA02989
ankyrin repeat protein; Provisional
258-473 2.78e-04

ankyrin repeat protein; Provisional


Pssm-ID: 222954 [Multi-domain]  Cd Length: 494  Bit Score: 45.50  E-value: 2.78e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  258 VATLLLNRAAAVDFTARNDITPLHV---ASKRGNANMVKLLLDRGAKI-DAKTRDGLTPLH-----CGARsghEQVVEML 328
Cdd:PHA02989    90 IVKLLLKFGADINLKTFNGVSPIVCfiyNSNINNCDMLRFLLSKGINVnDVKNSRGYNLLHmylesFSVK---KDVIKIL 166
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  329 LDRSAPILSKTK-NGLSPLHMATQGD----HLNCVQLLLQHNVPVDDVTNDYLTAL------HVAAHCGHYKVAKVLLdK 397
Cdd:PHA02989   167 LSFGVNLFEKTSlYGLTPMNIYLRNDidviSIKVIKYLIKKGVNIETNNNGSESVLesfldnNKILSKKEFKVLNFIL-K 245
                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907073056  398 KASPNAKALNGFTPLHIACKKNRIRVMELLLKHGASIQAVTESGLTPIHVAAFMGHVNIVSQLMhhGASPNTTNVR 473
Cdd:PHA02989   246 YIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRIL--QLKPGKYLIK 319
PHA02791 PHA02791
ankyrin-like protein; Provisional
238-434 2.79e-04

ankyrin-like protein; Provisional


Pssm-ID: 165154 [Multi-domain]  Cd Length: 284  Bit Score: 45.03  E-value: 2.79e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  238 RATESGFTPLHIAAHYGNINVATLLLNrAAAVDFTARNDItPLHVASKRGNANMVKLLLDRGAKIDAKTRDGLTPLHCGA 317
Cdd:PHA02791    25 KADVHGHSALYYAIADNNVRLVCTLLN-AGALKNLLENEF-PLHQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAV 102
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  318 RSGHEQVVEMLLDRSAPILSKTKNGL-SPLHMATQGDHLNCVQLLLQHnVPVDDVTNDYLTALHVAAHCGHYKVAKVLLD 396
Cdd:PHA02791   103 DSGNMQTVKLFVKKNWRLMFYGKTGWkTSFYHAVMLNDVSIVSYFLSE-IPSTFDLAILLSCIHITIKNGHVDMMILLLD 181
                          170       180       190
                   ....*....|....*....|....*....|....*....
gi 1907073056  397 KKASPNAKALNGFTP-LHIACKKNRIRVMELLLKHGASI 434
Cdd:PHA02791   182 YMTSTNTNNSLLFIPdIKLAIDNKDLEMLQALFKYDINI 220
PHA02859 PHA02859
ankyrin repeat protein; Provisional
121-181 2.91e-04

ankyrin repeat protein; Provisional


Pssm-ID: 165195 [Multi-domain]  Cd Length: 209  Bit Score: 44.04  E-value: 2.91e-04
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1907073056  121 EVVKVLVTNGANVNAQSQ-NGFTPL--YMAAQEN-HLEVVRFLLDNGASQSLATEDGFTPLAVAL 181
Cdd:PHA02859    67 EILKFLIENGADVNFKTRdNNLSALhhYLSFNKNvEPEILKILIDSGSSITEEDEDGKNLLHMYM 131
Ank_3 pfam13606
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ...
473-502 3.16e-04

Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities.


Pssm-ID: 404492 [Multi-domain]  Cd Length: 30  Bit Score: 39.55  E-value: 3.16e-04
                           10        20        30
                   ....*....|....*....|....*....|
gi 1907073056  473 RGETALHMAARSGQAEVVRYLVQDGAQVEA 502
Cdd:pfam13606    1 DGNTPLHLAARNGNLEIVKLLLERGADINA 30
ANK smart00248
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four ...
374-403 3.33e-04

ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.


Pssm-ID: 197603 [Multi-domain]  Cd Length: 30  Bit Score: 39.49  E-value: 3.33e-04
                            10        20        30
                    ....*....|....*....|....*....|
gi 1907073056   374 DYLTALHVAAHCGHYKVAKVLLDKKASPNA 403
Cdd:smart00248    1 DGRTPLHLAAENGNLEVVKLLLDKGADINA 30
ANK smart00248
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four ...
473-502 3.42e-04

ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.


Pssm-ID: 197603 [Multi-domain]  Cd Length: 30  Bit Score: 39.49  E-value: 3.42e-04
                            10        20        30
                    ....*....|....*....|....*....|
gi 1907073056   473 RGETALHMAARSGQAEVVRYLVQDGAQVEA 502
Cdd:smart00248    1 DGRTPLHLAAENGNLEVVKLLLDKGADINA 30
Ank_5 pfam13857
Ankyrin repeats (many copies);
236-283 3.63e-04

Ankyrin repeats (many copies);


Pssm-ID: 433530 [Multi-domain]  Cd Length: 56  Bit Score: 40.02  E-value: 3.63e-04
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*...
gi 1907073056  236 VNRATESGFTPLHIAAHYGNINVATLLLNRAAAVDFTARNDITPLHVA 283
Cdd:pfam13857    9 LNRLDGEGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEGLTALDLA 56
ANK smart00248
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four ...
73-102 3.63e-04

ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.


Pssm-ID: 197603 [Multi-domain]  Cd Length: 30  Bit Score: 39.49  E-value: 3.63e-04
                            10        20        30
                    ....*....|....*....|....*....|
gi 1907073056    73 NGLNALHLASKEGHVEVVSELLQREANVDA 102
Cdd:smart00248    1 DGRTPLHLAAENGNLEVVKLLLDKGADINA 30
Ank pfam00023
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ...
473-505 3.95e-04

Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity.


Pssm-ID: 425426 [Multi-domain]  Cd Length: 34  Bit Score: 39.58  E-value: 3.95e-04
                           10        20        30
                   ....*....|....*....|....*....|....
gi 1907073056  473 RGETALHMAA-RSGQAEVVRYLVQDGAQVEAKAK 505
Cdd:pfam00023    1 DGNTPLHLAAgRRGNLEIVKLLLSKGADVNARDK 34
Ank pfam00023
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ...
441-471 4.85e-04

Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity.


Pssm-ID: 425426 [Multi-domain]  Cd Length: 34  Bit Score: 39.20  E-value: 4.85e-04
                           10        20        30
                   ....*....|....*....|....*....|..
gi 1907073056  441 GLTPIHVAAFM-GHVNIVSQLMHHGASPNTTN 471
Cdd:pfam00023    2 GNTPLHLAAGRrGNLEIVKLLLSKGADVNARD 33
PHA03095 PHA03095
ankyrin-like protein; Provisional
58-111 4.99e-04

ankyrin-like protein; Provisional


Pssm-ID: 222980 [Multi-domain]  Cd Length: 471  Bit Score: 44.63  E-value: 4.99e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1907073056   58 LDYIKNGVDVNICNQNGLNALHLASKEGHVEVVSELLQREANVDAATKKGNTAL 111
Cdd:PHA03095   241 LPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPL 294
Death_NMPP84 cd08318
Death domain of Nuclear Matrix Protein P84; Death domain (DD) found in the Nuclear Matrix ...
1495-1571 5.03e-04

Death domain of Nuclear Matrix Protein P84; Death domain (DD) found in the Nuclear Matrix Protein P84 (also known as HPR1 or THOC1). HPR1/p84 resides in the nuclear matrix and is part of the THO complex, also called TREX (transcription/export) complex, which functions in mRNP biogenesis at the interface between transcription and export of mRNA from the nucleus. Mice lacking THOC1 have abnormal testis development and are sterile. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.


Pssm-ID: 260030  Cd Length: 86  Bit Score: 40.58  E-value: 5.03e-04
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907073056 1495 TDIRMAIVADHLGLSWTELARELNFSVDEINQIRvENPNSLISQSFMLLKKWVTRDGKNATTDALTSVLTKINRIDI 1571
Cdd:cd08318      6 TSEQIDVLANKLGEQWKTLAPYLEMKDKDIRQIE-SDSEDMKMRAKQLLVTWQDREGAQATPEILMTALNAAGLNEI 81
Ank pfam00023
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ...
377-404 5.15e-04

Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity.


Pssm-ID: 425426 [Multi-domain]  Cd Length: 34  Bit Score: 39.20  E-value: 5.15e-04
                           10        20
                   ....*....|....*....|....*....
gi 1907073056  377 TALHVAA-HCGHYKVAKVLLDKKASPNAK 404
Cdd:pfam00023    4 TPLHLAAgRRGNLEIVKLLLSKGADVNAR 32
Ank pfam00023
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ...
770-798 5.36e-04

Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity.


Pssm-ID: 425426 [Multi-domain]  Cd Length: 34  Bit Score: 39.20  E-value: 5.36e-04
                           10        20        30
                   ....*....|....*....|....*....|
gi 1907073056  770 NGYTALHQAAQQ-GHTHIINVLLQNNASPN 798
Cdd:pfam00023    1 DGNTPLHLAAGRrGNLEIVKLLLSKGADVN 30
Ank pfam00023
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ...
705-736 5.52e-04

Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity.


Pssm-ID: 425426 [Multi-domain]  Cd Length: 34  Bit Score: 39.20  E-value: 5.52e-04
                           10        20        30
                   ....*....|....*....|....*....|...
gi 1907073056  705 GLTPLHLAA-QEDRVNVAEVLVNQGAHVDAQTK 736
Cdd:pfam00023    2 GNTPLHLAAgRRGNLEIVKLLLSKGADVNARDK 34
PHA02736 PHA02736
Viral ankyrin protein; Provisional
377-432 5.88e-04

Viral ankyrin protein; Provisional


Pssm-ID: 165103 [Multi-domain]  Cd Length: 154  Bit Score: 42.17  E-value: 5.88e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 1907073056  377 TALHVAAHCGHYKVAKVLLdKKASPNAKALNGF--TPLHIACKKNRIRVMELLLKHGA 432
Cdd:PHA02736    94 TPLHIAVYTQNYELATWLC-NQPGVNMEILNYAfkTPYYVACERHDAKMMNILRAKGA 150
Ank pfam00023
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ...
308-340 5.97e-04

Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity.


Pssm-ID: 425426 [Multi-domain]  Cd Length: 34  Bit Score: 38.81  E-value: 5.97e-04
                           10        20        30
                   ....*....|....*....|....*....|....
gi 1907073056  308 DGLTPLHCGA-RSGHEQVVEMLLDRSAPILSKTK 340
Cdd:pfam00023    1 DGNTPLHLAAgRRGNLEIVKLLLSKGADVNARDK 34
Ank pfam00023
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ...
506-537 6.15e-04

Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity.


Pssm-ID: 425426 [Multi-domain]  Cd Length: 34  Bit Score: 38.81  E-value: 6.15e-04
                           10        20        30
                   ....*....|....*....|....*....|...
gi 1907073056  506 DDQTPLHISA-RLGKADIVQQLLQQGASPNAAT 537
Cdd:pfam00023    1 DGNTPLHLAAgRRGNLEIVKLLLSKGADVNARD 33
PHA02741 PHA02741
hypothetical protein; Provisional
471-580 6.53e-04

hypothetical protein; Provisional


Pssm-ID: 165108 [Multi-domain]  Cd Length: 169  Bit Score: 42.34  E-value: 6.53e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  471 NVRGETALHMAARSGQAEVVR----YLVQDGAQVEAKAKDD--QTPLHISARLGKA----DIVQQLLQQGASPNAATT-S 539
Cdd:PHA02741    18 NSEGENFFHEAARCGCFDIIArftpFIRGDCHAAALNATDDagQMCIHIAAEKHEAqlaaEIIDHLIELGADINAQEMlE 97
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|..
gi 1907073056  540 GYTPLHLAAREGHEDVAAFLLDH-GASLSITTKKGFTPLHVA 580
Cdd:PHA02741    98 GDTALHLAAHRRDHDLAEWLCCQpGIDLHFCNADNKSPFELA 139
ANK smart00248
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four ...
441-468 7.08e-04

ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.


Pssm-ID: 197603 [Multi-domain]  Cd Length: 30  Bit Score: 38.72  E-value: 7.08e-04
                            10        20
                    ....*....|....*....|....*...
gi 1907073056   441 GLTPIHVAAFMGHVNIVSQLMHHGASPN 468
Cdd:smart00248    2 GRTPLHLAAENGNLEVVKLLLDKGADIN 29
PHA02741 PHA02741
hypothetical protein; Provisional
71-194 7.81e-04

hypothetical protein; Provisional


Pssm-ID: 165108 [Multi-domain]  Cd Length: 169  Bit Score: 42.34  E-value: 7.81e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056   71 NQNGLNALHLASKEGHVEVVSELL------QREANVDAATKKGNTALHIASLAGQA----EVVKVLVTNGANVNAQ-SQN 139
Cdd:PHA02741    18 NSEGENFFHEAARCGCFDIIARFTpfirgdCHAAALNATDDAGQMCIHIAAEKHEAqlaaEIIDHLIELGADINAQeMLE 97
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1907073056  140 GFTPLYMAAQENHLEVVRFLL-DNGASQSLATEDGFTPLAVALQQGHDQVVSLLLE 194
Cdd:PHA02741    98 GDTALHLAAHRRDHDLAEWLCcQPGIDLHFCNADNKSPFELAIDNEDVAMMQILRE 153
Ank_3 pfam13606
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ...
106-135 7.88e-04

Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities.


Pssm-ID: 404492 [Multi-domain]  Cd Length: 30  Bit Score: 38.40  E-value: 7.88e-04
                           10        20        30
                   ....*....|....*....|....*....|
gi 1907073056  106 KGNTALHIASLAGQAEVVKVLVTNGANVNA 135
Cdd:pfam13606    1 DGNTPLHLAARNGNLEIVKLLLERGADINA 30
PHA02884 PHA02884
ankyrin repeat protein; Provisional
577-679 7.98e-04

ankyrin repeat protein; Provisional


Pssm-ID: 165212 [Multi-domain]  Cd Length: 300  Bit Score: 43.82  E-value: 7.98e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  577 LHVAAKYGKLEVASLLLQKSASPDA----AGKSGLTPLHVAAHYDNQKVALLLLDQGASPHAAAKNG-YTPLHIAAKKNQ 651
Cdd:PHA02884    37 LYSSIKFHYTDIIDAILKLGADPEApfplSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAkITPLYISVLHGC 116
                           90       100
                   ....*....|....*....|....*...
gi 1907073056  652 MDIATSLLEYGADANAVTRQGIASVHLA 679
Cdd:PHA02884   117 LKCLEILLSYGADINIQTNDMVTPIELA 144
PHA02859 PHA02859
ankyrin repeat protein; Provisional
236-347 8.29e-04

ankyrin repeat protein; Provisional


Pssm-ID: 165195 [Multi-domain]  Cd Length: 209  Bit Score: 42.88  E-value: 8.29e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  236 VNRATESGFTPLH--IAAHYGNINVATLLLNRAAAVDFTAR-NDITPLH---VASKRGNANMVKLLLDRGAKIDAKTRDG 309
Cdd:PHA02859    44 VNDCNDLYETPIFscLEKDKVNVEILKFLIENGADVNFKTRdNNLSALHhylSFNKNVEPEILKILIDSGSSITEEDEDG 123
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|...
gi 1907073056  310 LTPLH-----CGARSgheQVVEMLLDRSAPILSKTKNGLSPLH 347
Cdd:PHA02859   124 KNLLHmymcnFNVRI---NVIKLLIDSGVSFLNKDFDNNNILY 163
ANK smart00248
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four ...
243-270 1.23e-03

ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.


Pssm-ID: 197603 [Multi-domain]  Cd Length: 30  Bit Score: 37.95  E-value: 1.23e-03
                            10        20
                    ....*....|....*....|....*...
gi 1907073056   243 GFTPLHIAAHYGNINVATLLLNRAAAVD 270
Cdd:smart00248    2 GRTPLHLAAENGNLEVVKLLLDKGADIN 29
Ank_3 pfam13606
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ...
770-799 1.27e-03

Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities.


Pssm-ID: 404492 [Multi-domain]  Cd Length: 30  Bit Score: 38.01  E-value: 1.27e-03
                           10        20        30
                   ....*....|....*....|....*....|
gi 1907073056  770 NGYTALHQAAQQGHTHIINVLLQNNASPNE 799
Cdd:pfam13606    1 DGNTPLHLAARNGNLEIVKLLLERGADINA 30
PHA02741 PHA02741
hypothetical protein; Provisional
633-724 1.35e-03

hypothetical protein; Provisional


Pssm-ID: 165108 [Multi-domain]  Cd Length: 169  Bit Score: 41.57  E-value: 1.35e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  633 HAAAKN-----GYTPLHIAAKKNQMDIATS----LLEYGADANAVTR-QGIASVHLAAQEGHVDMVSLLLSR-NANVNLS 701
Cdd:PHA02741    49 HAAALNatddaGQMCIHIAAEKHEAQLAAEiidhLIELGADINAQEMlEGDTALHLAAHRRDHDLAEWLCCQpGIDLHFC 128
                           90       100
                   ....*....|....*....|...
gi 1907073056  702 NKSGLTPLHLAAQEDRVNVAEVL 724
Cdd:PHA02741   129 NADNKSPFELAIDNEDVAMMQIL 151
PHA02716 PHA02716
CPXV016; CPX019; EVM010; Provisional
669-823 1.43e-03

CPXV016; CPX019; EVM010; Provisional


Pssm-ID: 165089 [Multi-domain]  Cd Length: 764  Bit Score: 43.75  E-value: 1.43e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  669 TRQGIASVHLAAQEGHVDMVSLLLSRNANVNLSNKSGLTPLHLAAQEDRV--NVAEVLVNQGAHVDAQTKMGYTP----- 741
Cdd:PHA02716   176 TGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVcaSVIKKIIELGGDMDMKCVNGMSPimtyi 255
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  742 ------------LHVGCHYGN--------------------IKIVNFLLQHSAKVNAKTKNGYTALHQAAQQGH--THII 787
Cdd:PHA02716   256 inidninpeitnIYIESLDGNkvknipmilhsyitlarnidISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNisTDII 335
                          170       180       190
                   ....*....|....*....|....*....|....*.
gi 1907073056  788 NVLLQNNASPNELTVNGNTALAIarRLGYISVVDTL 823
Cdd:PHA02716   336 KLLHEYGNDLNEPDNIGNTVLHT--YLSMLSVVNIL 369
Ank pfam00023
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ...
341-373 1.46e-03

Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity.


Pssm-ID: 425426 [Multi-domain]  Cd Length: 34  Bit Score: 37.65  E-value: 1.46e-03
                           10        20        30
                   ....*....|....*....|....*....|....
gi 1907073056  341 NGLSPLHMA-TQGDHLNCVQLLLQHNVPVDDVTN 373
Cdd:pfam00023    1 DGNTPLHLAaGRRGNLEIVKLLLSKGADVNARDK 34
Ank_3 pfam13606
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ...
139-165 1.55e-03

Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities.


Pssm-ID: 404492 [Multi-domain]  Cd Length: 30  Bit Score: 37.63  E-value: 1.55e-03
                           10        20
                   ....*....|....*....|....*..
gi 1907073056  139 NGFTPLYMAAQENHLEVVRFLLDNGAS 165
Cdd:pfam13606    1 DGNTPLHLAARNGNLEIVKLLLERGAD 27
Ank_3 pfam13606
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ...
572-601 1.55e-03

Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities.


Pssm-ID: 404492 [Multi-domain]  Cd Length: 30  Bit Score: 37.63  E-value: 1.55e-03
                           10        20        30
                   ....*....|....*....|....*....|
gi 1907073056  572 KGFTPLHVAAKYGKLEVASLLLQKSASPDA 601
Cdd:pfam13606    1 DGNTPLHLAARNGNLEIVKLLLERGADINA 30
trp TIGR00870
transient-receptor-potential calcium channel protein; The Transient Receptor Potential Ca2+ ...
639-819 1.67e-03

transient-receptor-potential calcium channel protein; The Transient Receptor Potential Ca2+ Channel (TRP-CC) Family (TC. 1.A.4)The TRP-CC family has also been called the store-operated calcium channel (SOC) family. The prototypical members include the Drosophila retinal proteinsTRP and TRPL (Montell and Rubin, 1989; Hardie and Minke, 1993). SOC members of the family mediate the entry of extracellular Ca2+ into cells in responseto depletion of intracellular Ca2+ stores (Clapham, 1996) and agonist stimulated production of inositol-1,4,5 trisphosphate (IP3). One member of the TRP-CCfamily, mammalian Htrp3, has been shown to form a tight complex with the IP3 receptor (TC #1.A.3.2.1). This interaction is apparently required for IP3 tostimulate Ca2+ release via Htrp3. The vanilloid receptor subtype 1 (VR1), which is the receptor for capsaicin (the ?hot? ingredient in chili peppers) and servesas a heat-activated ion channel in the pain pathway (Caterina et al., 1997), is also a member of this family. The stretch-inhibitable non-selective cation channel(SIC) is identical to the vanilloid receptor throughout all of its first 700 residues, but it exhibits a different sequence in its last 100 residues. VR1 and SICtransport monovalent cations as well as Ca2+. VR1 is about 10x more permeable to Ca2+ than to monovalent ions. Ca2+ overload probably causes cell deathafter chronic exposure to capsaicin. (McCleskey and Gold, 1999). [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273311 [Multi-domain]  Cd Length: 743  Bit Score: 43.53  E-value: 1.67e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  639 GYTPLHIAAKKNQMDIATSLLEYGADANAVtrqGIASVHLAAqEGHVDMVSLLLS-------RNANVNLSNKS------- 704
Cdd:TIGR00870   52 GRSALFVAAIENENLELTELLLNLSCRGAV---GDTLLHAIS-LEYVDAVEAILLhllaafrKSGPLELANDQytseftp 127
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  705 GLTPLHLAAQEDRVNVAEVLVNQGAHVDAQTKMG---YTPlHVGCHY------------GNIKIVNFLLQHSAKVNAKTK 769
Cdd:TIGR00870  128 GITALHLAAHRQNYEIVKLLLERGASVPARACGDffvKSQ-GVDSFYhgesplnaaaclGSPSIVALLSEDPADILTADS 206
                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907073056  770 NGYTALHQAAQQGH---------THIINVLLQNNA---SPNELTV----NGNTALAIARRLGYISV 819
Cdd:TIGR00870  207 LGNTLLHLLVMENEfkaeyeelsCQMYNFALSLLDklrDSKELEVilnhQGLTPLKLAAKEGRIVL 272
Ank_3 pfam13606
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ...
374-403 1.87e-03

Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities.


Pssm-ID: 404492 [Multi-domain]  Cd Length: 30  Bit Score: 37.24  E-value: 1.87e-03
                           10        20        30
                   ....*....|....*....|....*....|
gi 1907073056  374 DYLTALHVAAHCGHYKVAKVLLDKKASPNA 403
Cdd:pfam13606    1 DGNTPLHLAARNGNLEIVKLLLERGADINA 30
Ank pfam00023
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ...
606-634 2.04e-03

Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity.


Pssm-ID: 425426 [Multi-domain]  Cd Length: 34  Bit Score: 37.27  E-value: 2.04e-03
                           10        20        30
                   ....*....|....*....|....*....|
gi 1907073056  606 GLTPLHVAA-HYDNQKVALLLLDQGASPHA 634
Cdd:pfam00023    2 GNTPLHLAAgRRGNLEIVKLLLSKGADVNA 31
PTZ00322 PTZ00322
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
754-823 2.10e-03

6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional


Pssm-ID: 140343 [Multi-domain]  Cd Length: 664  Bit Score: 42.96  E-value: 2.10e-03
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  754 VNFLLQHSAKVNAKTKNGYTALHQAAQQGHTHIINVLLQNNASPNELTVNGNTALAIARRLGYISVVDTL 823
Cdd:PTZ00322    98 ARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLL 167
ANK smart00248
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four ...
506-535 2.54e-03

ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.


Pssm-ID: 197603 [Multi-domain]  Cd Length: 30  Bit Score: 37.18  E-value: 2.54e-03
                            10        20        30
                    ....*....|....*....|....*....|
gi 1907073056   506 DDQTPLHISARLGKADIVQQLLQQGASPNA 535
Cdd:smart00248    1 DGRTPLHLAAENGNLEVVKLLLDKGADINA 30
Ank_3 pfam13606
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ...
506-535 2.56e-03

Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities.


Pssm-ID: 404492 [Multi-domain]  Cd Length: 30  Bit Score: 36.86  E-value: 2.56e-03
                           10        20        30
                   ....*....|....*....|....*....|
gi 1907073056  506 DDQTPLHISARLGKADIVQQLLQQGASPNA 535
Cdd:pfam13606    1 DGNTPLHLAARNGNLEIVKLLLERGADINA 30
TRPV2 cd22197
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), type 2; TRPV2 is closely ...
639-792 2.60e-03

Transient Receptor Potential channel, Vanilloid subfamily (TRPV), type 2; TRPV2 is closely related to TRPV1, sharing high sequence identity (>50%), but TRPV2 shows a higher temperature threshold and sensitivity for activation than TRPV1. TRPV2 can be stimulated by ligands or lipids, and is involved in osmosensation and mechanosensation. TRPV2 is expressed in both neuronal and non-neuronal tissues, and it has been implicated in diverse physiological and pathophysiological processes, including cardiac-structure maintenance, innate immunity, and cancer. TRPV2 belongs to the vanilloid TRP subfamily (TRPV), named after the founding member vanilloid receptor 1 (TRPV1). The structure of TRPV shows the typical topology features of all Transient Receptor Potential (TRP) ion channel family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6 and large intracellular N- and C-terminal domains.


Pssm-ID: 411981 [Multi-domain]  Cd Length: 640  Bit Score: 42.53  E-value: 2.60e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  639 GYTPLHIAAKKNQMDIATSLLEYGADanavtrqgiasVHLAAqEGHvdmvslLLSRNANVnlSNKSGLTPLHLAAQEDRV 718
Cdd:cd22197     94 GHSALHIAIEKRSLQCVKLLVENGAD-----------VHARA-CGR------FFQKKQGT--CFYFGELPLSLAACTKQW 153
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  719 NVAEVLVN---QGAHVDAQTKMGYTPLHVGCHYGN---------IKIVNFLLQHSAKVNAKTK-------NGYTALHQAA 779
Cdd:cd22197    154 DVVNYLLEnphQPASLQAQDSLGNTVLHALVMIADnspensalvIKMYDGLLQAGARLCPTVQleeisnhEGLTPLKLAA 233
                          170
                   ....*....|...
gi 1907073056  780 QQGHTHIINVLLQ 792
Cdd:cd22197    234 KEGKIEIFRHILQ 246
Ank_3 pfam13606
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ...
275-304 2.61e-03

Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities.


Pssm-ID: 404492 [Multi-domain]  Cd Length: 30  Bit Score: 36.86  E-value: 2.61e-03
                           10        20        30
                   ....*....|....*....|....*....|
gi 1907073056  275 NDITPLHVASKRGNANMVKLLLDRGAKIDA 304
Cdd:pfam13606    1 DGNTPLHLAARNGNLEIVKLLLERGADINA 30
PHA02859 PHA02859
ankyrin repeat protein; Provisional
390-514 2.70e-03

ankyrin repeat protein; Provisional


Pssm-ID: 165195 [Multi-domain]  Cd Length: 209  Bit Score: 41.34  E-value: 2.70e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  390 VAKVLLDKKASPNAKAL-NGFTPLH--IACKKN-RIRVMELLLKHGASIQAVTESGLTPIHV--AAFMGHVNIVSQLMHH 463
Cdd:PHA02859    68 ILKFLIENGADVNFKTRdNNLSALHhyLSFNKNvEPEILKILIDSGSSITEEDEDGKNLLHMymCNFNVRINVIKLLIDS 147
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|...
gi 1907073056  464 GASPNTTNVRGETALH--MAARSGQaEVVRYLVQDGAQVEAKAKDDQTPLHIS 514
Cdd:PHA02859   148 GVSFLNKDFDNNNILYsyILFHSDK-KIFDFLTSLGIDINETNKSGYNCYDLI 199
TRPV3 cd22194
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), type 3; TRPV3 is a ...
278-410 2.81e-03

Transient Receptor Potential channel, Vanilloid subfamily (TRPV), type 3; TRPV3 is a temperature-sensitive Transient Receptor Potential (TRP) ion channel that is activated by warm temperatures, synthetic small-molecule chemicals, and natural compounds from plants. TRPV3 function is regulated by physiological factors such as extracellular divalent cations and acidic pH, intracellular adenosine triphosphate, membrane voltage, and arachidonic acid. It is expressed in both neuronal and non-neuronal tissues including epidermal keratinocytes, epithelial cells in the gut, endothelial cells in blood vessels, and neurons in dorsal root ganglia and CNS. TRPV3 null mice have abnormal hair morphogenesis and compromised skin barrier function. It may play roles in inflammatory skin disorders, such as itch and pain sensation. TRPV3 is also expressed by many neuronal and non-neuronal tissues, showing that TRPV3 might play roles in other unknown cellular and physiological functions. TRPV3 belongs to the vanilloid TRP subfamily (TRPV), named after the founding member vanilloid receptor 1 (TRPV1). The structure of TRPV shows the typical topology features of all TRP ion channel family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6 and large intracellular N- and C-terminal domains.


Pssm-ID: 411978 [Multi-domain]  Cd Length: 680  Bit Score: 42.44  E-value: 2.81e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  278 TPLHVASKRGNANMVKLLLDRGAKIDAKTRD--------------GLTPLHCGARSGHEQVVEMLLDR-SAPILSKTKNG 342
Cdd:cd22194    143 TALNIAIERRQGDIVKLLIAKGADVNAHAKGvffnpkykhegfyfGETPLALAACTNQPEIVQLLMEKeSTDITSQDSRG 222
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  343 LSPLH-MATQGD----HLNCV-----QLLLQH-NVPVDDVTN-DYLTALHVAAHCGHYKVAKVLLDK--KASPNAKALNG 408
Cdd:cd22194    223 NTVLHaLVTVAEdsktQNDFVkrmydMILLKSeNKNLETIRNnEGLTPLQLAAKMGKAEILKYILSReiKEKPNRSLSRK 302

                   ..
gi 1907073056  409 FT 410
Cdd:cd22194    303 FT 304
ANK smart00248
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four ...
308-335 3.03e-03

ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.


Pssm-ID: 197603 [Multi-domain]  Cd Length: 30  Bit Score: 36.80  E-value: 3.03e-03
                            10        20
                    ....*....|....*....|....*...
gi 1907073056   308 DGLTPLHCGARSGHEQVVEMLLDRSAPI 335
Cdd:smart00248    1 DGRTPLHLAAENGNLEVVKLLLDKGADI 28
Death_MyD88 cd08312
Death domain of Myeloid Differentation primary response protein MyD88; Death Domain (DD) of ...
1492-1575 3.19e-03

Death domain of Myeloid Differentation primary response protein MyD88; Death Domain (DD) of Myeloid Differentiation primary response protein 88 (MyD88). MyD88 is an adaptor protein involved in interleukin-1 receptor (IL-1R)- and Toll-like receptor (TLR)-induced activation of nuclear factor-kappaB (NF-kB) and mitogen activated protein kinase pathways that lead to the induction of proinflammatory cytokines. It is a key component in the signaling pathway of pathogen recognition in the innate immune system. MyD88 contains an N-terminal DD and a C-terminal Toll/IL-1 Receptor (TIR) homology domain that mediates interaction with TLRs and IL-1R. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.


Pssm-ID: 260026  Cd Length: 79  Bit Score: 38.35  E-value: 3.19e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056 1492 CERTDIRMAIVADhlglsWTELARELNFSVDEINQI-RVENPnslisqSFMLLKKWVTRDgKNATTDALTSVLTKINRID 1570
Cdd:cd08312      6 SLYLNPEKVVAND-----WRGLAELMGFDYLEIRNFeRQSSP------TERLLEDWETRP-PGATVGNLLEILEELERKD 73

                   ....*
gi 1907073056 1571 IVTLL 1575
Cdd:cd08312     74 VLEDL 78
ANK smart00248
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four ...
341-370 3.59e-03

ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.


Pssm-ID: 197603 [Multi-domain]  Cd Length: 30  Bit Score: 36.80  E-value: 3.59e-03
                            10        20        30
                    ....*....|....*....|....*....|
gi 1907073056   341 NGLSPLHMATQGDHLNCVQLLLQHNVPVDD 370
Cdd:smart00248    1 DGRTPLHLAAENGNLEVVKLLLDKGADINA 30
TRPV cd21882
Transient Receptor Potential channel, Vanilloid subfamily (TRPV); The vanilloid TRP subfamily ...
153-331 3.60e-03

Transient Receptor Potential channel, Vanilloid subfamily (TRPV); The vanilloid TRP subfamily (TRPV), named after the vanilloid receptor 1 (TRPV1), consists of six members: four thermo-sensing channels (TRPV1, TRPV2, TRPV3, and TRPV4) and two Ca2+ selective channels (TRPV5 and TRPV6). The calcium-selective channels TRPV5 and TRPV6 can be heterotetramers and are important for general Ca2+ homeostasis. All four channels within the TRPV1-4 group show temperature-invoked currents when expressed in heterologous cell systems, ranging from activation at ~25C for TRPV4 to ~52C for TRPV2. The structure of TRPV shows the typical topology features of all Transient Receptor Potential (TRP) ion channel family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6 and large intracellular N- and C-terminal domains. The TRP family consists of membrane proteins that function as ion channels that communicate between the cell and its environment, by a vast array of physical or chemical stimuli, including radiation (in the form of temperature, infrared ,or light) and pressure (osmotic or mechanical). TRP channels are formed by a tetrameric complex of channel subunits. Based on sequence identity, the mammalian TRP channel family is classified into six subfamilies, with significant sequence similarity within the transmembrane domains, but very low similarity in their N- and C-terminal cytoplasmic regions. The six subfamilies are named based on their first member: TRPC (canonical), TRPV (vanilloid), TRPM (melastatin), TRPA (ankyrin), TRPML (mucolipin), and TRPP (polycystic).


Pssm-ID: 411975 [Multi-domain]  Cd Length: 600  Bit Score: 42.17  E-value: 3.60e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  153 LEVVRFLLDNGASQSLATedGFTPLAVA---LQQGHDQVVSLLLENDTKGKVRLP---------------ALHIAARKDD 214
Cdd:cd21882      8 LECLRWYLTDSAYQRGAT--GKTCLHKAalnLNDGVNEAIMLLLEAAPDSGNPKElvnapctdefyqgqtALHIAIENRN 85
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  215 TKAAALLLQNdtNADVESkmvvnRATESGFT------------PLHIAAHYGNINVATLLL-NRAAAVDFTARNDI--TP 279
Cdd:cd21882     86 LNLVRLLVEN--GADVSA-----RATGRFFRkspgnlfyfgelPLSLAACTNQEEIVRLLLeNGAQPAALEAQDSLgnTV 158
                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907073056  280 LHVASKRGN---------ANMVKLLLDRGAKID-------AKTRDGLTPLHCGARSGHEQVVEMLLDR 331
Cdd:cd21882    159 LHALVLQADntpensafvCQMYNLLLSYGAHLDptqqleeIPNHQGLTPLKLAAVEGKIVMFQHILQR 226
PHA02743 PHA02743
Viral ankyrin protein; Provisional
191-303 3.65e-03

Viral ankyrin protein; Provisional


Pssm-ID: 222925 [Multi-domain]  Cd Length: 166  Bit Score: 40.18  E-value: 3.65e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  191 LLLENDTKGKVrlpALHIAARKDDTKAA---ALLLQndTNADVESkmvvnRATESGFTPLHIAAHYGNINVATLLLnRAA 267
Cdd:PHA02743    49 LLHRYDHHGRQ---CTHMVAWYDRANAVmkiELLVN--MGADINA-----RELGTGNTLLHIAASTKNYELAEWLC-RQL 117
                           90       100       110
                   ....*....|....*....|....*....|....*...
gi 1907073056  268 AVDFTARNDI--TPLHVASKRGNANMVKLLLDRGAKID 303
Cdd:PHA02743   118 GVNLGAINYQheTAYHIAYKMRDRRMMEILRANGAVCD 155
Ank_3 pfam13606
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ...
308-335 4.36e-03

Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities.


Pssm-ID: 404492 [Multi-domain]  Cd Length: 30  Bit Score: 36.47  E-value: 4.36e-03
                           10        20
                   ....*....|....*....|....*...
gi 1907073056  308 DGLTPLHCGARSGHEQVVEMLLDRSAPI 335
Cdd:pfam13606    1 DGNTPLHLAARNGNLEIVKLLLERGADI 28
ANK smart00248
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four ...
677-700 5.21e-03

ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.


Pssm-ID: 197603 [Multi-domain]  Cd Length: 30  Bit Score: 36.03  E-value: 5.21e-03
                            10        20
                    ....*....|....*....|....
gi 1907073056   677 HLAAQEGHVDMVSLLLSRNANVNL 700
Cdd:smart00248    7 HLAAENGNLEVVKLLLDKGADINA 30
Ank pfam00023
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ...
243-270 6.26e-03

Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity.


Pssm-ID: 425426 [Multi-domain]  Cd Length: 34  Bit Score: 36.11  E-value: 6.26e-03
                           10        20
                   ....*....|....*....|....*....
gi 1907073056  243 GFTPLHIAA-HYGNINVATLLLNRAAAVD 270
Cdd:pfam00023    2 GNTPLHLAAgRRGNLEIVKLLLSKGADVN 30
ANK smart00248
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four ...
606-634 6.34e-03

ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.


Pssm-ID: 197603 [Multi-domain]  Cd Length: 30  Bit Score: 36.03  E-value: 6.34e-03
                            10        20
                    ....*....|....*....|....*....
gi 1907073056   606 GLTPLHVAAHYDNQKVALLLLDQGASPHA 634
Cdd:smart00248    2 GRTPLHLAAENGNLEVVKLLLDKGADINA 30
PHA02884 PHA02884
ankyrin repeat protein; Provisional
500-641 6.70e-03

ankyrin repeat protein; Provisional


Pssm-ID: 165212 [Multi-domain]  Cd Length: 300  Bit Score: 40.74  E-value: 6.70e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  500 VEAKAKDDQTP-LHISARLGKADIVQQLLQQGASPNA----ATTSGYTPLHLAAREGHEDVAAFLLDHGASLSITTKKG- 573
Cdd:PHA02884    25 IKKKNKICIANiLYSSIKFHYTDIIDAILKLGADPEApfplSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAk 104
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907073056  574 FTPLHVAAKYGKLEVASLLLQKSASPDAAGKSGLTPLHVAAHYDNQKVALLLLDQGASPHAAAKNGYT 641
Cdd:PHA02884   105 ITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMICDNEISNFYKHPKKIL 172
PHA02736 PHA02736
Viral ankyrin protein; Provisional
71-164 6.76e-03

Viral ankyrin protein; Provisional


Pssm-ID: 165103 [Multi-domain]  Cd Length: 154  Bit Score: 39.09  E-value: 6.76e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056   71 NQNGLNALHLASKEGHVEVVSE---LLQREANVDAATKK-GNTALHIASLAGQAEVVKVLVTN-GANVNAQSQNGFTPLY 145
Cdd:PHA02736    52 NRHGKQCVHIVSNPDKADPQEKlklLMEWGADINGKERVfGNTPLHIAVYTQNYELATWLCNQpGVNMEILNYAFKTPYY 131
                           90
                   ....*....|....*....
gi 1907073056  146 MAAQENHLEVVRFLLDNGA 164
Cdd:PHA02736   132 VACERHDAKMMNILRAKGA 150
PHA02884 PHA02884
ankyrin repeat protein; Provisional
245-341 6.87e-03

ankyrin repeat protein; Provisional


Pssm-ID: 165212 [Multi-domain]  Cd Length: 300  Bit Score: 40.74  E-value: 6.87e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  245 TPLHIAAHYGNINVATLLLNRAAAVD-FTARNDITPLHVASKRGNANMVKLLLDRGAKIDAKTRDGLTPLHCGARSGHEQ 323
Cdd:PHA02884    72 NPLIYAIDCDNDDAAKLLIRYGADVNrYAEEAKITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNF 151
                           90
                   ....*....|....*...
gi 1907073056  324 VVEMLLDRSAPILSKTKN 341
Cdd:PHA02884   152 LAFMICDNEISNFYKHPK 169
Death_RIP1 cd08777
Death Domain of Receptor-Interacting Protein 1; Death domain (DD) found in ...
1495-1575 8.28e-03

Death Domain of Receptor-Interacting Protein 1; Death domain (DD) found in Receptor-Interacting Protein 1 (RIP1) and related proteins. RIP kinases serve as essential sensors of cellular stress. Vertebrates contain several types containing a homologous N-terminal kinase domain and varying C-terminal domains. RIP1 harbors a C-terminal DD, which binds death receptors (DRs) including TNF receptor 1, Fas, TNF-related apoptosis-inducing ligand receptor 1 (TRAILR1), and TRAILR2. It also interacts with other DD-containing adaptor proteins such as TRADD and FADD. RIP1 plays a crucial role in determining a cell's fate, between survival or death, following exposure to stress signals. It is important in the signaling of NF-kappaB and MAPKs, and it links DR-associated signaling to reactive oxygen species (ROS) production. Abnormal RIP1 function may result in ROS accumulation affecting inflammatory responses, innate immunity, stress responses, and cell survival. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.


Pssm-ID: 260048  Cd Length: 86  Bit Score: 37.41  E-value: 8.28e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056 1495 TDIRMAIVADHLGLSWTELARELNFSVDEINQIRVE-NPNSLISQSFMLLKKWVTRDG-KNATTDALTSVLTKINRIDIV 1572
Cdd:cd08777      1 TEKHLDLLRENLGKKWKRCARRLGLTEVEIEEIDHDyERDGLKEKVHQMLEKWKMKEGsKGATVGKLAKALEGCIKSDLL 80

                   ...
gi 1907073056 1573 TLL 1575
Cdd:cd08777     81 VSL 83
Ank_3 pfam13606
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ...
243-270 8.34e-03

Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities.


Pssm-ID: 404492 [Multi-domain]  Cd Length: 30  Bit Score: 35.70  E-value: 8.34e-03
                           10        20
                   ....*....|....*....|....*...
gi 1907073056  243 GFTPLHIAAHYGNINVATLLLNRAAAVD 270
Cdd:pfam13606    2 GNTPLHLAARNGNLEIVKLLLERGADIN 29
TRPV4 cd22195
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), type 4; TRPV4 is expressed ...
473-588 8.69e-03

Transient Receptor Potential channel, Vanilloid subfamily (TRPV), type 4; TRPV4 is expressed broadly in neuronal and non-neuronal cells. It is activated by various stimuli, including hypo-osmolarity, warm temperature, and chemical ligands. TRPV4 acts in physiological functions such as osmoregulation and thermoregulation. It also has a role in mechanosensation in the vascular endothelium and urinary tract, and in cell barrier formation in vascular and epidermal tissues. Knockout mice studies suggested the functional importance of TRPV4 in the central nervous system, nociception, and bone formation. TRPV4 belongs to the vanilloid TRP subfamily (TRPV), named after the founding member vanilloid receptor 1 (TRPV1). The structure of TRPV shows the typical topology features of all Transient Receptor Potential (TRP) ion channel family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6 and large intracellular N- and C-terminal domains.


Pssm-ID: 411979 [Multi-domain]  Cd Length: 733  Bit Score: 40.99  E-value: 8.69e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907073056  473 RGETALHMAARSGQAEVVRYLVQDGAQVEAKA-------KDD-------QTPLHISARLGKADIVQQLLQQG---ASPNA 535
Cdd:cd22195    136 RGQTALHIAIERRCKHYVELLVEKGADVHAQArgrffqpKDEggyfyfgELPLSLAACTNQPDIVHYLTENAhkkADLRR 215
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907073056  536 ATTSGYTPLH-LAA-----REGHEDVAA---FLLDHGASL-------SITTKKGFTPLHVAAKYGKLEV 588
Cdd:cd22195    216 QDSRGNTVLHaLVAiadntRENTKFVTKmydLLLIKCAKLypdcnleAILNNDGMSPLMMAAKLGKIGI 284
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.20
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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